Differential motif enrichment analysis of paired ChIP-seq experiments

Title: Differential motif enrichment analysis of paired ChIP-seq experiments
Creator: Lesluyes, Tom
Creator: Johnson, James
Creator: Machanick, Philip
Creator: Bailey, Timothy L
Subject: To be catalogued
Date Issued: 2014
Date: 2014
Type: text
Type: article
Identifier: http://hdl.handle.net/10962/439250
Identifier: vital:73559
Identifier: https://doi.org/10.1186/1471-2164-15-752
Description: Motif enrichment analysis of transcription factor ChIP-seq data can help identify transcription factors that cooperate or compete. Previously, little attention has been given to comparative motif enrichment analysis of pairs of ChIP-seq experiments, where the binding of the same transcription factor is assayed under different conditions. Such comparative analysis could potentially identify the distinct regulatory partners/competitors of the assayed transcription factor under different conditions or at different stages of development.
Format: 13 pages
Format: pdf
Language: English
Relation: Springer
Relation: Lesluyes, T., Johnson, J., Machanick, P. and Bailey, T.L., 2014. Differential motif enrichment analysis of paired ChIP-seq experiments. BMC genomics, 15, pp.1-13
Relation: Springer volume 15 number 1 1 13 2014 document
Rights: Publisher
Rights: Use of this resource is governed by the terms and conditions of the SpringerLink Terms of Use Statement ( https://link.springer.com/termsandconditions)

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Machanick, Philip (Assoc Prof)

RU Department of Computer Science

SDG 09. Industry, Innovation and Infrastructure

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