Mesozooplankton and particle dynamics in Algoa Bay, South Africa
- Engelbrecht, Melindi Frances
- Authors: Engelbrecht, Melindi Frances
- Date: 2022-12
- Subjects: Marine zooplankton – Algoa bay -- South Africa , Estuarine ecology , Zooplankton –Ecology --South Africa
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/59544 , vital:62157
- Description: Coastal ecosystems provide society with important ecosystem services: climate regulation, biogeochemical nutrient and waste cycling, food security, shoreline protection, tourism, and recreational support. Increased anthropogenic pressure on coastal ecosystems and changing environmental variables ultimately affect the provision of ecosystem services. Mesozooplankton are key trophic species and biological indicators of change within the marine environment and provide sound predictions of ecosystem responses to a changing climate due to their short life cycles and physiology linked to temperature. Algoa Bay has been the subject of extensive research and monitoring and encompasses a marine protected area (Addo Elephant National Park MPA). The Underwater Vision Profiler 5 (UVP5) was utilised with conventional sampling techniques of the PELTER monitoring program (i.e., Bongo nets) to investigate mesozooplankton (200 – 2000 µm) and particle (> 100 µm) dynamics within the dynamic coastal ecosystem of Algoa Bay, located within warmtemperate South Africa, in spring 2020 and summer 2021. This study revealed seasonal shifts in mesozooplankton taxa succession from spring herbivorous/omnivorous, dominated by copepods, to summer omnivorous/carnivorous mesozooplankton, dominated by copepods, Noctiluca sp., Cladocera, doliolids, salps and siphonophores. The mesozooplankton integrated abundance (mean ± standard error) increased from spring to summer, with 101 ± 26 (min. – max.: 18 – 200) x 103 ind m¯ 2 and 422 ± 80 (min. – max.: 37 – 1056) x 103 ind m¯ 2 , respectively. In summer, mesozooplankton composition was affected by the passage of a Natal Pulse, identified from satellite-derived sea level anomaly data. This study also provided the first vertical profiles of copepod distributions and suspended particles in Algoa Bay, with a peak of small particle (< 1 mm ESD) biomass close to the bottom and often, but not systematically, higher copepod abundances above the thermocline. The results presented herein are expected to contribute to the understanding of the coastal pelagic ecosystem in Algoa Bay in response to environmental perturbations , Thesis (MSc) -- Faculty of Science, School of Environmental Sciences, 2022
- Full Text:
- Date Issued: 2022-12
- Authors: Engelbrecht, Melindi Frances
- Date: 2022-12
- Subjects: Marine zooplankton – Algoa bay -- South Africa , Estuarine ecology , Zooplankton –Ecology --South Africa
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/59544 , vital:62157
- Description: Coastal ecosystems provide society with important ecosystem services: climate regulation, biogeochemical nutrient and waste cycling, food security, shoreline protection, tourism, and recreational support. Increased anthropogenic pressure on coastal ecosystems and changing environmental variables ultimately affect the provision of ecosystem services. Mesozooplankton are key trophic species and biological indicators of change within the marine environment and provide sound predictions of ecosystem responses to a changing climate due to their short life cycles and physiology linked to temperature. Algoa Bay has been the subject of extensive research and monitoring and encompasses a marine protected area (Addo Elephant National Park MPA). The Underwater Vision Profiler 5 (UVP5) was utilised with conventional sampling techniques of the PELTER monitoring program (i.e., Bongo nets) to investigate mesozooplankton (200 – 2000 µm) and particle (> 100 µm) dynamics within the dynamic coastal ecosystem of Algoa Bay, located within warmtemperate South Africa, in spring 2020 and summer 2021. This study revealed seasonal shifts in mesozooplankton taxa succession from spring herbivorous/omnivorous, dominated by copepods, to summer omnivorous/carnivorous mesozooplankton, dominated by copepods, Noctiluca sp., Cladocera, doliolids, salps and siphonophores. The mesozooplankton integrated abundance (mean ± standard error) increased from spring to summer, with 101 ± 26 (min. – max.: 18 – 200) x 103 ind m¯ 2 and 422 ± 80 (min. – max.: 37 – 1056) x 103 ind m¯ 2 , respectively. In summer, mesozooplankton composition was affected by the passage of a Natal Pulse, identified from satellite-derived sea level anomaly data. This study also provided the first vertical profiles of copepod distributions and suspended particles in Algoa Bay, with a peak of small particle (< 1 mm ESD) biomass close to the bottom and often, but not systematically, higher copepod abundances above the thermocline. The results presented herein are expected to contribute to the understanding of the coastal pelagic ecosystem in Algoa Bay in response to environmental perturbations , Thesis (MSc) -- Faculty of Science, School of Environmental Sciences, 2022
- Full Text:
- Date Issued: 2022-12
Foraging in a dynamic environment: movement and stable isotope ecology of marine top predators breeding at the Prince Edward Archipelago
- Authors: Carpenter-Kling, Tegan
- Date: 2020
- Subjects: Marine ecology , Stable isotope tracers , Estuarine ecology
- Language: English
- Type: Thesis , Doctoral , DPhil
- Identifier: http://hdl.handle.net/10948/49049 , vital:41596
- Description: Marine ecosystems are experiencing rapid changes due to climate change. The associated temporal and spatial changes in resource distribution impacts on the foraging behaviour of marine top predators. If these changes negatively affect the ability of marine predators to forage efficiently, there may be dire consequences for their populations. However, evidence of foraging plasticity during adverse conditions, or generalist foraging behaviour, can allow inference about the resilience of species to environmental change and provide essential knowledge towards effective and proactive conservation measures. I examined plasticity in the trophic ecology of 12 marine predator species breeding on Marion Island, southern Indian Ocean, over three years (2015 – 2018), a period characterized by pronounced environmental variability. Firstly, I correlated behavioural states inferred along the GPS tracks of incubating wandering, grey-headed, sooty and light-mantled albatrosses to environmental variables that are indicative of biologically productive oceanographic features. Secondly, I analysed δ13C and δ15N blood values in 12 marine predator species (the afore-mentioned albatrosses as well as king, gentoo, macaroni and eastern rockhopper penguins, northern and southern giant petrels and Antarctic and sub-Antarctic fur seals) over two seasons: summer and autumn. My results revealed that the foraging behaviour of all the species is, to some degree, either plastic (temporally variable isotopic niche) or general (large isotopic niche which remained similar over time), except for the king penguin (small isotopic niche which remained similar over time), a known foraging specialist. Furthermore, despite their dynamic foraging behaviour, resource partitioning among the predators was maintained over time. Due to the ease and relatively low cost of collecting tissues for stable isotope analysis it has the potential to be a powerful tool to monitor the trophic ecology of marine predators. I thus used my simultaneously collected dataset of GPS tracks with the stable isotope blood compositions to investigate some of the assumptions underlying the inferences made from marine predator δ13C and δ15N blood values. I reconstructed species- and guild- specific δ13C and δ15N isoscapes for eight seabird species. Following this, I coupled individual-based movement models of northern giant petrels with global marine isotope models to explore the sensitivity of tissue δ13C values to a range of extrinsic (environmental) and intrinsic (behavioural, physiological) drivers. My results demonstrate the strong influence of reference isoscapes on the inference of stable isotope compositions of marine predators. Furthermore, I show that caution should be used when using non-species-specific or temporally inaccurate isoscapes. I furthermore demonstrate that biological interactions, such as competition for food resources, either past or present, as well as spatio-temporal distribution of food patches strongly influence the foraging behaviour of marine predators. These findings highlight the importance of integrating biological interactions in species distribution models which are used to predict possible distributional shifts of marine predators in the context of global changes. My thesis further developed previously available methods and presents a novel approach to investigate sources of variance in the stable isotopic composition of animals’ tissues.
- Full Text:
- Date Issued: 2020
- Authors: Carpenter-Kling, Tegan
- Date: 2020
- Subjects: Marine ecology , Stable isotope tracers , Estuarine ecology
- Language: English
- Type: Thesis , Doctoral , DPhil
- Identifier: http://hdl.handle.net/10948/49049 , vital:41596
- Description: Marine ecosystems are experiencing rapid changes due to climate change. The associated temporal and spatial changes in resource distribution impacts on the foraging behaviour of marine top predators. If these changes negatively affect the ability of marine predators to forage efficiently, there may be dire consequences for their populations. However, evidence of foraging plasticity during adverse conditions, or generalist foraging behaviour, can allow inference about the resilience of species to environmental change and provide essential knowledge towards effective and proactive conservation measures. I examined plasticity in the trophic ecology of 12 marine predator species breeding on Marion Island, southern Indian Ocean, over three years (2015 – 2018), a period characterized by pronounced environmental variability. Firstly, I correlated behavioural states inferred along the GPS tracks of incubating wandering, grey-headed, sooty and light-mantled albatrosses to environmental variables that are indicative of biologically productive oceanographic features. Secondly, I analysed δ13C and δ15N blood values in 12 marine predator species (the afore-mentioned albatrosses as well as king, gentoo, macaroni and eastern rockhopper penguins, northern and southern giant petrels and Antarctic and sub-Antarctic fur seals) over two seasons: summer and autumn. My results revealed that the foraging behaviour of all the species is, to some degree, either plastic (temporally variable isotopic niche) or general (large isotopic niche which remained similar over time), except for the king penguin (small isotopic niche which remained similar over time), a known foraging specialist. Furthermore, despite their dynamic foraging behaviour, resource partitioning among the predators was maintained over time. Due to the ease and relatively low cost of collecting tissues for stable isotope analysis it has the potential to be a powerful tool to monitor the trophic ecology of marine predators. I thus used my simultaneously collected dataset of GPS tracks with the stable isotope blood compositions to investigate some of the assumptions underlying the inferences made from marine predator δ13C and δ15N blood values. I reconstructed species- and guild- specific δ13C and δ15N isoscapes for eight seabird species. Following this, I coupled individual-based movement models of northern giant petrels with global marine isotope models to explore the sensitivity of tissue δ13C values to a range of extrinsic (environmental) and intrinsic (behavioural, physiological) drivers. My results demonstrate the strong influence of reference isoscapes on the inference of stable isotope compositions of marine predators. Furthermore, I show that caution should be used when using non-species-specific or temporally inaccurate isoscapes. I furthermore demonstrate that biological interactions, such as competition for food resources, either past or present, as well as spatio-temporal distribution of food patches strongly influence the foraging behaviour of marine predators. These findings highlight the importance of integrating biological interactions in species distribution models which are used to predict possible distributional shifts of marine predators in the context of global changes. My thesis further developed previously available methods and presents a novel approach to investigate sources of variance in the stable isotopic composition of animals’ tissues.
- Full Text:
- Date Issued: 2020
Network analysis of trophic linkages in two sub-tropical estuaries along the South-East coast of South Africa
- Authors: Vosloo, Mathys Christiaan
- Date: 2012
- Subjects: Estuaries -- South Africa -- Eastern Cape , Estuarine ecology , Network analysis (Planning)
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:10708 , http://hdl.handle.net/10948/d1010966 , Estuaries -- South Africa -- Eastern Cape , Estuarine ecology , Network analysis (Planning)
- Description: Estuaries are some of the most productive yet threatened ecosystems in the world. Despite their importance they face significant threats through changes to river flow, eutrophication, rapid population growth long the caost and harvesting of natural resources. A number of international studies have been conducted investigating the structure and functioning of an array of ecosystems using ecological network analysis. Energy flow networks have been contsructed for coastal, lagoonal, intertidial and, most notably, permantently open estuaries. Despite the valualble insights contributed by these and other studies, a lack of information on the majority of estuarine ecosystems exists.
- Full Text:
- Date Issued: 2012
- Authors: Vosloo, Mathys Christiaan
- Date: 2012
- Subjects: Estuaries -- South Africa -- Eastern Cape , Estuarine ecology , Network analysis (Planning)
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:10708 , http://hdl.handle.net/10948/d1010966 , Estuaries -- South Africa -- Eastern Cape , Estuarine ecology , Network analysis (Planning)
- Description: Estuaries are some of the most productive yet threatened ecosystems in the world. Despite their importance they face significant threats through changes to river flow, eutrophication, rapid population growth long the caost and harvesting of natural resources. A number of international studies have been conducted investigating the structure and functioning of an array of ecosystems using ecological network analysis. Energy flow networks have been contsructed for coastal, lagoonal, intertidial and, most notably, permantently open estuaries. Despite the valualble insights contributed by these and other studies, a lack of information on the majority of estuarine ecosystems exists.
- Full Text:
- Date Issued: 2012
Physico-chemical and microalgal characteristics of the Goukamma Estuary
- Authors: Kaselowski, Tanja
- Date: 2012
- Subjects: Estuarine ecology , Estuaries -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10623 , http://hdl.handle.net/10948/d1011130 , Estuarine ecology , Estuaries -- South Africa
- Description: Estuaries are intrinsically complex and dynamic ecosystems that display marked spatial and temporal variability. Because estuaries are situated at the receiving end of catchment activities, they are at particular risk of alterations to their natural complexity. The overarching objective of this study was to gain an overview of the abiotic conditions and biotic response of the Goukamma Estuary, a small temporarily open/closed estuary (TOCE) which is situated in a relatively undisturbed catchment in the Southern Cape. Physico-chemical properties drive estuarine ecology, and together with biological indicators, are commonly assessed to determine the present status of an estuary. During the study, physico-chemical parameters reflected great spatial and temporal variability in response to the mouth state over a 13 month period. Parameters ranged within expected limits, as proposed by the conceptual model for water quality of TOCE’s (Snow and Taljaard 2007). Of particular importance was the prominent occurrence of salinity stratification and hypoxic conditions (dissolved oxygen [DO] < 3 mg l-1) during both open and closed mouth states. Data indicated that in the wide and shallow lower reaches, weak stratification gradients were present and oxygenated conditions (DO > 6 mg l-1) were maintained throughout the water column mainly by wind and tidal action. However, stratification increased towards the deeper, channel-like middle and upper reaches of the estuary, followed by a significant reduction in bottom DO concentrations and development of hypoxia and anoxia. Bottom water hypoxia commonly occurs in microtidal estuaries due to the limited influence of mixing forces, mainly by wind and tidal action. The Goukamma Estuary is a channel-like microtidal estuary where stratification effectively limited oxygenation of the bottom water which resulted in frequent occurrence of bottom water hypoxia. During June 2010 when the highest local rainfall (75 mm) was recorded for the region, salinity and DO data showed that this amount of rainfall was insignificant as it did not replenish the water column of oxygen. Only the surface 0.5 m layer was fresh and oxygenated while below this, the water column was completely hypoxic. In an unimpacted state, the Goukamma Estuary is a blackwater system and is expected to be nutrient poor; however, farming activities in the catchment have resulted in elevated nutrient concentrations. This study showed that significantly higher nutrient concentrations were measured in the middle and upper reaches of the estuary, adjacent to cattle farms situated in the floodplain of these reaches. Nutrient concentrations represented mesotrophic (dissolved inorganic nitrogen [DIN] > 500 μg l-1) to eutrophic conditions (dissolved inorganic phosphorus [DIP] > 25 μg l-1). Nutrient input stimulated phytoplankton to attain a significantly high biomass, ranging between 0.3 – 112 μg l-1 (~ 7.7 ± 1.3 μg l-1; n = 128) and 0.8 – 289 μg l-1 (~ 21.1 ± 4.4 μg l-1; n = 80) during the open and closed states, respectively. High organic loads are associated with high oxygen demands which consequently result in hypoxia following decomposition. Exacerbated by natural salinity stratification which effectively limits oxygenation of the water column, unnaturally high nutrient concentrations and coinciding organic loads place the estuary at particular risk of degradation. This study captured key patterns and processes by quantifying salinity, oxygen and nutrient concentrations in addition to biological indicators (phytoplankton biomass and community composition). Considering possible budget constraints, it is recommended that monthly salinity and oxygen concentrations should be monitored as well as seasonal nutrient concentrations. It is also recommended that riparian buffer zones should be established in the middle and upper reaches of the estuary, as these vegetation buffers have been well documented to contribute to nutrient attenuation and improved water quality from agricultural run-off.
- Full Text:
- Date Issued: 2012
- Authors: Kaselowski, Tanja
- Date: 2012
- Subjects: Estuarine ecology , Estuaries -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10623 , http://hdl.handle.net/10948/d1011130 , Estuarine ecology , Estuaries -- South Africa
- Description: Estuaries are intrinsically complex and dynamic ecosystems that display marked spatial and temporal variability. Because estuaries are situated at the receiving end of catchment activities, they are at particular risk of alterations to their natural complexity. The overarching objective of this study was to gain an overview of the abiotic conditions and biotic response of the Goukamma Estuary, a small temporarily open/closed estuary (TOCE) which is situated in a relatively undisturbed catchment in the Southern Cape. Physico-chemical properties drive estuarine ecology, and together with biological indicators, are commonly assessed to determine the present status of an estuary. During the study, physico-chemical parameters reflected great spatial and temporal variability in response to the mouth state over a 13 month period. Parameters ranged within expected limits, as proposed by the conceptual model for water quality of TOCE’s (Snow and Taljaard 2007). Of particular importance was the prominent occurrence of salinity stratification and hypoxic conditions (dissolved oxygen [DO] < 3 mg l-1) during both open and closed mouth states. Data indicated that in the wide and shallow lower reaches, weak stratification gradients were present and oxygenated conditions (DO > 6 mg l-1) were maintained throughout the water column mainly by wind and tidal action. However, stratification increased towards the deeper, channel-like middle and upper reaches of the estuary, followed by a significant reduction in bottom DO concentrations and development of hypoxia and anoxia. Bottom water hypoxia commonly occurs in microtidal estuaries due to the limited influence of mixing forces, mainly by wind and tidal action. The Goukamma Estuary is a channel-like microtidal estuary where stratification effectively limited oxygenation of the bottom water which resulted in frequent occurrence of bottom water hypoxia. During June 2010 when the highest local rainfall (75 mm) was recorded for the region, salinity and DO data showed that this amount of rainfall was insignificant as it did not replenish the water column of oxygen. Only the surface 0.5 m layer was fresh and oxygenated while below this, the water column was completely hypoxic. In an unimpacted state, the Goukamma Estuary is a blackwater system and is expected to be nutrient poor; however, farming activities in the catchment have resulted in elevated nutrient concentrations. This study showed that significantly higher nutrient concentrations were measured in the middle and upper reaches of the estuary, adjacent to cattle farms situated in the floodplain of these reaches. Nutrient concentrations represented mesotrophic (dissolved inorganic nitrogen [DIN] > 500 μg l-1) to eutrophic conditions (dissolved inorganic phosphorus [DIP] > 25 μg l-1). Nutrient input stimulated phytoplankton to attain a significantly high biomass, ranging between 0.3 – 112 μg l-1 (~ 7.7 ± 1.3 μg l-1; n = 128) and 0.8 – 289 μg l-1 (~ 21.1 ± 4.4 μg l-1; n = 80) during the open and closed states, respectively. High organic loads are associated with high oxygen demands which consequently result in hypoxia following decomposition. Exacerbated by natural salinity stratification which effectively limits oxygenation of the water column, unnaturally high nutrient concentrations and coinciding organic loads place the estuary at particular risk of degradation. This study captured key patterns and processes by quantifying salinity, oxygen and nutrient concentrations in addition to biological indicators (phytoplankton biomass and community composition). Considering possible budget constraints, it is recommended that monthly salinity and oxygen concentrations should be monitored as well as seasonal nutrient concentrations. It is also recommended that riparian buffer zones should be established in the middle and upper reaches of the estuary, as these vegetation buffers have been well documented to contribute to nutrient attenuation and improved water quality from agricultural run-off.
- Full Text:
- Date Issued: 2012
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