- Title
- HUMA: A platform for the analysis of genetic variation in humans
- Creator
- Brown, David K
- Creator
- Tastan Bishop, Özlem
- Date Issued
- 2018
- Date
- 2018
- Type
- text
- Type
- article
- Identifier
- http://hdl.handle.net/10962/124653
- Identifier
- vital:35642
- Identifier
- https://doi.10.1002/humu.23334
- Description
- The completion of the human genome project at the beginning of the 21st century, along with the rapid advancement of sequencing technologies thereafter, has resulted in exponential growth of biological data. In genetics, this has given rise to numerous variation databases, created to store and annotate the ever-expanding dataset of known mutations. Usually, these databases focus on variation at the sequence level. Few databases focus on the analysis of variation at the 3D level, that is, mapping, visualizing, and determining the effects of variation in protein structures. Additionally, these Web servers seldom incorporate tools to help analyze these data. Here, we present the Human Mutation Analysis (HUMA) Web server and database. HUMA integrates sequence, structure, variation, and disease data into a single, connected database. A user-friendly interface provides click-based data access and visualization, whereas a RESTfulWebAPI provides programmatic access to the data. Tools have been integrated into HUMA to allow initial analyses to be carried out on the server. Furthermore, users can upload their private variation datasets, which are automatically mapped to public data and can be analyzed using the integrated tools. HUMA is freely accessible at https://huma.rubi.ru.ac.za.
- Format
- 12 pages
- Format
- Language
- English
- Relation
- Human Mutation
- Relation
- Brown, D.K. and Tastan Bishop, Ö., 2018. HUMA: A platform for the analysis of genetic variation in humans. Human mutation, 39(1), pp.40-51
- Relation
- Human Mutation volume 39 number 1 40 51 2018 1059-7794
- Rights
- Human Mutation
- Rights
- Use of this resource is governed by the terms and conditions of the Wiley Online Library Terms of Use statement (https://onlinelibrary.wiley.com/terms-and-conditions)
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Tastan Bishop, Ozlem (Prof)
RU Department of Biochemistry, Microbiology and Bioinformatics
SDG 03. Good Health and Well-Being
| Thumbnail | File | Description | Size | Format | |||
|---|---|---|---|---|---|---|---|
| View Details Download | SOURCE1 | HUMA.pdf | 1 MB | Adobe Acrobat PDF | View Details Download |