Assimilation of organic and inorganic nutrients by Erica root fungi from the fynbos ecosystem
- Bizabani, Christine, Dames, Joanna F
- Authors: Bizabani, Christine , Dames, Joanna F
- Date: 2016
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/444079 , vital:74183 , https://doi.org/10.1016/j.funbio.2015.11.006
- Description: Erica dominate the fynbos ecosystem, which is characterized by acidic soils that are rich in organic matter. The ericaceae associate with ericoid mycorrhizal (ERM) fungi for survival. In this study fungal biomass accumulation in vitro was used to determine nutrient utilisation of various inorganic and organic substrates. This is an initial step towards establishment of the ecological roles of typical ERM fungi and other root fungi associated with Erica plants, with regard to host nutrition. Meliniomyces sp., Acremonium implicatum, Leohumicola sp., Cryptosporiopsis erica, Oidiodendron maius and an unidentified Helotiales fungus were selected from fungi previously isolated and identified from Erica roots. Sole nitrogen sources ammonium, nitrate, arginine and Bovine Serum Albumin (BSA) were tested. Meliniomyces and Leohumicola species were able to utilise BSA effectively. Phosphorus nutrition was tested using orthophosphate, sodium inositol hexaphosphate and DNA. Most isolates preferred orthophosphate. Meliniomyces sp. and A. implicatum were able to accumulate significant biomass using DNA. Carbon utilisation was tested using glucose, cellobiose, carboxymethylcellulose, pectin and tannic acid substrates. All fungal isolates produced high biomass on glucose and cellobiose. The ability to utilize organic nutrient sources in culture, illustrates their potential role of these fungi in host nutrition in the fynbos ecosystem.
- Full Text:
- Date Issued: 2016
- Authors: Bizabani, Christine , Dames, Joanna F
- Date: 2016
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/444079 , vital:74183 , https://doi.org/10.1016/j.funbio.2015.11.006
- Description: Erica dominate the fynbos ecosystem, which is characterized by acidic soils that are rich in organic matter. The ericaceae associate with ericoid mycorrhizal (ERM) fungi for survival. In this study fungal biomass accumulation in vitro was used to determine nutrient utilisation of various inorganic and organic substrates. This is an initial step towards establishment of the ecological roles of typical ERM fungi and other root fungi associated with Erica plants, with regard to host nutrition. Meliniomyces sp., Acremonium implicatum, Leohumicola sp., Cryptosporiopsis erica, Oidiodendron maius and an unidentified Helotiales fungus were selected from fungi previously isolated and identified from Erica roots. Sole nitrogen sources ammonium, nitrate, arginine and Bovine Serum Albumin (BSA) were tested. Meliniomyces and Leohumicola species were able to utilise BSA effectively. Phosphorus nutrition was tested using orthophosphate, sodium inositol hexaphosphate and DNA. Most isolates preferred orthophosphate. Meliniomyces sp. and A. implicatum were able to accumulate significant biomass using DNA. Carbon utilisation was tested using glucose, cellobiose, carboxymethylcellulose, pectin and tannic acid substrates. All fungal isolates produced high biomass on glucose and cellobiose. The ability to utilize organic nutrient sources in culture, illustrates their potential role of these fungi in host nutrition in the fynbos ecosystem.
- Full Text:
- Date Issued: 2016
Detection of plant growth enhancing features in psychrotolerant yeasts from Patagonia (Argentina)
- Mestre, María C, Fontenla, Sonia, Bruzone, Marie C, Fernández, Natalia V, Dames, Joanna F
- Authors: Mestre, María C , Fontenla, Sonia , Bruzone, Marie C , Fernández, Natalia V , Dames, Joanna F
- Date: 2016
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/448581 , vital:74744 , https://doi.org/10.1002/jobm.201500728
- Description: This study explores the biotechnological potential for plant production of twelve psychrotolerant yeasts strains from Northwest‐Patagonia. These strains were isolated from different substrates associated with Nothofagus sp. in native forests and Vaccinium sp. in a commercial plantation. Yeasts characterization was performed using in vitro assays to evaluate the production of auxin‐like compounds and siderophores, ability to solubilize inorganic phosphate and to reduce common plant pathogen growth. Strain YF8.3 identified as Aureobasidium pullullans was the main producer of auxin‐like and siderophores compounds. Phosphate solubilization was a characteristic observed by strains L8.12 and CRUB1775 identified as Holtermaniella takashimae and Candida maritima, respectively. Different yeast strains were able to inhibit the growth of Verticillium dahliae PPRI5569 and Pythium aphanidermatum PPRI 9009, but they all failed to inhibit the growth of Fusarium oxysporum PPRI5457. The present study, suggests that yeasts present in different environments in Northwestern‐Patagonian have physiological in vitro features which may influence plant growth. These results are promising for the developing of biological products based on Patagonian yeasts for plant production in cold‐temperate regions.
- Full Text:
- Date Issued: 2016
- Authors: Mestre, María C , Fontenla, Sonia , Bruzone, Marie C , Fernández, Natalia V , Dames, Joanna F
- Date: 2016
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/448581 , vital:74744 , https://doi.org/10.1002/jobm.201500728
- Description: This study explores the biotechnological potential for plant production of twelve psychrotolerant yeasts strains from Northwest‐Patagonia. These strains were isolated from different substrates associated with Nothofagus sp. in native forests and Vaccinium sp. in a commercial plantation. Yeasts characterization was performed using in vitro assays to evaluate the production of auxin‐like compounds and siderophores, ability to solubilize inorganic phosphate and to reduce common plant pathogen growth. Strain YF8.3 identified as Aureobasidium pullullans was the main producer of auxin‐like and siderophores compounds. Phosphate solubilization was a characteristic observed by strains L8.12 and CRUB1775 identified as Holtermaniella takashimae and Candida maritima, respectively. Different yeast strains were able to inhibit the growth of Verticillium dahliae PPRI5569 and Pythium aphanidermatum PPRI 9009, but they all failed to inhibit the growth of Fusarium oxysporum PPRI5457. The present study, suggests that yeasts present in different environments in Northwestern‐Patagonian have physiological in vitro features which may influence plant growth. These results are promising for the developing of biological products based on Patagonian yeasts for plant production in cold‐temperate regions.
- Full Text:
- Date Issued: 2016
Entomopathogenic fungi as control agents of Thaumatotibia leucotreta in citrus orchards: field efficacy and persistence
- Coombes, Candice A, Hill, Martin P, Moore, Sean D, Dames, Joanna F
- Authors: Coombes, Candice A , Hill, Martin P , Moore, Sean D , Dames, Joanna F
- Date: 2016
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/417956 , vital:71497 , xlink:href="https://doi.org/10.1007/s10526-016-9756-x"
- Description: Entomopathogenic fungal isolates Beauveria bassiana (Balsamo) Vuillemin (Hypocreales: Cordycipitaceae) strain G Ar 17 B3 and Metarhizium anisopliae (Metchnikoff) Sorokin (Hypocreales: Clavicipitaceae) strain FCM Ar 23 B3 have been identified as effective control agents of the important citrus pest Thaumatotibia leucotreta (Meyrick) (Lepidoptera: Tortricidae) wandering fifth instars under laboratory conditions. This study is the first report on the ability of these isolates to persist and reduce T. leucotreta infestation in commercial citrus orchards in South Africa. A reduction in pest infestation of between 28 and 82 % upon trial completion was reported. Both isolates were recovered from soil samples collected five months post-application with high host density and moderate to high soil moisture favouring recovery. Low soil moisture negatively influenced the persistence of both isolates and the control efficiency of B. bassiana. These results provide evidence and support for the future use of these isolates against T. leucotreta thus warranting further investigation.
- Full Text:
- Date Issued: 2016
- Authors: Coombes, Candice A , Hill, Martin P , Moore, Sean D , Dames, Joanna F
- Date: 2016
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/417956 , vital:71497 , xlink:href="https://doi.org/10.1007/s10526-016-9756-x"
- Description: Entomopathogenic fungal isolates Beauveria bassiana (Balsamo) Vuillemin (Hypocreales: Cordycipitaceae) strain G Ar 17 B3 and Metarhizium anisopliae (Metchnikoff) Sorokin (Hypocreales: Clavicipitaceae) strain FCM Ar 23 B3 have been identified as effective control agents of the important citrus pest Thaumatotibia leucotreta (Meyrick) (Lepidoptera: Tortricidae) wandering fifth instars under laboratory conditions. This study is the first report on the ability of these isolates to persist and reduce T. leucotreta infestation in commercial citrus orchards in South Africa. A reduction in pest infestation of between 28 and 82 % upon trial completion was reported. Both isolates were recovered from soil samples collected five months post-application with high host density and moderate to high soil moisture favouring recovery. Low soil moisture negatively influenced the persistence of both isolates and the control efficiency of B. bassiana. These results provide evidence and support for the future use of these isolates against T. leucotreta thus warranting further investigation.
- Full Text:
- Date Issued: 2016
Ericoid fungal inoculation of blueberry under commercial production in South Africa
- Bizabani, Christine, Fontenla, Sonia, Dames, Joanna F
- Authors: Bizabani, Christine , Fontenla, Sonia , Dames, Joanna F
- Date: 2016
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/448610 , vital:74746 , https://doi.org/10.1016/j.scienta.2016.06.029
- Description: Ericoid mycorrhizal (ERM) fungi are known to enhance growth of plants belonging to the Ericaceae family. However, the outcomes of root-fungal associations in this family are influenced by several factors such as soil nutrient status, climatic conditions, host variety and fungal partner. The aim of this study was (i) to determine whether symbiotic fungal structures form in roots of Misty (Vaccinium corymbosum) and Brightwell (V. ashei) blueberry varieties, following inoculation with Leohumicola, Oidiodendron maius and Meliniomyces fungal species, and (ii) evaluate inoculation effects on the growth of blueberry varieties. The study was conducted for 60 weeks under commercial production conditions at Amathole Berries, Sutterheim, South Africa. All three fungi were isolated from Erica plants growing naturally in Albany Centre of Endemism of South Africa. All ERM formed mycorrhizal structures characteristic of typical ericoid colonisation in the roots of both Misty and Brightwell. However, percentage colonisation was low. The highest colonisation percentage, 20.4%, was observed in Misty inoculated with Oidiodendron maius. Colonisation was significantly different compared to un-inoculated controls in the Misty variety. In both varieties inoculated with either Leohumicola or Meliniomyces did not improve (p > 0.05) shoot growth and biomass. All fungal species improved root biomass in Misty but not in Brightwell. This indicates that ERM inoculation may potentially benefit plant of Misty and that responses to ERM inoculation vary between blueberry varieties.
- Full Text:
- Date Issued: 2016
- Authors: Bizabani, Christine , Fontenla, Sonia , Dames, Joanna F
- Date: 2016
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/448610 , vital:74746 , https://doi.org/10.1016/j.scienta.2016.06.029
- Description: Ericoid mycorrhizal (ERM) fungi are known to enhance growth of plants belonging to the Ericaceae family. However, the outcomes of root-fungal associations in this family are influenced by several factors such as soil nutrient status, climatic conditions, host variety and fungal partner. The aim of this study was (i) to determine whether symbiotic fungal structures form in roots of Misty (Vaccinium corymbosum) and Brightwell (V. ashei) blueberry varieties, following inoculation with Leohumicola, Oidiodendron maius and Meliniomyces fungal species, and (ii) evaluate inoculation effects on the growth of blueberry varieties. The study was conducted for 60 weeks under commercial production conditions at Amathole Berries, Sutterheim, South Africa. All three fungi were isolated from Erica plants growing naturally in Albany Centre of Endemism of South Africa. All ERM formed mycorrhizal structures characteristic of typical ericoid colonisation in the roots of both Misty and Brightwell. However, percentage colonisation was low. The highest colonisation percentage, 20.4%, was observed in Misty inoculated with Oidiodendron maius. Colonisation was significantly different compared to un-inoculated controls in the Misty variety. In both varieties inoculated with either Leohumicola or Meliniomyces did not improve (p > 0.05) shoot growth and biomass. All fungal species improved root biomass in Misty but not in Brightwell. This indicates that ERM inoculation may potentially benefit plant of Misty and that responses to ERM inoculation vary between blueberry varieties.
- Full Text:
- Date Issued: 2016
Screening of entomopathogenic fungi against citrus mealybug, Plannococcus citri (Hemiptera: Pseudococcidae)
- Chartier FitzGerald, Veronique C, Hill, Martin P, Moore, Sean D, Dames, Joanna F
- Authors: Chartier FitzGerald, Veronique C , Hill, Martin P , Moore, Sean D , Dames, Joanna F
- Date: 2016
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/407059 , vital:70333 , xlink:href="https://hdl.handle.net/10520/EJC195093"
- Description: Planococcus citri (citrus mealybug) is a common and damaging citrus crop pest which has proven difficult to control using conventional methods, such as chemical pesticides and insect growth regulators, particularly late in the citrus growing season. The virulence of two entomopathogenic fungal species was studied in laboratory bioassays against the crawlers and adults of P. citri. Isolates of Metarhizium anisopliae and Beauveria bassiana, collected from citrus orchards in the Eastern Cape Province in South Africa, were verified using and molecular techniques. Mealybug bioassays were performed in 24-well plates. Beauveria bassiana (GAR 17 B3) and M. anisopliae (FCM AR 23 B3) isolates both resulted in 67.5 % mortality of mealybug crawlers and B. bassiana (GB AR 23 13 3) resulted in 64 % crawler mortality with concentrations of 1 x 107 conidia/ml. These three isolates were further tested in multipledose bioassays to determine the median lethal concentration (LC50), which were 5.29 x 105conidia/ml for the M. anisopliae isolate (FCM AR 23 B3), 4.25 x 106 conidia/ml for B. bassiana (GAR 17 B3), and 6.65 x 107 conidia/ml B. bassiana (GB AR 23 13 3) for crawlers, respectively. The results of this study suggested that two isolates (M. anisopliae FCM AR 23 B3 and B. bassiana GAR 17 B3) showed potential for further development as biological control agents against citrus mealybug. Further research would be required to determine their ability to perform under field conditions.
- Full Text:
- Date Issued: 2016
- Authors: Chartier FitzGerald, Veronique C , Hill, Martin P , Moore, Sean D , Dames, Joanna F
- Date: 2016
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/407059 , vital:70333 , xlink:href="https://hdl.handle.net/10520/EJC195093"
- Description: Planococcus citri (citrus mealybug) is a common and damaging citrus crop pest which has proven difficult to control using conventional methods, such as chemical pesticides and insect growth regulators, particularly late in the citrus growing season. The virulence of two entomopathogenic fungal species was studied in laboratory bioassays against the crawlers and adults of P. citri. Isolates of Metarhizium anisopliae and Beauveria bassiana, collected from citrus orchards in the Eastern Cape Province in South Africa, were verified using and molecular techniques. Mealybug bioassays were performed in 24-well plates. Beauveria bassiana (GAR 17 B3) and M. anisopliae (FCM AR 23 B3) isolates both resulted in 67.5 % mortality of mealybug crawlers and B. bassiana (GB AR 23 13 3) resulted in 64 % crawler mortality with concentrations of 1 x 107 conidia/ml. These three isolates were further tested in multipledose bioassays to determine the median lethal concentration (LC50), which were 5.29 x 105conidia/ml for the M. anisopliae isolate (FCM AR 23 B3), 4.25 x 106 conidia/ml for B. bassiana (GAR 17 B3), and 6.65 x 107 conidia/ml B. bassiana (GB AR 23 13 3) for crawlers, respectively. The results of this study suggested that two isolates (M. anisopliae FCM AR 23 B3 and B. bassiana GAR 17 B3) showed potential for further development as biological control agents against citrus mealybug. Further research would be required to determine their ability to perform under field conditions.
- Full Text:
- Date Issued: 2016
Soil biota in a megadiverse country current knowledge and future research directions in South Africa
- Janion-Scheepers, Charlene, Measey, John, Braschler, Brigitte, Chown, Steven L, Coetzee, Louisee, Colville, Jonathan F, Dames, Joanna F, Davies, Andrew B, Davies, Sarah J, Davis, Adrian L V, Dippenaar-Schoeman, Ansi S, Duffy, Grant A, Fouries, Driekie, Griffiths, Charles, Haddad, Charles R, Hamer, Michelle, Herbert, David G, Hugo-Coetzee, Elizabeth A, Jacobs, Adriaanas, Jacobs, Karin, Jansen van Rensburg, Candice, Lamani, Siviwe, Lotz, Leon N, vdm Louw, Schalk, Lyle, Robin, Malan, Antoinette P, Marais, Mariette, Neethling, Jan-Andries, Nxele, Thembeka, Plisko, Danuta J, Prendini, Lorenzo, Rink, Ariella N, Swart, Antionette, Theron, Pieter, Truter, Mariette, Ueckermnn, Eddie, Uys, Vivienne M, Villet, Martin H, Willows-Munro, Sandy, Wilson, R U
- Authors: Janion-Scheepers, Charlene , Measey, John , Braschler, Brigitte , Chown, Steven L , Coetzee, Louisee , Colville, Jonathan F , Dames, Joanna F , Davies, Andrew B , Davies, Sarah J , Davis, Adrian L V , Dippenaar-Schoeman, Ansi S , Duffy, Grant A , Fouries, Driekie , Griffiths, Charles , Haddad, Charles R , Hamer, Michelle , Herbert, David G , Hugo-Coetzee, Elizabeth A , Jacobs, Adriaanas , Jacobs, Karin , Jansen van Rensburg, Candice , Lamani, Siviwe , Lotz, Leon N , vdm Louw, Schalk , Lyle, Robin , Malan, Antoinette P , Marais, Mariette , Neethling, Jan-Andries , Nxele, Thembeka , Plisko, Danuta J , Prendini, Lorenzo , Rink, Ariella N , Swart, Antionette , Theron, Pieter , Truter, Mariette , Ueckermnn, Eddie , Uys, Vivienne M , Villet, Martin H , Willows-Munro, Sandy , Wilson, R U
- Date: 2016
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/448682 , vital:74751 , https://doi.org/10.1016/j.pedobi.2016.03.004
- Description: Soils are integral to agricultural productivity, biodiversity, and the maintenance of ecosystem services. However, soil ecosystem research depends on foundational biological knowledge that is often missing. In this review, we present a comprehensive, cross-taxa overview of the soil biota of South Africa. We discuss the literature and sampling methods used to assess soil biota, the available taxonomic expertise and main collections within South Africa, the availability of identification guides and online resources, and the status and distribution of described species. We include species lists for all South African soil biota and, for groups with sufficient distribution records, species richness maps. Despite South Africa being only 0.8% of the earth’s terrestrial area, it contains nearly 1.8% of the world’s described soil species (mean per taxon 3.64%, range 0.17–15%; n = 36 groups), with nematodes and earthworms showing a remarkable (6.4 and 7.7%) proportion of globally described diversity. Endemism is high for most groups, ranging from 33–92%. However, major knowledge gaps exist for most soil biota groups. While sampling has been relatively comprehensive in some areas for a few groups (particularly those with direct socioeconomic impacts), the Nama-Karoo, Northern Cape and Eastern Cape are poorly sampled. Natural soils in biodiversity hotspots, such as the Fynbos Biome, are also understudied. We argue that a more integrative approach to acquiring foundational knowledge in soil biodiversity is needed if applied soil research is to be effective in ensuring sustainable soil health. Considerable investment will be required to bring our understanding of the soil biodiversity in this megadiverse region to a level where the Millennium Development Goals can be reached.
- Full Text:
- Date Issued: 2016
Soil biota in a megadiverse country current knowledge and future research directions in South Africa
- Authors: Janion-Scheepers, Charlene , Measey, John , Braschler, Brigitte , Chown, Steven L , Coetzee, Louisee , Colville, Jonathan F , Dames, Joanna F , Davies, Andrew B , Davies, Sarah J , Davis, Adrian L V , Dippenaar-Schoeman, Ansi S , Duffy, Grant A , Fouries, Driekie , Griffiths, Charles , Haddad, Charles R , Hamer, Michelle , Herbert, David G , Hugo-Coetzee, Elizabeth A , Jacobs, Adriaanas , Jacobs, Karin , Jansen van Rensburg, Candice , Lamani, Siviwe , Lotz, Leon N , vdm Louw, Schalk , Lyle, Robin , Malan, Antoinette P , Marais, Mariette , Neethling, Jan-Andries , Nxele, Thembeka , Plisko, Danuta J , Prendini, Lorenzo , Rink, Ariella N , Swart, Antionette , Theron, Pieter , Truter, Mariette , Ueckermnn, Eddie , Uys, Vivienne M , Villet, Martin H , Willows-Munro, Sandy , Wilson, R U
- Date: 2016
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/448682 , vital:74751 , https://doi.org/10.1016/j.pedobi.2016.03.004
- Description: Soils are integral to agricultural productivity, biodiversity, and the maintenance of ecosystem services. However, soil ecosystem research depends on foundational biological knowledge that is often missing. In this review, we present a comprehensive, cross-taxa overview of the soil biota of South Africa. We discuss the literature and sampling methods used to assess soil biota, the available taxonomic expertise and main collections within South Africa, the availability of identification guides and online resources, and the status and distribution of described species. We include species lists for all South African soil biota and, for groups with sufficient distribution records, species richness maps. Despite South Africa being only 0.8% of the earth’s terrestrial area, it contains nearly 1.8% of the world’s described soil species (mean per taxon 3.64%, range 0.17–15%; n = 36 groups), with nematodes and earthworms showing a remarkable (6.4 and 7.7%) proportion of globally described diversity. Endemism is high for most groups, ranging from 33–92%. However, major knowledge gaps exist for most soil biota groups. While sampling has been relatively comprehensive in some areas for a few groups (particularly those with direct socioeconomic impacts), the Nama-Karoo, Northern Cape and Eastern Cape are poorly sampled. Natural soils in biodiversity hotspots, such as the Fynbos Biome, are also understudied. We argue that a more integrative approach to acquiring foundational knowledge in soil biodiversity is needed if applied soil research is to be effective in ensuring sustainable soil health. Considerable investment will be required to bring our understanding of the soil biodiversity in this megadiverse region to a level where the Millennium Development Goals can be reached.
- Full Text:
- Date Issued: 2016
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