Changes in diet resource use by elephants, Loxodonta Africana, due to changes in resource availability in the Addo National Park
- Authors: Du Toit, Jana
- Date: 2015
- Subjects: Elephants -- Nutrition -- South Africa -- Eastern Cape , Elephants -- Habitat -- South Africa -- Eastern Cape , Wildlife conservation , Addo Elephant National Park (South Africa)
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10731 , ISSN http://hdl.handle.net/10948/d1021194
- Description: Animals are restricted in their diets by several factors, most notably the availability and quality of resources. Variation in resource availability causes herbivores to shift their diets seasonally and spatially. Elephants (Loxodonta africana), are known to have extensive impacts on plant communities, altering ecosystem functioning and causing a decline in biodiversity. In enclosed areas, these impacts are increased leading to a decline in resource availability and presumably resource quality. In the Addo Elephant National Park, the Main Camp section has a history of high elephant impacts and therefore reduced resource availability. Whereas, the recently added Colchester section has greater resource availability, due to the absence of elephants in this section since the fencing of the Park. This study investigated the changes in diet (diet breadth, preference and diet quality) of elephants due to an increase in resource availability. Three alternative hypotheses were contrasted: 1) elephants as generalist foragers, 2) elephants as optimal foragers, or 3) elephants learning foraging behaviour. Using microhistological analysis, the diets of elephants were described over five sampling periods (August 2010 – February 2014) in both sections. Forage availability was estimated using a modified line-intercept method, and was used to determine changes in preference by relating forage availability to use. In the Colchester section the diet breadth of elephants increased, and was coupled with a high initial variation between the diets of elephants, which decreased in subsequent sampling periods. This supported the elephants learning foraging behaviour hypothesis. However, there was no increase in diet preference by elephants in the Colchester section, which supported the elephants as generalist foragers hypothesis. There was also no difference in the diet quality of elephants in the Main Camp and Colchester sections, which did not support any of the three hypotheses. The elephants learning foraging behaviour hypothesis is proposed to be the link between the alternate two hypotheses, and given enough time, either of the two could be supported. The lack of difference in preference and diet quality between elephants in the Main Camp and Colchester sections is hypothesised to be due to the population level (not measured for individuals) at which these were measured. Microhistological analysis of faeces was used to describe the diet of elephants, which was compared to the diet described by DNA metabarcoding. Microhistological analysis is a traditional, favoured technique used in describing the diet of wild herbivores, whereas DNA metabarcoding is a relatively new and untested technique. These two techniques have not yet been compared in the diet of megaherbivores. Results indicated that microhistological analysis identified significantly more grass in the diet of elephants, than DNA metabarcoding did, which was expected as previous studies also found overestimation of grasses. Microhistological analysis identified more plant families in the diet of elephants, than DNA metabarcoding. Most of the differences between the two techniques can be attributed to the difference in taxonomic resolution, which was due to the lack of a complete reference collection for DNA metabarcoding. Although either of the two techniques can be used to describe the diet of elephants, the most reliable results would be obtained when using both techniques. The findings of this study suggest that due to the high initial variation between the diets of elephants, with an increase in resource availability, the impacts will also initially be highly varied. This suggests that identifying plant species to monitor elephants impacts initially will be difficult. However, important plant species, or those known to be vulnerable to elephants impacts should be carefully monitored initially and monitoring should not only occur annually, but also seasonally.
- Full Text:
- Date Issued: 2015
Decision making for investment in residential real estate
- Authors: James, Matthew Gary Robert
- Date: 2015
- Subjects: Real estate investment -- Decision making Investment analysis
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/10868 , vital:26831
- Description: Investment in residential real estate involves almost all members of the public at some stage of their lives, whether this be one's first home or the purchasing of one‟s first investment property. Understanding how to maximise the return on one's investment is something that can benefit the investor from before the investment is made until after the property has been sold, if it is sold at all. Literature surveys have concluded that there are a number of variables to consider when maximising the return on investment. As residential real estate is not a perfect science, there are guidelines and routes that are more beneficial to the investor depending on the current market, environment and economic standing. A survey was undertaken by members of the public that are involved in residential real estate investment, relative to the maximisation of the return on investment in residential real estate. The salient findings include: Investors in residential real estate spend more than average to extensive time prior, to investment researching the chosen residential real estate property; Investors in residential real estate perform a feasibility study before committing to the development whereas; Investors in residential real estate make use of financial advisors/valuers/estate agents or other investors' knowledge bases in deciding whether to invest in a residential property development; Investors in residential real estate believe that their degree of knowledge about the residential property market and residential property investments are average to very high. Investors in residential real estate somewhat agree that residential real estate investors do not effectively manage their investments. It was recommended that investors make use of help and guidance when investing in residential real estate, perform a feasibility study and ensure that they know their market before investing in a project. It was also noted that location plays a large role when deciding on an investment opportunity worth investing into. By creating awareness and ensuring that all methods and guidelines have been used to maximise the returns that their proposed residential real estate investment, investors can ensure a stronger, healthier cash flow and reap the highest possible benefits from their residential real estate portfolio.
- Full Text:
- Date Issued: 2015
Defect-related photoluminescence of zinc oxide nanorods
- Authors: Mbulanga, Crispin Munyelele
- Date: 2015
- Subjects: Photoluminescence Zinc oxide
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/10318 , vital:26652
- Description: In this dissertation, Zinc oxide (ZnO) nanorods grown by a two-step chemical bath deposition method on Si substrate is characterized. Research was conducted on ZnO nanorods for the understanding of their optical properties at room temperature (RT), with the emphasis on the visible luminescence. To this end, controlled thermal treatments of as-grown ZnO nanorods were conducted under different conditions, such as annealing time and environment, at atmospheric pressure. Results related to the following studies are reported: an investigation of the structure of ZnO nanorods, an analysis of the chemical composition of the surface, an investigation of the surface stoichiometry of the rods, and a study of defect-related photoluminescence of ZnO nanorods upon thermal treatment in different ambients.To achieve this, the samples were investigated by Scanning Electron Microscopy (SEM), X-ray Diffraction (XRD), Time-of-Flight Secondary Ion Mass Spectrometry (ToF-SIMS), X-ray Photoelectron Spectroscopy (XPS), Auger Electron Spectroscopy (AES) and room temperature (RT) photoluminescence Spectroscopy (PL). As-grown ZnO nanorods exhibit a hexagonal shape and have the wurtzite structure; they have, respectively, an average length and diameter of ~900 nm and ~50 nm, and most of the rods are perpendicular to the substrate. The main extrinsic species found in as-grown nanostructures are C, H, F, S, and Cl. ToF-SIMS and XPS confirmed the presence of H related-defects, and the oxygen 1 S XPS peak at 531.5 eV is therefore assigned to oxygen bound to H-related defects. Based on stoichiometry studies, it is found that the near surface regions of as-grown ZnO nanorods (2 to 10 monolayers) are rich in Zn. The RT luminescence of as-grown ZnO nanorods exhibits a near band edge emission centered at ~379.5 nm and deep level emission extending from ~450 nm to ~850 nm. When these nanorods are thermally treated at high temperatures (>850 oC), it is found that even though their crystalline quality is preserved, their morphology is significantly affected, regardless of annealing ambient. Furthermore, in the near surface regions of annealed ZnO nanorods it is found that the Zn/O stoichiometric ratios deviate from unity. Specifically, oxygen vacancies form within the first 100 nm from the sample surface. Further from the surface, the material is deficient in Zn. It is deduced from XPS and AES that the ambient affects the activation rate of intrinsic defects. Furthermore, the only extrinsic defects that are affected by thermal treatment are found to be H-related defects. At high annealing temperatures (300 oC to ~700 oC), H-related defects are removed, and this removal process is found to affect significantly the RT luminescence properties of ZnO nanorods. Specifically, hydrogen passivates vacancy-related defects, depending on the thermal treatment. PL spectroscopy is used to follow this passivation effect as a function of annealing temperature, which causes an initial quenching followed by an enhancement of the green and the red luminescence, regardless of the ambient. Finally, the green luminescence that arises following annealing above ~800 oC is assigned to Zn vacancy-related defects, while the red luminescence that dominates the visible band of ZnO nanorods upon annealing between 400 oC and 600 oC is suggested to be due to oxygen vacancy-related defects.
- Full Text:
- Date Issued: 2015
Determination of the effects of sunlight and UV irradiation on the structure, viability and reapplication frequency of the biopesticide cryptophlebia leucotreta granulovirus in the protection against false codling moth infestation of citrus crops
- Authors: Mwanza, Patrick
- Date: 2015
- Subjects: Cryptophlebia leucotreta -- Effect of ultraviolet radiation on , Natural pesticides
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/6346 , vital:21075
- Description: Cryptophlebia leucotreta granulovirus (CrleGV-SA) is a baculovirus specifically pathogenic to the citrus pest false codling moth, Thaumatotibia leucotreta. CrleGV- SA is formulated as a commercial biopesticide, Cryptogran® (River Bioscience, South Africa). The virus has a stable, proteinaceous crystalline occlusion body (OB) that protects the nucleocapsid. The major limitation to the use of baculoviruses is their susceptibility to the ultraviolet (UV) component of sunlight, which rapidly and greatly reduces their efficacy as biopesticides. The UVA and UVB components are the most destructive to biological organisms. To date no publication has reported the effect of UV on the structure and virulence of CrleGV, or the effectiveness of the OB as a UV protectant. In this study the effect of UV irradiation on the structure and infectivity of pure CrleGV-SA and Cryptogran® was investigated using scanning electron microscopy (SEM), Raman spectroscopy, qPCR, and bioassays. The project included laboratory and field studies. In the laboratory, CrleGV-SA and Cryptogran® were exposed to either UVA or UVB for periods of 24 hours to 7 days before analysis. In the field, Cryptogran® was applied to trees in a citrus orchard with young fruit. The fruit were collected from 24 hours to 28 days after application and bioassays conducted to assess the effect of sunlight over time on virus structure and efficacy when applied to the northern or southern sides of the trees. No surface morphological changes to the virus were detected using SEM. However, small compositional changes were detected by Raman spectroscopy. qPCR and bioassays demonstrated that UV irradiation damaged the viral DNA, greatly reducing the infectivity of pure CrleGV-SA and Cryptogran®. Exposure to UVB reduced the virulence of the virus more than UVA. The field studies revealed that the activity of CrleGV-SA decreased more on the northern side of the trees than on the southern side.
- Full Text:
- Date Issued: 2015
Ecological risk assessment of fisheries on sea turtles in the South Western Indian Ocean
- Authors: Mellet, Bernice
- Date: 2015
- Subjects: Sea turtles -- Indian Ocean Fisheries -- Indian Ocean
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/9957 , vital:26636
- Description: The SWIO is an area of great biodiversity and included in the diverse species that occupy the region are five species of sea turtles that include green turtles, hawksbills, leatherbacks, loggerheads and olive ridleys. Despite considerable conservation efforts at sea turtle rookeries in the South Western Indian Ocean, only green and loggerhead turtle populations have shown an increase in population size in recent years (<10 years), whereas leatherbacks remained stable and hawksbills and olive ridleys declined. This begs the question if fisheries (or other offshore pressures) are responsible for slowing the recovery of these populations in the region, and if so, which specific fisheries are responsible for this trend? Several offshore (mostly industrial) and coastal (mostly artisanal) fisheries overlap with sea turtle distribution at sea. Industrial fisheries that are globally known to have a demonstrable impact on sea turtle populations are longline and to a lesser extent purse seine fisheries, whilst prawn trawl, gillnet and beach seine fisheries are coastal fisheries with a known negative impact on sea turtle populations. Holistic conservation strategies should be developed that include both land and sea protection for sea turtle species. It is thus necessary to identify and manage offshore threats including fisheries activities, particularly those fisheries that are showing the highest risk to sea turtle populations. This prompted an investigation into the bycatch rates and mortality of all sea turtle species that occur in the SWIO region in several offshore and coastal fisheries including both industrial (longline, purse seine and prawn trawl) and artisanal (including gillnet and beach seine) fisheries. The specific aims were (i) to identify and quantify the interactions (and if possible mortality) of sea turtle species in fisheries and (ii) to identify vulnerable species/populations to fishing operations using a semi-quantitative Ecological Risk Assessment (ERA) in the form of a Productivity-Susceptibility Analysis (PSA). Published information, online databases and technical reports were used as data sources to establish a database containing essential information regarding fishing effort and sea turtle bycatch in the region. The existing information was used to map fisheries extent and effort within the region, and to perform bycatch calculations. Interactions and mortality rates for sea turtles in five fisheries were quantified using bycatch rates from regional studies. Between 2000 – 2011, industrial longline and purse seine fisheries captured sea turtles at a rate of 4 388 indiv.y-1, with the mortality rate being 189 indiv.y-1. The bulk of these interactions were in the longline industry that captured 4 129 ± 1 376 indiv.y-1, with a corresponding mortality rate of 167 ± 53 indiv.y-1. The most commonly caught species (in longlines) were loggerheads and leatherback turtles, but the greatest impact is expected to be on the leatherback population due to the high interaction rate relative to population size. The bycatch (259 ± 34 indiv.y-1) and mortality (20 ± 2 indiv.y-1) rates of sea turtles in the purse seine fishery was considerably lower than the longline fishery. The purse seine fishery thus does not seem to have a significant impact on sea turtle populations in the SWIO. The impact of all forms of fish aggregation devices were excluded from the analysis as the impacts of these are poorly documented. Coastal prawn trawl, gillnet and beach seine fisheries captured an estimate of between 50 164 - 52 370 indiv.y-1 from 2000-2011. The highest bycatch rate was estimated for gillnet fisheries (40 264 indiv.y-1) followed by beach seine fisheries (9 171 indiv.y-1) and prawn trawl fisheries (at 1089 – 2795 indiv.y-1). The gillnet fishery could be responsible for slowing the recovery rate of green turtle and leatherback populations in the SWIO due to the high capture rates in this fishery compared to the population sizes of the species. Beach seine and prawn trawl fisheries are not expected to be hamper the recovery rate of any of the populations in the SWIO due to the low levels of interactions and low mortality rates compared to the population sizes. There are however very few data available regarding the bycatch of sea turtle species within these fisheries, highlighting the need for further research regarding this. A productivity-Susceptibility Analysis (PSA) was used to evaluate the relative vulnerability of species to fisheries, and is frequently applied in data poor situations. Limited data on sea turtle life history characteristics and population dynamics of species in the SWIO prompted the use of a PSA to determine the species most vulnerable to fisheries in the region. Results of the PSA indicated that gillnet fisheries poses the largest fishery-related threat to sea turtle populations, specifically the green and leatherback populations. The longline fishery that poses a particular threat to the leatherback population in the SWIO is also a particular concern. A cumulative impact assessment (combining fisheries and other threats) indicated that the SWIO leatherback population is extremely vulnerable to the combination of threats that influence this population in the SWIO. Even though individual fisheries may pose a small threat, the cumulative impacts of the fisheries can lead to severe impacts on populations such as slowing the recovery rate of populations. There are however significant data gaps that require attention in order to fully assess the impact of these fisheries on sea turtle populations. Despite the fact that fisheries are not implicated as a mayor reason for the decline in the hawksbill and olive ridley populations in the region, these two species are in decline indicating that there are other factors responsible for the decline not yet identified. It however remains imperative to reduce the mortality from all sources to ensure the continued viability of sea turtle populations in the region.
- Full Text:
- Date Issued: 2015
Efficiency evaluation of South Africa tertiary education institutions using data envelopment analysis
- Authors: Chitekedza, Ignatious
- Date: 2015
- Subjects: Data envelopment analysis -- South Africa , Principal components analysis
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/4764 , vital:20674
- Description: With an increasing number of students enrolling at higher education institutions in South Africa, it has become important to investigate whether these institutions are using their resources adequately. This study uses data envelopment analysis (DEA) to estimate the efficiency of 23 South African tertiary education institutions based on both teaching and research outputs. Using DEA we are able to rank South African universities according to their use of resources in these two areas. These rankings can identify institutions which are performing well and also those which require improvement. The effect that merging institutions has on this efficiency is also determined. Owing to the limited sample size, variable reduction techniques, including the efficiency contribution measure (ECM) and principal components analysis (PCA-DEA), were used to improve the discrimination of the analysis.
- Full Text:
- Date Issued: 2015
Enantioselective transformations using tetrol as a chiral mediator
- Authors: Dorfling, Sasha-Lee
- Date: 2015
- Subjects: Enantioselective catalysis , Trichothecenes , Catalysts , Titanium
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10445 , http://hdl.handle.net/10948/d1021195
- Description: (+)-(2R,3R)-1,1,4,4-Tetraphenylbutane-1,2,3,4-tetraol (TETROL) and its derivatives were reacted with varying molar ratios of titanium isopropoxide (2:1, 1:1 and 1:2 tetraol:titanium isopropoxide) in an attempt to prepare potential titanium-based tetraol catalysts for enantioselective transformations. In each case, infrared and HNMR spectra suggested that the product was formed. We tentatively proposed that the structure of the catalyst was a spiro-type, but we could not determine conclusively what its exact structure was, despite using numerous techniques at our disposal (molecular modelling calculations, H NMR and IR spectroscopy, thermal analyses, powder diffraction, and single crystal X-ray diffraction). The catalyst and derivatives thereof were able to act catalytically for the enantioselective additions of diethylzinc compounds to aldehydes. The effects of temperature and solvent were investigated, and toluene and -78 °C were selected as optimal from the results obtained. (The reaction could, however, not be maintained at this low temperature for extended periods due to the fact that we did not have, at our disposal, the correct equipment. Each 16 h reaction was thus allowed to reach room temperature in each case.) The selectivity for the product 1-phenylpropan-1-ol (when benzaldehyde was the starting aldehyde) varied depending on the nature of the aryl substituents of the titanium-based catalyst. Using 0.2 molar equivalents of the chiral titanates, the highest selectivity was 42 percent (e.e.), but only when excess Ti(O-i-Pr)4 had been added to the reaction mixture. This was achieved with the tetra(ortho-methoxyphenyl)-TETROLate derivative. TETROL and its derivatives were also successful in metal-free catalysis where higher conversions and selectivities were observed, compared to when these were complexed to titanium. The highest selectivity was 70 percent (e.e.), achieved with the tetra(ortho-methylphenyl)TETROL derivative.
- Full Text:
- Date Issued: 2015
Environmental flows, health and importance of macrophytes in the estuaries of water management area 11
- Authors: Cowie, Meredith
- Date: 2015
- Subjects: Estuarine ecology -- South Africa , Estuaries -- South Africa -- Management , Aquatic plants -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/7930 , vital:24324
- Description: Estuaries require sufficient quantity, quality and appropriate timing of freshwater inflow, referred to as environmental flow requirements, to ensure adequate health and functioning. In South Africa the environmental flow requirements of estuaries is determined using Resource Directed Measures (RDM). The present health and importance of an estuary must be considered when determining the ecological flow required to maintain an estuary in its desired state. An Estuarine Health Index that quantifies changes in abiotic and biotic components from natural conditions to present day is used. Health of biotic components is assessed according to changes in species richness, abundance and community composition. There has, however, been debate regarding the calculation of these attributes. In particular, for macrophytes, the inclusion of all habitat within the Estuarine Functional Zone (i.e. 5 m topographical contour) would affect the health and changes over time determined in past assessments. This is due to different areas being included as different areas would be included The aim of this study was to test the validity and suggest improvements to South Africa’s RDM macrophyte health score determination. The health of macrophytes were assessed at varying levels of intensity from desktop studies to thorough field studies. Rapid field studies provided a visual estimate of macrophyte health; while the intermediate and comprehensive assessments quantified change by mapping the distribution of macrophyte habitats from aerial photographs. These approaches were applied to the 64 estuaries within the Mvoti-Mzimkulu Water Management Area (WMA 11), situated in KwaZulu-Natal (KZN) on the subtropical east coast. Historically, these estuaries have supported restricted macrophyte habitats. Consequently, estuaries that presently or historically supported range limited habitats such as mangroves and swamp forest are considered important. Submerged macrophytes are scarce in KZN estuaries due to siltation and low turbidity and thus estuaries supporting this macrophyte habitat are also important. Based on available literature important estuaries were highlighted and selected for field studies. Transects spanning from the estuary water channel to the boundary of the EFZ provided a generalised distribution of KZN vegetation along an elevation gradient. The transition from estuarine to terrestrial vegetation can be used to improve the current EFZ boundaries, as estuarine area has been found to occur outside of the 5 m contour in some estuaries. Results from the desktop assessment indicated that most of the estuaries are moderately modified. There was a 50 % similarity in the macrophyte health scores determined by the desktop assessment to the 2011 National Biodiversity Assessment (NBA). Field studies mostly confirmed the desktop assessment aside from seven estuaries that had different scores. There has been a significant loss of macrophyte habitat with 100% loss of certain habitats from 9 of the 22 estuaries for which there were field assessments. Submerged macrophytes were not found at any of the estuaries that were assessed in the field. Black mangroves, Bruguiera gymnorrhiza (L.) Lam., were rediscovered at Ngane Estuary, however the few individuals could not be considered a ‘mappable’ community (i.e. <0.5 ha). Mtamvuna and Mkomazi estuaries both supported small stands of mangroves that, compared to data from 2006, appeared healthy. Macrophyte habitats and surrounding coastal forest matched the species composition described in the Vegetation Map of South Africa. The freshwater mangrove or Powder puff tree, Barringtonia racemosa (L.) Roxb, was not abundant in the estuaries. It was only found at four (Damba, Fafa, Little Amanzimtoti and Mvoti) of the estuaries that were assessed in the field. Important estuaries, from a botanical perspective, included some of the larger estuaries such as Mgeni, Durban Bay and Sipingo. Smaller, healthier estuaries that presently support mangrove and swamp forest habitat were also identified as important from a botanical perspective. Macrophyte habitats have mainly been lost due to non-flow related pressures. Sugarcane cultivation occurred within the floodplain of 25% of the estuaries. Nutrient enrichment was evident for 12.5% of the estuaries and reed encroachment was evident for 27% of estuaries for which there were field assessments. Development, aside from the N2 road bridges, was evident for 40% of the estuaries assessed in the field. Invasive plant species, including aquatic invasive plants, were present in all estuaries assessed in the field. The extent of invasive plant species was related to the degree of disturbance and surrounding land use pressures. The Mkomazi and Mvoti estuaries that were assessed at a comprehensive level, as they have earmarked for further water abstraction, had the poorest macrophyte health scores. The macrophyte health of these estuaries was much lower than previously determined by the NBA. The decline in health was attributed to the removal of macrophyte habitat for sugarcane cultivation and development as well as displacement by invasive plant species. The areas covered by the macrophyte habitats also differed from the NBA highlighting the importance of updated mapping and ground truthing. Largely differing macrophyte health scores were produced when attributes were calculated using different combinations of macrophyte habitats. Results indicate that only macrophyte habitats and no other floodplain vegetation should be included when calculating abundance. All macrophyte habitats, physical habitats and floodplain should be incorporated when calculating community composition. The minimum of these attributes is used as the overall macrophyte health score as a precautionary approach is followed. Scoring of health is subjective and the only benchmark for determining the most appropriate method is comparion with previous RDM studies. This study illustrates the need for a standardised RDM scoring method that is presented in a manner that ensures the same results irregardless of the speciliast conducting the study. The updated estuary health and importance scores for WMA 11 are necessary to inform management, particularly as few of the estuaries receive formal protection. In conclusion, this study contributed to the limited knowledge of the estuaries of WMA 11 and assisted in determining appropriate methods for assessing the health and importance of estuary macrophytes.
- Full Text:
- Date Issued: 2015
Factors affecting the success of reseeding rehabilitation in the semi-arid Karoo, South Africa
- Authors: Matthee, Willem
- Date: 2015
- Subjects: Ecological disturbances -- South Africa -- Karoo , Arid regions -- South Africa -- Karoo , Environmental degradation -- South Africa -- Karoo
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/2889 , vital:20360
- Description: Due to overgrazing, mining and other anthropogenic disturbances, large sections of the Karoo region have been degraded, resulting in areas with low vegetation cover, where erosion rates are high and vegetation is dominated by unpalatable species. These areas have low and unpredictable rainfall, with slow to non-existent autogenic recovery, and this often forces landowners to implement reseeding rehabilitation in an attempt to increase both overall vegetation cover and the relative abundance of palatable plants. Landowners use soil preparation treatments, which include creating micro-catchments, ripping, mulching and brush packing, to supplement land rehabilitation. This study investigated the significance of initial rainfall, mean monthly rainfall, soil preparation techniques, slope, existing vegetation cover, litter, mulch and stone cover in determining the success of reseeding rehabilitation. Rainfall had the most significant influence, where long-lived shrubs established best under low initial rainfall and high mean monthly rainfall, and grasses established best after receiving high initial rainfall. Micro-catchments proved the most successful soil preparation technique for the establishment of long-lived shrubs, while ripping and mulching impacted negatively on grass establishment. A combination of mulch and micro-catchments aided Osteospermum sinuatum establishment in soils where soil shrinkage cracks occurred. Temperature influenced seed germination and drought tolerance of Lessertia annularis, Fingerhuthia africana and O. sinuatum, with higher germination success of O. sinuatum under temperatures simulating summer, and of F. africana under temperatures simulating winter. L. annularis germination had a faster growth rate and higher survival when germinated under autumn/spring temperatures. Landowners are advised to sow seeds of more than one species during rehabilitation, to include micro-catchments as soil preparation treatment, and to sow seeds during a time when rainfall is predicted to be high.
- Full Text:
- Date Issued: 2015
Formulation and process optimisation of ethionamide 250 MGtablets using quality by design principles
- Authors: Isaacs, Nasreen
- Date: 2015
- Subjects: Pharmaceutical chemistry , Drugs -- Design , Pharmaceutical technology
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/3979 , vital:20497
- Description: The traditional approach of Quality by Testing (QbT) limits the assurance of product quality to in-process and post-production testing. To overcome these limitations, a more proactive and systematic means to product development and optimisation is required. Quality by Design (QbD) is an example of such an approach which focuses on understanding the product and its manufacturing process and emphasises that quality should be built into the product and not merely tested. The study aims to optimise ethionamide tablets, an immediate release oral solid dosage form using QbD.
- Full Text:
- Date Issued: 2015
Generalizations of some fixed point theorems in banach and metric spaces
- Authors: Niyitegeka, Jean Marie Vianney
- Date: 2015
- Subjects: Fixed point theory , Banach spaces , Mappings (Mathematics)
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/5265 , vital:20828
- Description: A fixed point of a mapping is an element in the domain of the mapping that is mapped into itself by the mapping. The study of fixed points has been a field of interests to mathematicians since the discovery of the Banach contraction theorem, i.e. if is a complete metric space and is a contraction mapping (i.e. there exists such that for all ), then has a unique fixed point. The Banach contraction theorem has found many applications in pure and applied mathematics. Due to fixed point theory being a mixture of analysis, geometry, algebra and topology, its applications to other fields such as physics, economics, game theory, chemistry, engineering and many others has become vital. The theory is nowadays a very active field of research in which many new theorems are published, some of them applied and many others generalized. Motivated by all of this, we give an exposition of some generalizations of fixed point theorems in metric fixed point theory, which is a branch of fixed point theory about results of fixed points of mappings between metric spaces, where certain properties of the mappings involved need not be preserved under equivalent metrics. For instance, the contractive property of mappings between metric spaces need not be preserved under equivalent metrics. Since metric fixed point theory is wide, we limit ourselves to fixed point theorems for self and non-self-mappings on Banach and metric spaces. We also take a look at some open problems on this topic of study. At the end of the dissertation, we suggest our own problems for future research.
- Full Text:
- Date Issued: 2015
Green procurement for municipal construction projects
- Authors: Maboza, Luthando Sithembele
- Date: 2015
- Subjects: Sustainable construction , Construction industry -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/3165 , vital:20407
- Description: The study is a qualitative investigation of the implementation of green procurement in the construction sector at Local Government level. The focus is on the Metropolitan Municipalities of EThekwini, Nelson Mandela Bay and City of Cape Town. For the purpose of realising an extended comparative perspective, an additional three smaller municipalities were also reviewed. Green procurement is the tool used by governments to source the supply of products and services that are environmentally friendly to counter the global problem of climate change. The study commences with the exposition of the aspects of green procurement from the basis of the enabling legal framework to the scholarly contribution from which the study can be predicated. It becomes apparent from this review of legislation that there is a scope within the existing body of legislation for the use of green procurement as an environmental tool. Scholarly work addresses adoption of green procurement and considers, inter alia, the Bottom-up Approach, the Top-down Approach, and the Procura + Milestones model. Literature indicates that development has a negative impact on the environment, which includes vegetation loss, illegal dumping, and greenhouse gas emissions. Further, the literature recommends green lifecycle design and production of construction projects to reduce the impact of construction on the environment. A systematic investigation of municipalities by means of interviews with relevant municipal officials involved with the procurement of products and services, infrastructure services and environmental affairs officials made it possible to identify factors that impact on the implementation of green procurement. The investigation finds that the major obstacles to green procurement are socio-economic challenges that confront municipalities, lack of policy, and lack of awareness. Recommendations include the proposal of initiatives that encourage and improve the implementation of green procurement. The study hopes to inspire innovation in the implementation of green procurement in the construction sector.
- Full Text:
- Date Issued: 2015
In vivo and In vitro investigations to elucidate the associations of B-N-methylamino-L-alanine with proteins
- Authors: Van Onselen, Rianita
- Date: 2015
- Subjects: Cyanobacteria , Bioaccumulation
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/4923 , vital:20767
- Description: The cyanobacterially synthesized non-canonical amino acid β-N-methylamino-ʟ-alanine (BMAA) has been proposed to be a causative agent in the development of sporadic neurodegenerative diseases. This neurotoxin bioaccumulates and biomagnifies with increasing trophic levels in ecosystems by associating with proteins. It has been suggested that these associations with host proteins also serve as a reservoir from where BMAA is slowly released with normal protein catabolism, resulting in a continuous low level exposure. However, the nature of these associations remains poorly defined. The widely accepted hypothesis regarding the nature of these associations is that BMAA associates with proteins through primary incorporation into proteins with specific replacement of serine. In addition to excitotoxicity, BMAA misincorporation has been proposed as a potential mechanism of toxicity because of its link to protein tangle diseases. Interactions between BMAA and proteins that are not the result of misincorporation, have also been observed. However, the nature of these non-primary associations has not been investigated. This study focussed on establishing whether BMAA is misincorporated into host proteins with consequent toxicity, and on elucidating the nature of the BMAA-protein associations not linked to primary incorporation. In comparative studies between BMAA and canavanine, an arginine analogue known to misincorporate, exposure to BMAA did not result in any toxicity in prokaryotes or in an undifferentiated eukaryotic mammalian cell line, in contrast to what was observed upon canavanine exposure. Differentiation of the cell line with nerve growth factor to express glutamate receptors resulted in marked toxicity upon BMAA exposure, highlighting excitoxicity as the main mechanism of BMAA toxicity. Furthermore, it was demonstrated that BMAA interacts with free amino acids and proteins in the absence of de novo protein synthesis, causing enzyme inhibition and protein misfolding. It was concluded that BMAA does not interact with proteins through primary incorporation and that the observed associations are the result of an interaction between BMAA and amino acid side chains to form covalent bonds.
- Full Text:
- Date Issued: 2015
Long term effects of temperature and humidity on lignocellulosic fibres and composites
- Authors: Molaba, Tshepiso Princess
- Date: 2015
- Subjects: Lignocellulose Fibrous composites Textile fabrics
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/10276 , vital:26648
- Description: The study deals with the chemical and flame retardant (FR) treatment of woven flax fabric and preparation and characterization of flax reinforced phenolic composites. Sheets of flax fabric were subjected to chemical treatments using NaOH and silane coupling agents. A phosphate-based flame retardant (DAP) was applied to decrease the flammability of the flax fabric. The effect of the chemical treatments and FR treatments on the thermal and flammability properties of the fabric and composites was investigated using thermogravimetric analysis (TGA), vertical flame resistance test and cone calorimeter. The mechanical properties of the flax fabric and composites, before and after environmental ageing, were investigated. Ageing studies were carried out by exposing the samples in an environmental chamber at specified conditions for two weeks. TGA results showed that the treatment of the fabric with FR shifts the decomposition temperature to lower level and increases the char residue. Vertical flame resistance testing showed that FR treatment of the flax fabric improved the flammability properties. There was no after flame and afterglow observed for FR treated flax fabric due to self-extinguishment after removal of the flame. Flax Fabric without FR burned completely and there was no result for the char length due to the complete destruction of the fabric. The FR treatment, however, seemed to have had a negative effect on the tensile strength of the flax fabric. This was further intensified upon exposure of FR treated flax fabric to high temperatures during ageing studies which drastically reduced the tensile strength by more than 90%, and the flax fabric were found to be brittle and darker in visual appearance. TGA results of flax/phenolic composites showed that for composites containing chemically treated and FR treated flax fabric the decomposition temperatures shifted to lower temperatures; however there was no significant difference in the amount of char residue. Untreated flax/phenolic composites exhibited the lowest char residue. Cone calorimeter results showed that the peak heat release rate (PHRR), smoke production rate (SPR) and carbon dioxide (CO2) emission rate was reduced for the flax/phenolic composite produced using FR treated flax fabric. The tensile strength of these composites was reduced while there was an increase in modulus value. Exposure of the FR treated composites to high temperatures further reduced the tensile strength and increased the E-modulus. Both FR treated and untreated composites changed in colour and the FR treated composites were found to be brittle after exposure to high temperatures.
- Full Text:
- Date Issued: 2015
On the characterisation of photovoltaic device parameters using light beam induced current measurements
- Authors: Bezuidenhout, Lucian John-Ross
- Date: 2015
- Subjects: Solar cells--Materials , Semiconductors
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10551 , http://hdl.handle.net/10948/d1020282
- Description: Light Beam Induced Current (LBIC) measurement is a non-destructive technique used to perform localized characterization of solar cells using a light beam as a probe. The technique allows the determination of local photo response of a cell, the electrical parameters and defects that occur in the individual solar cell. The semiconductor materials used to create solar cells are not always defect free and these defects reduce the electrical performance of the device. It is therefore important to use a system that will allow the characterization and extract the solar cell parameters as can be done using the LBIC system. By analysing these parameters and cell defects, further studies can be done to enhance the cell’s lifetime and hence its efficiency. Light beam induced current (LBIC) is a technique that focuses light onto a solar cell device and thus creating a photo-generated current that can be measured in the external circuit for analyses. By scanning this beam probe across a solar cell while measuring the current-voltage characteristics, a map of various parameters can be obtained. This thesis presents the design of the LBIC system, the software interfacing of the data acquisition system and local photo-response within different solar cell technologies. In addition, this thesis represent two curve fitting algorithms namely: the Gradient Descent Optimisation and the Differential Evolution used for the extraction of solar cell device parameters. The algorithms are based on the one-diode solar cell model and make use of the light generated current-voltage (I-V) data obtained from the LBIC system. Different solar cell technologies namely; single crystalline (c-Si) and multicrystalline silicon (mc-Si) was used for analysis. LBIC maps and I-V characteristics of both technologies was obtained. The LBIC maps shows performance degrading defects present in the bulk and the surface of the solar cells as a function of spatial distribution. These localised defects acts as trapping mechanism for the charge carriers and therefore limits recombination within the solar cell and thus decreasing the performance of the solar cell device. The resulting I-V characteristics obtained from the LBIC system were used to determine the performance parameters using the two algorithms. The resultant effect of these parameters on the performance of the solar cells was observed. The overall results showed that LBIC is a useful tool for identifying and characterising defects in solar cells.
- Full Text:
- Date Issued: 2015
Perspectives of stakeholders on engagement around benefits and use of the Wilderness and Swartvlei lakes
- Authors: Roos, Aneri
- Date: 2015
- Subjects: Lake ecology -- South Africa , Environmental management
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/6588 , vital:21121
- Description: The objective of this research was to determine how stakeholder engagement impacts on the use and sharing of ecosystem service benefits derived from large lake systems. The Wilderness and Swartvlei lake systems, which form an integral part of the Wilderness Section of the Garden Route National Park (GRNP), were chosen as the study area. The park is juxtaposed with urban and other land uses making it one of the most integrated urban conservation areas in South Africa. The park is an open-access park with only enclosed areas being the camping and chalet areas that borders onto the Touw River Estuary. A major contribution of this research was that it classified stakeholder groups into ten meta-identities (associations, businesses, charity organisations, conservancies, government departments, informal groupings, learning/educational institutions, multiple stakeholder projects, spiritual groupings and sports clubs) and that through an iterative research approach it stimulated dialogue between individuals across the various meta-identities. Engagement is a way of allowing stakeholders to develop a sense of ownership through the decision-making process. This could also lead to a higher level of trust and cooperation. The main insights drawn from this research were that, history is important; engagement is characterised by an on-going blame-game (at least in part as a result of this particular history); meta-identities share some values, but differ in how they see the world; there is a concern over social issues (widespread concern, but few mechanisms to address the issue); management agencies are stewards of the feedbacks between social and ecological systems (responsible for regulating flows of benefits), but in open-access systems cannot do so on their own; all meta-identities are keen to contribute and this can, with appropriate facilitation, be harnessed towards collective action. Stakeholders associated with all ten meta-identities identified provisioning and cultural services as a benefit derived from the lakes. No regulating or supporting services were identified as benefits. This could indicate a gap in awareness of the importance of these services. A category that emerged from this study is the importance of employment opportunities linked to the management of natural resources. The study showed that engagement does not occur around the benefits that can be derived from the lakes, but rather around the issues that have a direct or indirect influence on the ecosystem services and therefore the suite of benefits that would be available for sharing. The issues could be divided into two broad themes; social issues and developmental pressures. The social issues pose an indirect threat to the lakes while the developmental pressures pose a direct threat. As the mandates across agencies differ, with the municipalities concerned with the social issues and SANParks with the pressures, the importance of communication and cooperative governance was highlighted.
- Full Text:
- Date Issued: 2015
Present state of macrophytes and responses to management scenarios at the St. Lucia and Mfolozi estuaries
- Authors: Rautenbach, Kelly
- Date: 2015
- Subjects: Aquatic plants -- South Africa , Estuaries -- South Africa , Marine plants -- Ecology -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/3195 , vital:20410
- Description: The St. Lucia Estuary, the largest estuary in South Africa, has been subject to many natural (a decade long drought) and anthropogenic impacts. A particular mouth manipulation activity, the artificial separation of the Mfolozi River and the St Lucia Estuary in 1952, was done to stop the perceived “silting up” of the estuary, but resulted in a decrease in freshwater supply. The changes in inflows (both fresh and marine) are controlled by management decisions and affect other system parameters such as salinity, water level and turbidity, which influence the distribution of biota. Therefore knowledge on the physico-chemical environment and eco-physiological tolerances of macrophytes will lead to informed future management decisions. The first of the three objectives carried out for this study determined the present state and distribution of the macrophytes of the St. Lucia and Mfolozi estuaries. The macrophyte habitats mapped in 2008 and 2013 were the submerged macrophytes, reeds and sedges, mangroves, grass and shrubs, salt marsh (succulent) and swamp forest. Results indicated that low salinity in the lakes and high water level in 2013 caused die-back or expansion of particular habitats. Submerged macrophytes, in particular Stuckenia pectinata, grows well in water with salinity <15 ppt, therefore this habitat increased by 412 ha (96%) in cover since 2008. Salt marsh decreased by 553 ha (57%) due to inundation. Since 2008 the reeds and sedges increased by 390 ha (in North Lake and the Narrows) due to the salinity decrease. In the Narrows the mangroves decreased by 28 ha (9%) in area cover. This was due to the drought that persisted for so many years, which caused low water levels and non-tidal conditions. The second objective was to determine the present state / health of the mangroves at four sites along the Narrows by assessing sediment condition and population structure of the trees. These results were compared to those obtained in 2010. The total density of Avicennia marina increased since 2010, however this was due to the large increase in seedlings at Site 1, the back channel site. The highest sediment salinity (26 ppt) and porewater salinity (29 ppt) was recorded for this site and these results show that this back channel site was strongly influenced by the open Mfolozi Estuary (increase in marine waters) and tidal conditions at the time of sampling in 2013. The total density of Bruguiera gymnorrhiza decreased, but an increase in adults was recorded at Site 2, the freshwater site. The soil collected from the Bruguiera quadrats was fresher and drier than that of the Avicennia quadrats of Site 2. Lack of seedlings (of both species) was due to the dense stands of Acrostichum aureum (mangrove fern) and Phragmites australis (common reed) and a thick, impenetrable mat of Avicennia pneumatophores. At Sites 3 and 4, the drier sites (where sediment moisture contents were the lowest for all sites at 43 and 42% respectively), seedling and sapling density was low, but adults increased in density since 2010. Recruitment and survival were impacted by the harsh environmental conditions that prevailed prior to 2013 (low water level and non-tidal influence), but adults survived. The results of the test that determined the percentage of aerenchyma of the pneumatophores indicated that waterlogging stress did not affect the aerenchyma of the pneumatophores. However the period of inundation was probably not significant enough to have affected the production of aerenchyma. The third objective formed part of an ongoing study by the Global Environmental Facility (GEF) on the feasibility of linking the Mfolozi River back to the St Lucia Estuary and the responses of these systems to different management scenarios: 1) the “do nothing” scenario; 2) maintain separate Mfolozi and St Lucia mouths representing an open mouth condition; and 3) actively facilitate a single mouth (therefore linking the Mfolozi and St Lucia mouths). Data gathered on the eco-physiological tolerances of the dominant macrophyte species was used to predict the response of the different habitats to these various management scenarios and the results indicated that the best management scenario would be to actively facilitate a single mouth (Scenario 3) as the estuary habitats would increase significantly because of preferred tidal and saline conditions, as this would represent more natural conditions. The results of the study will provide input to recommendations for future “adaptive management” strategies for the Global Environmental Facility (GEF) Project.
- Full Text:
- Date Issued: 2015
Sedimentological and geochemical investigations on borehole cores of the Lower Ecca Group black shales, for their gas potential : Karoo basin, South Africa
- Authors: Chere, Naledi
- Date: 2015
- Subjects: Sediments (Geology) -- South Africa , Gas reservoirs -- South Africa , Natural gas reserves -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10679 , http://hdl.handle.net/10948/d1021201
- Description: In the recent years, the shale gas discourse has become central to discussions about future energy supply in South Africa. In particular, the Permian black shales of the Lower Ecca Group formations in the Karoo Basin are considered potential source rocks for shale gas. The research presented in this thesis advances the understanding of the shale gas potential of mainly the Prince Albert, Whitehill and Tierberg/Collingham Formations. These shale sequences were sampled from eight deep boreholes spread across the main Karoo Basin and geochemically analysed at the GFZ - Helmholtz Centre Potsdam, Germany. Three key questions guided the study, these are: (i) what is the lithology of the sequence; (ii) where in the basin do the shale sequences attain maximum thickness at optimum depth i.e. beneath 1000-1500m; and (iii) and their shale characteristics. To evaluate these, borehole core logging, petrology and organic geochemistry were used extensively. Petrology involved the use of thin section, scanned electron and transmission electron microscopy for mineralogy as well as the identification of sedimentary features, organic matter and nano-scale porosity. These were coupled with standard organic geochemistry techniques such as Rock Eval. analysis, open pyrolysis gas chromatography and thermovaporisation to quantify the free gas, total organic carbon (TOC), present-day gas generative potential and kerogen type. The results show that the Whitehill Formation, away from the CFB and not intruded by dolerite, has the most potential for shale gas. Microscopic studies of this pyritic black shale reveal the occurrence of porous amorphous matter, indicating thermal maturity within the gas generation zone (i.e. > 1.1 percent Ro, 120ºC). The TOC content is consistently high within the Whitehill (exceeding industry requirement of 2 percent), attaining maximum of 7.3 percent. The highest yields of free and desorbed gas, especially methane, were emitted within this formation (S1 and nC1 peaks); mostly within its dolomitic units. In addition, dissolution porosity within dolomite units of the Whitehill Formation was identified as the predominant type of porosity. Thus, it is deduced that the dolomitic units of Whitehill Formation potentially contain the greatest volumes of free gas. HI values attain maximum of 25 mg HC/g TOC, whereas the OI values 26 mg CO2/g TOC. Such low HI and OI values are typically attributed to the dominance of Type IV kerogen, and consistent with overmaturity. Open pyrolysis (GC) show the main the chemical compound of the organic matter to be m-p-xylene, consistent with a mix of Type III, Type I/II and Type IV kerogen. Lithologically, the Whitehill Formation is composed of ~ 35 quartz, 13 percent feldspar, 26 percent illite and ~ 23 percent dolomite with variable amounts of pyrite. The dominance of quartz is directly proportional to the brittleness of the rock. Thus it can be deduced that the Whitehill Formation is relatively brittle and therefore fraccable. Burial trends indicate increasing depth (from ground level) to the top of the Whitehill Formation towards the south and south-eastern portion of the basin. It is in the southern region where thicknesses of this black shale exceeding 50m occur at depths more than 1500m; 1000m beneath fresh water aquifers. It therefore concluded that Whitehill Formation in the southern portion of Karoo Basin, but away from the thermo-tectonic overprint of the Cape Orogeny, is the most probable shale gas reservoir in South Africa.
- Full Text:
- Date Issued: 2015
Spatial and temporal variability in water quality characteristics of the Swartkops Estuary
- Authors: Pretorius, Liaan Marié
- Date: 2015
- Subjects: Estuarine ecology -- South Africa -- Eastern Cape , Hydrology -- South Africa -- Eastern Cape , Water quality -- South Africa -- Swarkops River Estuary
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/4176 , vital:20563
- Description: Water quality characteristics of the heavily urbanised and industrialised Swartkops River catchment in the Eastern Cape has been the focus of several studies since the 1970s. Overloaded and poorly maintained wastewater treatment works (WWTW), polluted stormwater runoff and solid waste have had a negative impact on the water quality status of the Swartkops River and estuary. Past studies have revealed that a distinct relationship exists between land use activities and the water quality of the Swartkops Estuary, which in turn has raised concerns pertaining to the ecological, economic, recreational, and cultural value of the estuaryThe Swartkops Estuary has a Present Ecological State (PES) of Category D(1) and a Recommended Ecological Category (REC)(2) of a C (Van Niekerk et al., 2014). It is known that effective management of anthropogenic impacts on coastal systems requires a thorough understanding of the system’s biological responses to wastewater discharges and to hydrologic changes. For this reason, the objective of this study was to determine the current water quality status of the Swartkops Estuary, and to gain greater insight into factors controlling eutrophication. This was important as outdated water quality information was used in the Swartkops Integrated Environmental Management Plan (Enviro-Fish Africa, 2011) due to a lack of current data. To determine the current water quality status of the Swartkops Estuary the present study investigated spatial and temporal variability in physico-chemical parameters, nutrients, phytoplankton biomass and community composition, faecal bacteria, and “where possible” related this to historical water quality data. In general, points of entry into the estuary were investigated for their impact on nutrient enrichment and the bacteriological status of the estuary. Water quality surveys were completed in September 2012, November 2012, February 2013, May 2013 and August 2013The present study found evidence to suggest that water is not flushed as efficiently from the estuary as was previously the case, and that the natural hydrology of the estuary has been modified. These changes appear to be the effect of large volumes of wastewater discharges from the wastewater treatment works (WWTW), which has led to the additional stresses of increased vertical stratification and reduced vertical mixing. A build-up of dissolved inorganic nutrients has given rise to persistent eutrophic conditions and phytoplankton blooms occurring from the middle reaches to the tidal limit of the estuary. These findings were associated with a generally well oxygenated estuary; however, bottom water hypoxic conditions were recorded in the upper reaches of the estuary on two occasions and were generally associated with bloom.forming flagellates. Elevated concentrations of inorganic nutrients stimulated phytoplankton to attain high biomass ranging from 0 to 248 g l-1 (31.8 6.56 g l-1). All nutrients displayed positive linear gradients from the mouth to the tidal limit, showed significant (p < 0.05) temporal and spatial variability, and were significantly (p < 0.05) correlated with phytoplankton biomass. Phytoplankton blooms (> 10 000 cells ml-1) of several different groups were recorded from the middle reaches of the estuary to the tidal limit. Diatoms were the dominant group during increased freshwater inflow (at mean daily flow rate of 2.14 m3 s-1) and low DIP levels, whereas flagellates were generally the dominant group during reduced flow and under higher nutrient levels. Although the different tidal stages had no effect on phytoplankton biomass per se, it did support co-existance between phytoplankton groups. This was noted during the spring ebb tide in September 2012 (i.e. flagellates, diatoms and dinoflagellate) and in February 2013 (i.e. dinoflagellates, diatoms and chlorophytes). Phytoplankton blooms have become persistent in the middle to upper reaches of the estuary where chlorophyll-a was > 20 µg l-1 and cell density exceeded 10 000 cells ml-1; a situation not reported in previous studies. The Motherwell Canal was and still is the main source of nitrogen (generally in the form of ammonium) to the estuary, whereas the Swartkops River is still the primary source of phosphorus to the estuary. Since the stormwater canal services the large residential area of Motherwell where leaks in the sewer system, the dumping of night soil buckets, and faulty pumps are often reported, polluted discharges from the Motherwell Canal can enter the canal at any given point. In contrast to the canal, DIP loading from the Swartkops River to the estuary generally occurred under conditions of low flow, whereas nitrogen showed no apparent relationship. Faecal bacteria originating from the Motherwell Canal had the most profound effect on the bacteriological status in the middle reaches of the estuary, whereas the Swartkops River had an intermediate effect due to bacteria die-offs occurring between the point of release from the WWTW to the riverine reaches and the tidal limit of the estuary. Nevertheless, Escherichia coli and enterococci levels are still high, especially in the summer months rendering the estuary unsafe for recreation during this season. Historical data on trace metals in the water column were limited and thus observations from the present study could not be concluded with much confidence. However, preliminary data suggest that levels of copper, zinc, iron and cadmium have increased by at least 90% in the estuary, at the tidal limit of the estuary and in the Markman and Motherwell canals. High inputs of nutrients, trace metals and faecal bacteria to the estuary from land-use activities indicate the necessity for remedial actions with the main objective being to conserve and protect the estuary’s recreational, ecological and economic functions.
- Full Text:
- Date Issued: 2015
Stratigraphic characterisation of the Collingham formation in the context of shale gas from a borehole (SFT 2) near Jansenville, Eastern Cape, South Africa
- Authors: Black, Dawn Ebony
- Date: 2015
- Subjects: Geology, Stratigraphic , Formations (Geology) -- South Africa , Collingham formation
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10676 , http://hdl.handle.net/10948/d1021148
- Description: This study is an extensive lithological, petrographical, mineralogical and geochemical description of fresh Collingham Formation core samples collected from borehole SFT 2, located on the farm Slangfontein, south of Jansenville in the Eastern Cape, South Africa. The borehole, drilled to 295 m on the northerly limb of a shallow westerly plunging syncline, intersected the lower Ecca Group rocks of the Ripon, Collingham, Whitehill and Prince Albert Formations and terminated in the upper Dwyka Group. A comprehensive log and stratigraphic column were compiled for the Collingham Formation and fresh core samples were analysed using X-Ray Diffraction (“XRD”), X-Ray Fluorescence (“XRF”), mercury porosimetry, and Total Organic Carbon (“TOC”). Thin section microscopy and Scanning Electron Microscopy (“SEM”) analyses were carried out on selected samples of core from borehole SFT 2. The matrix supported, massive to laminated lithological units of the Collingham Formation are interpreted as detrital, terrigenous sediments. These sediments are composed of intercalated fine-grained, poorly sorted, non-fissile mudstone; fine- to very fine-grained, predominantly pyroclastic airfall tephra; and less common fine-grained sandstones. Sediments of the Collingham Formation are considered to be immature, composed primarily of clay and aluminosilicates. The predominance of a clay fraction and aluminosilicates in mudstone samples is indicated by elevated K2O/Al2O3 ratio values, and the relationship of Zr, Al2O3 and TiO2. The presence of glauconite within the Collingham Formation indicates deposition in a mildly alkaline, slightly reducing marine environment. Rb/K ratio values (1.9 – 2.3 x 10-3) indicate brackish to slightly marine conditions, while low Zr/Rb ratio values indicate a low hydro-energy environment, with stable bottom water conditions. Hf and Nb concentrations indicate that detrital input was greatest during the deposition of tuffaceous units; while stable mineral assemblages and a low Fe2O3/K2O ratio values indicate deposition close to the source. A variation in Si/Ca values indicate times when sediments were affected by turbidity, interspersed with times of relative quiescence. The predominance of K2O over Na2O indicates that the Collingham Formation is alkali-rich, while SiO2/Al2O3 ratio values and the relationship of Zr, Al2O3 and TiO2 indicate that sediments are immature. In the lower portion of the formation, non-sulphidic, anoxic conditions are indicated by Mn/Al, V/(V+Ni), V/Cr ratio values, the Fe-Mn- V content, and the correlation between V and TOC. The upper portion of the formation is considered dysoxic, due to the presence and distribution of pyrite framboids, which indicate a fluctuating O2 level, likely indicating deposition at the interface between anoxic and slightly more oxic conditions. V/Cr ratio values indicate that the O2 regime was lowest during the deposition of the mudstones. The Chemical Index of Alteration (“CIA”) indicates a consistent weathering regime throughout the deposition of the Collingham Formation, associated with a temperate climate on the interface between glacial and tropical conditions. Although an anoxic and low hydro-energy environment is generally favourable for hydrocarbon accumulation, the Collingham Formation contains low levels of Total Organic Carbon (well below 0.9 per cent) and low porosities (ranging from 0.35 per cent to a maximum of 2.22 per cent), both of which are characteristic of a poor source for gas accumulation. Due to the laminate nature, permeability and fracturability of the Collingham Formation, there is the potential that the formation may form a good sealing sequence to the potentially gas-rich Whitehill Formation below. The metamorphic impact related to the Cape Orogeny (± 250 Ma), and reflected in the textures of the minerals making up the sediments of the Collingham Formation, suggests the enhancement in the sealing efficiency of this formation.
- Full Text:
- Date Issued: 2015