Understanding resource use of an invasive species: Diet of the common warthog in Eastern Cape succulent thicket
- Mgqatsa, Nokubonga, Jama, Kanyisa, Landman, Marietjie, Kerley, Graham I H
- Authors: Mgqatsa, Nokubonga , Jama, Kanyisa , Landman, Marietjie , Kerley, Graham I H
- Date: 2024
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/462746 , vital:76331 , xlink:href="https://doi.org/10.1016/j.jaridenv.2024.105155"
- Description: Understanding resource use of invasive species provides insights for predicting and mitigating their impacts on biodiversity. We explored the predictability of diet of the invasive common warthog by describing and comparing the diet of warthog populations from two semi-arid, invaded sites, Addo Elephant National Park (AMC), and Great Fish River Nature Reserve (GFRNR), Eastern Cape, South Africa. These sites are both dominated by the Subtropical Thicket biome, but differ in vegetation type. We used forage availability to estimate diet preferences at AMC. We predicted that warthog would consume grass in invaded landscapes. Additionally, we predicted that the diet at one invaded site would predict this at another invaded site. As predicted, warthog mainly consumed grass at both sites (AMC – 87.4%, GFRNR – 88.5%), eating few woody plants, succulents, and forbs. Cynodon dactylon was the most consumed species in AMC, in GFRNR this was Eragrostis curvula and Cymbopogon pospichilii. Our ability to predict the diet between sites was constrained by variation in the plant species consumed. We found strong relationships between the consumption of preferred plant species at AMC and their consumption at GFRNR. We show that warthogs are specialised grazers outside their native range and thus can be expected to impact grass communities in invaded areas, especially preferred grass species. Thus, conservation managers need to monitor grasses in areas invaded by warthog to better detect and manage their impacts.
- Full Text:
- Date Issued: 2024
- Authors: Mgqatsa, Nokubonga , Jama, Kanyisa , Landman, Marietjie , Kerley, Graham I H
- Date: 2024
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/462746 , vital:76331 , xlink:href="https://doi.org/10.1016/j.jaridenv.2024.105155"
- Description: Understanding resource use of invasive species provides insights for predicting and mitigating their impacts on biodiversity. We explored the predictability of diet of the invasive common warthog by describing and comparing the diet of warthog populations from two semi-arid, invaded sites, Addo Elephant National Park (AMC), and Great Fish River Nature Reserve (GFRNR), Eastern Cape, South Africa. These sites are both dominated by the Subtropical Thicket biome, but differ in vegetation type. We used forage availability to estimate diet preferences at AMC. We predicted that warthog would consume grass in invaded landscapes. Additionally, we predicted that the diet at one invaded site would predict this at another invaded site. As predicted, warthog mainly consumed grass at both sites (AMC – 87.4%, GFRNR – 88.5%), eating few woody plants, succulents, and forbs. Cynodon dactylon was the most consumed species in AMC, in GFRNR this was Eragrostis curvula and Cymbopogon pospichilii. Our ability to predict the diet between sites was constrained by variation in the plant species consumed. We found strong relationships between the consumption of preferred plant species at AMC and their consumption at GFRNR. We show that warthogs are specialised grazers outside their native range and thus can be expected to impact grass communities in invaded areas, especially preferred grass species. Thus, conservation managers need to monitor grasses in areas invaded by warthog to better detect and manage their impacts.
- Full Text:
- Date Issued: 2024
Using photo by-catch data to reliably estimate spotted hyaena densities over time
- Mgqatsa, Nokubonga, Jama, Kanyisa, Landman, Marietjie, Kerley, Graham I H
- Authors: Mgqatsa, Nokubonga , Jama, Kanyisa , Landman, Marietjie , Kerley, Graham I H
- Date: 2024
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/462757 , vital:76332 , xlink:href="https://doi.org/10.1016/j.jaridenv.2024.105155"
- Description: Protected areas are becoming increasingly isolated refugia for large carnivores but remain critical for their survival. Spotted hyaenas (Crocuta crocuta) are important members of the African large carnivore guild but, like other members of the guild, routinely come into conflict with people because of their large home ranges that are not always confined to protected areas. To effectively conserve spotted hyaena populations, it is paramount to monitor their abundance through reliable and cost-effective techniques. We estimated the density of spotted hyaenas in Hluhluwe–iMfolozi Park (HiP), South Africa using camera trap images and a spatially explicit capture-recapture (SECR) framework between 2013 and 2018. We estimated an average of 18.29 ± 3.27 spotted hyaenas per 100 km2 between 2013 and 2018, with an annual estimated high of 20.83/100 km2 in 2014 and a low of 11.98/100 km2 in 2015. Our results demonstrate that camera trap by-catch data can be used for estimating spotted hyaena densities over time. We believe that given the widespread use and deployment of camera traps across Africa, collaborative efforts to use existing data to improve regional and continental estimates and population trends for spotted hyaenas should be a priority.
- Full Text:
- Date Issued: 2024
- Authors: Mgqatsa, Nokubonga , Jama, Kanyisa , Landman, Marietjie , Kerley, Graham I H
- Date: 2024
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/462757 , vital:76332 , xlink:href="https://doi.org/10.1016/j.jaridenv.2024.105155"
- Description: Protected areas are becoming increasingly isolated refugia for large carnivores but remain critical for their survival. Spotted hyaenas (Crocuta crocuta) are important members of the African large carnivore guild but, like other members of the guild, routinely come into conflict with people because of their large home ranges that are not always confined to protected areas. To effectively conserve spotted hyaena populations, it is paramount to monitor their abundance through reliable and cost-effective techniques. We estimated the density of spotted hyaenas in Hluhluwe–iMfolozi Park (HiP), South Africa using camera trap images and a spatially explicit capture-recapture (SECR) framework between 2013 and 2018. We estimated an average of 18.29 ± 3.27 spotted hyaenas per 100 km2 between 2013 and 2018, with an annual estimated high of 20.83/100 km2 in 2014 and a low of 11.98/100 km2 in 2015. Our results demonstrate that camera trap by-catch data can be used for estimating spotted hyaena densities over time. We believe that given the widespread use and deployment of camera traps across Africa, collaborative efforts to use existing data to improve regional and continental estimates and population trends for spotted hyaenas should be a priority.
- Full Text:
- Date Issued: 2024
Agent-Based Modeling and Simulation for Transmission Dynamics and Surveillance of Dengue: Conceptual and Design Model
- Pascoe, Luba, Nyambo, Devotha G, Bradshaw, Karen L, Clemen, Thomas
- Authors: Pascoe, Luba , Nyambo, Devotha G , Bradshaw, Karen L , Clemen, Thomas
- Date: 2023
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/440200 , vital:73756 , xlink:href="https://doi.org/10.1109/AFRICON55910.2023.10293299"
- Description: African countries need to strengthen surveillance and control of arboviral diseases such as dengue due to increased outbreaks and spread of arboviruses. Climatic, socio-environment, and ecological variables influence the spread of dengue fever in Sub-Saharan Africa. This paper presents an Agent-Based conceptual and design model for dengue fever developed using the Multi-Agent Research and Simulation (MARS) framework. The study analyzes dengue fever's spatial distribution and identifies the causal relationship between the disease and its climatic and environmental variables. Agent-based modeling (ABM) was used to comprehend the spatial patterns of variation to determine the ecological association between the observed spatio-temporal variations in dengue fever. The domain and design model of an ABM for the surveillance of dengue fever is presented based on the Overview, Design Concepts, and Details (ODD) protocol. Model input parameters and input data for the study area are also presented. The dengue ABM can be adopted and reused for modeling other diseases and other complex problems from different domains while ensuring that their unique characteristics and appropriate modifications are considered to ensure the model's validity and relevance to the new context.
- Full Text:
- Date Issued: 2023
- Authors: Pascoe, Luba , Nyambo, Devotha G , Bradshaw, Karen L , Clemen, Thomas
- Date: 2023
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/440200 , vital:73756 , xlink:href="https://doi.org/10.1109/AFRICON55910.2023.10293299"
- Description: African countries need to strengthen surveillance and control of arboviral diseases such as dengue due to increased outbreaks and spread of arboviruses. Climatic, socio-environment, and ecological variables influence the spread of dengue fever in Sub-Saharan Africa. This paper presents an Agent-Based conceptual and design model for dengue fever developed using the Multi-Agent Research and Simulation (MARS) framework. The study analyzes dengue fever's spatial distribution and identifies the causal relationship between the disease and its climatic and environmental variables. Agent-based modeling (ABM) was used to comprehend the spatial patterns of variation to determine the ecological association between the observed spatio-temporal variations in dengue fever. The domain and design model of an ABM for the surveillance of dengue fever is presented based on the Overview, Design Concepts, and Details (ODD) protocol. Model input parameters and input data for the study area are also presented. The dengue ABM can be adopted and reused for modeling other diseases and other complex problems from different domains while ensuring that their unique characteristics and appropriate modifications are considered to ensure the model's validity and relevance to the new context.
- Full Text:
- Date Issued: 2023
Enabling Vehicle Search Through Robust Licence Plate Detection
- Boby, Alden, Brown, Dane L, Connan, James, Marais, Marc, Kuhlane, Luxolo L
- Authors: Boby, Alden , Brown, Dane L , Connan, James , Marais, Marc , Kuhlane, Luxolo L
- Date: 2023
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/463372 , vital:76403 , xlink:href="https://ieeexplore.ieee.org/abstract/document/10220508"
- Description: Licence plate recognition has many practical applications for security and surveillance. This paper presents a robust licence plate detection system that uses string-matching algorithms to identify a vehicle in data. Object detection models have had limited application in the character recognition domain. The system utilises the YOLO object detection model to perform character recognition to ensure more accurate character predictions. The model incorporates super-resolution techniques to enhance the quality of licence plate images to increase character recognition accuracy. The proposed system can accurately detect license plates in diverse conditions and can handle license plates with varying fonts and backgrounds. The system's effectiveness is demonstrated through experimentation on components of the system, showing promising license plate detection and character recognition accuracy. The overall system works with all the components to track vehicles by matching a target string with detected licence plates in a scene. The system has potential applications in law enforcement, traffic management, and parking systems and can significantly advance surveillance and security through automation.
- Full Text:
- Date Issued: 2023
- Authors: Boby, Alden , Brown, Dane L , Connan, James , Marais, Marc , Kuhlane, Luxolo L
- Date: 2023
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/463372 , vital:76403 , xlink:href="https://ieeexplore.ieee.org/abstract/document/10220508"
- Description: Licence plate recognition has many practical applications for security and surveillance. This paper presents a robust licence plate detection system that uses string-matching algorithms to identify a vehicle in data. Object detection models have had limited application in the character recognition domain. The system utilises the YOLO object detection model to perform character recognition to ensure more accurate character predictions. The model incorporates super-resolution techniques to enhance the quality of licence plate images to increase character recognition accuracy. The proposed system can accurately detect license plates in diverse conditions and can handle license plates with varying fonts and backgrounds. The system's effectiveness is demonstrated through experimentation on components of the system, showing promising license plate detection and character recognition accuracy. The overall system works with all the components to track vehicles by matching a target string with detected licence plates in a scene. The system has potential applications in law enforcement, traffic management, and parking systems and can significantly advance surveillance and security through automation.
- Full Text:
- Date Issued: 2023
Deep Learning Approach to Image Deblurring and Image Super-Resolution using DeblurGAN and SRGAN
- Kuhlane, Luxolo L, Brown, Dane L, Connan, James, Boby, Alden, Marais, Marc
- Authors: Kuhlane, Luxolo L , Brown, Dane L , Connan, James , Boby, Alden , Marais, Marc
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/465157 , vital:76578 , xlink:href="https://www.researchgate.net/profile/Luxolo-Kuhlane/publication/363257796_Deep_Learning_Approach_to_Image_Deblurring_and_Image_Super-Resolution_using_DeblurGAN_and_SRGAN/links/6313b5a01ddd44702131b3df/Deep-Learning-Approach-to-Image-Deblurring-and-Image-Super-Resolution-using-DeblurGAN-and-SRGAN.pdf"
- Description: Deblurring is the task of restoring a blurred image to a sharp one, retrieving the information lost due to the blur of an image. Image deblurring and super-resolution, as representative image restoration problems, have been studied for a decade. Due to their wide range of applications, numerous techniques have been proposed to tackle these problems, inspiring innovations for better performance. Deep learning has become a robust framework for many image processing tasks, including restoration. In particular, generative adversarial networks (GANs), proposed by [1], have demonstrated remarkable performances in generating plausible images. However, training GANs for image restoration is a non-trivial task. This research investigates optimization schemes for GANs that improve image quality by providing meaningful training objective functions. In this paper we use a DeblurGAN and Super-Resolution Generative Adversarial Network (SRGAN) on the chosen dataset.
- Full Text:
- Date Issued: 2022
- Authors: Kuhlane, Luxolo L , Brown, Dane L , Connan, James , Boby, Alden , Marais, Marc
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/465157 , vital:76578 , xlink:href="https://www.researchgate.net/profile/Luxolo-Kuhlane/publication/363257796_Deep_Learning_Approach_to_Image_Deblurring_and_Image_Super-Resolution_using_DeblurGAN_and_SRGAN/links/6313b5a01ddd44702131b3df/Deep-Learning-Approach-to-Image-Deblurring-and-Image-Super-Resolution-using-DeblurGAN-and-SRGAN.pdf"
- Description: Deblurring is the task of restoring a blurred image to a sharp one, retrieving the information lost due to the blur of an image. Image deblurring and super-resolution, as representative image restoration problems, have been studied for a decade. Due to their wide range of applications, numerous techniques have been proposed to tackle these problems, inspiring innovations for better performance. Deep learning has become a robust framework for many image processing tasks, including restoration. In particular, generative adversarial networks (GANs), proposed by [1], have demonstrated remarkable performances in generating plausible images. However, training GANs for image restoration is a non-trivial task. This research investigates optimization schemes for GANs that improve image quality by providing meaningful training objective functions. In this paper we use a DeblurGAN and Super-Resolution Generative Adversarial Network (SRGAN) on the chosen dataset.
- Full Text:
- Date Issued: 2022
Integrating child rights standards in contraceptive and abortion care for minors in Africa
- Kangaude, Godfrey D, Macleod, Catriona I, Coast, Ernestina, Fetters, Tamara
- Authors: Kangaude, Godfrey D , Macleod, Catriona I , Coast, Ernestina , Fetters, Tamara
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/441242 , vital:73869 , xlink:href="https://doi.org/10.1002/ijgo.14502"
- Description: Minor girls in Africa face challenges in accessing high-quality contraceptive and abortion services because laws and policies are not child-friendly. Many countries maintain restrictive laws, policies, or hospital practices that make it difficult for minors to access contraception and safe abortion even when the pregnancy would risk their life or health. Further, the clinical guidelines on contraceptive and abortion care are silent, vague, or ambiguous regarding minors' consent. African states should remedy the situation by ensuring that clinical guidelines integrate child rights principles and standards articulated in child rights treaties to enable health providers to facilitate full, unencumbered access to contraceptive and abortion care for minor girls. A sample of clinical guidelines is analyzed to demonstrate the importance of explicit, consistent, and unambiguous language about children's consent to ensure that healthcare workers provide sexual and reproductive health care in a manner that respects child rights.
- Full Text:
- Date Issued: 2022
- Authors: Kangaude, Godfrey D , Macleod, Catriona I , Coast, Ernestina , Fetters, Tamara
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/441242 , vital:73869 , xlink:href="https://doi.org/10.1002/ijgo.14502"
- Description: Minor girls in Africa face challenges in accessing high-quality contraceptive and abortion services because laws and policies are not child-friendly. Many countries maintain restrictive laws, policies, or hospital practices that make it difficult for minors to access contraception and safe abortion even when the pregnancy would risk their life or health. Further, the clinical guidelines on contraceptive and abortion care are silent, vague, or ambiguous regarding minors' consent. African states should remedy the situation by ensuring that clinical guidelines integrate child rights principles and standards articulated in child rights treaties to enable health providers to facilitate full, unencumbered access to contraceptive and abortion care for minor girls. A sample of clinical guidelines is analyzed to demonstrate the importance of explicit, consistent, and unambiguous language about children's consent to ensure that healthcare workers provide sexual and reproductive health care in a manner that respects child rights.
- Full Text:
- Date Issued: 2022
Investigating signer-independent sign language recognition on the lsa64 dataset
- Marais, Marc, Brown, Dane L, Connan, James, Boby, Alden, Kuhlane, Luxolo L
- Authors: Marais, Marc , Brown, Dane L , Connan, James , Boby, Alden , Kuhlane, Luxolo L
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/465179 , vital:76580 , xlink:href="https://www.researchgate.net/profile/Marc-Marais/publication/363174384_Investigating_Signer-Independ-ent_Sign_Language_Recognition_on_the_LSA64_Dataset/links/63108c7d5eed5e4bd138680f/Investigating-Signer-Independent-Sign-Language-Recognition-on-the-LSA64-Dataset.pdf"
- Description: Conversing with hearing disabled people is a significant challenge; however, computer vision advancements have significantly improved this through automated sign language recognition. One of the common issues in sign language recognition is signer-dependence, where variations arise from varying signers, who gesticulate naturally. Utilising the LSA64 dataset, a small scale Argentinian isolated sign language recognition, we investigate signer-independent sign language recognition. An InceptionV3-GRU architecture is employed to extract and classify spatial and temporal information for automated sign language recognition. The signer-dependent approach yielded an accuracy of 97.03%, whereas the signer-independent approach achieved an accuracy of 74.22%. The signer-independent system shows promise towards addressing the real-world and common issue of signer-dependence in sign language recognition.
- Full Text:
- Date Issued: 2022
- Authors: Marais, Marc , Brown, Dane L , Connan, James , Boby, Alden , Kuhlane, Luxolo L
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/465179 , vital:76580 , xlink:href="https://www.researchgate.net/profile/Marc-Marais/publication/363174384_Investigating_Signer-Independ-ent_Sign_Language_Recognition_on_the_LSA64_Dataset/links/63108c7d5eed5e4bd138680f/Investigating-Signer-Independent-Sign-Language-Recognition-on-the-LSA64-Dataset.pdf"
- Description: Conversing with hearing disabled people is a significant challenge; however, computer vision advancements have significantly improved this through automated sign language recognition. One of the common issues in sign language recognition is signer-dependence, where variations arise from varying signers, who gesticulate naturally. Utilising the LSA64 dataset, a small scale Argentinian isolated sign language recognition, we investigate signer-independent sign language recognition. An InceptionV3-GRU architecture is employed to extract and classify spatial and temporal information for automated sign language recognition. The signer-dependent approach yielded an accuracy of 97.03%, whereas the signer-independent approach achieved an accuracy of 74.22%. The signer-independent system shows promise towards addressing the real-world and common issue of signer-dependence in sign language recognition.
- Full Text:
- Date Issued: 2022
Reproductive health systems analyses and the reparative reproductive justice approach: a case study of unsafe abortion in Lesotho
- Macleod, Catriona I, Reynolds, John H
- Authors: Macleod, Catriona I , Reynolds, John H
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/441288 , vital:73874 , xlink:href="https://doi.org/10.1080/17441692.2021.1887317"
- Description: Health systems analyses are touted as mechanisms through which health policy and planning may be implemented. An example is the WHO health systems approach that connects people (needs, rights, perspectives) with services and technologies (equitable access, quality of care, mix of interventions) and with policies and institutional capacities (laws, regulations, human/physical resources, management and financing). The approach is comprehensive and multi-faceted, which is a strength. We argue, however, that health systems analyses should be supplemented with a focus on reproductive justice. Using the WHO health systems approach as an exemplar, we show how the reparative reproductive justice approach outlined by the first author and colleagues assists with outlining comprehensive remedies to the inequities identified in the systems analysis. We argue for attention to remedies at individual and collective, material and symbolic levels. We illustrate our argument using unsafe abortion, legal abortion services and post-abortion care in Lesotho as a case study. We outline the policies, services and people components of abortion in Lesotho using the WHO systems model, followed by a reparative justice analysis of remedies.
- Full Text:
- Date Issued: 2022
- Authors: Macleod, Catriona I , Reynolds, John H
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/441288 , vital:73874 , xlink:href="https://doi.org/10.1080/17441692.2021.1887317"
- Description: Health systems analyses are touted as mechanisms through which health policy and planning may be implemented. An example is the WHO health systems approach that connects people (needs, rights, perspectives) with services and technologies (equitable access, quality of care, mix of interventions) and with policies and institutional capacities (laws, regulations, human/physical resources, management and financing). The approach is comprehensive and multi-faceted, which is a strength. We argue, however, that health systems analyses should be supplemented with a focus on reproductive justice. Using the WHO health systems approach as an exemplar, we show how the reparative reproductive justice approach outlined by the first author and colleagues assists with outlining comprehensive remedies to the inequities identified in the systems analysis. We argue for attention to remedies at individual and collective, material and symbolic levels. We illustrate our argument using unsafe abortion, legal abortion services and post-abortion care in Lesotho as a case study. We outline the policies, services and people components of abortion in Lesotho using the WHO systems model, followed by a reparative justice analysis of remedies.
- Full Text:
- Date Issued: 2022
Synthesis of 2, 3-dihydroxy-3-(N-substituted carbamoyl) propylphosphonic acid derivatives as hybrid DOXP-fosmidomycin analogues
- Mutorwa, Marius K, Lobb, Kevin A, Klein, Rosalyn, Blatch, Gregory L, Kaye, Perry T
- Authors: Mutorwa, Marius K , Lobb, Kevin A , Klein, Rosalyn , Blatch, Gregory L , Kaye, Perry T
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/453212 , vital:75231 , xlink:href="https://doi.org/10.1016/j.molstruc.2022.132453"
- Description: A six-step synthetic pathway has been established to access a series of racemic 2,3-dihydroxy-3-(Nsubstituted carbamoyl)propylphosphonic acid derivatives, designed to contain structural features common to both the natural substrate 1-deoxy-D-xylulose 5-phosphate (DOXP) of the Plasmodium falciparum (Pf) DXR enzyme and its known inhibitor, fosmidomycin. Positive STD-NMR and in silico docking data obtained for some of the compounds indicate their capacity to bind to the analogous E.coli DXR enzyme.
- Full Text:
- Date Issued: 2022
- Authors: Mutorwa, Marius K , Lobb, Kevin A , Klein, Rosalyn , Blatch, Gregory L , Kaye, Perry T
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/453212 , vital:75231 , xlink:href="https://doi.org/10.1016/j.molstruc.2022.132453"
- Description: A six-step synthetic pathway has been established to access a series of racemic 2,3-dihydroxy-3-(Nsubstituted carbamoyl)propylphosphonic acid derivatives, designed to contain structural features common to both the natural substrate 1-deoxy-D-xylulose 5-phosphate (DOXP) of the Plasmodium falciparum (Pf) DXR enzyme and its known inhibitor, fosmidomycin. Positive STD-NMR and in silico docking data obtained for some of the compounds indicate their capacity to bind to the analogous E.coli DXR enzyme.
- Full Text:
- Date Issued: 2022
Adaptive network intrusion detection using optimised machine learning models
- Chindove, Hatitye E, Brown, Dane L
- Authors: Chindove, Hatitye E , Brown, Dane L
- Date: 2021
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/465634 , vital:76627 , xlink:href="https://www.researchgate.net/publication/358046953_Adaptive_Network_Intrusion_Detection_using_Optimised_Machine_Learning_Models"
- Description: Network intrusion detection system (NIDS) adoption is essential for mitigating computer network attacks in various scenarios. However, the increasing complexity of computer networks and attacks make it challenging to classify network traffic. Machine learning (ML) techniques in a NIDS can be affected by different scenarios, and thus the recency, size and applicability of datasets are vital factors to consider when selecting and tuning a machine learning classifier. The proposed approach evaluates relatively new datasets constructed such that they depict real-world scenarios. It includes empirical analyses of practical, systematic ML-based NIDS with significant network traffic for improved intrusion detection. A comparison between machine learning classifiers, including deep learning, form part of the evaluation process. Results on how the proposed approach increased model effectiveness for NIDS in a more practical setting are discussed. Recurrent neural networks and random forests models consistently achieved the best results.
- Full Text:
- Date Issued: 2021
- Authors: Chindove, Hatitye E , Brown, Dane L
- Date: 2021
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/465634 , vital:76627 , xlink:href="https://www.researchgate.net/publication/358046953_Adaptive_Network_Intrusion_Detection_using_Optimised_Machine_Learning_Models"
- Description: Network intrusion detection system (NIDS) adoption is essential for mitigating computer network attacks in various scenarios. However, the increasing complexity of computer networks and attacks make it challenging to classify network traffic. Machine learning (ML) techniques in a NIDS can be affected by different scenarios, and thus the recency, size and applicability of datasets are vital factors to consider when selecting and tuning a machine learning classifier. The proposed approach evaluates relatively new datasets constructed such that they depict real-world scenarios. It includes empirical analyses of practical, systematic ML-based NIDS with significant network traffic for improved intrusion detection. A comparison between machine learning classifiers, including deep learning, form part of the evaluation process. Results on how the proposed approach increased model effectiveness for NIDS in a more practical setting are discussed. Recurrent neural networks and random forests models consistently achieved the best results.
- Full Text:
- Date Issued: 2021
An Evaluation of YOLO-Based Algorithms for Hand Detection in the Kitchen
- Van Staden, Joshua, Brown, Dane L
- Authors: Van Staden, Joshua , Brown, Dane L
- Date: 2021
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/465134 , vital:76576 , xlink:href="https://ieeexplore.ieee.org/abstract/document/9519307"
- Description: Convolutional Neural Networks have offered an accurate method with which to run object detection on images. Specifically, the YOLO family of object detection algorithms have proven to be relatively fast and accurate. Since its inception, the different variants of this algorithm have been tested on different datasets. In this paper, we evaluate the performances of these algorithms on the recent Epic Kitchens-100 dataset. This dataset provides egocentric footage of people interacting with various objects in the kitchen. Most prominently shown in the footage is an egocentric view of the participants' hands. We aim to use the YOLOv3 algorithm to detect these hands within the footage provided in this dataset. In particular, we examine the YOLOv3 algorithm using two different backbones: MobileNet-lite and VGG16. We trained them on a mixture of samples from the Egohands and Epic Kitchens-100 datasets. In a separate experiment, average precision was measured on an unseen Epic Kitchens-100 subset. We found that the models are relatively simple and lead to lower scores on the Epic Kitchens 100 dataset. This is attributed to the high background noise on the Epic Kitchens 100 dataset. Nonetheless, the VGG16 architecture was found to have a higher Average Precision (AP) and is, therefore, more suited for retrospective analysis. None of the models was suitable for real-time analysis due to complex egocentric data.
- Full Text:
- Date Issued: 2021
- Authors: Van Staden, Joshua , Brown, Dane L
- Date: 2021
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/465134 , vital:76576 , xlink:href="https://ieeexplore.ieee.org/abstract/document/9519307"
- Description: Convolutional Neural Networks have offered an accurate method with which to run object detection on images. Specifically, the YOLO family of object detection algorithms have proven to be relatively fast and accurate. Since its inception, the different variants of this algorithm have been tested on different datasets. In this paper, we evaluate the performances of these algorithms on the recent Epic Kitchens-100 dataset. This dataset provides egocentric footage of people interacting with various objects in the kitchen. Most prominently shown in the footage is an egocentric view of the participants' hands. We aim to use the YOLOv3 algorithm to detect these hands within the footage provided in this dataset. In particular, we examine the YOLOv3 algorithm using two different backbones: MobileNet-lite and VGG16. We trained them on a mixture of samples from the Egohands and Epic Kitchens-100 datasets. In a separate experiment, average precision was measured on an unseen Epic Kitchens-100 subset. We found that the models are relatively simple and lead to lower scores on the Epic Kitchens 100 dataset. This is attributed to the high background noise on the Epic Kitchens 100 dataset. Nonetheless, the VGG16 architecture was found to have a higher Average Precision (AP) and is, therefore, more suited for retrospective analysis. None of the models was suitable for real-time analysis due to complex egocentric data.
- Full Text:
- Date Issued: 2021
Mildly elevated thyroid-stimulating hormone is associated with endothelial dysfunction and severe preeclampsia among pregnant women with insufficient iodine intake in Eastern Cape province, South Africa
- Businge, Charles Bitamazire, Longo-Mbenza, Benjamin, Kengne, Andre Pascal
- Authors: Businge, Charles Bitamazire , Longo-Mbenza, Benjamin , Kengne, Andre Pascal
- Date: 2021
- Subjects: Preeclampsia Iodine deficiency diseases Endothelial cells Article
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/11260/6908 , vital:52565 , xlink:href="https://10.1080/07853890.2021.1947520"
- Description: Background Preeclampsia and hypothyroidism are associated with endothelial dysfunction. Iodine deficiency is a risk factor for subclinical hypothyroidism in pregnancy. However, there is a paucity of data on the relationship between iodine nutrition state in pregnancy, the degree of endothelial dysfunction, and the risk of preeclampsia. Methods Ninety-five normotensive pregnant women, 50 women with preeclampsia with no severe features, and 50 women with severe preeclampsia were enrolled into the current study from the maternity units of Nelson Mandela Academic Hospital and Mthatha Regional Hospitals in Eastern Cape Province, South Africa. Urinary iodine concentration (UIC), serum markers of thyroid function, aortic augmentation index, and pulse wave velocity (PWV) were compared. Results Median UIC was 167.5, 127.7, and 88.5 µg/L, respectively for normotensive pregnant women, those with preeclampsia and severe preeclampsia (p = .150). Participants with severe preeclampsia had significantly higher median thyroid-stimulating hormone (TSH) and oxidized LDL than normotensive and preeclamptic women without severe features (respectively 3.0, 2.3, and 2.3 IU/L; 1.2, 1.0, and 1.0 IU/L, p less .05). The median Aortic augmentation index was 7.5, 19.0, and 21.0 (p less .001), and the pulse wave velocity 5.1, 5.7, and 6.3, respectively for normotensive, preeclampsia, and severe preeclampsia participants (both p less .001). In linear regressions, TSH, age, and hypertensive disease were independent predictors of elevated PWV. Conclusion Upper normal-range TSH levels in women with severe preeclampsia were associated with markers of endothelial dysfunction. The low UIC and trend towards the elevation of thyroglobulin suggest that inadequate iodine intake may have increased TSH levels and indirectly caused endothelial dysfunction. Keywords: Preeclampsia, Iodine deficiency, Elevated thyroid-stimulating hormone, Pulse wave velocity, Endothelial dysfunction
- Full Text:
- Date Issued: 2021
- Authors: Businge, Charles Bitamazire , Longo-Mbenza, Benjamin , Kengne, Andre Pascal
- Date: 2021
- Subjects: Preeclampsia Iodine deficiency diseases Endothelial cells Article
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/11260/6908 , vital:52565 , xlink:href="https://10.1080/07853890.2021.1947520"
- Description: Background Preeclampsia and hypothyroidism are associated with endothelial dysfunction. Iodine deficiency is a risk factor for subclinical hypothyroidism in pregnancy. However, there is a paucity of data on the relationship between iodine nutrition state in pregnancy, the degree of endothelial dysfunction, and the risk of preeclampsia. Methods Ninety-five normotensive pregnant women, 50 women with preeclampsia with no severe features, and 50 women with severe preeclampsia were enrolled into the current study from the maternity units of Nelson Mandela Academic Hospital and Mthatha Regional Hospitals in Eastern Cape Province, South Africa. Urinary iodine concentration (UIC), serum markers of thyroid function, aortic augmentation index, and pulse wave velocity (PWV) were compared. Results Median UIC was 167.5, 127.7, and 88.5 µg/L, respectively for normotensive pregnant women, those with preeclampsia and severe preeclampsia (p = .150). Participants with severe preeclampsia had significantly higher median thyroid-stimulating hormone (TSH) and oxidized LDL than normotensive and preeclamptic women without severe features (respectively 3.0, 2.3, and 2.3 IU/L; 1.2, 1.0, and 1.0 IU/L, p less .05). The median Aortic augmentation index was 7.5, 19.0, and 21.0 (p less .001), and the pulse wave velocity 5.1, 5.7, and 6.3, respectively for normotensive, preeclampsia, and severe preeclampsia participants (both p less .001). In linear regressions, TSH, age, and hypertensive disease were independent predictors of elevated PWV. Conclusion Upper normal-range TSH levels in women with severe preeclampsia were associated with markers of endothelial dysfunction. The low UIC and trend towards the elevation of thyroglobulin suggest that inadequate iodine intake may have increased TSH levels and indirectly caused endothelial dysfunction. Keywords: Preeclampsia, Iodine deficiency, Elevated thyroid-stimulating hormone, Pulse wave velocity, Endothelial dysfunction
- Full Text:
- Date Issued: 2021
Photocytotoxicity of heavy-atom-free thiobarbituric acid functionalized pyrene derivatives against MCF-7 cancer cells
- Babu, Balaji, Ali, Thaslima A, Ochappan, Thivagar, Mack, John, Nyokong, Tebello, Sethuraman, Mathur G
- Authors: Babu, Balaji , Ali, Thaslima A , Ochappan, Thivagar , Mack, John , Nyokong, Tebello , Sethuraman, Mathur G
- Date: 2021
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/190556 , vital:45005 , xlink:href="https://doi.org/10.1016/j.pdpdt.2020.102102"
- Description: Two thiobarbituric acid-functionalized pyrene derivatives (P1, P2) have been synthesized to explore the photophysical properties and photodynamic activity of dyes of this type. Both compounds exhibit an intense intramolecular charge transfer (ICT) band at ca. 470 nm, which is absent in the spectra of the precursor. P1 and P2 exhibit singlet oxygen generation on irradiation with light with moderate singlet oxygen yields of 0.36 and 0.32, respectively, in DMSO. P1 showed better photodynamic activity against MCF-7 cells with an IC50 value of 18.3 μM under illumination at 455 nm for 60 min with a Thorlabs M455L3 LED (330 mW.cm−2).
- Full Text:
- Date Issued: 2021
- Authors: Babu, Balaji , Ali, Thaslima A , Ochappan, Thivagar , Mack, John , Nyokong, Tebello , Sethuraman, Mathur G
- Date: 2021
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/190556 , vital:45005 , xlink:href="https://doi.org/10.1016/j.pdpdt.2020.102102"
- Description: Two thiobarbituric acid-functionalized pyrene derivatives (P1, P2) have been synthesized to explore the photophysical properties and photodynamic activity of dyes of this type. Both compounds exhibit an intense intramolecular charge transfer (ICT) band at ca. 470 nm, which is absent in the spectra of the precursor. P1 and P2 exhibit singlet oxygen generation on irradiation with light with moderate singlet oxygen yields of 0.36 and 0.32, respectively, in DMSO. P1 showed better photodynamic activity against MCF-7 cells with an IC50 value of 18.3 μM under illumination at 455 nm for 60 min with a Thorlabs M455L3 LED (330 mW.cm−2).
- Full Text:
- Date Issued: 2021
Photodynamic activity of Sn (IV) tetrathien-2-ylchlorin against MCF-7 breast cancer cells
- Babu, Balaji, Mack, John, Nyokong, Tebello
- Authors: Babu, Balaji , Mack, John , Nyokong, Tebello
- Date: 2021
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/185920 , vital:44448 , xlink:href="https://doi.org/10.1039/d0dt03958f"
- Description: A new readily-synthesized Sn(IV) tetraarylchlorin with thien-2-yl substituents (SnC) has been prepared and fully characterized by various spectroscopic techniques and its photophysical and photochemical properties, such as the singlet oxygen quantum yield (ΦΔ), fluorescence quantum yield (ΦF), triplet lifetime (τT) and photostability, have been evaluated. SnC has an unusually high ΦΔ value of 0.89 in DMF. Studies on the photodynamic activity against MCF-7 breast cancer cells exhibited a very low IC50 value of 0.9 μM and high phototoxicity (dark versus light) indices of >27.8 after irradiation with a 660 nm Thorlabs LED (280 mW cm−2). The results demonstrate that Sn(IV) tetraarylchlorins of this type are suitable candidates for further in-depth PDT studies.
- Full Text:
- Date Issued: 2021
- Authors: Babu, Balaji , Mack, John , Nyokong, Tebello
- Date: 2021
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/185920 , vital:44448 , xlink:href="https://doi.org/10.1039/d0dt03958f"
- Description: A new readily-synthesized Sn(IV) tetraarylchlorin with thien-2-yl substituents (SnC) has been prepared and fully characterized by various spectroscopic techniques and its photophysical and photochemical properties, such as the singlet oxygen quantum yield (ΦΔ), fluorescence quantum yield (ΦF), triplet lifetime (τT) and photostability, have been evaluated. SnC has an unusually high ΦΔ value of 0.89 in DMF. Studies on the photodynamic activity against MCF-7 breast cancer cells exhibited a very low IC50 value of 0.9 μM and high phototoxicity (dark versus light) indices of >27.8 after irradiation with a 660 nm Thorlabs LED (280 mW cm−2). The results demonstrate that Sn(IV) tetraarylchlorins of this type are suitable candidates for further in-depth PDT studies.
- Full Text:
- Date Issued: 2021
The distribution of selected woody invasive alien species in small towns in the Eastern Cape, South Africa
- Mabusela, A, Shackleton, Charlie M, Gewdla, Nanamhla
- Authors: Mabusela, A , Shackleton, Charlie M , Gewdla, Nanamhla
- Date: 2021
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/401289 , vital:69723 , xlink:href="https://doi.org/10.1016/j.sajb.2021.05.019"
- Description: The potential and real negative and positive effects of invasive alien species (IAS) are increasingly recognised by researchers, land managers and decision-makers. However, most of the research and knowledge stems from understandings developed from rural and natural landscapes, with relatively little derived from studies in urban settings. Small towns in particular pose a novel suite of conditions that make the study and mangment of IAS particularly pressing. Here we examined the distribution of seven woody IAS (Acacia mearnsii, Cestrum laevigatum, Eucalyptus spp., Lantana camara, Melia azedarach, Senna didymobotrya and Solanaum mauritianum) within and between five small towns in the Eastern Cape via means of drive-by road surveys of every street in each town. Across the five towns and seven IAS 4,307 individuals were recorded, with the highest densities found in the two more coastal towns. Almost two-thirds (63%) of the IAS were located in residential properties, 24 % in public spaces and 13 % on road verges, closely mirroring the proportional area of these landuses. Within the residential landuse zone specifically, the townships had between 41 % and 61 % of all the recorded IAS plants per town, followed by the affluent neighbourhoods (22 – 41 %) and lastly, the RDP neighbourhoods (6 – 32 %). Cestrum laevigatum was the most abundant woody IAS across the five towns as a whole (1,783 inviduals). The second-most abundant species was M. azedarach (914 stems) and the least recorded was S. mauritianum (44). Additionally, there were differences in the general distribution of the seven species across residential neighbourhoods, with C. laevigatum (71.2 %), M. azedarach (49.3 %) and S. mauritianum (60.0 %) concentrated in township neighbourhoods, whilst A. mearnsii (66.4 %), L. camara (64.1 %) and Eucalyptus spp. (48.6 %) were most common in the affluent neighbourhoods. This study confirms that woody IAS are widespread in small towns of the region, but that they are unevenly distributed between towns and landuses within towns, indicating the need for local-scale inventories and management.
- Full Text:
- Date Issued: 2021
- Authors: Mabusela, A , Shackleton, Charlie M , Gewdla, Nanamhla
- Date: 2021
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/401289 , vital:69723 , xlink:href="https://doi.org/10.1016/j.sajb.2021.05.019"
- Description: The potential and real negative and positive effects of invasive alien species (IAS) are increasingly recognised by researchers, land managers and decision-makers. However, most of the research and knowledge stems from understandings developed from rural and natural landscapes, with relatively little derived from studies in urban settings. Small towns in particular pose a novel suite of conditions that make the study and mangment of IAS particularly pressing. Here we examined the distribution of seven woody IAS (Acacia mearnsii, Cestrum laevigatum, Eucalyptus spp., Lantana camara, Melia azedarach, Senna didymobotrya and Solanaum mauritianum) within and between five small towns in the Eastern Cape via means of drive-by road surveys of every street in each town. Across the five towns and seven IAS 4,307 individuals were recorded, with the highest densities found in the two more coastal towns. Almost two-thirds (63%) of the IAS were located in residential properties, 24 % in public spaces and 13 % on road verges, closely mirroring the proportional area of these landuses. Within the residential landuse zone specifically, the townships had between 41 % and 61 % of all the recorded IAS plants per town, followed by the affluent neighbourhoods (22 – 41 %) and lastly, the RDP neighbourhoods (6 – 32 %). Cestrum laevigatum was the most abundant woody IAS across the five towns as a whole (1,783 inviduals). The second-most abundant species was M. azedarach (914 stems) and the least recorded was S. mauritianum (44). Additionally, there were differences in the general distribution of the seven species across residential neighbourhoods, with C. laevigatum (71.2 %), M. azedarach (49.3 %) and S. mauritianum (60.0 %) concentrated in township neighbourhoods, whilst A. mearnsii (66.4 %), L. camara (64.1 %) and Eucalyptus spp. (48.6 %) were most common in the affluent neighbourhoods. This study confirms that woody IAS are widespread in small towns of the region, but that they are unevenly distributed between towns and landuses within towns, indicating the need for local-scale inventories and management.
- Full Text:
- Date Issued: 2021
An octabrominated Sn (iv) tetraisopropylporphyrin as a photosensitizer dye for singlet oxygen biomedical applications
- Babu, Balaji, Mack, John, Nyokong, Tebello
- Authors: Babu, Balaji , Mack, John , Nyokong, Tebello
- Date: 2020
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/186679 , vital:44524 , xlink:href="https://doi.org/10.1039/D0DT01915A"
- Description: Two novel Sn(IV) tetraisopropylphenylporphyrins have been synthesized to explore the effect of octabromination at the β-pyrrole positions on their photophysical properties and photodynamic activity. The lower energy Q band of an octabrominated complex lies at 675 nm well within the therapeutic window. The octabrominated dye has a relatively high singlet oxygen quantum yield of 0.78 in DMF and exhibits favorable photodynamic activity against MCF-7 cells with an IC50 value of 10.7 μM and a 5.74 log reduction value (5 μM) towards S. aureus under illumination at 660 nm for 60 min with a Thorlabs M660L3 LED (280 mW cm−2).
- Full Text:
- Date Issued: 2020
- Authors: Babu, Balaji , Mack, John , Nyokong, Tebello
- Date: 2020
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/186679 , vital:44524 , xlink:href="https://doi.org/10.1039/D0DT01915A"
- Description: Two novel Sn(IV) tetraisopropylphenylporphyrins have been synthesized to explore the effect of octabromination at the β-pyrrole positions on their photophysical properties and photodynamic activity. The lower energy Q band of an octabrominated complex lies at 675 nm well within the therapeutic window. The octabrominated dye has a relatively high singlet oxygen quantum yield of 0.78 in DMF and exhibits favorable photodynamic activity against MCF-7 cells with an IC50 value of 10.7 μM and a 5.74 log reduction value (5 μM) towards S. aureus under illumination at 660 nm for 60 min with a Thorlabs M660L3 LED (280 mW cm−2).
- Full Text:
- Date Issued: 2020
Antiplasmodial Activity of the n-Hexane Extract from Pleurotus ostreatus (Jacq. ex. Fr) P. Kumm
- Afieroho, Ozadheoghene E, Siwe-Noundou, Xavier, Onyia, Chiazor P, Festus, Osamuyi H, Chukwu, Elizabeth C, Adedokun, Olutayo M, Isaacs, Michelle, Hoppe, Heinrich C, Krause, Rui W M, Abo, Kio A
- Authors: Afieroho, Ozadheoghene E , Siwe-Noundou, Xavier , Onyia, Chiazor P , Festus, Osamuyi H , Chukwu, Elizabeth C , Adedokun, Olutayo M , Isaacs, Michelle , Hoppe, Heinrich C , Krause, Rui W M , Abo, Kio A
- Date: 2019
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/194981 , vital:45516 , xlink:href="https://doi.org/10.4274/tjps.18894"
- Description: Objectives: Several mushrooms species have been reported to be nematophagous and antiprotozoan. This study reported the antiplasmodial and cytotoxic properties of the n-hexane extract from the edible mushroom Pleurotus ostreatus and the isolation of a sterol from the extract. Materials and Methods: Antiplasmodial and cytotoxicity assays were done in vitro using the plasmodium lactate dehydrogenase assay and human HeLa cervical cell lines, respectively. The structure of the isolated compound from the n-hexane extract was elucidated using spectroscopic techniques. Results: The n-hexane extract (yield: 0.93% w/w) showed dose dependent antiplasmodial activity with the trend in parasite inhibition of: chloroquine (IC50=0.016 μg/mL) > n-hexane extract (IC50=25.18 μg/mL). It also showed mild cytotoxicity (IC50>100 μg/mL; selectivity index >4) compared to the reference drug emetine (IC50=0.013 μg/mL). The known sterol, ergostan-5,7,22-trien-3-ol, was isolated and characterized from the extract. Conclusion: This study reporting for the first time the antiplasmodial activity of P. ostreatus revealed its nutraceutical potential in the management of malaria.
- Full Text:
- Date Issued: 2019
- Authors: Afieroho, Ozadheoghene E , Siwe-Noundou, Xavier , Onyia, Chiazor P , Festus, Osamuyi H , Chukwu, Elizabeth C , Adedokun, Olutayo M , Isaacs, Michelle , Hoppe, Heinrich C , Krause, Rui W M , Abo, Kio A
- Date: 2019
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/194981 , vital:45516 , xlink:href="https://doi.org/10.4274/tjps.18894"
- Description: Objectives: Several mushrooms species have been reported to be nematophagous and antiprotozoan. This study reported the antiplasmodial and cytotoxic properties of the n-hexane extract from the edible mushroom Pleurotus ostreatus and the isolation of a sterol from the extract. Materials and Methods: Antiplasmodial and cytotoxicity assays were done in vitro using the plasmodium lactate dehydrogenase assay and human HeLa cervical cell lines, respectively. The structure of the isolated compound from the n-hexane extract was elucidated using spectroscopic techniques. Results: The n-hexane extract (yield: 0.93% w/w) showed dose dependent antiplasmodial activity with the trend in parasite inhibition of: chloroquine (IC50=0.016 μg/mL) > n-hexane extract (IC50=25.18 μg/mL). It also showed mild cytotoxicity (IC50>100 μg/mL; selectivity index >4) compared to the reference drug emetine (IC50=0.013 μg/mL). The known sterol, ergostan-5,7,22-trien-3-ol, was isolated and characterized from the extract. Conclusion: This study reporting for the first time the antiplasmodial activity of P. ostreatus revealed its nutraceutical potential in the management of malaria.
- Full Text:
- Date Issued: 2019
Co (ii) Tetraphenyltetraphenanthroporphyrin@ MWCNTs
- Gu, Tingting, Tao, Jaiyu, Zhu, Weihua, Mack, John, Soy, Rodah C, Nyokong, Tebello, Xu, Haijin, Li, Minzhi, Liang, Xu
- Authors: Gu, Tingting , Tao, Jaiyu , Zhu, Weihua , Mack, John , Soy, Rodah C , Nyokong, Tebello , Xu, Haijin , Li, Minzhi , Liang, Xu
- Date: 2019
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/234580 , vital:50210 , xlink:href="https://doi.org/10.1039/C9NJ01707K"
- Description: Herein, a cobalt(II)tetraphenyltetraphenanthroporphyrin (Co(II)TPTPP) with phenanthrene-fused pyrrole rings was synthesized and characterized. Moreover, a detailed analysis of its optical and redox properties was carried out by comparing the results obtained via optical spectroscopy and electrochemistry with the trends predicted via a series of DFT and TD-DFT calculations. The electrochemistry results demonstrated that the π-expanded Co(II)TPTPP interacted strongly with multiwall carbon nanotubes (MWCNTs), which were finally immobilized on carbon nanotubes via noncovalent interactions and further deposited on glassy carbon. This strong immobilization via π–π stacking between Co(II)TPTPP and MWCNTs leads to significantly stable electrochemically catalyzed hydrogen evolution reaction (HER) and oxygen reduction reaction (ORR), which provides a new insight into the understanding electron transfer channels.
- Full Text:
- Date Issued: 2019
- Authors: Gu, Tingting , Tao, Jaiyu , Zhu, Weihua , Mack, John , Soy, Rodah C , Nyokong, Tebello , Xu, Haijin , Li, Minzhi , Liang, Xu
- Date: 2019
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/234580 , vital:50210 , xlink:href="https://doi.org/10.1039/C9NJ01707K"
- Description: Herein, a cobalt(II)tetraphenyltetraphenanthroporphyrin (Co(II)TPTPP) with phenanthrene-fused pyrrole rings was synthesized and characterized. Moreover, a detailed analysis of its optical and redox properties was carried out by comparing the results obtained via optical spectroscopy and electrochemistry with the trends predicted via a series of DFT and TD-DFT calculations. The electrochemistry results demonstrated that the π-expanded Co(II)TPTPP interacted strongly with multiwall carbon nanotubes (MWCNTs), which were finally immobilized on carbon nanotubes via noncovalent interactions and further deposited on glassy carbon. This strong immobilization via π–π stacking between Co(II)TPTPP and MWCNTs leads to significantly stable electrochemically catalyzed hydrogen evolution reaction (HER) and oxygen reduction reaction (ORR), which provides a new insight into the understanding electron transfer channels.
- Full Text:
- Date Issued: 2019
Development, manufacture and characterization of niosomes for the delivery for nevirapine
- Witika, Bwalya A, Walker, Roderick B
- Authors: Witika, Bwalya A , Walker, Roderick B
- Date: 2019
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/183514 , vital:44002 , xlink:href="https://doi.org/10.1691/ph.2019.8168"
- Description: Nevirapine (NVP), used for the treatment of HIV/AIDS, exhibits unpredictable oral bioavailability, has a poor side effect profile and requires frequent dosing. Niosomes are novel drug delivery systems that have the potential to overcome these challenges. A thin layer hydration approach was used to produce niosomes and optimisation was undertaken using design of experiments (DoE) and response surface methodology (RSM) establish and identify parameters that may affect the manufacture of niosomes. The impact of cholesterol and surfactant content, hydration time and temperature on manufacture was investigated. Critical quality attributes (CQA) in respect of particle size (PS), entrapment efficiency (EE), polydispersity index (PDI) and the amount of NVP released at 48 hours was also assessed. The optimised niosome composition was identified and manufactured and the CQA characterised prior to placing the batch on stability for 12 weeks at 4±2 °C and 22±2 °C. The PS, PDI, EE and % NVP released at 48 h was 523.36±23.16 nm, 0.386±0.054, 96.8 % and 25.3 % for niosomes manufactured with Span® 20. Similarly, the parameters were 502.87±21.77 nm and 0.394±0.027, 98.0 % and 25.0 % for mean PS, PDI, EE and %NVP released at 48 h for Span® 80 niosomes. All characterisation was undertaken on the day of manufacture. In conclusion, a simple, cheap, rapid and precise method of manufacture of NVP niosomes was developed, validated and optimised using DoE and RSM and the product exhibited the target CQA.
- Full Text:
- Date Issued: 2019
- Authors: Witika, Bwalya A , Walker, Roderick B
- Date: 2019
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/183514 , vital:44002 , xlink:href="https://doi.org/10.1691/ph.2019.8168"
- Description: Nevirapine (NVP), used for the treatment of HIV/AIDS, exhibits unpredictable oral bioavailability, has a poor side effect profile and requires frequent dosing. Niosomes are novel drug delivery systems that have the potential to overcome these challenges. A thin layer hydration approach was used to produce niosomes and optimisation was undertaken using design of experiments (DoE) and response surface methodology (RSM) establish and identify parameters that may affect the manufacture of niosomes. The impact of cholesterol and surfactant content, hydration time and temperature on manufacture was investigated. Critical quality attributes (CQA) in respect of particle size (PS), entrapment efficiency (EE), polydispersity index (PDI) and the amount of NVP released at 48 hours was also assessed. The optimised niosome composition was identified and manufactured and the CQA characterised prior to placing the batch on stability for 12 weeks at 4±2 °C and 22±2 °C. The PS, PDI, EE and % NVP released at 48 h was 523.36±23.16 nm, 0.386±0.054, 96.8 % and 25.3 % for niosomes manufactured with Span® 20. Similarly, the parameters were 502.87±21.77 nm and 0.394±0.027, 98.0 % and 25.0 % for mean PS, PDI, EE and %NVP released at 48 h for Span® 80 niosomes. All characterisation was undertaken on the day of manufacture. In conclusion, a simple, cheap, rapid and precise method of manufacture of NVP niosomes was developed, validated and optimised using DoE and RSM and the product exhibited the target CQA.
- Full Text:
- Date Issued: 2019
Elephant effects on treefall and logfall highlight the absence of megaherbivores in coarse woody debris conceptual frameworks
- Landman, Marietjie, Mgqatsa, Nokubonga, Cromsigt, Joris P, Kerley, Graham I H
- Authors: Landman, Marietjie , Mgqatsa, Nokubonga , Cromsigt, Joris P , Kerley, Graham I H
- Date: 2019
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/462614 , vital:76319 , xlink:href="https://doi.org/10.1016/j.foreco.2019.02.015"
- Description: Despite the importance of coarse woody debris (CWD) in woody ecosystems, conceptual frameworks of its dynamics currently exclude the role of the megaherbivores, focusing instead on the role of insects, disease, fire, wind and droughts. However, recognizing the ecological roles of the megaherbivores is one of the most urgent contemporary issues, particularly as their decline will likely have unanticipated outcomes at the ecosystem-level. Here we used sites with and without elephants in a semi-arid woodland ecosystem in South Africa to test whether elephants changed the quantitative and qualitative features of the CWD profile in relation to other wood producers. We show that elephants increased the abundance of CWD, influenced its quality by toppling mostly maturing trees, and changed the distribution of large woody items along gentle hillslopes. Surprisingly, and despite the recognized importance of both CWD and elephants for biodiversity, there is almost no published data on the role of elephants in shaping wood-living communities by changing fallen woody debris dynamics. Our study contributes towards developing a broader conceptual framework of CWD dynamics that includes the role of megaherbivores and provides a novel view of the ecological consequences of the loss of the Pleistocene megaherbivores. Our findings have important implications for CWD restoration efforts in transformed systems that previously supported megaherbivores.
- Full Text:
- Date Issued: 2019
- Authors: Landman, Marietjie , Mgqatsa, Nokubonga , Cromsigt, Joris P , Kerley, Graham I H
- Date: 2019
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/462614 , vital:76319 , xlink:href="https://doi.org/10.1016/j.foreco.2019.02.015"
- Description: Despite the importance of coarse woody debris (CWD) in woody ecosystems, conceptual frameworks of its dynamics currently exclude the role of the megaherbivores, focusing instead on the role of insects, disease, fire, wind and droughts. However, recognizing the ecological roles of the megaherbivores is one of the most urgent contemporary issues, particularly as their decline will likely have unanticipated outcomes at the ecosystem-level. Here we used sites with and without elephants in a semi-arid woodland ecosystem in South Africa to test whether elephants changed the quantitative and qualitative features of the CWD profile in relation to other wood producers. We show that elephants increased the abundance of CWD, influenced its quality by toppling mostly maturing trees, and changed the distribution of large woody items along gentle hillslopes. Surprisingly, and despite the recognized importance of both CWD and elephants for biodiversity, there is almost no published data on the role of elephants in shaping wood-living communities by changing fallen woody debris dynamics. Our study contributes towards developing a broader conceptual framework of CWD dynamics that includes the role of megaherbivores and provides a novel view of the ecological consequences of the loss of the Pleistocene megaherbivores. Our findings have important implications for CWD restoration efforts in transformed systems that previously supported megaherbivores.
- Full Text:
- Date Issued: 2019