6-Hydroxymelatonin protects against cyanide induced oxidative stress in rat brain homogenates
- Authors: Maharaj, Deepa S , Walker, Roderick B , Glass, Beverley D , Daya, Santylal
- Date: 2003
- Language: English
- Type: Article , text
- Identifier: vital:6405 , http://hdl.handle.net/10962/d1006478
- Description: Both 6-hydroxymelatonin and N-acetyl-N-formyl-5-methoxykynurenamine are photodegradants and enzymatic metabolites of melatonin and are known to retain equipotent activity against potassium cyanide-induced superoxide generation compared to melatonin. It is not clear whether one or both of these metabolites is responsible for this effect. The present study therefore investigates the possible manner in which 6-hydroxymelatonin protects against oxidative stress induced by cyanide in rat brain homogenates. We examined the ability of 6-hydroxymelatonin to scavenge KCN-induced superoxide anion generation as well as lipid peroxidation. In addition, we also examined the effect of this indole on lactate dehydrogenase activity (LDH) as well as mitochondrial electron transport using dichlorophenol–indophenol as an electron acceptor. The results of this study show that 6-hydroxymelatonin significantly reduces KCN-induced superoxide anion generation, which is accompanied by a commensurate reduction in lipid peroxidation. Partial reversal of the KCN-induced reduction in mitochondrial electron transport is accompanied by a similar reversal of mitochondrial LDH activity blunted by KCN. It can thus be proposed that 6-hydroxymelatonin is potentially neuroprotective against KCN-induced neurotoxicity.
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- Date Issued: 2003
A proposed prioritization system for the management of invasive alien plants in South Africa
- Authors: Robertson, Mark P , Villet, Martin H , Fairbanks, Dean H K , Henderson, L , Higgins, Simon I , Hoffmann, John H , Le Maitre, David C , Palmer, Anthony R , Riggs, I , Shackleton, Charlie M , Zimmermann, Helmuth G
- Date: 2003
- Language: English
- Type: Article
- Identifier: vital:6911 , http://hdl.handle.net/10962/d1011872
- Description: Every country has weed species whose presence conflicts in some way with human management objectives and needs. Resources for research and control are limited, so priority should be given to species that are the biggest problem. The prioritization system described in this article was designed to assess objectively research and control priorities of invasive alien plants at a national scale in South Africa. The evaluation consists of seventeen criteria, grouped into five modules, that assess invasiveness, spatial characteristics, potential impact, potential for control, and conflicts of interest for each plant species under consideration. Total prioritization scores, calculated from criterion and module scores, were used to assess a species' priority. Prioritization scores were calculated by combining independent assessments provided by several experts, thus increasing the reliability of the rankings. The total confidence score, a separate index, indicates the reliability and availability of data used to make an assessment. Candidate species for evaluation were identified and assessed by several experts using the prioritization system. The final ranking was made by combining two separate indices, the total prioritization score and the total confidence score. This approach integrates the plant's perceived priority with an index of data reliability. Of the 61 species assessed, those with the highest ranks (Lantana camara, Chromolaena odorata and Opuntia ficus-indica) had high prioritization and high confidence scores, and are thus of most concern. Those species with the lowest ranks, for example, Harrisia martinii, Opuntia spinulifera and Opuntia exaltata, had low prioritization scores and high confidence scores, and thus are of least concern. Our approach to ranking weeds offers several advantages over existing systems because it is designed for multiple assessors based on the Delphi decision-making technique, the criteria contribute equally to the total score, and the system can accommodate incomplete data on a species. Although the choice of criteria may be criticized and the system has certain limitations, it appears to have delivered credible results.
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- Date Issued: 2003
Analysis of the calling songs of Platypleura hirtipennis (Germar, 1834) and P. plumosa (Germar, 1834) (Hemiptera: Cicadidae)
- Authors: Sanborn, Allen F , Phillips, Polly K F , Villet, Martin H
- Date: 2003
- Language: English
- Type: text , Article
- Identifier: vital:6896 , http://hdl.handle.net/10962/d1011656
- Description: [From the introduction]: Most male cicadas produce a calling song in order to attract conspecific females. These songs have been shown to differ in closely related species (e.g. Alexander & Moore 1962; Villet 1988, 1989; Boulard 1995; Marshall & Cooley 2000; Sanborn & Phillips 2001) and in species which share habitats (e.g. Sueur 2002). The former is an inevitable part of the divergence of recognition signals that characterizes the speciation process in animals using acoustic signals (Villet 1995), while the latter would be expected from a signal that acts as a reproductive isolating mechanism (Claridge 1985; Marshall & Cooley 2000). Calling songs are therefore of value in resolving taxonomic problems in the cicadas.
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- Date Issued: 2003
Cognitive therapy for social phobia : the human face of cognitive science
- Authors: Edwards, David J A , Henwood, Jennifer , Kannan, Swetha
- Date: 2003
- Language: English
- Type: Article
- Identifier: vital:6280 , http://hdl.handle.net/10962/d1008281
- Description: [abstract from Index to SA Periodicals]Points to the male/masculine ideology pervading science. Gives a history of cognitive science. Shows that current clinical models on which cognitive therapy treatments are based are complex and detailed, but also situated and human. Warns about the contemporary enthusiasm for cognitive science. Presents a case study which illustrates how the cognitive model of social phobia works inpractice when applied to one person's life situation.
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- Date Issued: 2003
Comparing models for predicting species' potential distributions : a case study using correlative and mechanistic predictive modelling techniques
- Authors: Robertson, Mark P , Peter, Craig I , Villet, Martin H , Ripley, Bradford S
- Date: 2003
- Language: English
- Type: Article
- Identifier: vital:6539 , http://hdl.handle.net/10962/d1005980 , http://dx.doi.org/10.1016/S0304-3800(03)00028-0
- Description: Models used to predict species’ potential distributions have been described as either correlative or mechanistic. We attempted to determine whether correlative models could perform as well as mechanistic models for predicting species potential distributions, using a case study. We compared potential distribution predictions made for a coastal dune plant (Scaevola plumieri) along the coast of South Africa, using a mechanistic model based on summer water balance (SWB), and two correlative models (a profile and a group discrimination technique). The profile technique was based on principal components analysis (PCA) and the group-discrimination technique was based on multiple logistic regression (LR). Kappa (κ) statistics were used to objectively assess model performance and model agreement. Model performance was calculated by measuring the levels of agreement (using κ) between a set of testing localities (distribution records not used for model building) and each of the model predictions. Using published interpretive guidelines for the kappa statistic, model performance was “excellent” for the SWB model (κ=0.852), perfect for the LR model (κ=1.000), and “very good” for the PCA model (κ=0.721). Model agreement was calculated by measuring the level of agreement between the mechanistic model and the two correlative models. There was “good” model agreement between the SWB and PCA models (κ=0.679) and “very good” agreement between the SWB and LR models (κ=0.786). The results suggest that correlative models can perform as well as or better than simple mechanistic models. The predictions generated from these three modelling designs are likely to generate different insights into the potential distribution and biology of the target organism and may be appropriate in different situations. The choice of model is likely to be influenced by the aims of the study, the biology of the target organism, the level of knowledge the target organism’s biology, and data quality.
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- Date Issued: 2003
Disgraceland: history and the humanities in frontier country
- Authors: Cornwell, Gareth D N
- Date: 2003
- Language: English
- Type: Article
- Identifier: vital:6117 , http://hdl.handle.net/10962/d1004618
- Description: This paper explores the significance of Coetzee's choice of Salem in the Eastern Cape as the (part) setting for his novel Disgrace. A determinedly local and historical reading of the text suggests that Lucy's conduct represents an "ideal" solution to the historical issues of wrong and reparation raised in the novel. This finding is scrutinized through a reading of "The Humanities in Africa" from Elizabeth Costello, and it is concluded that whatever hope for rehabilitation or redemption the novel holds out for white South Africans necessarily exists beyond the discourse of the humanities, indeed, outside of history itself.
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- Date Issued: 2003
Disturbances of attitudes and behaviours related to eating in black and white females at high school and university in South Africa
- Authors: Edwards, David J A , d'Agrela, A , Geach, M , Welman, Mark
- Date: 2003
- Language: English
- Type: Article
- Identifier: vital:6246 , http://hdl.handle.net/10962/d1007864
- Description: This paper reports two studies, which contribute to the increasing evidence that the attitudes and behaviours associated with eating disorders, are encountered among both black and white females in South Africa. In Study One, the Eating Disorders Inventory EDI was administered to black (n=39) and white (n=41) female students in Natal. There were no significant differences between black and white on the sub-scales which measure disturbed eating behaviour directly (Drive for Thinness, Bulimia, Body Dissatisfaction). However black respondents scrored higher on Perfectionism, Interpersonal Distrust and Maturity Fears, variables believed to predispose individuals to eating disorders. In Study Two, the Bulimia Test (BULIT) was administered to black and white females at three educational levels. There was no significant effect of Ethnicity, but there was a significant effect of Age: Standard 6 respondents had significantly higher scores than University students. In both studies, Body mass index (BMI) was significantly higher among blacks than whites. In Study One there was no significant correlation between BMI and Drive for Thinness in either blacks or whites. However in Study Two, the correlation between BMI and BULIT full scale was significant in the case of both blacks (r = 0,39; p <,01) and whites (r = 0,38; p<,05). These findings are consistent with those of other recent studies, which find disturbances in eating-related attitudes and behaviour in all ethnic groups in South Africa.
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- Date Issued: 2003
Education, ethics and values : A response to Peter Blaze Corcoran’s keynote address, EEASA 2003
- Authors: van Harmelen, Ursula
- Date: 2003
- Language: English
- Type: Article
- Identifier: vital:6099 , http://hdl.handle.net/10962/d1008663
- Description: This paper is written in response to the Keynote Adress on the Earth Charter presented by Peter Blaze Corcoran at the EEASA 2003 Conference in Namibia. It draws attention to the significance of ethical debates in education and emphasises the need for careful attention to the way in which educators approach values education. In particular the paper considers the Earth Charter critically, and notes that while there is much value in the principles of the Earth Charter for guiding educational practice, educators should also consider some of the dilemmas of simply appropriating univeral ethical frameworks to guide practice.
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- Date Issued: 2003
Endothermy and chorusing behaviour in the African platypleurine cicada Pycna semiclara (Germar, 1834) (Hemiptera: Cicadidae)
- Authors: Villet, Martin H , Sanborn, Allen F , Phillips, Polly K F
- Date: 2003
- Language: English
- Type: text , Article
- Identifier: vital:6892 , http://hdl.handle.net/10962/d1011652 , http://dx.doi.org/10.1139/z03-119
- Description: Cicadas use acoustic signals to find mates and therefore offer a phylogenetically independent opportunity to test the generality of ideas about acoustic communication that were developed from studies of other animals. Pycna semiclara (Germar, 1834) (Hemiptera: Cicadidae) is a forest-dwelling platypleurine cicada that uses its calling song to form choruses and attract mates. Additionally, P. semiclara produces an encounter call that is involved in courtship and also in spacing males within choruses. Males generally call from exposed trunks and branches within the understory but clear of the undergrowth and fight with other males that call within about 50 cm of them. Choruses sing sporadically throughout the day but focus most of their calling activity into half-hour bouts at dawn and dusk. Body size and ambient temperature had no significant effect on spectral or temporal characteristics of the calling song. Body temperature measurements indicate that P. semiclara thermoregulates endothermically, with a body temperature of more than 22 °C above ambient temperature being measured during calling activity at dusk. Such endothermy provides an advantage to the cicadas by allowing them to call during crepuscular hours when atmospheric conditions are most optimal for acoustic communication and predation risks are minimal. Coincidentally, endogenously regulating body temperature allows the temporal characteristics of the call to be unaffected by ambient temperature changes.
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- Date Issued: 2003
Environmental limits to the distribution of Scaevola plumieri along the South African coast
- Authors: Peter, Craig I , Ripley, Bradford S , Robertson, Mark P
- Date: 2003
- Language: English
- Type: Article
- Identifier: vital:6872 , http://hdl.handle.net/10962/d1011617
- Description: Scaevola plumieri is an important pioneer on many tropical and subtropical sand dunes, forming a large perennial subterranean plant with only the tips of the branches emerging above accreting sand. In South Africa it is the dominant pioneer on sandy beaches along the east coast, less abundant on the south coast and absent from the southwest and west coasts. Transpiration rates (E) of S. plumieri are predictably related to atmospheric vapour pressure deficit under a wide range of conditions and can therefore be predicted from measurement of ambient temperature and relative humidity. Scaling measurements of E at the leaf level to the canopy level has been demonstrated previously. Using a geographic information system, digital maps of regional climatic variables were used to calculate digital maps of potential transpiration from mean monthly temperature and relative humidity values, effectively scaling canopy level transpiration rates to a regional level. Monthly potential transpiration was subtracted from the monthly median rainfall to produce a map of mean monthly water balance. Seasonal growth was correlated with seasonal water balance. Localities along the coast with water deficits in summer corresponded with the recorded absence of S. plumieri, which grows and reproduces most actively in the summer months. This suggests that reduced water availability during the summer growth period limits the distribution of S. plumieri along the southwest coast, where water deficits develop in summer. Temperature is also important in limiting the distribution of S. plumieri on the southwest coast of South Africa through its effects on the growth and phenology of the plant.
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- Date Issued: 2003
Ethics beyond the code of conduct - understanding the ethical dilemmas of entrepreneurs
- Authors: Robinson, D A , Van der Mescht, Hennie , Lancaster, Jonathan C S
- Date: 2003
- Subjects: To be catalogued
- Language: English
- Type: Article
- Identifier: vital:6072 , http://hdl.handle.net/10962/d1001646 , ISSN 1022-2529
- Description: Entrepreneurs choose a particular way of life with the dual aim of maximising profit and gaining a sense of self-satisfaction. In these endeavours, entrepreneurs typically live with the threat of competition and the risk of business failure, while attempting to do their best within the limitations of their resources. This qualitative study first examines existing theories of ethics and ways of applying business ethics and thereafter investigates entrepreneurs' actual experiences by means of in-depth interviews and the use of phenomenology. It finds that entrepreneurs are not guided by any specific code of conduct, and must decide for themselves what is right. It describes the entrepreneurial business ethic, some of the types of dilemmas that they experience and the methods that they have developed to deal with the dilemmas.
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- Date Issued: 2003
Foam drug delivery in dermatology: beyond the scalp
- Authors: Purdon, Carryn H , Haigh, John M , Surber, Christian , Smith, Eric W
- Date: 2003
- Subjects: Adis International Limited , Drug delivery systems , Skin disorders
- Language: English
- Type: text , Article
- Identifier: vital:6418 , http://hdl.handle.net/10962/d1006541
- Description: Consumers of topical formulations apply a wide spectrum of preparations, both cosmetic and dermatological, to their healthy or diseased skin. These formulations range in physicochemical nature from solid through semisolid to liquid. Pharmaceutical foams are pressurized dosage forms containing one or more active ingredients that, upon valve actuation, emit a fine dispersion of liquid and/or solid materials in a gaseous medium. Foam formulations are generally easier to apply, are less dense, and spread more easily than other topical dosage forms. Foams may be formulated in various ways to provide emollient or drying functions to the skin, depending on the formulation constituents. Therefore, this delivery technology should be a useful addition to the spectrum of formulations available for topical use; however, as yet, only a few are commercially available. Probably the most convincing argument for the use of foams is ease of use by the patient, and consumer acceptance. Most foam dosage forms used in dermatology to date have incorporated corticosteroids, although some products have also been used to deliver antiseptics, antifungal agents, anti-inflammatory agents, local anesthetic agents, skin emollients, and protectants. Although there is no clinical evidence that foam formulations are currently superior to other conventional delivery vehicles, these formulations have a clear application advantage and with continued developments in the science of supersaturation technology, it seems certain that foam delivery systems will retain their place in the dermatological and cosmetic armamentarium.
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- Date Issued: 2003
Geography : the state of the discipline in South Africa (2000 - 2001)
- Authors: Fairhurst, U J , Davies, R J , Fox, Roddy C , Goldschagg, P , Ramutsindela, M , Bob, U , Khosa, M M
- Date: 2003
- Language: English
- Type: Article
- Identifier: vital:6678 , http://hdl.handle.net/10962/d1006659
- Description: The research team presents the findings of a comprehensive investigation into the status and role of Geography as an academic discipline in South Africa. The paper begins by placing the discipline in historical and epistemological context. Extensive and intensive interviews were conducted with geographers at all South African universities and, on a smaller scale, in the workplace. Information was also gleaned from an array of documents. Comments on the characteristics of university departments, general school education, the geography research environment the geographer in the workplace are given. Emerging trends, many of which relate to recent socio-political change, show that contemporary emphasis is on applied geography, specific fields of specialisation, the accommodation of Environmental Science and Environmental Management, skills training and on curriculum development with a marked vocational orientation. As geographers continue addressing national and international environmental and social issues in their professional endeavours, they are alerted to critical concerns voiced with conviction by practising geographers. In the final analysis a positive conclusion is reached and the academic merit and status of the discipline is confirmed.
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- Date Issued: 2003
Glasbury man made Clyro bells
- Authors: Lewis, Colin A
- Date: 2003
- Language: English
- Type: Article
- Identifier: vital:6182 , http://hdl.handle.net/10962/d1012377
- Description: [From Introduction] There must have been great excitement in Clyro in 1708. The existing four bells in St Michael's Church were recast by Henry Williams, the bell founder from Glasbury, into a ring of five bells. The work was apparently paid for by the owners of two of the great houses in the parish: Cabalva and Lloyney. Little is known of the four bells that existed in Clyro before Williams began his work, although they appear to have been larger than the five bells cast from their metal. The four bells swung side by side in a wooden frame in the tower of the church. This frame was altered in 1708 to accommodate bells of smaller dimensions and a fifth bell pit was added at right angles to the others. , Colin Lewis was Professor of Geography at Rhodes University, Grahamstown, South Africa from 1989 until his retirement at the end of 2007. In 1990, with the strong support of the incumbent Vice-Chancellor, Dr Derek Henderson, he instigated the Certificate in Change Ringing (Church Bell Ringing) in the Rhodes University Department of Music and Musicology - the first such course to be offered in Africa. Since that date he has lectured in the basic theory, and taught the practice of change ringing. He is the Ringing Master of the Cathedral of St Michael and St George, Grahamstown, South Africa.
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- Date Issued: 2003
Hot-blooded singers: endothermy facilitates crepuscular signaling in African platypleurine cicadas (Hemiptera: Cicadidae: Platypleura spp.)
- Authors: Sanborn, Allen F , Villet, Martin H , Phillips, Polly K F
- Date: 2003
- Language: English
- Type: text , Article
- Identifier: vital:6919 , http://hdl.handle.net/10962/d1011882
- Description: The cicada genus Platypleura has a wide distribution across Africa and southern Asia. We describe endothermic thermoregulation in four South African species that show crepuscular signaling behavior. This is the first evidence of thermoregulation in platypleurine cicadas. Field measurements of body temperature (Tb) show that these animals regulate Tb through endogenous heat production. Maximum Tb measured was 22.1°C above ambient temperature during calling activity at dusk. The mean Tb during dusk activity did not differ from the mean Tb during diurnal activity. A unique behavior for cicadas, a temperature-dependent telescoping pulsation of the abdomen, was observed in the laboratory during endogenous warm-up. This behavior is part of a unique method of heat generation in endothermic cicadas. Males generally call from trunks and branches within the canopy and appear to use endothermy even when the sun is available to elevate Tb. Endothermy may provide the cicadas with the advantage of decreasing predation and acoustic competition by permitting calling from perches that most complement their cryptic coloration patterns and that ectotherms cannot use due to thermal constraints. In addition, endothermy may permit calling activity during crepuscular hours when atmospheric conditions are optimal for acoustic communication and predation risks are minimal.
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- Date Issued: 2003
IsiXhosa insect names from the Eastern Cape, South Africa
- Authors: Mkize, Nolwazi , Villet, Martin H , Robertson, Mark P
- Date: 2003
- Language: English
- Type: Article
- Identifier: vital:6859 , http://hdl.handle.net/10962/d1011148
- Description: We present a list of isiXhosa names for a wide diversity of South African insects, and their English translations and scientific names, to contribute to bridging the knowledge gap between rural development workers and isiXhosa speakers. We interviewed 51 people in their homes at eight sites across the Eastern Cape and also included words from a published dictionary. We found 151 insect names, and categorized them into personal, dialectal and standard categories. Response-frequency distributions of the categories of names showed that the dialectal and standard lists were essentially complete. Sample accumulation curves showed levelling-off within sites and across the whole study, demonstrating that samples were adequate. The literal translations of some names show that isiXhosa speakers relate insects either to people, to their habitat and/or to their behaviour. The list can contribute to the standardization of knowledge of insects' indigenous names in South Africa for a variety of practical applications such as agricultural training and health services.
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- Date Issued: 2003
Molecular identification of some forensically important blowflies of southern Africa and Australia
- Authors: Harvey, M L , Mansell, M W , Villet, Martin H , Dadour, I R
- Date: 2003
- Language: English
- Type: text , Article
- Identifier: vital:6953 , http://hdl.handle.net/10962/d1011986
- Description: One major aspect of research in forensic entomology is the investigation of molecular techniques for the accurate identification of insects. Studies to date have addressed the corpse fauna of many geographical regions, but generally neglected the southern African calliphorid species. In this study, forensically significant calliphorids from South Africa, Swaziland, Botswana and Zimbabwe and Australia were sequenced over an 1167 base pair region of the COI gene. Phylogenetic analysis was performed to examine the ability of the region to resolve species identities and taxonomic relationships between species. Analyses by neighbour-joining, maximum parsimony and maximum likelihood methods all showed the potential of this region to provide the necessary species-level identifications for application to post-mortem interval (PMI) estimation; however, higher level taxonomic relationships did vary according to method of analysis. Intraspecific variation was also considered in relation to determining suitable maximum levels of variation to be expected during analysis. Individuals of some species in the study represented populations from both South Africa and the east coast of Australia, yet maximum intraspecific variation over this gene region was calculated at 0.8%, with minimum interspecific variation at 3%, indicating distinct ranges of variation to be expected at intra- and interspecific levels. This region therefore appears to provide southern African forensic entomologists with a new technique for providing accurate identification for application to estimation of PMI.
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- Date Issued: 2003
Mythic and theoretic aspects of the concept of 'the unconscious' in popular and psychological discourse
- Authors: Edwards, David J A
- Date: 2003
- Language: English
- Type: Article
- Identifier: vital:6227 , http://hdl.handle.net/10962/d1007777
- Description: From the introduction: In Greek mythology, Typhon was the youngest son of Gaea (the Earth) and Tartarus (the underworld). Typhon was not a beautiful baby. He was a grisly monster with a hundred dragons' heads. He was one of the Titans, a group of powerful and dangerous creatures who rebelled against Zeus, the King of the Gods. The rebellion was crushed and Typhon was imprisoned under Mount Etna, the volcano in Sicily which was active in classical times and remains active today. It was said that when Typhon raged, the earth shook and Etna erupted. Many such tales from mythology from all over world seem to dramatize aspects of our relationship with potent forces of which we have little understanding and over which we have little control. Many of these forces are less concrete than the forces of nature. They arise from our apprehension of our existential predicaments, our interpersonal vulnerability and the intensity of our own psychological pain. In many contemporary discourses this territory is referred to more neutrally as ‘the unconscious;’ but the unconscious will always elude our attempts to capture it in words.
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- Date Issued: 2003
Peals in Africa
- Authors: Lewis, Colin A
- Date: 2003
- Language: English
- Type: Article
- Identifier: vital:6166 , http://hdl.handle.net/10962/d1012354
- Description: Colin Lewis was Professor of Geography at Rhodes University, Grahamstown, South Africa from 1989 until his retirement at the end of 2007. In 1990, with the strong support of the incumbent Vice-Chancellor, Dr Derek Henderson, he instigated the Certificate in Change Ringing (Church Bell Ringing) in the Rhodes University Department of Music and Musicology - the first such course to be offered in Africa. Since that date he has lectured in the basic theory, and taught the practice of change ringing. He is the Ringing Master of the Cathedral of St Michael and St George, Grahamstown, South Africa.
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- Date Issued: 2003
Phylogenetics of advanced snakes (Caenophidia) based on four mitochondrial genes
- Authors: Kelly, Christopher M R , Barker, Nigel P , Villet, Martin H
- Date: 2003
- Language: English
- Type: Article
- Identifier: vital:6960 , http://hdl.handle.net/10962/d1012005
- Description: Phylogenetic relationships among advanced snakes ( Acrochordus + Colubroidea = Caenophidia) and the position of the genus Acrochordus relative to colubroid taxa are contentious. These concerns were investigated by phylogenetic analysis of fragments from four mitochondrial genes representing 62 caenophidian genera and 5 noncaenophidian taxa. Four methods of phylogeny reconstruction were applied: matrix representation with parsimony (MRP) supertree consensus, maximum parsimony, maximum likelihood, and Bayesian analysis. Because of incomplete sampling, extensive missing data were inherent in this study. Analyses of individual genes retrieved roughly the same clades, but branching order varied greatly between gene trees, and nodal support was poor. Trees generated from combined data sets using maximum parsimony, maximum likelihood, and Bayesian analysis had medium to low nodal support but were largely congruent with each other and with MRP supertrees. Conclusions about caenophidian relationships were based on these combined analyses. The Xenoderminae, Viperidae, Pareatinae, Psammophiinae, Pseudoxyrophiinae, Homalopsinae, Natricinae, Xenodontinae, and Colubrinae (redefined) emerged as monophyletic, whereas Lamprophiinae, Atractaspididae, and Elapidae were not in one or more topologies. A clade comprising Acrochordus and Xenoderminae branched closest to the root, and when Acrochordus was assessed in relation to a colubroid subsample and all five noncaenophidians, it remained associated with the Colubroidea. Thus, Acrochordus + Xenoderminae appears to be the sister group to the Colubroidea, and Xenoderminae should be excluded from Colubroidea. Within Colubroidea, Viperidae was the most basal clade. Other relationships appearing in all final topologies were (1) a clade comprising Psammophiinae, Lamprophiinae, Atractaspididae, Pseudoxyrophiinae, and Elapidae, within which the latter four taxa formed a subclade, and (2) a clade comprising Colubrinae, Natricinae, and Xenodontinae, within which the latter two taxa formed a subclade. Pareatinae and Homalopsinae were the most unstable clades.
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- Date Issued: 2003