Synchronisation of breeding in populations of the brown mussel Perna perna on the South Coast of South Africa
- Authors: Ndzipa, Victoria
- Date: 2013-05-28
- Subjects: Mussels -- South Africa , Perna -- South Africa , Perna -- Breeding
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5830 , http://hdl.handle.net/10962/d1007857 , Mussels -- South Africa , Perna -- South Africa , Perna -- Breeding
- Description: The general biology and seasonality of breeding of intertidal populations of the brown mussel Perna perna in South Africa are reasonably well known, but we have little information on variability either within or among populations. Synchronous spawning offers adaptive advantages to externally breeding animals. Firstly, it enhances fertilization rates and therefore the species' reproductive fitness. Secondly, spawning can also be timed to coincide with environmental conditions conducive to larval settlement and development. In addition, synchronisation of spawning will influence the synchrony of settlement. Synchronisation of larval settlement, in turn, has implications for popUlation biology, as highly pulsed settlement is likely to lead to density-dependant mortality of recruits and uncoupling of adult/recruit densities, while poorly synchronised settlement will not. Generally, sea temperature and food availability are considered the key factors underlying the initiation and the duration of the breeding cycle of mussels. However, there are proximate local cues that trigger the proliferation, maturation and release of gametes. In this study, the hypothesis tested is that factors that control food availability affect gonad development and so influence synchrony among populations. Much of the published work on spawning is based on observations of the presence of larvae in the plankton, or on settlement. A more reliable method correlates the sequence of gonad development throughout the year with changes in length-weight relationships, using histology. This study is also designed to investigate temporal differences in the timing of the breeding cycle between sheltered and exposed sites along the south coast of South Africa by histological analysis of the reproductive tissue (the gonad) and by dry weight/shell length regreSSIOns. To do this, these two techniques were applied to six mussel populations at three III ocalities that were separated on scales of about 10-20km. Within each locality, two study sites were .dentified. One was exposed to strong wave action and one was sheltered. A few hundred meters ;eparated these sites. The first technique used length-weight regressions as an indication of mussel ~ondition. Abrupt decreases in the dry body weight of a hypothetical standard animal were taken to indicate periods of spawning. Regressions were assessed for samples of 40 mussels taken from each site at intervals of 4 weeks over 13 months. The results were analysed using a 3-way ANCOV A, with dry weight as the dependent variable, shell length as a covariate, and site, exposure and month, as independent variables. The second approach used the more reliable and detailed method of assessing the annual reproductive cycle using histological sections of the gonad. Histological sections of gonads from thirty female mussels, sampled monthly from each site, were examined in the laboratory. Each gonad was categorized into one of six arbitrary developmental stages based on ovary morphology. Synchrony in spawning was examined by comparison of gonad developmental stages of individuals within and among populations. The data were analysed by 3-way nested ANOV A with mean gonad index for each population as the dependent variable, month as an independent variable and exposure nested in site. The results obtained from both techniques showed strong synchronisation among different popUlations, regardless of the scales at which they were separated. The data also indicated good synchrony within populations and, again among populations, regardless of the degree of exposure. The results also indicated that the gonad condition varied significantly at each site, exposure level and month. However, there were significant interactions among these three factors. This means that on a broader seasonal scale the six mussel populations were reasonably synchronised, but on finer monthly scales, there were temporal differences in duration of gametogenic events. The implication is that ovary development is cued by environmental factor(s) that operate on scales of at least 7-20 km rather than more localised events that may affect food availablity either through aggregation of food (local hydrography at different localities) or food delivery to the shore (degree of wave action at different sites.) , KMBT_363 , Adobe Acrobat 9.54 Paper Capture Plug-in
- Full Text:
- Authors: Ndzipa, Victoria
- Date: 2013-05-28
- Subjects: Mussels -- South Africa , Perna -- South Africa , Perna -- Breeding
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5830 , http://hdl.handle.net/10962/d1007857 , Mussels -- South Africa , Perna -- South Africa , Perna -- Breeding
- Description: The general biology and seasonality of breeding of intertidal populations of the brown mussel Perna perna in South Africa are reasonably well known, but we have little information on variability either within or among populations. Synchronous spawning offers adaptive advantages to externally breeding animals. Firstly, it enhances fertilization rates and therefore the species' reproductive fitness. Secondly, spawning can also be timed to coincide with environmental conditions conducive to larval settlement and development. In addition, synchronisation of spawning will influence the synchrony of settlement. Synchronisation of larval settlement, in turn, has implications for popUlation biology, as highly pulsed settlement is likely to lead to density-dependant mortality of recruits and uncoupling of adult/recruit densities, while poorly synchronised settlement will not. Generally, sea temperature and food availability are considered the key factors underlying the initiation and the duration of the breeding cycle of mussels. However, there are proximate local cues that trigger the proliferation, maturation and release of gametes. In this study, the hypothesis tested is that factors that control food availability affect gonad development and so influence synchrony among populations. Much of the published work on spawning is based on observations of the presence of larvae in the plankton, or on settlement. A more reliable method correlates the sequence of gonad development throughout the year with changes in length-weight relationships, using histology. This study is also designed to investigate temporal differences in the timing of the breeding cycle between sheltered and exposed sites along the south coast of South Africa by histological analysis of the reproductive tissue (the gonad) and by dry weight/shell length regreSSIOns. To do this, these two techniques were applied to six mussel populations at three III ocalities that were separated on scales of about 10-20km. Within each locality, two study sites were .dentified. One was exposed to strong wave action and one was sheltered. A few hundred meters ;eparated these sites. The first technique used length-weight regressions as an indication of mussel ~ondition. Abrupt decreases in the dry body weight of a hypothetical standard animal were taken to indicate periods of spawning. Regressions were assessed for samples of 40 mussels taken from each site at intervals of 4 weeks over 13 months. The results were analysed using a 3-way ANCOV A, with dry weight as the dependent variable, shell length as a covariate, and site, exposure and month, as independent variables. The second approach used the more reliable and detailed method of assessing the annual reproductive cycle using histological sections of the gonad. Histological sections of gonads from thirty female mussels, sampled monthly from each site, were examined in the laboratory. Each gonad was categorized into one of six arbitrary developmental stages based on ovary morphology. Synchrony in spawning was examined by comparison of gonad developmental stages of individuals within and among populations. The data were analysed by 3-way nested ANOV A with mean gonad index for each population as the dependent variable, month as an independent variable and exposure nested in site. The results obtained from both techniques showed strong synchronisation among different popUlations, regardless of the scales at which they were separated. The data also indicated good synchrony within populations and, again among populations, regardless of the degree of exposure. The results also indicated that the gonad condition varied significantly at each site, exposure level and month. However, there were significant interactions among these three factors. This means that on a broader seasonal scale the six mussel populations were reasonably synchronised, but on finer monthly scales, there were temporal differences in duration of gametogenic events. The implication is that ovary development is cued by environmental factor(s) that operate on scales of at least 7-20 km rather than more localised events that may affect food availablity either through aggregation of food (local hydrography at different localities) or food delivery to the shore (degree of wave action at different sites.) , KMBT_363 , Adobe Acrobat 9.54 Paper Capture Plug-in
- Full Text:
A standardised protocol for roadkill detection and the determinants of roadkill in the greater Mapungubwe Transfrontier Conservation Area, Limpopo Province, South Africa
- Authors: Collinson, Wendy Jane
- Date: 2013
- Subjects: Roadkill -- South Africa -- Mapungubwe Site , Traffic safety and wildlife -- South Africa -- Mapungubwe Site
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5606 , http://hdl.handle.net/10962/d1002056 , Roadkill -- South Africa -- Mapungubwe Site , Traffic safety and wildlife -- South Africa -- Mapungubwe Site
- Description: Despite evidence suggesting that road traffic is a major threat to biodiversity loss, very little is known about its actual impact on wildlife populations in South Africa. Globally, road density and traffic volumes are increasing, and although huge budgets are devoted to the construction and upgrading of roads, there is little or no allocation to mitigation measures for protecting fauna in most countries, particularly Africa. Further, no global standardised protocol exists for the rapid assessment of roadkill or the most economical and efficient approach for assessing roadkill rates. Using vehicle field trials, the reliability of detecting artificially deployed roadkill was assessed. Roadkill detection rates decreased significantly at speeds >50 km/h and were also significantly influenced by light conditions (i.e. detection success was greater when the sun was high) and the position of the roadkill on the road (i.e. smaller roadkill on verges were often missed). These results suggest that roadkill sampling was most effective between 1.5 hours after dawn and 1.5 hours before dusk and that driving at slower speeds (<50 km.h⁻ₑ) was required to detect roadkill. This protocol was implemented across three ecological seasons on a 100 km paved road and a 20 km unpaved road in the Greater Mapungubwe Transfrontier Conservation Area, Limpopo Province, South Africa. Driven daily over a 120-day period (three periods consisting each of 40 days), a total of 1,027 roadkill were recorded. These comprised 162 species from all terrestrial vertebrate groups with birds being the most commonly encountered roadkill (50% of all incidents). The high numbers of vertebrates identified as roadkill suggests that road traffic could have potentially unsustainable impacts on wildlife populations and hence the biodiversity of the area. Seventeen variables were identified as possible determinants of roadkill occurrence with season, rainfall, minimum and maximum temperature, habitat type, grass height, grass density, fence type and vehicle type significantly influencing roadkill numbers. Significantly more roadkill were detected on the paved road (9.91/100km) than on the unpaved road (1.8/100km) probably because of greater traffic volumes and the increased speed that vehicles travelled on the paved road. Warmer temperatures and increased rainfall in the preceding 24 hours also increased road mortality numbers as animals tended to become more active during these times. Interestingly, more roadkill was detected in open roadside habitats compared to dense roadside habitats on both the paved and unpaved roads and when grass on the roadside verge was of intermediate height. Open habitat possibly may provide a natural corridor for wildlife which ultimately end up on the road. Roadkill numbers increased when certain other physical barriers, such as cattle fences, were present, probably because these barriers were more penetrable than electric fencing. A series of mitigation measures are proposed to reduce the impacts of roads on wildlife in South Africa. These mitigation measures highlight the need to address the balance between the development of a country’s transport infrastructure and the conservation of its fauna. It is important that research on the impacts of roads becomes standardised to enable robust statistical comparisons which will provide a greater understanding of the potential threats to vertebrate biodiversity
- Full Text:
- Date Issued: 2013
- Authors: Collinson, Wendy Jane
- Date: 2013
- Subjects: Roadkill -- South Africa -- Mapungubwe Site , Traffic safety and wildlife -- South Africa -- Mapungubwe Site
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5606 , http://hdl.handle.net/10962/d1002056 , Roadkill -- South Africa -- Mapungubwe Site , Traffic safety and wildlife -- South Africa -- Mapungubwe Site
- Description: Despite evidence suggesting that road traffic is a major threat to biodiversity loss, very little is known about its actual impact on wildlife populations in South Africa. Globally, road density and traffic volumes are increasing, and although huge budgets are devoted to the construction and upgrading of roads, there is little or no allocation to mitigation measures for protecting fauna in most countries, particularly Africa. Further, no global standardised protocol exists for the rapid assessment of roadkill or the most economical and efficient approach for assessing roadkill rates. Using vehicle field trials, the reliability of detecting artificially deployed roadkill was assessed. Roadkill detection rates decreased significantly at speeds >50 km/h and were also significantly influenced by light conditions (i.e. detection success was greater when the sun was high) and the position of the roadkill on the road (i.e. smaller roadkill on verges were often missed). These results suggest that roadkill sampling was most effective between 1.5 hours after dawn and 1.5 hours before dusk and that driving at slower speeds (<50 km.h⁻ₑ) was required to detect roadkill. This protocol was implemented across three ecological seasons on a 100 km paved road and a 20 km unpaved road in the Greater Mapungubwe Transfrontier Conservation Area, Limpopo Province, South Africa. Driven daily over a 120-day period (three periods consisting each of 40 days), a total of 1,027 roadkill were recorded. These comprised 162 species from all terrestrial vertebrate groups with birds being the most commonly encountered roadkill (50% of all incidents). The high numbers of vertebrates identified as roadkill suggests that road traffic could have potentially unsustainable impacts on wildlife populations and hence the biodiversity of the area. Seventeen variables were identified as possible determinants of roadkill occurrence with season, rainfall, minimum and maximum temperature, habitat type, grass height, grass density, fence type and vehicle type significantly influencing roadkill numbers. Significantly more roadkill were detected on the paved road (9.91/100km) than on the unpaved road (1.8/100km) probably because of greater traffic volumes and the increased speed that vehicles travelled on the paved road. Warmer temperatures and increased rainfall in the preceding 24 hours also increased road mortality numbers as animals tended to become more active during these times. Interestingly, more roadkill was detected in open roadside habitats compared to dense roadside habitats on both the paved and unpaved roads and when grass on the roadside verge was of intermediate height. Open habitat possibly may provide a natural corridor for wildlife which ultimately end up on the road. Roadkill numbers increased when certain other physical barriers, such as cattle fences, were present, probably because these barriers were more penetrable than electric fencing. A series of mitigation measures are proposed to reduce the impacts of roads on wildlife in South Africa. These mitigation measures highlight the need to address the balance between the development of a country’s transport infrastructure and the conservation of its fauna. It is important that research on the impacts of roads becomes standardised to enable robust statistical comparisons which will provide a greater understanding of the potential threats to vertebrate biodiversity
- Full Text:
- Date Issued: 2013
Drivers of macrophyte assemblages in South African freshwater systems
- Authors: Martin, Grant Douglas
- Date: 2013
- Subjects: Freshwater plants -- South Africa Aquatic weeds -- South Africa Invasive plants -- South Africa Freshwater ecology -- South Africa Biotic communities -- South Africa Maximum entropy method Lagarosiphon major -- South Africa Phytophagous insects -- South Africa Hydrellia -- South Africa Parasitoids -- South Africa
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:5621 , http://hdl.handle.net/10962/d1004127
- Description: Potentially damaging submerged invasive freshwater macrophytes have been identified in South African freshwater systems, but have received less attention than their floating counterparts. To ascertain the changes and effects that these species may have on macrophyte ecology, an understanding of the drivers of macrophyte assemblages is essential. The aims of this thesis were to investigate select abiotic and biotic factors driving introduction, establishment and spread of submerged macrophytes in South Africa. Surveys on the status of submerged plant species in South Africa were conducted to find out the distribution and diversity of the species present, imported to, and traded in South Africa. Numerous submerged indigenous and invasive macrophyte locality records were collected during field surveys, of which many were first time records. Pet stores and aquarist trading activities were identified as potential vectors for the spread of submerged macrophytes through online surveys and personal interviews. These results highlighted the potential these species have for continuing to enter, and spread within South African water bodies. Maximum Entropy (MAXENT) is a general-purpose method used to predict or infer distributions from incomplete information, and was used here to predict areas suitable for the establishment of five of these invasive macrophytes. Many systems throughout South Africa, particularly those in the subtropical coastal regions, were found to be climatically suitable for the establishment of Elodea canadensis Michx., Egeria densa Planch., Hydrilla verticillata (L.f.) Royle (all Hydrocharitaceae), Myriophyllum spicatum L. (Haloragaceae), and Cabomba caroliniana Gray (Cabombaceae). Despite the high probability of invasion, facilitated by vectors and suitable climate, South Africa’s rich indigenous submerged aquatic flora may be preventing the establishment of these submerged invasive species. Studies on the competitive interactions between a common indigenous submerged macrophytes, Lagarosiphon major (Roxb.) (Hydrocharitaceae) and M.spicatum, an invasive native to Eurasia, were conducted to ascertain which conditions influence competitive superiority. High sediment nutrient conditions significantly increased the growth rate and competitive ability of both species, while clay sediments significantly increased the competitive ability of L. major over M. spicatum, but sandy sediments improved the competitive ability of M. spicatum. These results highlighted the dynamic changes in competition between submerged species driven by abiotic factors, but did not take into consideration the effect that herbivory, a biotic factor, could have on competition between the two species. The effect of herbivory by phytophagous insects of submerged plant species has been regarded as negligible. To find out what this effect is, multiple field surveys were undertaken throughout South Africa to find natural enemies of indigenous Lagarosiphon species with the aim of identifying such species, and quantifying their influence on plant growth dynamics. Several new phytophagous species were recorded for the first time. An ephydrid fly, Hydrellia lagarosiphon Deeming (Diptera: Ephydridae) was ascertained to be the most ubiquitous and abundant species associated with L. major in South Africa. The influence of herbivory by this fly on the competitive ability of L. major in the presence of M. spicatum was investigated using an inverse linear model, which showed that herbivory by H. lagarosiphon reduced the competitive ability of L. major by approximately five times in favour of M. spicatum. This study served to highlight the importance of herbivory as a driver of submerged aquatic plant dynamics. Current ecological theory emphasises the importance of investigating beyond plant-herbivore interactions, by including multitrophic interactions in community dynamics. Therefore, the potential of parasitism by a parasitoid wasp, Chaenusa luteostigma sp. n. Achterberg (Hymenoptera: Braconidae: Alysiinae) on H. lagarosiphon to shift the competitive interactions between the two plant species was also examined. The addition of the parasitoid reduced the effect of herbivory by the fly on L. major by half, thereby shifting the competitive balance in favour of L. major over M. spicatum. This study provides valuable insight into a selection of drivers of submerged macrophyte assemblages of South Africa. It highlights the precarious position of South African freshwater systems with regard to the potential invasion by damaging submerged invasive species. It also provides interesting insights into the effect of competition, herbivory and parasitism on the establishment and spread of species within submerged freshwater systems. Understanding the different influences could assist managers and policy makers to make validated decisions ensuring the integrity of South African freshwater systems.
- Full Text:
- Date Issued: 2013
- Authors: Martin, Grant Douglas
- Date: 2013
- Subjects: Freshwater plants -- South Africa Aquatic weeds -- South Africa Invasive plants -- South Africa Freshwater ecology -- South Africa Biotic communities -- South Africa Maximum entropy method Lagarosiphon major -- South Africa Phytophagous insects -- South Africa Hydrellia -- South Africa Parasitoids -- South Africa
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:5621 , http://hdl.handle.net/10962/d1004127
- Description: Potentially damaging submerged invasive freshwater macrophytes have been identified in South African freshwater systems, but have received less attention than their floating counterparts. To ascertain the changes and effects that these species may have on macrophyte ecology, an understanding of the drivers of macrophyte assemblages is essential. The aims of this thesis were to investigate select abiotic and biotic factors driving introduction, establishment and spread of submerged macrophytes in South Africa. Surveys on the status of submerged plant species in South Africa were conducted to find out the distribution and diversity of the species present, imported to, and traded in South Africa. Numerous submerged indigenous and invasive macrophyte locality records were collected during field surveys, of which many were first time records. Pet stores and aquarist trading activities were identified as potential vectors for the spread of submerged macrophytes through online surveys and personal interviews. These results highlighted the potential these species have for continuing to enter, and spread within South African water bodies. Maximum Entropy (MAXENT) is a general-purpose method used to predict or infer distributions from incomplete information, and was used here to predict areas suitable for the establishment of five of these invasive macrophytes. Many systems throughout South Africa, particularly those in the subtropical coastal regions, were found to be climatically suitable for the establishment of Elodea canadensis Michx., Egeria densa Planch., Hydrilla verticillata (L.f.) Royle (all Hydrocharitaceae), Myriophyllum spicatum L. (Haloragaceae), and Cabomba caroliniana Gray (Cabombaceae). Despite the high probability of invasion, facilitated by vectors and suitable climate, South Africa’s rich indigenous submerged aquatic flora may be preventing the establishment of these submerged invasive species. Studies on the competitive interactions between a common indigenous submerged macrophytes, Lagarosiphon major (Roxb.) (Hydrocharitaceae) and M.spicatum, an invasive native to Eurasia, were conducted to ascertain which conditions influence competitive superiority. High sediment nutrient conditions significantly increased the growth rate and competitive ability of both species, while clay sediments significantly increased the competitive ability of L. major over M. spicatum, but sandy sediments improved the competitive ability of M. spicatum. These results highlighted the dynamic changes in competition between submerged species driven by abiotic factors, but did not take into consideration the effect that herbivory, a biotic factor, could have on competition between the two species. The effect of herbivory by phytophagous insects of submerged plant species has been regarded as negligible. To find out what this effect is, multiple field surveys were undertaken throughout South Africa to find natural enemies of indigenous Lagarosiphon species with the aim of identifying such species, and quantifying their influence on plant growth dynamics. Several new phytophagous species were recorded for the first time. An ephydrid fly, Hydrellia lagarosiphon Deeming (Diptera: Ephydridae) was ascertained to be the most ubiquitous and abundant species associated with L. major in South Africa. The influence of herbivory by this fly on the competitive ability of L. major in the presence of M. spicatum was investigated using an inverse linear model, which showed that herbivory by H. lagarosiphon reduced the competitive ability of L. major by approximately five times in favour of M. spicatum. This study served to highlight the importance of herbivory as a driver of submerged aquatic plant dynamics. Current ecological theory emphasises the importance of investigating beyond plant-herbivore interactions, by including multitrophic interactions in community dynamics. Therefore, the potential of parasitism by a parasitoid wasp, Chaenusa luteostigma sp. n. Achterberg (Hymenoptera: Braconidae: Alysiinae) on H. lagarosiphon to shift the competitive interactions between the two plant species was also examined. The addition of the parasitoid reduced the effect of herbivory by the fly on L. major by half, thereby shifting the competitive balance in favour of L. major over M. spicatum. This study provides valuable insight into a selection of drivers of submerged macrophyte assemblages of South Africa. It highlights the precarious position of South African freshwater systems with regard to the potential invasion by damaging submerged invasive species. It also provides interesting insights into the effect of competition, herbivory and parasitism on the establishment and spread of species within submerged freshwater systems. Understanding the different influences could assist managers and policy makers to make validated decisions ensuring the integrity of South African freshwater systems.
- Full Text:
- Date Issued: 2013
Entomopathogenic fungi for control of soil-borne life stages of false codling moth, Thaumatotibia leucotreta (Meyrick) (1912) (Lepidoptera: Tortricidae)
- Authors: Coombes, Candice Anne
- Date: 2013
- Subjects: Tortricidae , Lepidoptera , Cryptophlebia leucotreta , Insect pests -- Biological control -- South Africa -- Eastern Cape , Tortricidae -- Biological control -- South Africa -- Eastern Cape , Citrus -- Diseases and pests -- Biological control -- South Africa -- Eastern Cape , Entomopathogenic fungi , Fungi as biological pest control agents , Biological pest control agents
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5607 , http://hdl.handle.net/10962/d1002057 , Tortricidae , Lepidoptera , Cryptophlebia leucotreta , Insect pests -- Biological control -- South Africa -- Eastern Cape , Tortricidae -- Biological control -- South Africa -- Eastern Cape , Citrus -- Diseases and pests -- Biological control -- South Africa -- Eastern Cape , Entomopathogenic fungi , Fungi as biological pest control agents , Biological pest control agents
- Description: False codling moth (FCM), Thaumatotibia leucotreta is an extremely important pest of citrus in South Africa and with the shift away from the use of chemicals, alternate control options are needed. One avenue of control which has only recently been investigated against the soil-borne life stages of FCM is the use of entomopathogenic fungi (EPF). In 2009, 12 entomopathogenic fungal isolates collected from South African citrus orchards showed good control potential during laboratory conducted bioassays. The aim of this study was to further analyse the potential of these isolates through concentration-dose and exposure-time response bioassays. After initial re-screening, concentration-dose response and exposure-time response sandconidial bioassays, three isolates were identified as exhibiting the greatest control potential against FCM in soil, Metarhizium anisopliae var. anisopliae (G 11 3 L6 and FCM Ar 23 B3) and Beauveria bassiana (G Ar 17 B3). Percentage mycosis was found to be directly related to fungal concentration as well as the amount of time FCM 5th instar larvae were exposed to the fungal conidia. LC50 values for the three isolates were not greater than 1.92 x 10⁶ conidia.ml⁻ₑ and at the LC₅₀, FCM 5th instar larvae would need to be exposed to the fungus for a maximum of 13 days to ensure a high mortality level. These isolates along with two commercially available EPF products were subjected to field persistence trials whereby net bags filled with a mixture of autoclaved sand and formulated fungal product were buried in an Eastern Cape citrus orchard. The viability of each isolate was measured on a monthly basis for a period of six months. All isolates were capable of persisting in the soil for six months with the collected isolates persisting far better than the commercially used isolates. Two of the isolates, G 11 3 L6 and G Ar 17 B3, were subjected to small scale laboratory application trials. Two formulations were investigated at two concentrations. For each isolate, each formulation and each concentration, FCM 5th instar larvae were applied and allowed to burrow into the soil to pupate before fungal application or after fungal application. Contact between fungi and FCM host is essential as, in contrast to pre-larval treatments, percentage mortality in post-larval treatments was low for both formulations and both isolates. For isolate G Ar 17 B3, a conidial suspension applied as a spray at a concentration of 1 x 10⁷ conidia.ml⁻ₑ obtained the highest percentage mortality (80 %). For isolate G 11 3 L6 however, both formulations performed equally well at a high, 1 x10⁷ conidia.ml⁻ₑ concentration (conidial suspension: 60 %; granular: 65 %) The results obtained thus far are promising for the control of FCM in citrus, but if these EPFs are to successfully integrate into current FCM control practices more research, some of which is discussed, is essential
- Full Text:
- Date Issued: 2013
- Authors: Coombes, Candice Anne
- Date: 2013
- Subjects: Tortricidae , Lepidoptera , Cryptophlebia leucotreta , Insect pests -- Biological control -- South Africa -- Eastern Cape , Tortricidae -- Biological control -- South Africa -- Eastern Cape , Citrus -- Diseases and pests -- Biological control -- South Africa -- Eastern Cape , Entomopathogenic fungi , Fungi as biological pest control agents , Biological pest control agents
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5607 , http://hdl.handle.net/10962/d1002057 , Tortricidae , Lepidoptera , Cryptophlebia leucotreta , Insect pests -- Biological control -- South Africa -- Eastern Cape , Tortricidae -- Biological control -- South Africa -- Eastern Cape , Citrus -- Diseases and pests -- Biological control -- South Africa -- Eastern Cape , Entomopathogenic fungi , Fungi as biological pest control agents , Biological pest control agents
- Description: False codling moth (FCM), Thaumatotibia leucotreta is an extremely important pest of citrus in South Africa and with the shift away from the use of chemicals, alternate control options are needed. One avenue of control which has only recently been investigated against the soil-borne life stages of FCM is the use of entomopathogenic fungi (EPF). In 2009, 12 entomopathogenic fungal isolates collected from South African citrus orchards showed good control potential during laboratory conducted bioassays. The aim of this study was to further analyse the potential of these isolates through concentration-dose and exposure-time response bioassays. After initial re-screening, concentration-dose response and exposure-time response sandconidial bioassays, three isolates were identified as exhibiting the greatest control potential against FCM in soil, Metarhizium anisopliae var. anisopliae (G 11 3 L6 and FCM Ar 23 B3) and Beauveria bassiana (G Ar 17 B3). Percentage mycosis was found to be directly related to fungal concentration as well as the amount of time FCM 5th instar larvae were exposed to the fungal conidia. LC50 values for the three isolates were not greater than 1.92 x 10⁶ conidia.ml⁻ₑ and at the LC₅₀, FCM 5th instar larvae would need to be exposed to the fungus for a maximum of 13 days to ensure a high mortality level. These isolates along with two commercially available EPF products were subjected to field persistence trials whereby net bags filled with a mixture of autoclaved sand and formulated fungal product were buried in an Eastern Cape citrus orchard. The viability of each isolate was measured on a monthly basis for a period of six months. All isolates were capable of persisting in the soil for six months with the collected isolates persisting far better than the commercially used isolates. Two of the isolates, G 11 3 L6 and G Ar 17 B3, were subjected to small scale laboratory application trials. Two formulations were investigated at two concentrations. For each isolate, each formulation and each concentration, FCM 5th instar larvae were applied and allowed to burrow into the soil to pupate before fungal application or after fungal application. Contact between fungi and FCM host is essential as, in contrast to pre-larval treatments, percentage mortality in post-larval treatments was low for both formulations and both isolates. For isolate G Ar 17 B3, a conidial suspension applied as a spray at a concentration of 1 x 10⁷ conidia.ml⁻ₑ obtained the highest percentage mortality (80 %). For isolate G 11 3 L6 however, both formulations performed equally well at a high, 1 x10⁷ conidia.ml⁻ₑ concentration (conidial suspension: 60 %; granular: 65 %) The results obtained thus far are promising for the control of FCM in citrus, but if these EPFs are to successfully integrate into current FCM control practices more research, some of which is discussed, is essential
- Full Text:
- Date Issued: 2013
Genetics and thermal biology of littorinid snails of the genera Afrolittorina, Echinolittorina and Littoraria (Gastropoda: Littorinidae) from temperate, subtropical and tropical regions
- Authors: Matumba, Tshifhiwa Given
- Date: 2013
- Subjects: Littorinidae -- South Africa Littorinidae -- Brunei Littorinidae -- Adaptation -- South Africa Littorinidae -- Adaptation -- Brunei Littorinidae -- Effect of temperature on -- South Africa Littorinidae -- Effect of temperature on -- Brunei Littorinidae -- Physiology Snails -- South Africa Snails -- Brunei Gastropoda -- South Africa Gastropoda -- Brunei Intertidal animals -- South Africa Intertidal animals -- Brunei
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:5588 , http://hdl.handle.net/10962/d1001953
- Description: With the anticipated effects of climate change due to global warming, there is concern over how animals, especially ectotherms, will respond to or tolerate extreme and fluctuating environmental temperature stress. Littorinid snails are intertidal ectotherms that live high on the shore where they experience both extreme and variable conditions of temperature and desiccation stress, and are believed to live close to their tolerance limits. This study investigated the thermal biology of littorinid snails of the genera Afrolittorina, Echinolittorina and Littoraria from temperate, subtropical and tropical regions in South Africa and Brunei Darussalam using thermal tolerance, heart function, and proteome approaches. The effects of conditions, such as rate of change in temperature, acclimation, heat shock, season and starvation were also tested. In addition, the evolutionary relationships and genetic diversity between and within the South African Afrolittorina spp. were investigated using mitochondrial and nuclear markers. Genetic results confirmed that these are two distinct species, with the brown to black A. knysnaensis predominant in the cool-temperate region of South Africa and the pale blue-grey A. africana in the subtropical region. There was low genetic variation and differentiation within each species, suggesting high gene flow among populations as a result of the effects of ocean currents on the dispersal of their planktotrophic larvae. Tests using exposure to high temperatures revealed differences in the thermal tolerances, heart performance and protein profiles of species from different latitudes, regions and zones on the shore. Thermal tolerance conformed to expectations, with clear, statistically significant trends from high tolerance in subtropical species to lower tolerance in temperate species. However, for Afrolittorina spp., there were no significant differences in the thermal tolerances of conspecifics from different regions, though there was a significant difference in thermal tolerance between juveniles and adults. Overall, adults of all species showed higher thermal tolerances than juveniles. Although lethal temperatures for these species were higher in summer than winter, laboratory acclimation had no effect on heat coma temperatures. All species showed some regulation of heart rate, with a degree of independence of heart rate from temperature across mid-range temperatures. The tropical species showed quick induction and good regulation of heart rate followed by the subtropical and temperate species, which displayed mixed responses including regulation, partial regulation and lack of regulation. Overall, tropical Echinolittorina spp. showed good regulation, while the subtropical E. natalensis and Littoraria glabrata exhibited a mixture of partial regulation and regulation. The subtropical/temperate Afrolittorina spp. showed high individual variability, some animals exhibiting regulation, while others did not. These effects seem to be largely phylogenetically determined as there were no differences in the heart rate responses of Afrolittorina spp. from different regions. The temperatures at which heart rate became independent of temperature (thermoneutral zone) were within the range experienced under natural conditions. In addition, there were differences in Arrhenius breakpoint and endpoint temperatures, showing a trend from higher in tropical animals to lower for temperate animals. Conditions such as acclimation, heat shock and starvation had little or no effect on heart performance. However, a slow increase in temperature induced good regulation of heart rate with noticeable shifts of breakpoints and endpoints for Afrolittorina spp. Lastly, there were differences in the proteome responses between and within Afrolittorina spp. as a function of species, size and treatment. Although both large and small A. knysnaensis had a greater number of protein spots in their proteome than A. africana (though the difference was not significant), the later showed significantly higher differential expression of certain proteins following heat stress. In addition, juveniles of both species displayed greater numbers of protein spots in their proteome than adults. The results indicate a difference in the physiological and biochemical responses (i.e. adaptations) of these snails to temperature, and this seems to relate to differences in biogeography, phylogeny, species identity and ecology. The ability to regulate heart rate is phylogenetically determined, while thresholds and lethal limits correspond to biogeography and species ecology. The proteome seems to correspond to species ecology. The results also indicate that these littorinids can tolerate high temperature stress and in this respect they are well suited to life in the intertidal zones or habitats where temperature and other stresses or conditions are extreme and can change abruptly. However, the limited ability of these snails to acclimate to different temperatures suggests that they are already living close to their tolerance limits with small safety margins or narrow thermal windows and so may be vulnerable to small rises in substratum temperature and/or solar radiation.
- Full Text:
- Date Issued: 2013
- Authors: Matumba, Tshifhiwa Given
- Date: 2013
- Subjects: Littorinidae -- South Africa Littorinidae -- Brunei Littorinidae -- Adaptation -- South Africa Littorinidae -- Adaptation -- Brunei Littorinidae -- Effect of temperature on -- South Africa Littorinidae -- Effect of temperature on -- Brunei Littorinidae -- Physiology Snails -- South Africa Snails -- Brunei Gastropoda -- South Africa Gastropoda -- Brunei Intertidal animals -- South Africa Intertidal animals -- Brunei
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:5588 , http://hdl.handle.net/10962/d1001953
- Description: With the anticipated effects of climate change due to global warming, there is concern over how animals, especially ectotherms, will respond to or tolerate extreme and fluctuating environmental temperature stress. Littorinid snails are intertidal ectotherms that live high on the shore where they experience both extreme and variable conditions of temperature and desiccation stress, and are believed to live close to their tolerance limits. This study investigated the thermal biology of littorinid snails of the genera Afrolittorina, Echinolittorina and Littoraria from temperate, subtropical and tropical regions in South Africa and Brunei Darussalam using thermal tolerance, heart function, and proteome approaches. The effects of conditions, such as rate of change in temperature, acclimation, heat shock, season and starvation were also tested. In addition, the evolutionary relationships and genetic diversity between and within the South African Afrolittorina spp. were investigated using mitochondrial and nuclear markers. Genetic results confirmed that these are two distinct species, with the brown to black A. knysnaensis predominant in the cool-temperate region of South Africa and the pale blue-grey A. africana in the subtropical region. There was low genetic variation and differentiation within each species, suggesting high gene flow among populations as a result of the effects of ocean currents on the dispersal of their planktotrophic larvae. Tests using exposure to high temperatures revealed differences in the thermal tolerances, heart performance and protein profiles of species from different latitudes, regions and zones on the shore. Thermal tolerance conformed to expectations, with clear, statistically significant trends from high tolerance in subtropical species to lower tolerance in temperate species. However, for Afrolittorina spp., there were no significant differences in the thermal tolerances of conspecifics from different regions, though there was a significant difference in thermal tolerance between juveniles and adults. Overall, adults of all species showed higher thermal tolerances than juveniles. Although lethal temperatures for these species were higher in summer than winter, laboratory acclimation had no effect on heat coma temperatures. All species showed some regulation of heart rate, with a degree of independence of heart rate from temperature across mid-range temperatures. The tropical species showed quick induction and good regulation of heart rate followed by the subtropical and temperate species, which displayed mixed responses including regulation, partial regulation and lack of regulation. Overall, tropical Echinolittorina spp. showed good regulation, while the subtropical E. natalensis and Littoraria glabrata exhibited a mixture of partial regulation and regulation. The subtropical/temperate Afrolittorina spp. showed high individual variability, some animals exhibiting regulation, while others did not. These effects seem to be largely phylogenetically determined as there were no differences in the heart rate responses of Afrolittorina spp. from different regions. The temperatures at which heart rate became independent of temperature (thermoneutral zone) were within the range experienced under natural conditions. In addition, there were differences in Arrhenius breakpoint and endpoint temperatures, showing a trend from higher in tropical animals to lower for temperate animals. Conditions such as acclimation, heat shock and starvation had little or no effect on heart performance. However, a slow increase in temperature induced good regulation of heart rate with noticeable shifts of breakpoints and endpoints for Afrolittorina spp. Lastly, there were differences in the proteome responses between and within Afrolittorina spp. as a function of species, size and treatment. Although both large and small A. knysnaensis had a greater number of protein spots in their proteome than A. africana (though the difference was not significant), the later showed significantly higher differential expression of certain proteins following heat stress. In addition, juveniles of both species displayed greater numbers of protein spots in their proteome than adults. The results indicate a difference in the physiological and biochemical responses (i.e. adaptations) of these snails to temperature, and this seems to relate to differences in biogeography, phylogeny, species identity and ecology. The ability to regulate heart rate is phylogenetically determined, while thresholds and lethal limits correspond to biogeography and species ecology. The proteome seems to correspond to species ecology. The results also indicate that these littorinids can tolerate high temperature stress and in this respect they are well suited to life in the intertidal zones or habitats where temperature and other stresses or conditions are extreme and can change abruptly. However, the limited ability of these snails to acclimate to different temperatures suggests that they are already living close to their tolerance limits with small safety margins or narrow thermal windows and so may be vulnerable to small rises in substratum temperature and/or solar radiation.
- Full Text:
- Date Issued: 2013
Identification and evaluation of key factors for rehabilitation of shores denuded of mussels (Perna perna) along the Transkei Coast, South Africa
- Authors: Macala, Lukholo
- Date: 2013
- Subjects: Mussels -- Ecology -- South Africa -- Transkei , Mussels -- Conservation -- South Africa -- Transkei , Mussels -- Growth -- South Africa -- Transkei , Mussels -- Effect of human beings on -- South Africa -- Transkei , Mussels -- Reproduction -- South Africa -- Transkei , Perna -- South Africa -- Transkei
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5611 , http://hdl.handle.net/10962/d1002966 , Mussels -- Ecology -- South Africa -- Transkei , Mussels -- Conservation -- South Africa -- Transkei , Mussels -- Growth -- South Africa -- Transkei , Mussels -- Effect of human beings on -- South Africa -- Transkei , Mussels -- Reproduction -- South Africa -- Transkei , Perna -- South Africa -- Transkei
- Description: Mussels play an important supplementary role in the diet of local communities on the Transkei coast in the Eastern Cape province of South Africa. The exploitation of mussels date back to about 1350 years ago, but in the last 3 decades, exploitation of the brown mussel Perna perna has become unsustainable with mussels collected as small as 30-40mm when they are only just sexually mature. Dye and Dyantyi (2002) developed a technique to rehabilitate areas denuded of adult mussels. The government sponsored Mussel Rehabilitation Project (MRP) to use this technique but only some sites have been successfully rehabilitated, reaching c. 80 % cover within a year whilst others only reach about 5%. At an unexploited site (Riet River), I tested the effects of mussel size and wave strength on the effectiveness of the rehabilitation technique, hypothesizing that different size classes may respond differently due to differences in their energy allocation (growth vs reproduction), while wave action determines food supply. Small (1-2cm) and large mussels (3-4cm) were deployed for rehabilitation at 2 exposed and 2 sheltered sites, separated by 100s m. A similar study was repeated in Coffee Bay where shores are exploited. Six sites were selected, 3 sites that had been successfully rehabilitated and 3 that were unsuccessful according to the MRP. Again, two size classes were used but these differed from the first experiment. Mussels of 3-4cm size were now rated as small and 5-6cm as large. Two methods were used to re-attach mussels, the original and the same method with the addition of mesh bags during mussel deployment. Treatments were examined on three occasions at approximately one month intervals. At Riet River, the sites chosen did not show differences in wave strength (measured using dynamometers) or water flux (measured using erosion of cement balls) so that water motion was excluded from the analyses. Small mussels grew faster and had weaker attachment than large mussels. There was no difference in condition index between small and large mussels, or in the numbers of recruits settling among the byssus threads of deployed mussels of the two size classes. In Coffee Bay, there was no relationship between rehabilitation success and maximum wave force, and no difference in bulk water flux among sites. Small mussels deployed using mesh bags survived better than non-meshed or large mussels of either treatment. There was no difference in condition index (CI) between mesh and no-mesh, or between small and large mussels. As in the case of Riet River, small mussels grew faster than large mussels, but large mussels attached stronger than small mussels, with no effect of mesh. Although the factors that improve reseeding of mussels can be identified (use of mesh, use of small mussels, choice of sites with high recruitment rates), successful long-term rehabilitation requires appropriate subsequent management of re-seeded sites.
- Full Text:
- Date Issued: 2013
- Authors: Macala, Lukholo
- Date: 2013
- Subjects: Mussels -- Ecology -- South Africa -- Transkei , Mussels -- Conservation -- South Africa -- Transkei , Mussels -- Growth -- South Africa -- Transkei , Mussels -- Effect of human beings on -- South Africa -- Transkei , Mussels -- Reproduction -- South Africa -- Transkei , Perna -- South Africa -- Transkei
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5611 , http://hdl.handle.net/10962/d1002966 , Mussels -- Ecology -- South Africa -- Transkei , Mussels -- Conservation -- South Africa -- Transkei , Mussels -- Growth -- South Africa -- Transkei , Mussels -- Effect of human beings on -- South Africa -- Transkei , Mussels -- Reproduction -- South Africa -- Transkei , Perna -- South Africa -- Transkei
- Description: Mussels play an important supplementary role in the diet of local communities on the Transkei coast in the Eastern Cape province of South Africa. The exploitation of mussels date back to about 1350 years ago, but in the last 3 decades, exploitation of the brown mussel Perna perna has become unsustainable with mussels collected as small as 30-40mm when they are only just sexually mature. Dye and Dyantyi (2002) developed a technique to rehabilitate areas denuded of adult mussels. The government sponsored Mussel Rehabilitation Project (MRP) to use this technique but only some sites have been successfully rehabilitated, reaching c. 80 % cover within a year whilst others only reach about 5%. At an unexploited site (Riet River), I tested the effects of mussel size and wave strength on the effectiveness of the rehabilitation technique, hypothesizing that different size classes may respond differently due to differences in their energy allocation (growth vs reproduction), while wave action determines food supply. Small (1-2cm) and large mussels (3-4cm) were deployed for rehabilitation at 2 exposed and 2 sheltered sites, separated by 100s m. A similar study was repeated in Coffee Bay where shores are exploited. Six sites were selected, 3 sites that had been successfully rehabilitated and 3 that were unsuccessful according to the MRP. Again, two size classes were used but these differed from the first experiment. Mussels of 3-4cm size were now rated as small and 5-6cm as large. Two methods were used to re-attach mussels, the original and the same method with the addition of mesh bags during mussel deployment. Treatments were examined on three occasions at approximately one month intervals. At Riet River, the sites chosen did not show differences in wave strength (measured using dynamometers) or water flux (measured using erosion of cement balls) so that water motion was excluded from the analyses. Small mussels grew faster and had weaker attachment than large mussels. There was no difference in condition index between small and large mussels, or in the numbers of recruits settling among the byssus threads of deployed mussels of the two size classes. In Coffee Bay, there was no relationship between rehabilitation success and maximum wave force, and no difference in bulk water flux among sites. Small mussels deployed using mesh bags survived better than non-meshed or large mussels of either treatment. There was no difference in condition index (CI) between mesh and no-mesh, or between small and large mussels. As in the case of Riet River, small mussels grew faster than large mussels, but large mussels attached stronger than small mussels, with no effect of mesh. Although the factors that improve reseeding of mussels can be identified (use of mesh, use of small mussels, choice of sites with high recruitment rates), successful long-term rehabilitation requires appropriate subsequent management of re-seeded sites.
- Full Text:
- Date Issued: 2013
Population size, demography and spatial ecology of cheetahs in the Timbavati Private Nature Reserve, South Africa
- Authors: Dyer, Siobhan Margaret
- Date: 2013
- Subjects: Timbavati Game Reserve (South Africa) Cheetah -- South Africa -- Timbavati Game Reserve Spatial behavior in animals Cheetah -- Behavior -- South Africa -- Timbavati Game Reserve Animal populations Population biology Rare mammals -- South Africa -- Timbavati Game Reserve Cheetah -- Effect of human beings on -- South Africa -- Timbavati Game Reserve
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5608 , http://hdl.handle.net/10962/d1002058
- Description: The cheetah (Acinonyx jubatus) has experienced a drastic decline in numbers over the last 20 years globally and is currently listed as vulnerable by the International Union for the Conservation of Nature (IUCN). In South Africa, there are only an estimated 763 free-ranging cheetahs and conflict with humans is arguably the most significant reason for this low number. The aim of my study was to determine the population size and demographic characteristics of the cheetah population within the Timbavati Private Nature Reserve (TPNR), South Africa, and to contribute to a better understanding of cheetah space use and habitat selection. The research was conducted on TPNR between November 2009 and June 2011 and I used a photographic survey to assess cheetah population size and demographic characteristics. Location data was obtained by collaring two adult male cheetahs with GPS/GSM collars and ad hoc sightings data from across the reserve for an adult female with cubs and three adolescent females. A relatively high minimum population density of 4.46 cheetahs/100km² was estimated, signifying a relatively healthy cheetah population. The sex ratio data indicated a higher male to female ratio and an average litter size of three cubs. The relatively high cub survival rate and density is promising in terms of the status of species within the area, as the data denote the success and potential persistence of the species. Cheetah home ranges varied between 20.97km² for the female with cubs and 659.65km² for the younger collared male. Season did not appear to be a determining factor in terms of home range sizes for the three social groups within the TPNR. However, the males did show a slight increase in their home range sizes during the dry season when resources where presumably more widespread. My results indicate that the cheetah is an adaptable species, flexible in behaviour and able to tolerate a variety of habitat types. Such knowledge is fundamental for planning and implementing the effective management and conservation of cheetahs in South Africa.
- Full Text:
- Date Issued: 2013
- Authors: Dyer, Siobhan Margaret
- Date: 2013
- Subjects: Timbavati Game Reserve (South Africa) Cheetah -- South Africa -- Timbavati Game Reserve Spatial behavior in animals Cheetah -- Behavior -- South Africa -- Timbavati Game Reserve Animal populations Population biology Rare mammals -- South Africa -- Timbavati Game Reserve Cheetah -- Effect of human beings on -- South Africa -- Timbavati Game Reserve
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5608 , http://hdl.handle.net/10962/d1002058
- Description: The cheetah (Acinonyx jubatus) has experienced a drastic decline in numbers over the last 20 years globally and is currently listed as vulnerable by the International Union for the Conservation of Nature (IUCN). In South Africa, there are only an estimated 763 free-ranging cheetahs and conflict with humans is arguably the most significant reason for this low number. The aim of my study was to determine the population size and demographic characteristics of the cheetah population within the Timbavati Private Nature Reserve (TPNR), South Africa, and to contribute to a better understanding of cheetah space use and habitat selection. The research was conducted on TPNR between November 2009 and June 2011 and I used a photographic survey to assess cheetah population size and demographic characteristics. Location data was obtained by collaring two adult male cheetahs with GPS/GSM collars and ad hoc sightings data from across the reserve for an adult female with cubs and three adolescent females. A relatively high minimum population density of 4.46 cheetahs/100km² was estimated, signifying a relatively healthy cheetah population. The sex ratio data indicated a higher male to female ratio and an average litter size of three cubs. The relatively high cub survival rate and density is promising in terms of the status of species within the area, as the data denote the success and potential persistence of the species. Cheetah home ranges varied between 20.97km² for the female with cubs and 659.65km² for the younger collared male. Season did not appear to be a determining factor in terms of home range sizes for the three social groups within the TPNR. However, the males did show a slight increase in their home range sizes during the dry season when resources where presumably more widespread. My results indicate that the cheetah is an adaptable species, flexible in behaviour and able to tolerate a variety of habitat types. Such knowledge is fundamental for planning and implementing the effective management and conservation of cheetahs in South Africa.
- Full Text:
- Date Issued: 2013
Spatial and temporal patterns in the population and the feeding of Palaemon peringueyi (MacPherson 1990) (Decapoda, Palaemonidae) in the Kariega estuary, South Africa
- Nyalungu, Nonhlanhla Precotia Dudu
- Authors: Nyalungu, Nonhlanhla Precotia Dudu
- Date: 2013
- Subjects: Palaemonidae -- Food -- South Africa , Palaemonidae -- Behavior -- South Africa , Palaemonidae -- Habitat -- South Africa , Estuarine biology -- South Africa , Shrimp populations -- South Africa , Shrimps -- South Africa , Decapoda (Crustacea) -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5584 , http://hdl.handle.net/10962/d1001576 , Palaemonidae -- Food -- South Africa , Palaemonidae -- Behavior -- South Africa , Palaemonidae -- Habitat -- South Africa , Estuarine biology -- South Africa , Shrimp populations -- South Africa , Shrimps -- South Africa , Decapoda (Crustacea) -- South Africa
- Description: The spatial and temporal patterns in the population demographs and feeding ecology of the caridean shrimp, Palaemon peringueyi, was investigated over a 12 month period in the permanently open Kariega Estuary situated on the south-east coastline of South Africa. Shrimps were sampled monthly from three stations corresponding to the lower, middle and upper reaches of the Kariega Estuary. The shrimps were collected at the different stations using a pull net. Temperature, salinity, dissolved oxygen and % cover of submerged vegetation were measured at each sampling station. Finally, the feeding ecology of the shrimp was investigated employing stable carbon (δ¹³C) and nitrogen (δ¹⁵N) isotopes analysis. Temperature, salinity, dissolved oxygen and vegetation cover showed distinct seasonal patterns. The shrimps attained total abundances and biomass of between 0 and 245.6 individuals per m² (ind.m⁻²) and between 0 and 13.6 grams wet weight per m² (g wwt.m⁻²), respectively. Mean abundance ranged between 2.3 (± 3.0) and 88 (± 27.3) ind.m⁻² in the lower reach, between 0.9 (± 0.4) to 21.5 (± 4.5) ind.m⁻² in the middle reach and 0 to 1.6 (± 0.5) ind.m⁻² in the upper reach. Mean biomass ranged between 0.4 (± 0.5) and 4.4 (± 1.4) g wwt.m⁻² in the lower reach, between 0.1 (± 0) to 4.3 (± 0.9) g wwt.m⁻² in the middle reach and between 0 to 1.6 (± 0.5) g wwt.m⁻² in the upper reach. Greatest abundances and biomasses were recorded in winter following heavy rainfall within the catchment area. Freshwater inflow which is due to rainfall is thought to provide a cue for the recruitment of marine breeding organisms. The spatial patterns in the distribution of the shrimps showed that juveniles occupied the lower and middle reaches and adults the entire length of the estuary. There were no significant relationships between the abundance and biomass of the shrimps and the selected physico-chemical variables (p > 0.05 in all cases). Results of the stable isotope study indicated that the mean δ¹³C of the shrimps in the lower, middle and upper reaches were -12.4 (± 1.3) ‰, -15.6 (± 0.5) ‰ and -17.5 (± 0.5) ‰, respectively. The δ¹⁵N isotopes of the shrimps in the lower reach was 11.6 (± 0.5) ‰ with middle and upper reaches having similar δ¹⁵N values, 13.5 (± 0.4) ‰ and 13.4 (± 0.4) ‰, respectively. There was no significant difference in the δ¹³C and δ¹⁵N isotope (p > 0.05) between the sexes of the shrimps. Two-way ANOVA indicated a significant difference in the δ¹³C isotope of the shrimps between the sites (p < 0.05). The difference in the δ¹³C and δ¹⁵N ratios of the shrimps suggests spatial variability in the diet of P. peringueyi within the Kariega Estuary. The diet of the shrimps in the lower reach is primarily composed of Nanozostera capensis epibionts. In the middle reach the diet of the shrimps is likely comprised of the detritus of benthic algae. In the upper reach of the estuary, P. peringueyi likely derives its carbon from a combination of epibionts, benthic algae and detritus derived from Codium.
- Full Text:
- Date Issued: 2013
- Authors: Nyalungu, Nonhlanhla Precotia Dudu
- Date: 2013
- Subjects: Palaemonidae -- Food -- South Africa , Palaemonidae -- Behavior -- South Africa , Palaemonidae -- Habitat -- South Africa , Estuarine biology -- South Africa , Shrimp populations -- South Africa , Shrimps -- South Africa , Decapoda (Crustacea) -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5584 , http://hdl.handle.net/10962/d1001576 , Palaemonidae -- Food -- South Africa , Palaemonidae -- Behavior -- South Africa , Palaemonidae -- Habitat -- South Africa , Estuarine biology -- South Africa , Shrimp populations -- South Africa , Shrimps -- South Africa , Decapoda (Crustacea) -- South Africa
- Description: The spatial and temporal patterns in the population demographs and feeding ecology of the caridean shrimp, Palaemon peringueyi, was investigated over a 12 month period in the permanently open Kariega Estuary situated on the south-east coastline of South Africa. Shrimps were sampled monthly from three stations corresponding to the lower, middle and upper reaches of the Kariega Estuary. The shrimps were collected at the different stations using a pull net. Temperature, salinity, dissolved oxygen and % cover of submerged vegetation were measured at each sampling station. Finally, the feeding ecology of the shrimp was investigated employing stable carbon (δ¹³C) and nitrogen (δ¹⁵N) isotopes analysis. Temperature, salinity, dissolved oxygen and vegetation cover showed distinct seasonal patterns. The shrimps attained total abundances and biomass of between 0 and 245.6 individuals per m² (ind.m⁻²) and between 0 and 13.6 grams wet weight per m² (g wwt.m⁻²), respectively. Mean abundance ranged between 2.3 (± 3.0) and 88 (± 27.3) ind.m⁻² in the lower reach, between 0.9 (± 0.4) to 21.5 (± 4.5) ind.m⁻² in the middle reach and 0 to 1.6 (± 0.5) ind.m⁻² in the upper reach. Mean biomass ranged between 0.4 (± 0.5) and 4.4 (± 1.4) g wwt.m⁻² in the lower reach, between 0.1 (± 0) to 4.3 (± 0.9) g wwt.m⁻² in the middle reach and between 0 to 1.6 (± 0.5) g wwt.m⁻² in the upper reach. Greatest abundances and biomasses were recorded in winter following heavy rainfall within the catchment area. Freshwater inflow which is due to rainfall is thought to provide a cue for the recruitment of marine breeding organisms. The spatial patterns in the distribution of the shrimps showed that juveniles occupied the lower and middle reaches and adults the entire length of the estuary. There were no significant relationships between the abundance and biomass of the shrimps and the selected physico-chemical variables (p > 0.05 in all cases). Results of the stable isotope study indicated that the mean δ¹³C of the shrimps in the lower, middle and upper reaches were -12.4 (± 1.3) ‰, -15.6 (± 0.5) ‰ and -17.5 (± 0.5) ‰, respectively. The δ¹⁵N isotopes of the shrimps in the lower reach was 11.6 (± 0.5) ‰ with middle and upper reaches having similar δ¹⁵N values, 13.5 (± 0.4) ‰ and 13.4 (± 0.4) ‰, respectively. There was no significant difference in the δ¹³C and δ¹⁵N isotope (p > 0.05) between the sexes of the shrimps. Two-way ANOVA indicated a significant difference in the δ¹³C isotope of the shrimps between the sites (p < 0.05). The difference in the δ¹³C and δ¹⁵N ratios of the shrimps suggests spatial variability in the diet of P. peringueyi within the Kariega Estuary. The diet of the shrimps in the lower reach is primarily composed of Nanozostera capensis epibionts. In the middle reach the diet of the shrimps is likely comprised of the detritus of benthic algae. In the upper reach of the estuary, P. peringueyi likely derives its carbon from a combination of epibionts, benthic algae and detritus derived from Codium.
- Full Text:
- Date Issued: 2013
The Drakensberg rock-jumper: ecology and genetic status of isolated montane populations
- Authors: Morris, Dale Brett
- Date: 2013
- Subjects: Passeriformes -- Drakensberg Mountains , Passeriformes -- South Africa , Passeriformes -- Lesotho , Passeriformes -- Ecology -- Africa, Southern
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5828 , http://hdl.handle.net/10962/d1007696 , Passeriformes -- Drakensberg Mountains , Passeriformes -- South Africa , Passeriformes -- Lesotho , Passeriformes -- Ecology -- Africa, Southern
- Description: The Drakensberg rock-jumper (Chaetops aurantius) is a high-altitude passerine endemic to South Africa and Lesotho, living along a highly disrupted portion of the southern Great Escarpment from the Drakensberg highlands in the north-east to the Sneeuberg in the west, above an altitude of 1500 m. Along with the Cape rock-jumper (C. frenatus), this genus provides one of the stronger faunal links between the floristic biomes known as the Drakensberg Alpine Centre (DAC) and the Cape Floristic Region (CFR). Despite this, there is a significant lack of information regarding the species. The great majority of information is based on incidental observation, and no dedicated study has been undertaken. I conducted a series of field excursions between January 2011 and November 2012 in order to explore the rock-jumper’s feeding ecology, diet, habitat usage and genetic diversity. By trapping the birds, I was able to mark them individually with unique colour ring-combinations, and pluck a tail feather for genetic analyses. Observational data reveal that birds living close to their lower altitude threshold (c. 1500 m) are strongly habitat specific, living in boulder fields dominated by grassy vegetation. However, in areas at higher elevations (c. 2000 – 2500 m) this restriction seemed to fall away, possibly as a result of farming practices in those areas – higher grazing pressure results in shorter grass and less foraging effort for the birds. They live in groups ranging from pairs to small family groups of up to twelve individuals and maintain year round territories. Territory defence takes the form of calling and displaying from a prominent rock or boulder and becomes particularly noticeable just prior to, and during, the breeding period. No colour ringed individuals were ever spotted in boulder fields outside from where they had been initially ringed. This, coupled with the behaviour of territory maintenance, suggests a strongly sedentary lifestyle. Genetic inferences are constrained by a small sample size (only 25 birds were caught), but results indicate that some genetic isolation is occurring – a single haplotype was exhibited in birds from across the southern Escarpment, while seven private haplotypes show that any genetic mixing is likely to be historical rather than current. Historical gene flow would most probably have occurred during the last glacial maximum (18 000 years before present), when the cooler, drier conditions which are currently restricted to high peaks would have been much more extensive, thereby decreasing the distance required for effective dispersal. This is in agreement with the observation results, concluding that although there has been movement of birds across the southern Escarpment in the past, it does not appear to be occurring currently. However, this does leave plenty of scope for further work, particularly in the genetic diversity of the species, and in expanding the ecological observations to include the breeding biology.
- Full Text:
- Date Issued: 2013
- Authors: Morris, Dale Brett
- Date: 2013
- Subjects: Passeriformes -- Drakensberg Mountains , Passeriformes -- South Africa , Passeriformes -- Lesotho , Passeriformes -- Ecology -- Africa, Southern
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5828 , http://hdl.handle.net/10962/d1007696 , Passeriformes -- Drakensberg Mountains , Passeriformes -- South Africa , Passeriformes -- Lesotho , Passeriformes -- Ecology -- Africa, Southern
- Description: The Drakensberg rock-jumper (Chaetops aurantius) is a high-altitude passerine endemic to South Africa and Lesotho, living along a highly disrupted portion of the southern Great Escarpment from the Drakensberg highlands in the north-east to the Sneeuberg in the west, above an altitude of 1500 m. Along with the Cape rock-jumper (C. frenatus), this genus provides one of the stronger faunal links between the floristic biomes known as the Drakensberg Alpine Centre (DAC) and the Cape Floristic Region (CFR). Despite this, there is a significant lack of information regarding the species. The great majority of information is based on incidental observation, and no dedicated study has been undertaken. I conducted a series of field excursions between January 2011 and November 2012 in order to explore the rock-jumper’s feeding ecology, diet, habitat usage and genetic diversity. By trapping the birds, I was able to mark them individually with unique colour ring-combinations, and pluck a tail feather for genetic analyses. Observational data reveal that birds living close to their lower altitude threshold (c. 1500 m) are strongly habitat specific, living in boulder fields dominated by grassy vegetation. However, in areas at higher elevations (c. 2000 – 2500 m) this restriction seemed to fall away, possibly as a result of farming practices in those areas – higher grazing pressure results in shorter grass and less foraging effort for the birds. They live in groups ranging from pairs to small family groups of up to twelve individuals and maintain year round territories. Territory defence takes the form of calling and displaying from a prominent rock or boulder and becomes particularly noticeable just prior to, and during, the breeding period. No colour ringed individuals were ever spotted in boulder fields outside from where they had been initially ringed. This, coupled with the behaviour of territory maintenance, suggests a strongly sedentary lifestyle. Genetic inferences are constrained by a small sample size (only 25 birds were caught), but results indicate that some genetic isolation is occurring – a single haplotype was exhibited in birds from across the southern Escarpment, while seven private haplotypes show that any genetic mixing is likely to be historical rather than current. Historical gene flow would most probably have occurred during the last glacial maximum (18 000 years before present), when the cooler, drier conditions which are currently restricted to high peaks would have been much more extensive, thereby decreasing the distance required for effective dispersal. This is in agreement with the observation results, concluding that although there has been movement of birds across the southern Escarpment in the past, it does not appear to be occurring currently. However, this does leave plenty of scope for further work, particularly in the genetic diversity of the species, and in expanding the ecological observations to include the breeding biology.
- Full Text:
- Date Issued: 2013
The ecology and management of the large carnivore guild on Shamwari Game Reserve, Eastern Cape
- Authors: O'Brien, John William
- Date: 2013
- Subjects: Cheetah -- Behavior -- South Africa -- Shamwari Game Reserve Shamwari Game Reserve (South Africa) Carnivora -- South Africa -- Shamwari Game Reserve Wildlife conservation -- South Africa -- Shamwari Game Reserve Game reserves -- Management -- South Africa -- Shamwari Game Reserve Lion -- Behavior -- South Africa -- Shamwari Game Reserve Lion -- Ecology -- South Africa -- Shamwari Game Reserve African wild dog -- Ecology -- South Africa -- Shamwari Game Reserve Cheetah -- Ecology -- South Africa -- Shamwari Game Reserve Lion -- Food -- South Africa -- Shamwari Game Reserve Lion -- Food -- South Africa -- Shamwari Game Reserve Cheetah -- Food -- South Africa -- Shamwari Game Reserve African wild dog -- Behavior -- South Africa -- Shamwari Game Reserve African wild dog -- Food -- South Africa -- Shamwari Game Reserve Leopard -- Behavior -- South Africa -- Shamwari Game Reserve Leopard -- Ecology -- South Africa -- Shamwari Game Reserve Leopard -- Food --South Africa -- Shamwari Game Reserve
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:5609 , http://hdl.handle.net/10962/d1002604
- Description: Shamwari Game Reserve was the first enclosed conservation area in the Eastern Cape Province of South Africa to reintroduce free ranging lions, cheetahs, leopards and wild dogs back into their historic range. At that time (2000 – 2001), little information was available on the ecology and behaviour of these predators in the habitats of the Eastern Cape, and management decisions were based on assumptions and unfounded comparisons with extant populations but from quite different habitats. The aim of this study was therefore to obtain a better understanding of the feeding ecology and space use of the predator guild, and the carrying capacity of Shamwari Game Reserve to enable more informed management decisions. In addition, the reserve is a photographic based tourism venture and understanding both the ecological and financial sustainability of the predator guild was important. The diets of the predators were similar to those reported in other studies; larger predators killed a greater range of prey species than did smaller predators and a small number of prey species made up the majority of the kills. The larger predators had a higher mean kill mass than the smaller species and prey selection was influenced by prey size, prey abundance and prey habitat preference, and risk associated with hunting the species. Diet was flexible and responded to natural and management induced changes in prey abundance. There was a considerable overlap in space use by the lions, cheetahs and leopards with their core areas being centred on and around the Bushmans River. Space use was driven by resource distribution and landscape attributes, and by the presence of other predators of the same or different species. The long term viability of wild dog within the reserve was explored and the results confirmed that there was neither the required space nor the ecological processes and the wild dogs were removed from the reserve. A carrying capacity of the reserve for the predator guild was determined using the Maximum Sustainable Yield method to assess the potential prey species off take and a resultant density of 3.3 to 6.6 lion female equivalent units per 10 000 ha was established. The natural carrying capacity of the reserve with respect to predators will not sustain the tourism objectives and consequently prey supplementation was necessary to maintain predator density at levels high enough to sustain tourism. Under these conditions the large predator guild is still sustainable financially although careful, responsible management is needed to provide ecological sustainability.
- Full Text:
- Date Issued: 2013
- Authors: O'Brien, John William
- Date: 2013
- Subjects: Cheetah -- Behavior -- South Africa -- Shamwari Game Reserve Shamwari Game Reserve (South Africa) Carnivora -- South Africa -- Shamwari Game Reserve Wildlife conservation -- South Africa -- Shamwari Game Reserve Game reserves -- Management -- South Africa -- Shamwari Game Reserve Lion -- Behavior -- South Africa -- Shamwari Game Reserve Lion -- Ecology -- South Africa -- Shamwari Game Reserve African wild dog -- Ecology -- South Africa -- Shamwari Game Reserve Cheetah -- Ecology -- South Africa -- Shamwari Game Reserve Lion -- Food -- South Africa -- Shamwari Game Reserve Lion -- Food -- South Africa -- Shamwari Game Reserve Cheetah -- Food -- South Africa -- Shamwari Game Reserve African wild dog -- Behavior -- South Africa -- Shamwari Game Reserve African wild dog -- Food -- South Africa -- Shamwari Game Reserve Leopard -- Behavior -- South Africa -- Shamwari Game Reserve Leopard -- Ecology -- South Africa -- Shamwari Game Reserve Leopard -- Food --South Africa -- Shamwari Game Reserve
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:5609 , http://hdl.handle.net/10962/d1002604
- Description: Shamwari Game Reserve was the first enclosed conservation area in the Eastern Cape Province of South Africa to reintroduce free ranging lions, cheetahs, leopards and wild dogs back into their historic range. At that time (2000 – 2001), little information was available on the ecology and behaviour of these predators in the habitats of the Eastern Cape, and management decisions were based on assumptions and unfounded comparisons with extant populations but from quite different habitats. The aim of this study was therefore to obtain a better understanding of the feeding ecology and space use of the predator guild, and the carrying capacity of Shamwari Game Reserve to enable more informed management decisions. In addition, the reserve is a photographic based tourism venture and understanding both the ecological and financial sustainability of the predator guild was important. The diets of the predators were similar to those reported in other studies; larger predators killed a greater range of prey species than did smaller predators and a small number of prey species made up the majority of the kills. The larger predators had a higher mean kill mass than the smaller species and prey selection was influenced by prey size, prey abundance and prey habitat preference, and risk associated with hunting the species. Diet was flexible and responded to natural and management induced changes in prey abundance. There was a considerable overlap in space use by the lions, cheetahs and leopards with their core areas being centred on and around the Bushmans River. Space use was driven by resource distribution and landscape attributes, and by the presence of other predators of the same or different species. The long term viability of wild dog within the reserve was explored and the results confirmed that there was neither the required space nor the ecological processes and the wild dogs were removed from the reserve. A carrying capacity of the reserve for the predator guild was determined using the Maximum Sustainable Yield method to assess the potential prey species off take and a resultant density of 3.3 to 6.6 lion female equivalent units per 10 000 ha was established. The natural carrying capacity of the reserve with respect to predators will not sustain the tourism objectives and consequently prey supplementation was necessary to maintain predator density at levels high enough to sustain tourism. Under these conditions the large predator guild is still sustainable financially although careful, responsible management is needed to provide ecological sustainability.
- Full Text:
- Date Issued: 2013
The impact and control of waterweeds in the Southern Mozambique Basin rivers
- Authors: Langa, Sílvia da Fátima
- Date: 2013
- Subjects: Water hyacinth -- Mozambique Water ferns -- Mozambique Water lettuce -- Mozambique Salvinia molesta -- Mozambique Aquatic weeds -- Mozambique Invasive plants -- Mozambique Aquatic weeds -- Control -- Mozambique Invasive plants -- Control -- Mozambique Aquatic weeds -- Biological control -- Mozambique Invasive plants -- Biological control -- Mozambique Aquatic resources -- Management -- Mozambique Beetles -- Mozambique Insects as biological pest control agents -- Mozambique
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:5587 , http://hdl.handle.net/10962/d1001905
- Description: In Mozambique, establishment of aquatic weeds has been enhanced through the increased enrichment of water bodies by nutrient runoffs from human and agricultural wastes that lead to an increase in nitrate and phosphate in the water. The aquatic weeds, water hyacinth (Eichhornia crassipes), red water fern ( Azolla microphylla), water lettuce (Pistia stratiotes) and salvinia (Salvinia molesta) were found in most watercourses in Mozambique and are becoming aggressive in some watercourses, especially in the Umbeluzi and Incomati rivers. Farmers and people living along the rivers are aware of the negative impact of the water weeds because the large mats of weeds cause loss of shoreline and navigability along the rivers. Other commonly perceived effects of aquatic invasive plants in Mozambique rivers include: reduced navigable surface area; difficulties for fishermen, which reduces income; increased prevalence of insects and insect-borne disease, and decreased aesthetic value. The methods currently used for the control and management of the aquatic weeds are mechanical and manual control. Both methods are costly, time consuming, and only provide a short-term solution to the problem. The study found that the weevils Neochetina eichhorniae and N. bruchi were effective biological control agents in the study area but their impact is too gradual compared to the aggressive proliferation of water hyacinth. The one year lab-experiment clearly demonstrated that the water lettuce weed had a significant impact on the recruitment of macro-invertebrates to the artificial substrates, and water lettuce contributed to the reduction of oxygen in the water and consequent reduction of macro-invertebrate abundance and diversity. The biodiversity recovered at the same time in the pools containing water lettuce controlled by N. affinis and water lettuce controlled by herbicide, but richness and diversity of macro-invertebrates was higher in the water lettuce controlled by N affinis during the first sampling occasion compared to the water lettuce in pools controlled by herbicide, where macro-invertebrates increased only when DO levels recovered after water lettuce mat decay. The number of taxa recorded in this study is an indication of the significance of macro-invertebrates in an aquatic environment. This therefore emphasizes the need for more research efforts into macrophyte and macro-invertebrate associations in the aquatic system to better understand the implications of habitat modification arising from human activities. It will also enable us to be better equipped with a more appropriate ecological understanding for aquatic resources management.
- Full Text:
- Date Issued: 2013
- Authors: Langa, Sílvia da Fátima
- Date: 2013
- Subjects: Water hyacinth -- Mozambique Water ferns -- Mozambique Water lettuce -- Mozambique Salvinia molesta -- Mozambique Aquatic weeds -- Mozambique Invasive plants -- Mozambique Aquatic weeds -- Control -- Mozambique Invasive plants -- Control -- Mozambique Aquatic weeds -- Biological control -- Mozambique Invasive plants -- Biological control -- Mozambique Aquatic resources -- Management -- Mozambique Beetles -- Mozambique Insects as biological pest control agents -- Mozambique
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:5587 , http://hdl.handle.net/10962/d1001905
- Description: In Mozambique, establishment of aquatic weeds has been enhanced through the increased enrichment of water bodies by nutrient runoffs from human and agricultural wastes that lead to an increase in nitrate and phosphate in the water. The aquatic weeds, water hyacinth (Eichhornia crassipes), red water fern ( Azolla microphylla), water lettuce (Pistia stratiotes) and salvinia (Salvinia molesta) were found in most watercourses in Mozambique and are becoming aggressive in some watercourses, especially in the Umbeluzi and Incomati rivers. Farmers and people living along the rivers are aware of the negative impact of the water weeds because the large mats of weeds cause loss of shoreline and navigability along the rivers. Other commonly perceived effects of aquatic invasive plants in Mozambique rivers include: reduced navigable surface area; difficulties for fishermen, which reduces income; increased prevalence of insects and insect-borne disease, and decreased aesthetic value. The methods currently used for the control and management of the aquatic weeds are mechanical and manual control. Both methods are costly, time consuming, and only provide a short-term solution to the problem. The study found that the weevils Neochetina eichhorniae and N. bruchi were effective biological control agents in the study area but their impact is too gradual compared to the aggressive proliferation of water hyacinth. The one year lab-experiment clearly demonstrated that the water lettuce weed had a significant impact on the recruitment of macro-invertebrates to the artificial substrates, and water lettuce contributed to the reduction of oxygen in the water and consequent reduction of macro-invertebrate abundance and diversity. The biodiversity recovered at the same time in the pools containing water lettuce controlled by N. affinis and water lettuce controlled by herbicide, but richness and diversity of macro-invertebrates was higher in the water lettuce controlled by N affinis during the first sampling occasion compared to the water lettuce in pools controlled by herbicide, where macro-invertebrates increased only when DO levels recovered after water lettuce mat decay. The number of taxa recorded in this study is an indication of the significance of macro-invertebrates in an aquatic environment. This therefore emphasizes the need for more research efforts into macrophyte and macro-invertebrate associations in the aquatic system to better understand the implications of habitat modification arising from human activities. It will also enable us to be better equipped with a more appropriate ecological understanding for aquatic resources management.
- Full Text:
- Date Issued: 2013
The influence of overwash and breaching events on the spatial and temporal patterns in ichthyofauna community composition in a temporarily open/closed southern African estuary
- Authors: Tweddle, Gavin Paul
- Date: 2013
- Subjects: Estuarine fishes -- Africa, Southern Marine fishes -- Africa, Southern Fishes -- Breeding -- Africa, Southern Fishes -- Effect of habitat modification on -- Africa, Southern Fishes -- Spawning -- Africa, Southern Gobiidae -- Africa, Southern Estuaries -- Africa, Southern Estuarine ecology -- Africa, Southern
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:5610 , http://hdl.handle.net/10962/d1002957
- Description: This study assessed the importance of overwash and breaching events on the ichthyofaunal community structure in the medium-sized temporarily open/closed Mpekweni Estuary located on the southeast coastline of southern Africa. The fish in the littoral zone of the estuary were sampled using a 5m seine net while the channel region was sampled using two nets, a smaller meshed 30m seine net to target the estuarine spawning species and the juvenile estuarine-dependant marine spawners, and a larger meshed 50m seine net to target the larger marine and freshwater spawning species. Intensive monthly sampling over two years provided data on selected physico-chemical and biological parameters. During the two year sampling period from November 2005 to October 2007 the estuary breached in late July 2006 and remained open till the sandbar re-formed across the mouth in late December 2006. Thus, sampling encompassed three open/closed phases 1) initial closed period, 2) open period and 3) re-closed period after the berm was re-formed. The open period was divided into two phases 1) the out-flow phase and 2) the tidal phase. A total of 36 fish species representing 19 families were sampled using the various seine nets employed during the investigation. In the littoral zone, the estuarine spawners (Estuarine Utilisation Category, [EUC] I), mainly the Gobiidae, Glossogobius callidus, dominated the samples numerically and by biomass. The smaller estuarine spawning species sampled in the channel were numerically dominated by Gilchristella aestuaria in conjunction with two other EUC I species, Atherina breviceps and G. callidus. The estuarine-dependant marine spawners (EUC II), however, dominated the ichthyofaunal biomass of the channel. The abundance and biomass of the larger species targeted were dominated by estuarine-dependant marine spawning species (EUC II), principally Rhabdosargus holubi. During the closed periods of the estuary, total fish abundance and biomass displayed weak seasonal patterns. The breaching event and subsequent open period was associated with a decrease in the total abundances of fish in the littoral zone and channel of the estuary, reflecting the out-flow of estuarine biomass-rich water into the marine environment. The breaching event coincided with a shift in the community composition of the ichthyofauna, reflecting the recruitment of marine spawning species into the estuary. Numerical analysis identified two distinct spatial fish communities within the estuary, a community associated with the mouth region and one comprising the rest of the estuary. The absence of any further spatial patterns in the ichthyofaunal community structure within the Mpekweni Estuary appear to be ascribed to the virtual absence of horizontal patterns in physico-chemical and biological parameters recorded in the system. Cohort analyses were employed to determine possible recruitment events for selected estuarine and marine spawning species. The estuarine spawning species displayed continuous recruitment patterns throughout the study, which appeared to be unaffected by the breaching event. Conversely, the larger marine spawning species displayed multiple cohorts, indicating non-continuous recruitment. Subsequent retrospective analysis of cohorts for the different species identified summer recruitment peaks that coincided with the breaching event and open period. Minor recruitment of marine spawning species also occurred during overwash events. The recruitment of ichthyofauna into the estuary was quantified during three distinct hydrological events: overwash, out-flow phase immediately after breaching and tidal phase during the period when the mouth was open. Estimates of fish recruitment were highest during the outflow phase immediately after the estuary breached and declined as the estuary became tidally inundated with marine water. Although not as high as the outflow and tidal phases, recruitment was evident during overwash events. Results of the current study highlight the importance of both breaching and overwashing events in structuring the ichthyofaunal community composition in a medium-sized southern African temporarily open/closed estuary. These results are broadly in agreement with similar studies conducted both locally and in other regions of the world.
- Full Text:
- Date Issued: 2013
- Authors: Tweddle, Gavin Paul
- Date: 2013
- Subjects: Estuarine fishes -- Africa, Southern Marine fishes -- Africa, Southern Fishes -- Breeding -- Africa, Southern Fishes -- Effect of habitat modification on -- Africa, Southern Fishes -- Spawning -- Africa, Southern Gobiidae -- Africa, Southern Estuaries -- Africa, Southern Estuarine ecology -- Africa, Southern
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:5610 , http://hdl.handle.net/10962/d1002957
- Description: This study assessed the importance of overwash and breaching events on the ichthyofaunal community structure in the medium-sized temporarily open/closed Mpekweni Estuary located on the southeast coastline of southern Africa. The fish in the littoral zone of the estuary were sampled using a 5m seine net while the channel region was sampled using two nets, a smaller meshed 30m seine net to target the estuarine spawning species and the juvenile estuarine-dependant marine spawners, and a larger meshed 50m seine net to target the larger marine and freshwater spawning species. Intensive monthly sampling over two years provided data on selected physico-chemical and biological parameters. During the two year sampling period from November 2005 to October 2007 the estuary breached in late July 2006 and remained open till the sandbar re-formed across the mouth in late December 2006. Thus, sampling encompassed three open/closed phases 1) initial closed period, 2) open period and 3) re-closed period after the berm was re-formed. The open period was divided into two phases 1) the out-flow phase and 2) the tidal phase. A total of 36 fish species representing 19 families were sampled using the various seine nets employed during the investigation. In the littoral zone, the estuarine spawners (Estuarine Utilisation Category, [EUC] I), mainly the Gobiidae, Glossogobius callidus, dominated the samples numerically and by biomass. The smaller estuarine spawning species sampled in the channel were numerically dominated by Gilchristella aestuaria in conjunction with two other EUC I species, Atherina breviceps and G. callidus. The estuarine-dependant marine spawners (EUC II), however, dominated the ichthyofaunal biomass of the channel. The abundance and biomass of the larger species targeted were dominated by estuarine-dependant marine spawning species (EUC II), principally Rhabdosargus holubi. During the closed periods of the estuary, total fish abundance and biomass displayed weak seasonal patterns. The breaching event and subsequent open period was associated with a decrease in the total abundances of fish in the littoral zone and channel of the estuary, reflecting the out-flow of estuarine biomass-rich water into the marine environment. The breaching event coincided with a shift in the community composition of the ichthyofauna, reflecting the recruitment of marine spawning species into the estuary. Numerical analysis identified two distinct spatial fish communities within the estuary, a community associated with the mouth region and one comprising the rest of the estuary. The absence of any further spatial patterns in the ichthyofaunal community structure within the Mpekweni Estuary appear to be ascribed to the virtual absence of horizontal patterns in physico-chemical and biological parameters recorded in the system. Cohort analyses were employed to determine possible recruitment events for selected estuarine and marine spawning species. The estuarine spawning species displayed continuous recruitment patterns throughout the study, which appeared to be unaffected by the breaching event. Conversely, the larger marine spawning species displayed multiple cohorts, indicating non-continuous recruitment. Subsequent retrospective analysis of cohorts for the different species identified summer recruitment peaks that coincided with the breaching event and open period. Minor recruitment of marine spawning species also occurred during overwash events. The recruitment of ichthyofauna into the estuary was quantified during three distinct hydrological events: overwash, out-flow phase immediately after breaching and tidal phase during the period when the mouth was open. Estimates of fish recruitment were highest during the outflow phase immediately after the estuary breached and declined as the estuary became tidally inundated with marine water. Although not as high as the outflow and tidal phases, recruitment was evident during overwash events. Results of the current study highlight the importance of both breaching and overwashing events in structuring the ichthyofaunal community composition in a medium-sized southern African temporarily open/closed estuary. These results are broadly in agreement with similar studies conducted both locally and in other regions of the world.
- Full Text:
- Date Issued: 2013
The role of the sandprawn, Callichirus kraussi, as an ecosystem engineer in a temporarily open/closed Eastern Cape estuary, South Africa
- Authors: Njozela, Cuma
- Date: 2013
- Subjects: Estuarine biology -- South Africa -- Eastern Cape , Decapoda (Crustacea) -- South Africa -- Eastern Cape , Biotic communities -- South Africa -- Eastern Cape , Bioenergetics -- South Africa -- Eastern Cape , Shrimps -- South Africa -- Eastern Cape , Estuarine ecology -- South Africa -- Eastern Cape
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5583 , http://hdl.handle.net/10962/d1001539 , Estuarine biology -- South Africa -- Eastern Cape , Decapoda (Crustacea) -- South Africa -- Eastern Cape , Biotic communities -- South Africa -- Eastern Cape , Bioenergetics -- South Africa -- Eastern Cape , Shrimps -- South Africa -- Eastern Cape , Estuarine ecology -- South Africa -- Eastern Cape
- Description: The role of the sandprawn, Callichirus (=Callianassa) kraussi (Stebbing), as an ecosystem engineer was assessed in the lower reach of the temporarily open/closed Kasouga Estuary situated along the Eastern Cape coastline of southern Africa over the period April 2010 to June 2011. The study comprised two distinct components, a field study and a caging experiment. The field study assessed the correlation between sand prawn densities and selected physico-chemical (organic content of the sediment and bioturbation) and biological (microphytobenthic algal concentrations and macrobenthic abundance and biomass) variables in 50 quadrants in the lower reach of the estuary. Densities of the sand prawn within the quadrants ranged from 0 to 156 ind m⁻² (mean = 37 ind m⁻²). There were no significant correlations between the densities of the sandprawn and the estimates of the organic content of the sediment and the abundance and biomass of the macrofauna (P > 0.05 in all cases). Numerical analyses failed to identify any effect of the sandprawn density on the macrofaunal community structure. The rate of bioturbation was, however, strongly correlated to the sand prawn density. Similarly, the microphytobenthic alga concentrations were significantly negatively correlated to the sand prawn densities ((P < 0.05). The absence of any distinct impact of the sandprawn on the macrobenthic community structure appeared to be related to their low densities in the lower reach of the estuary during the study. To better understand the role of the sandprawn as an ecosystem engineer, a caging experiment was conducted using inclusion and exclusion treatments (n= 5 for each treatment). Densities of the sandprawn in the inclusion treatments (80 ind m⁻²) were in the range of the natural densities within the estuary. The experiment was conducted over a period of 18 weeks in the lower reach of the estuary during summer. The presence of the sandprawn, C kraussi, contributed to a significant decrease in the microphytobenthic algal concentrations and the abundance and biomass of the macrofauna (P < 0.05 in all cases). The decrease in the microphytobenthic algal concentrations in the presence of the sandprawn appeared to be related to the res-suspension of the sediments (bioturbation) generated by the burrowing and feeding activities of the sandprawn. The observed decrease in macrofaunal abundances and biomass in the inclusion treatments appeared to be mediated by both the decreased food availability (mainly the microphytobenthic algae) and the burial of organisms within the sediments. Numerical analysis indicated that the sandprawn did, however, not contribute to a change in the species composition of the macrofauna. Results of the current study indicate that C.kraussi plays an important role in structuring the invertebrate community and energy flow within temporarily/open closed Kasouga Estuary.
- Full Text:
- Date Issued: 2013
- Authors: Njozela, Cuma
- Date: 2013
- Subjects: Estuarine biology -- South Africa -- Eastern Cape , Decapoda (Crustacea) -- South Africa -- Eastern Cape , Biotic communities -- South Africa -- Eastern Cape , Bioenergetics -- South Africa -- Eastern Cape , Shrimps -- South Africa -- Eastern Cape , Estuarine ecology -- South Africa -- Eastern Cape
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5583 , http://hdl.handle.net/10962/d1001539 , Estuarine biology -- South Africa -- Eastern Cape , Decapoda (Crustacea) -- South Africa -- Eastern Cape , Biotic communities -- South Africa -- Eastern Cape , Bioenergetics -- South Africa -- Eastern Cape , Shrimps -- South Africa -- Eastern Cape , Estuarine ecology -- South Africa -- Eastern Cape
- Description: The role of the sandprawn, Callichirus (=Callianassa) kraussi (Stebbing), as an ecosystem engineer was assessed in the lower reach of the temporarily open/closed Kasouga Estuary situated along the Eastern Cape coastline of southern Africa over the period April 2010 to June 2011. The study comprised two distinct components, a field study and a caging experiment. The field study assessed the correlation between sand prawn densities and selected physico-chemical (organic content of the sediment and bioturbation) and biological (microphytobenthic algal concentrations and macrobenthic abundance and biomass) variables in 50 quadrants in the lower reach of the estuary. Densities of the sand prawn within the quadrants ranged from 0 to 156 ind m⁻² (mean = 37 ind m⁻²). There were no significant correlations between the densities of the sandprawn and the estimates of the organic content of the sediment and the abundance and biomass of the macrofauna (P > 0.05 in all cases). Numerical analyses failed to identify any effect of the sandprawn density on the macrofaunal community structure. The rate of bioturbation was, however, strongly correlated to the sand prawn density. Similarly, the microphytobenthic alga concentrations were significantly negatively correlated to the sand prawn densities ((P < 0.05). The absence of any distinct impact of the sandprawn on the macrobenthic community structure appeared to be related to their low densities in the lower reach of the estuary during the study. To better understand the role of the sandprawn as an ecosystem engineer, a caging experiment was conducted using inclusion and exclusion treatments (n= 5 for each treatment). Densities of the sandprawn in the inclusion treatments (80 ind m⁻²) were in the range of the natural densities within the estuary. The experiment was conducted over a period of 18 weeks in the lower reach of the estuary during summer. The presence of the sandprawn, C kraussi, contributed to a significant decrease in the microphytobenthic algal concentrations and the abundance and biomass of the macrofauna (P < 0.05 in all cases). The decrease in the microphytobenthic algal concentrations in the presence of the sandprawn appeared to be related to the res-suspension of the sediments (bioturbation) generated by the burrowing and feeding activities of the sandprawn. The observed decrease in macrofaunal abundances and biomass in the inclusion treatments appeared to be mediated by both the decreased food availability (mainly the microphytobenthic algae) and the burial of organisms within the sediments. Numerical analysis indicated that the sandprawn did, however, not contribute to a change in the species composition of the macrofauna. Results of the current study indicate that C.kraussi plays an important role in structuring the invertebrate community and energy flow within temporarily/open closed Kasouga Estuary.
- Full Text:
- Date Issued: 2013
Towards a cost-efficient & standardised monitoring protocol for subtidal reef fish in the Agulhas ecoregion of South Africa
- Bernard, Anthony Thomas Firth
- Authors: Bernard, Anthony Thomas Firth
- Date: 2013
- Subjects: Reef fishes -- South Africa Reef fishes -- Monitoring--South Africa Fish stock assessment -- South Africa Coastal zone management -- South Africa Fish communities -- South Africa Marine parks and reserves -- South Africa Marine resources conservation -- South Africa Marine biodiversity conservation -- South Africa
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:5585 , http://hdl.handle.net/10962/d1001674
- Description: Under the growing demand for marine fish resources, and the apparent and expected impacts of global climate change, there is a need to conduct long-term monitoring (LTM) to ensure effective management of resources and conservation of biodiversity. However LTM programmes often suffer from design deficiencies and fail to achieve their objectives. These deficiencies stem from the fact that insufficient consideration is afforded to the design phase, with programmes selecting methods that are not suitable to address the objectives, or are not cost-efficient, compromising the sustainability of the LTM. To facilitate the establishment of LTM programmes along the southern coast of South Africa, background research needed to be conducted to identify which methods were most appropriate for LTM of reef fish. This study presents a detailed field-based assessment of the suitability and cost-efficiency of monitoring methods for long-term monitoring of reef fish in the Agulhas Ecoregion of South Africa. The approach adopted to identify the method, or suite of methods most suited for LTM, involved (i) the selection of methods considered suitable for LTM, (ii) the individual assessment and optimisation of method performance, and (iii) the comparative assessment of the fish community sampled by the different methods. The most suited method(s) were then identified as those that provide the most comprehensive assessment of the fish community and had the highest cost-efficiency. The research was conducted between January 2008 and 2011 in the Tsitsikamma and Table Mountain National Park (TNP and TMNP, respectively) marine protected areas (MPAs) within the Agulhas Ecoregion. The methods selected included fish traps (FT), controlled angling (CA), underwater visual census (UVC), remote underwater video (RUV), baited RUV (BRUV) and remotely operated vehicles (ROV). The individual assessment and optimisation was conducted with the FT, UVC, RUV and BRUV methods. The assessment of the FT method aimed to identify the optimal soak time, and whether or not the size of the funnel entrance to the trap affected the catch. The results identified that larger funnel entrances caught more fish and soak times of 80 minutes produced the highest catches per unit effort. However the data were highly variable and the method detected few of the species typical of the region. Fish traps were also associated with high levels of mortality of fish post-release. The assessment of UVC strip transect method involved directly comparing the precision of data collected by researchers and volunteers using a novel double-observer technique (paired-transects). The results showed considerable error in both the volunteers and researchers data, however the researchers produced significantly higher precision data, compared to the volunteers. The distinction between researchers and volunteers was not evident in the data for the dominant species of fish. For all observers, the abundance of a species in the sample had a significant influence on its detectability, with locally scarce or rare species poorly detected. UVC was able to sample the majority of species typical of reefs in the region, however it appeared plagued by observer and detectability biases. The assessments of RUV and BRUV were conducted simultaneously which enabled the assessment of the effect of bait on the observed fish community. In addition the optimal deployment time for both methods to maximise species richness and abundance was determined. The results showed that BRUV, and to a lesser degree RUV, were able to effectively survey the reef fish community for the region with a 50 minute and 35 minute deployment time, respectively. Baited remote underwater video was especially good at detecting the invertebrate and generalist carnivores, and cartilaginous species. On the other hand, RUV was more effective at surveying the microinvertebrate carnivores. Remote underwater video was characterised by higher data variability, compared to BRUV, and was ultimately considered a less cost-efficient monitoring method. Comparative methods assessments were conducted during two field experiments with the FT, UVC and BRUV methods in the TMNP MPA, and the FT, CA, UVC, RUV, BRUV and ROV methods compared in the TNP MPA. The objectives of the comparison were to investigate differences in the fish communities observed with the different methods, and to determine the power of the data to detect an annual 10% growth in the fish populations over a period of five years. The results from the method comparison were in turn used to conduct the cost-benefit analysis to determine the efficiency of the different methods at achieving monitoring objectives requiring population data from multiple trophic and functional groups with the community, and from species of fisheries importance. The results indicated that FT, CA and ROV were ineffective at monitoring the reef fish community, although CA appeared to provide valuable data for the dominant fisheries species. Both CA and FT required minimal initial investment however, the variability in the data translated into high annual monitoring costs, as the required sampling effort was great. The ROV required the highest initial investment and was identified as the least cost-efficient method. Underwater visual census was able to adequately survey the bony fish within the community, however it did not detect the cartilaginous species. Underwater visual census required a large initial investment and was not cost-efficient, as a many samples were required to account for the variability in the data. Remote underwater video provided a comprehensive assessment of the reef fish community, however it too was associated with high levels of variability in the data, compared to BRUV, reducing its cost-efficiency. BRUV provided the most comprehensive assessment of the reef fish community and was associated with the highest cost-efficiency to address the community and fisheries species monitoring objectives. During the course of this research stereo-BRUV has gained considerable support as an effective reef fish monitoring method. Although not tested during this research, stereo-BRUV is preferred to BRUV as it provides accurate data on the size of fish. However, the initial investment of stereo-BRUV is over three times that required for the BRUV. Although it is recommended that a baited video technique be used for LTM in the Agulhas Ecoregion, the choice between BRUV and stereo-BRUV will depend on the specific objectives of the programme and the available budget at the implementing agency.
- Full Text:
- Date Issued: 2013
- Authors: Bernard, Anthony Thomas Firth
- Date: 2013
- Subjects: Reef fishes -- South Africa Reef fishes -- Monitoring--South Africa Fish stock assessment -- South Africa Coastal zone management -- South Africa Fish communities -- South Africa Marine parks and reserves -- South Africa Marine resources conservation -- South Africa Marine biodiversity conservation -- South Africa
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:5585 , http://hdl.handle.net/10962/d1001674
- Description: Under the growing demand for marine fish resources, and the apparent and expected impacts of global climate change, there is a need to conduct long-term monitoring (LTM) to ensure effective management of resources and conservation of biodiversity. However LTM programmes often suffer from design deficiencies and fail to achieve their objectives. These deficiencies stem from the fact that insufficient consideration is afforded to the design phase, with programmes selecting methods that are not suitable to address the objectives, or are not cost-efficient, compromising the sustainability of the LTM. To facilitate the establishment of LTM programmes along the southern coast of South Africa, background research needed to be conducted to identify which methods were most appropriate for LTM of reef fish. This study presents a detailed field-based assessment of the suitability and cost-efficiency of monitoring methods for long-term monitoring of reef fish in the Agulhas Ecoregion of South Africa. The approach adopted to identify the method, or suite of methods most suited for LTM, involved (i) the selection of methods considered suitable for LTM, (ii) the individual assessment and optimisation of method performance, and (iii) the comparative assessment of the fish community sampled by the different methods. The most suited method(s) were then identified as those that provide the most comprehensive assessment of the fish community and had the highest cost-efficiency. The research was conducted between January 2008 and 2011 in the Tsitsikamma and Table Mountain National Park (TNP and TMNP, respectively) marine protected areas (MPAs) within the Agulhas Ecoregion. The methods selected included fish traps (FT), controlled angling (CA), underwater visual census (UVC), remote underwater video (RUV), baited RUV (BRUV) and remotely operated vehicles (ROV). The individual assessment and optimisation was conducted with the FT, UVC, RUV and BRUV methods. The assessment of the FT method aimed to identify the optimal soak time, and whether or not the size of the funnel entrance to the trap affected the catch. The results identified that larger funnel entrances caught more fish and soak times of 80 minutes produced the highest catches per unit effort. However the data were highly variable and the method detected few of the species typical of the region. Fish traps were also associated with high levels of mortality of fish post-release. The assessment of UVC strip transect method involved directly comparing the precision of data collected by researchers and volunteers using a novel double-observer technique (paired-transects). The results showed considerable error in both the volunteers and researchers data, however the researchers produced significantly higher precision data, compared to the volunteers. The distinction between researchers and volunteers was not evident in the data for the dominant species of fish. For all observers, the abundance of a species in the sample had a significant influence on its detectability, with locally scarce or rare species poorly detected. UVC was able to sample the majority of species typical of reefs in the region, however it appeared plagued by observer and detectability biases. The assessments of RUV and BRUV were conducted simultaneously which enabled the assessment of the effect of bait on the observed fish community. In addition the optimal deployment time for both methods to maximise species richness and abundance was determined. The results showed that BRUV, and to a lesser degree RUV, were able to effectively survey the reef fish community for the region with a 50 minute and 35 minute deployment time, respectively. Baited remote underwater video was especially good at detecting the invertebrate and generalist carnivores, and cartilaginous species. On the other hand, RUV was more effective at surveying the microinvertebrate carnivores. Remote underwater video was characterised by higher data variability, compared to BRUV, and was ultimately considered a less cost-efficient monitoring method. Comparative methods assessments were conducted during two field experiments with the FT, UVC and BRUV methods in the TMNP MPA, and the FT, CA, UVC, RUV, BRUV and ROV methods compared in the TNP MPA. The objectives of the comparison were to investigate differences in the fish communities observed with the different methods, and to determine the power of the data to detect an annual 10% growth in the fish populations over a period of five years. The results from the method comparison were in turn used to conduct the cost-benefit analysis to determine the efficiency of the different methods at achieving monitoring objectives requiring population data from multiple trophic and functional groups with the community, and from species of fisheries importance. The results indicated that FT, CA and ROV were ineffective at monitoring the reef fish community, although CA appeared to provide valuable data for the dominant fisheries species. Both CA and FT required minimal initial investment however, the variability in the data translated into high annual monitoring costs, as the required sampling effort was great. The ROV required the highest initial investment and was identified as the least cost-efficient method. Underwater visual census was able to adequately survey the bony fish within the community, however it did not detect the cartilaginous species. Underwater visual census required a large initial investment and was not cost-efficient, as a many samples were required to account for the variability in the data. Remote underwater video provided a comprehensive assessment of the reef fish community, however it too was associated with high levels of variability in the data, compared to BRUV, reducing its cost-efficiency. BRUV provided the most comprehensive assessment of the reef fish community and was associated with the highest cost-efficiency to address the community and fisheries species monitoring objectives. During the course of this research stereo-BRUV has gained considerable support as an effective reef fish monitoring method. Although not tested during this research, stereo-BRUV is preferred to BRUV as it provides accurate data on the size of fish. However, the initial investment of stereo-BRUV is over three times that required for the BRUV. Although it is recommended that a baited video technique be used for LTM in the Agulhas Ecoregion, the choice between BRUV and stereo-BRUV will depend on the specific objectives of the programme and the available budget at the implementing agency.
- Full Text:
- Date Issued: 2013
Towards the development of a mycoinsecticide to control white grubs (Coleoptera: Scarabaeidae) in South African sugarcane
- Authors: Goble, Tarryn Anne
- Date: 2013
- Subjects: Insecticides -- Environmental aspects Insecticides -- Toxicology Beetles -- South Africa -- KwaZulu-Natal Beetles -- Control -- South Africa -- KwaZulu-Natal Coleophoridae -- South Africa -- KwaZulu-Natal Scarabaeidae -- South Africa -- KwaZulu-Natal Sugarcane -- Diseases and pests -- South Africa -- KwaZulu-Natal Sugarcane -- Diseases and pests -- Control -- South Africa -- KwaZulu-Natal , Insecticides
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:5586 , http://hdl.handle.net/10962/d1001748
- Description: In the KwaZulu-Natal (KZN) Midlands North region of South Africa, the importance and increased prevalence of endemic scarabaeids, particularly Hypopholis sommeri Burmeister and Schizonycha affinis Boheman (Coleoptera: Melolonthinae), as soil pests of sugarcane, and a need for their control was established. The development of a mycoinsecticide offers an environmentally friendly alternative to chemical insecticides. The identification of a diversity of white grub species, in two Scarabaeidae subfamilies, representing seven genera were collected in sugarcane as a pest complex. Hypopholis sommeri and S. affinis were the most prevalent species. The increased seasonal abundances, diversity and highly aggregated nature of these scarabaeid species in summer months, suggested that targeting and control strategies for these pests should be considered in this season. Increased rainfall, relative humidity and soil temperatures were linked to the increased occurrence of scarab adults and neonate grubs. Beauveria brongniartii (Saccardo) Petch epizootics were recorded at two sites in the KZN Midlands North on H. sommeri. Seventeen different fluorescently-labelled microsatellite PCR primers were used to target 78 isolates of Beauveria sp. DNA. Microsatellite data resolved two distinct clusters of Beauveria isolates which represented the Beauveria bassiana senso stricto (Balsamo) Vuillemin and B. brongniartii species groups. These groupings were supported by two gene regions, the nuclear ribosomal Internal Transcribed Spacer (ITS) and the nuclear B locus (Bloc) gene of which 23 exemplar Beauveria isolates were represented and sequenced. When microsatellite data were analysed, 26 haplotypes among 58 isolates of B. brongniartii were distinguished. Relatively low levels of genetic diversity were detected in B. brongniartii and isolates were shown to be closely related. There was no genetic differentiation between the two sites, Harden Heights and Canema in the KZN Midlands North. High gene flow from swarming H. sommeri beetles is the proposed mechanism for this lack of genetic differentiation between populations. Microsatellite analyses also showed that B. brongniartii conidia were being cycled from arboreal to subterranean habitats in the environment by H. sommeri beetles. This was the first record of this species of fungus causing epizootics on the larvae and adults of H. sommeri in South Africa. The virulence of 21 isolates of Beauveria brongniartii and two isolates of B. bassiana were evaluated against the adults and larvae of S. affinis and the adults of H. sommeri and Tenebrio molitor Linnaeus (Coleoptera: Tenebrionidae). Despite being closely-related, B. brongniartii isolates varied significantly in their virulence towards different hosts and highlighted the host specific nature of B. brongniartii towards S. affinis when compared to B. bassiana. Adults of S. affinis were significantly more susceptible to B. brongniartii isolates than the second (L2) or third instar (L3) grubs. The median lethal time (LT₅₀) of the most virulent B. brongniartii isolate (C13) against S. affinis adults was 7.8 days and probit analysis estimated a median lethal concentration (LC₅₀) of 4.4×10⁷ conidia/ml⁻¹. When L2 grubs were treated with a concentration of 1.0×10⁸ conidia/ml⁻¹, B. brongniartii isolates HHWG1, HHB39A and C17 caused mortality in L2 grubs within 18.4-19.8 days (LT₅₀). Beauveria brongniartii isolate HHWG1 was tested against the L3 grubs of S. affinis at four different concentrations. At the lowest concentration (1×10⁶ conidia/ml⁻¹), the LT₅₀ was 25.8 days, and at the highest concentration (1×10⁹ conidia/ml⁻¹) the LT₅₀ dropped to 15.1 days. The persistence of B. bassiana isolate 4222 formulated on rice and wheat bran and buried at eight field sites in the KZN Midlands North was evaluated by plating out a suspension of treated soil onto a selective medium. All eight field sites showed a significant decline in B. bassiana CFUs per gram of soil over time, with few conidia still present in the samples after a year. Greater declines in CFUs were observed at some sites but there were no significant differences observed in the persistence of conidia formulated on rice or wheat bran as carriers. Overall, poor persistence of B. bassiana isolate 4222 was attributed to suboptimum temperatures, rainfall, which rapidly degraded the nutritive carriers, attenuated fungal genotype and the action of antagonistic soil microbes. Growers’ perceptions of white grubs as pests and the feasibility of a mycoinsecticide market were evaluated by means of a semi-structured questionnaire. The study showed that the reduced feasibility of application, general lack of potential demand for a product, high cost factors and most importantly, the lack of pest perception, were factors which would negatively affect the adoption of a granular mycoinsecticide. Growers however exhibited a positive attitude towards mycoinsecticides, and showed all the relevant attributes for successful technology adoption. It is recommended that because B. brongniartii epizootics were recorded on target pests which indicated good host specificity, dispersal ability and persistence of the fungus in the intended environment of application; that a mycoinsecticide based on this fungal species be developed. What will likely increase adoption and success of a mycoinsecticide is collaboration between various industries partners to increases market potential in other crops such as Acacia mearnsii De Wild (Fabales: Fabaceae).
- Full Text:
- Date Issued: 2013
- Authors: Goble, Tarryn Anne
- Date: 2013
- Subjects: Insecticides -- Environmental aspects Insecticides -- Toxicology Beetles -- South Africa -- KwaZulu-Natal Beetles -- Control -- South Africa -- KwaZulu-Natal Coleophoridae -- South Africa -- KwaZulu-Natal Scarabaeidae -- South Africa -- KwaZulu-Natal Sugarcane -- Diseases and pests -- South Africa -- KwaZulu-Natal Sugarcane -- Diseases and pests -- Control -- South Africa -- KwaZulu-Natal , Insecticides
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:5586 , http://hdl.handle.net/10962/d1001748
- Description: In the KwaZulu-Natal (KZN) Midlands North region of South Africa, the importance and increased prevalence of endemic scarabaeids, particularly Hypopholis sommeri Burmeister and Schizonycha affinis Boheman (Coleoptera: Melolonthinae), as soil pests of sugarcane, and a need for their control was established. The development of a mycoinsecticide offers an environmentally friendly alternative to chemical insecticides. The identification of a diversity of white grub species, in two Scarabaeidae subfamilies, representing seven genera were collected in sugarcane as a pest complex. Hypopholis sommeri and S. affinis were the most prevalent species. The increased seasonal abundances, diversity and highly aggregated nature of these scarabaeid species in summer months, suggested that targeting and control strategies for these pests should be considered in this season. Increased rainfall, relative humidity and soil temperatures were linked to the increased occurrence of scarab adults and neonate grubs. Beauveria brongniartii (Saccardo) Petch epizootics were recorded at two sites in the KZN Midlands North on H. sommeri. Seventeen different fluorescently-labelled microsatellite PCR primers were used to target 78 isolates of Beauveria sp. DNA. Microsatellite data resolved two distinct clusters of Beauveria isolates which represented the Beauveria bassiana senso stricto (Balsamo) Vuillemin and B. brongniartii species groups. These groupings were supported by two gene regions, the nuclear ribosomal Internal Transcribed Spacer (ITS) and the nuclear B locus (Bloc) gene of which 23 exemplar Beauveria isolates were represented and sequenced. When microsatellite data were analysed, 26 haplotypes among 58 isolates of B. brongniartii were distinguished. Relatively low levels of genetic diversity were detected in B. brongniartii and isolates were shown to be closely related. There was no genetic differentiation between the two sites, Harden Heights and Canema in the KZN Midlands North. High gene flow from swarming H. sommeri beetles is the proposed mechanism for this lack of genetic differentiation between populations. Microsatellite analyses also showed that B. brongniartii conidia were being cycled from arboreal to subterranean habitats in the environment by H. sommeri beetles. This was the first record of this species of fungus causing epizootics on the larvae and adults of H. sommeri in South Africa. The virulence of 21 isolates of Beauveria brongniartii and two isolates of B. bassiana were evaluated against the adults and larvae of S. affinis and the adults of H. sommeri and Tenebrio molitor Linnaeus (Coleoptera: Tenebrionidae). Despite being closely-related, B. brongniartii isolates varied significantly in their virulence towards different hosts and highlighted the host specific nature of B. brongniartii towards S. affinis when compared to B. bassiana. Adults of S. affinis were significantly more susceptible to B. brongniartii isolates than the second (L2) or third instar (L3) grubs. The median lethal time (LT₅₀) of the most virulent B. brongniartii isolate (C13) against S. affinis adults was 7.8 days and probit analysis estimated a median lethal concentration (LC₅₀) of 4.4×10⁷ conidia/ml⁻¹. When L2 grubs were treated with a concentration of 1.0×10⁸ conidia/ml⁻¹, B. brongniartii isolates HHWG1, HHB39A and C17 caused mortality in L2 grubs within 18.4-19.8 days (LT₅₀). Beauveria brongniartii isolate HHWG1 was tested against the L3 grubs of S. affinis at four different concentrations. At the lowest concentration (1×10⁶ conidia/ml⁻¹), the LT₅₀ was 25.8 days, and at the highest concentration (1×10⁹ conidia/ml⁻¹) the LT₅₀ dropped to 15.1 days. The persistence of B. bassiana isolate 4222 formulated on rice and wheat bran and buried at eight field sites in the KZN Midlands North was evaluated by plating out a suspension of treated soil onto a selective medium. All eight field sites showed a significant decline in B. bassiana CFUs per gram of soil over time, with few conidia still present in the samples after a year. Greater declines in CFUs were observed at some sites but there were no significant differences observed in the persistence of conidia formulated on rice or wheat bran as carriers. Overall, poor persistence of B. bassiana isolate 4222 was attributed to suboptimum temperatures, rainfall, which rapidly degraded the nutritive carriers, attenuated fungal genotype and the action of antagonistic soil microbes. Growers’ perceptions of white grubs as pests and the feasibility of a mycoinsecticide market were evaluated by means of a semi-structured questionnaire. The study showed that the reduced feasibility of application, general lack of potential demand for a product, high cost factors and most importantly, the lack of pest perception, were factors which would negatively affect the adoption of a granular mycoinsecticide. Growers however exhibited a positive attitude towards mycoinsecticides, and showed all the relevant attributes for successful technology adoption. It is recommended that because B. brongniartii epizootics were recorded on target pests which indicated good host specificity, dispersal ability and persistence of the fungus in the intended environment of application; that a mycoinsecticide based on this fungal species be developed. What will likely increase adoption and success of a mycoinsecticide is collaboration between various industries partners to increases market potential in other crops such as Acacia mearnsii De Wild (Fabales: Fabaceae).
- Full Text:
- Date Issued: 2013
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