Habitat use of important juvenile fish species in temperate Earnestine nursery areas with notes on feeding ecology and historical shifts to assist with conservation planning, South Africa
- Authors: Nel, Larize
- Date: 2018
- Subjects: Mariculture -- South Africa , Fishes -- Ecology -- South Africa Fishes -- Food -- South Africa
- Language: English
- Type: Thesis , Doctoral , DPhil
- Identifier: http://hdl.handle.net/10948/32904 , vital:32396
- Description: Estuaries are among the most productive ecosystems worldwide as they provide important refuge and feeding areas for the juveniles of many marine species, many of which have recreational importance. The use of these nursery areas by juvenile fishes in South Africa are in need of further investigation and many critical areas such as shallow water creeks and vegetated habitats remain understudied. By using mixed-methods, estuarine fish assemblages were assessed in five permanently open estuaries in the Eastern Cape Province of South Africa. A total of 81 428 comprising 24 families and 40 species of fishes were sampled by means of a 50 m seine net (12 mm mesh) along the length of these systems that comprised of six equidistant sites during the summer recruitment period (October - December) of 2014 and 2015. A higher catch per unit effort (CPUE) was recorded in 2014 (68 875) compared to the following year where a decline of approximately 82% was observed in the catch (12 553) for all estuaries except the Kromme Estuary. Catches were mainly dominated by the marine estuarine dependent sparid, Rhabdosargus holubi and the solely estuarine clupeid, Gilchristella aestuaria. Species compositions and catch abundance with regards to historical catches showed that the abundance of many marine estuarine dependent juveniles as well as important recreational species have declined within these systems and are mainly attributed to marine overfishing and the exploitation of undersized individuals in estuarine nurseries. Juvenile fishes that occur in these estuaries utilize a range of vegetated habitats ranging from salt marsh creeks, Zostera capensis beds, Spartina maritima and previously unexplored Phragmites australis areas. Sampling was achieved by using passive, double-winged, six-hooped fyke nets, 1 mm mesh size that was secured in placed on the nocturnal flood tide at each inundated vegetated and adjacent unvegetated habitat types. Higher catches were frequently recorded in vegetated areas for solely estuarine and marine estuarine dependent species and supports evidence of plasticity within these habitats. In general, the previously unstudied reed, P. australis showed the highest species richness and abundance of juvenile fishes overall, followed by, Z. capensis and the intertidal salt marsh species, S. maritima. These findings relate to many international trends on the value of vegetated areas as refugia for young fishes in estuaries. Fishes were also showing evidence of feeding and sheltering in these areas. By using conventional stomach contents and stable isotope methods (δ13C and δ15N signatures) on the abundant R. holubi in previously selected vegetation sites, it was clear that this species has a significant reliance on any of these habitats as their diets was largely comprised of a mixture of epiphytic algae and aquatic macrophytes. In addition, the diet of larger individuals (>80 mm) showed a greater component of invertebrates in previously unexplored habitats, which proves their omnivorous diet related to ontogenetic niche use. Knowledge of fine-scale habitat use by fishes is essential for conservation planning as exclusion zones can be optimised to limit anthropogenic influence on nursery use patterns in fishes. The availability of shallow water habitats (<60 cm) was assessed as an additional driver to explain the species diversity and richness of juvenile fishes within the lower reaches. These habitats are known as important nursery habitats providing numerous marine and estuarine spawned fishes with adequate refuge and food supply. This shallow water volume was measured by means of a two-man kayak using both the spring high and low tides in the lower reaches of these systems to assess juvenile assemblages. It was clear from the results that aquatic vegetation significantly adds to the volume of these areas and as a result, much greater fish density and species richness were observed. Generalized additive models showed that marine spawned species were particularly reliant on the availability of this shallow water along with submerged vegetation and additional environmental variables. The presence of structurally submerged vegetation typically characterized within shallow estuarine waters is commonly believed to reduce predation risk resulting in elevated densities of biota. Based on the current stock status and percentage of pristine breeding stock, five fish species classified as collapsed/overexploited was consistently found within these systems with an additional 14 species currently classified as exploited/vulnerable. Based on the current species richness and diversity, available habitat cover and knowledge regarding important recreational species, priority areas that require some form of legal protection in order to meet potential biodiversity targets, could be identified. It is a legal requirement in South Africa that all estuaries require management plans that should be based on good knowledge of priority habitats for fauna and flora. The identification of estuarine protected areas is seen as a mechanism for protecting a representative sample of the biodiversity accompanied by a complete range of environmental gradients and habitat types at a reasonable scale in order to maximize the protection of estuarine species.
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- Date Issued: 2018
Mariculture as a means to add value to the east coast rock lobster Panulirus homarus rubellus subsistence fishery : a physiological approach to define transport and growout protocols for wild caught juveniles
- Authors: Kemp, Justin Oliver Gordon
- Date: 2009
- Subjects: Lobster fisheries -- South Africa , Lobster culture -- South Africa , Lobsters -- Growth -- South Africa , Mariculture -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5299 , http://hdl.handle.net/10962/d1005144
- Description: In a context of declining capture fisheries and public pressure for greater access to marine resources, marine aquaculture is receiving increasing interest from the South African government as a means to increase the diversity of economic activities in coastal regions, thereby providing employment and reducing poverty. The east coast rock lobster Panulirus homarus rubellus is currently harvested by subsistence fisherman along the former Transkei coastline of south-east South Africa and presents a possible opportunity for ongrowing wild juvenile lobsters in culture facilities. Lack of compliance coupled with poor enforcement of the minimum size limit (65 mm carapace length) has resulted in the ongoing harvest of undersize size lobsters by subsistence fishers. Generally, fishers either consume these undersize lobsters or sell them to tourists for low prices. In line with international trends in rock lobster aquaculture, interest has subsequently arisen in the possibilities of ongrowing these undersize lobsters as a means of adding value to the P. h rubellus resource for subsistence fishers. The aim of this physiological study was to assess the biological feasibility of harvesting, transporting and culturing wild caught juvenile lobsters, thereby provide empirical data to inform the development of suitable transport and culture protocols. The experimental objectives were to asses the effect of temperature on growth and survival of P. h. rubellus, as well as the effects of a suite of extrinsic and intrinsic factors on ammonia excretion and oxygen consumption. Juvenile lobsters were collected by hand from near-shore reefs (2-15 m depth) off Mdumbi in the former Transkei, Eastern Cape Province and transported by road (7 hours) to the Port Alfred Marine Research Laboratory where they were held in a recirculating culture system. The effect of temperature over a range of 9.7 °C (18.9±0.7 to 28.6±1.5 °C) on the growth and survival of juvenile P. h. rubellus fed a diet of fresh mussel flesh was investigated. Specific growth rate (SGR) was significantly different between temperatures (p = 0.01), with the highest values recorded for the 24 °C and 28 °C treatments. There was no significant difference in moult increment (MI) between temperatures, however, intermoult period (IMP) differed significantly between temperatures (p = 0.0015) with mean IMP lowest at 24 °C, although not significantly different from the means of the 26 °C and 28 °C treatments. IMP was highest at 19 °C and 21 °C. Apparent feed intake was significantly different between treatments (p < 0.0001) and exhibited a strong positive correlation with increasing temperature. Food conversion ratio (FCR) differed significantly between temperatures (p = 0.02) with 24 °C exhibiting the most efficient FCR. The results for growth rate and food conversion efficiency suggested that 24 °C is optimal for the growout of juvenile P. h. rubellus. In the second study, the effect of body weight, emersion, daily rhythm, feeding and ambient ammonia on the total ammonia nitrogen (TAN) excretion rate was investigated. Body weight (n = 16, range of 16.8 – 322 g) was positively correlated to daytime TAN excretion rate (mg h⁻¹). Re-immersion after one hour emersion in a moist environment was characterized by a significant increase in TAN excretion rate for the first hour compared to pre-immersion levels. The amount of TAN excreted during this period was as expected if basal TAN excretion rates were maintained during emersion. TAN excretion rates returned to pre-emersion levels by the end of the second hour. There was no evidence of a daily rhythm in TAN excretion rate for P. h. rubellus. TAN excretion rates were elevated following feeding. An initial peak in TAN excretion rate after seven hours (7.58 times pre-feeding rate) was followed by a smaller peak after 13 hours (6.69 times pre-feeding rate). TAN excretion rate dropped to levels not significantly different from pre-feeding levels after 23 hours and consistently returned to pre-feeding levels after 42 hours. The TAN excretion rates of lobster exposed for two hours to an ambient TAN concentration of 1.02±0.10 mg l⁻¹ and 2.3± 0.2 mg l⁻¹ were not significantly different from TAN excretion rates recorded at low ambient water TAN prior to exposure. Exposure to an ambient TAN concentration of 4.45±0.78 mg l⁻¹ had a significant effect on the TAN excretion rate, with pronounced ammonia uptake occurring for all animals at this concentration. The third study investigated the effects of body weight, diurnal rhythm, feeding and emersion on lobster oxygen consumption. Body weight was positively correlated to both standard and active oxygen consumption (mg O2 h⁻¹) while body weight was negatively correlated to mass-specific standard oxygen uptake (mg O2 g⁻¹ h⁻¹). Diurnal rhythm exhibited a strong effect on the lobsters oxygen consumption, with average night time values 67% greater than those recorded during the day. This was related to activity driven by intrinsic nocturnal foraging behaviour. Feeding resulted in a classic specific dynamic action (SDA) response, with postprandial oxygen consumption increasing to a peak before decreasing gradually to preprandial levels. Emersion resulted in a significant increase in oxygen consumption, with lobsters rapidly recovering to pre-emersion levels after four hours. Results from these studies suggest that the capture, transport and culture of juvenile P. h. rubellus is biologically feasible. Empirical data generated were used to provide recommendations regarding species optimised transport and culture protocols. A purge time of 48 hours before transport is suggested to ensure that ammonia excretion and oxygen consumption are at basal levels. Furthermore, emersed transport for a period of one hour is characterised by rapid recovery upon re-immersion. In order to prevent the accumulation of stressors, it is suggested that consecutive periods of emersion are interjected with recovery periods (five hours) in water to allow the removal of accumulated ammonia and repayment of the oxygen debt incurred. The recorded ammonia rates indicate that a biological filter size of 4.8 m³ is recommended for 1000 kg of fed lobsters in a culture situation, although this can be reduced considerably if lobsters are being held without feeding (0.72 m³). A flow rate of 112 l kg⁻¹ h⁻¹ is required to meet the metabolic requirements of lobsters. Bottlenecks to the viable commercial culture of P. h. rubellus, and the ability of this practice to provide the socio-economic benefits that were envisioned, are discussed.
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- Date Issued: 2009
Salinity induced physiological responses in juvenile dusky kob, Argyrosomus japonicus (Sciaenidae)
- Authors: Bernatzeder, Andrea Katinka
- Date: 2009
- Subjects: Osmoregulation , Argyrosomus -- Effects of salt on -- South Africa , Sciaenidae -- Effects of salt on -- South Africa , Argyrosomus -- Physiology , Sciaenidae -- Physiology , Fishes -- Physiology , Biological control systems , Marine ecology -- South Africa , Fishery management -- South Africa , Mariculture -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5318 , http://hdl.handle.net/10962/d1005163 , Osmoregulation , Argyrosomus -- Effects of salt on -- South Africa , Sciaenidae -- Effects of salt on -- South Africa , Argyrosomus -- Physiology , Sciaenidae -- Physiology , Fishes -- Physiology , Biological control systems , Marine ecology -- South Africa , Fishery management -- South Africa , Mariculture -- South Africa
- Description: Fisheries management regulations for dusky kob Argyrosomus japonicus, an important commercial and recreational fisheries species, have failed and the stock is considered collapsed. It is important to take an ecosystems approach to management which includes understanding the effect of environmental factors on recruitment, abundance and distribution. The distribution of early juveniles (20-150 mm TL) in the wild appears to be restricted to the upper reaches of estuaries at salinities below 5 psu. Food availability could not explain the distribution of early juveniles. The aim of this study was to investigate the role of salinity on the distribution of early juvenile dusky kob (<150 mm TL) by examining physiological responses of juveniles exposed to a range of salinities under laboratory conditions. The hypothesis was that the physiological functioning of early juveniles would be optimised at the reduced salinities which they naturally occur at. The objectives of this study were to investigate the effect of salinity on: i) plasma osmolality; ii) growth, food conversion ratio and condition factor; and iii) gill histology with emphasis on chloride cell size and number. A preliminary study was undertaken to determine whether the use of 2-phenoxyethanol had an effect on plasma osmolality. Juveniles pithed prior to blood sampling were used as the control. Plasma osmolality was not affected by exposure or duration of exposure (2, 4, 6, 8, 10 min) to 2-phenoxyethanol. The ability of teleosts to regulate plasma osmolality over a wide range of salinities indicates their degree of ‘physiological euryhalinity’. Plasma osmolality of juveniles exposed to 5, 12 and 35 psu was measured every two weeks over a total of six weeks. Although juveniles were able to regulate plasma osmolality over the duration of the experiment, plasma osmolality at 5 and 12 psu was significantly lower than in fish maintained at 35 psu. Growth is used as an indicator of the relative energy used for osmoregulation at different salinities, as the energy used for osmoregulation becomes unavailable for growth. A nineweek growth experiment was conducted on juveniles exposed to 5, 12 and 35 psu. Juveniles grew and survived at all three salinities. However, growth of juveniles at 5 psu was significantly lower than at 12 and 35 psu. Other than a significantly greater weight gain at 35 psu relative to 12 psu, there was no significant difference in specific growth and length gain between juveniles at 12 and 35 psu. Food conversion ratio and condition factor at 12 and 35 psu were not significantly different, but food conversion ratio and condition factor at 5 psu was significantly greater and lower than at 35 psu respectively. In fish, gills are considered the major organ involved in osmoregulation. Within the gills, chloride cells are the predominant site of ion exchange which is driven by the Na⁺, K⁺- ATPase enzyme. Gill samples of juveniles exposed to 5, 12 and 35 psu for six weeks were examined histologically using light microscopy. Chloride cells of juveniles maintained at 5 psu were significantly more abundant than in juveniles at 12 and 35 psu. Chloride cells of juveniles at 5 psu were significantly larger than in juveniles kept at 12 psu, but not significantly different to those of juveniles kept at 35 psu. The ability of the juvenile fish to regulate plasma osmolality indicates that they are 'physiologically euryhaline', but the reduced growth and proliferation of chloride cells at 5 psu suggests that energy expenditure for osmoregulation is increased at hypoosmotic salinities. Salinity induced physiological responses could therefore not explain the natural distribution of early juvenile dusky kob and it is proposed that other environmental factors (e.g. temperature) are also important. It is also hypothesised that the high conductivity of an estuary in South Africa, to which our understanding is limited, may negate the effect of reduced salinity. Although freshwater input into estuaries is an important factor, further investigations to explain the distribution and abundance of early juveniles is required to make management recommendations. Dusky kob is also becoming an increasingly popular aquaculture species in South Africa. In this regard, early juvenile dusky kob can be grown at salinities as low as 12 psu without negatively affecting growth and production.
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- Date Issued: 2009
Toward the development of a rearing protocol for juvenile dusky kob, Argyrosomus japonicus (Pisces: Sciaenidae)
- Authors: Collett, Paul David
- Date: 2008
- Subjects: Argyrosomus -- South Africa , Mariculture -- South Africa , Fishes -- Nutrition -- South Africa , Fishes -- Growth -- South Africa , Fish trade -- South Africa , Sciaenidae
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5325 , http://hdl.handle.net/10962/d1005171 , Argyrosomus -- South Africa , Mariculture -- South Africa , Fishes -- Nutrition -- South Africa , Fishes -- Growth -- South Africa , Fish trade -- South Africa , Sciaenidae
- Description: The South African mariculture industry is developing the rearing technology of indigenous fish species. Dusky kob (Argyrosomus japonicus) has high-quality flesh and a good market demand. Research is needed to determine the environmental requirements under which growth of dusky kob is optimised. This study assessed the effect of temperature, light intensity, feeding frequency and stocking density, respectively, on growth, feed conversion ratio (FCR) and survival of juvenile dusky kob within a weight range of 10-60 g fish⁻¹) in a series of four growth trials. The effect of temperature on growth and FCR was assessed at 14 temperatures from 17 to 28°C. The temperature for best growth was estimated to be 25.3 °C, while 21.4 °C was the temperature at which the best FCR was achieved. A growth trial testing the effect of light intensity on growth showed that light intensity did not affect growth in the range of 23 – 315 lx. Fish fed a restricted ration of 3.6% body weight per day (chapter 2) or 3.41% body weight per day (chapter 4) had a better FCR than fish fed to satiation. A trial to assess the effect of feeding frequency on growth and FCR showed that fish fed both two or three times daily grew better than those fed once daily. FCR was best in fish that were fed once or twice daily. Preliminary analysis of the results from a stocking density trial showed that stocking density in the range of 10 – 50 kg m⁻³ did not affect growth of juvenile dusky kob. It is recommended to culture dusky kob at a temperature of 25.3 - 21.4 °C at stocking densities up 50 kg m⁻³ to maximise growth. However, a study is needed to determine the environmental conditions needed to maximise profit under commercial conditions. The results allow the South African industry the opportunity to assess the culture potential of this species. In addition, the results will help develop protocols that can be used in other South African candidate aquaculture species such as silver kob, yellowtail, white-stumpnose and sole.
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- Date Issued: 2008
The development of a geographic information system (GIS) as a mariculture sector planning tool in South Africa
- Authors: Shiran-Klotz, Imran
- Date: 2004
- Subjects: Geographic information systems -- South Africa , Fishery management -- Geographic information systems -- South Africa , Mariculture -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5337 , http://hdl.handle.net/10962/d1005870 , Geographic information systems -- South Africa , Fishery management -- Geographic information systems -- South Africa , Mariculture -- South Africa
- Description: The South African coastline has a high potential for mariculture development, particularly in land-based systems, due to excellent water quality, good infrastructure, and relatively cheap land in certain areas. Development of mariculture however, has been slow primarily due to the absence of a national sector development plan to coordinate contribution to development by government, industry and academia. Recent mariculture development plans however, supported by government commitment to stimulate coastal development, offers new opportunity for the sector's growth. These new sector development plans require a multi-disciplinary intensive information base with a strong regional and national spatial component. Geographic Information System (GIS) is a spatial analytical tool, which is capable of handling such large coastal databases and analysing them. Nevertheless, many mariculture GIS planning applications, often developed in isolation and with limited practical use for decision makers, highlighted the need to develop GIS in relation to the mariculture sector development plan. Hence, the aim of this study was to develop and evaluate a GIS for the national and regional mariculture sector planning process in South Africa, in order to identify potentially suitable areas along the South African coastline for mariculture operations. The GIS development in this study was based on the mariculture planning approach developed by PAP/RAe (1996), which recognizes the variations of scales in mariculture planning. Three case studies, representing the diversity of the South African sector plan, were selected to develop the GIS. They included: a national suitability analysis for all land-based culture systems, a specific national analysis on abalone ranching, and a detailed regional analysis of land-based culture and abalone ranching along the Namaqualand coastline. The GIS was developed separately for each case study based on a strategy consisting of six main phases, including: identification of project requirements, developing analytical framework, selection and location of data sources, organization and manipulation of data, analysing data and verifying and evaluation of the outputs. Biophysical, coastal use, and infrastructure criteria were collected, sorted and analysed to identify development constraints. Based on a set of conditions, and Boolean logic and arithmetic operations, unsuitable areas were identified and eliminated. Main constraints for national land-based development included competition over space along KwaZuluNatal Province coastline and restricted access to the coast along the south region of the Northern Cape Province, Wild Coast along the Eastern Cape Province, and Maputaland along KwaZulu-Natal Province. Ten areas along the country coastline were therefore identified as potentially suitable for land-based mariculture. Furthermore, South African abalone ranching potential was found to be limited mostly along the Western and Northern Cape Province's coastline due to the high risk of Paralytic Shellfish Poison (PSP) occurrences, alternative resource use and activities such as commercial fishery, poaching, and conservation. Hence, a total of nine areas along the Northern Cape, Western Cape, and Eastern Cape coastlines were identified as premier areas for abalone ranching. The regional study along the Namaqualand coastline revealed potential conflict between mining activity and mariculture development due to security issues and restricted access to the coast. Land-based mariculture development was confined to the four main coastal urban areas. The highest potential for land-based mariculture was along Port Nolloth and Kleinsee coastlines, whereas marine-based (i.e. abalone ranching) potential was poor along the north part of the coast due to intense marine mining activities, restricted access to the coast, and low kelp bed density. High potential abalone ranching areas were identified south to Kleinsee, and around Port Nolloth. Potential conflict with marine mining activity was minimal since it was localised and not related to kelp bed locations. It was concluded that GIS is a relevant and compatible tool for South African mariculture sector planning. However, future development of GIS as integrated planning tool in mariculture and coastal planning, requires updated spatial data (e.g. recreational activity), and continued interaction among project planners, mariculture specialists and GIS analysts.
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- Date Issued: 2004