Causes and effects of non-payment of residential property rates in Mahikeng
- Authors: Asianoah, Rexford Kofi
- Date: 2014
- Subjects: Debts, Public -- South Africa -- Mahikeng , Municipal default -- South Africa -- Mahikeng , Public utilities -- South Africa -- Mahikeng , Collecting of accounts -- South Africa -- Mahikeng
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:9674 , http://hdl.handle.net/10948/d1020076
- Description: One of the major sources of income to South African Municipalities is property rates. Income generated from property rates is meant to develop and deliver services to residents living in the said Municipal area. The main aim of the research was to identify the causes and effects of the non-payment of residential property rates, and also to develop workable strategies to maximise the collection of residential property rates in order to ensure developmental growth sustenance, specifically in Mahikeng Municipal area. Related literature was reviewed on the non-financial viability of Municipalities, maintenance of public infrastructure, service delivery and Municipal development plans in establishing the relationship with non-payment of residential property rates. Four hypotheses were set to guide the research with two testing positive with high level of confidence using the chi square method of testing. The research methodology employed in the research was mainly quantitative where the results and findings obtained from the questionnaire were statistically analysed. The research revealed that: The Mahikeng Local Municipality has failed to find the right medium to send rates bills to clients on time, is not taking active responsibility to recover rates debts, does not provide quality service delivery and the reluctance by locals to pay their property rates. The effects thereof, are the inability of the Municipality to deliver effective and efficient services, lack of maintenance of public infrastructure and development in the area. By implementing various options such as email, sms and the post to send rates bills to property owners, by employing different payment options, for example debit orders, transfers, bank deposits and discounts for property owners and embarking on periodic public awareness campaigns in educating the community regarding the importance of payment of property rates could serve as effective mechanisms to address the non-payment of residential property rates faced by the Mahikeng Local Municipality.
- Full Text:
- Date Issued: 2014
- Authors: Asianoah, Rexford Kofi
- Date: 2014
- Subjects: Debts, Public -- South Africa -- Mahikeng , Municipal default -- South Africa -- Mahikeng , Public utilities -- South Africa -- Mahikeng , Collecting of accounts -- South Africa -- Mahikeng
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:9674 , http://hdl.handle.net/10948/d1020076
- Description: One of the major sources of income to South African Municipalities is property rates. Income generated from property rates is meant to develop and deliver services to residents living in the said Municipal area. The main aim of the research was to identify the causes and effects of the non-payment of residential property rates, and also to develop workable strategies to maximise the collection of residential property rates in order to ensure developmental growth sustenance, specifically in Mahikeng Municipal area. Related literature was reviewed on the non-financial viability of Municipalities, maintenance of public infrastructure, service delivery and Municipal development plans in establishing the relationship with non-payment of residential property rates. Four hypotheses were set to guide the research with two testing positive with high level of confidence using the chi square method of testing. The research methodology employed in the research was mainly quantitative where the results and findings obtained from the questionnaire were statistically analysed. The research revealed that: The Mahikeng Local Municipality has failed to find the right medium to send rates bills to clients on time, is not taking active responsibility to recover rates debts, does not provide quality service delivery and the reluctance by locals to pay their property rates. The effects thereof, are the inability of the Municipality to deliver effective and efficient services, lack of maintenance of public infrastructure and development in the area. By implementing various options such as email, sms and the post to send rates bills to property owners, by employing different payment options, for example debit orders, transfers, bank deposits and discounts for property owners and embarking on periodic public awareness campaigns in educating the community regarding the importance of payment of property rates could serve as effective mechanisms to address the non-payment of residential property rates faced by the Mahikeng Local Municipality.
- Full Text:
- Date Issued: 2014
Characterization of animal fibres
- Authors: Notayi, Mzwamadoda
- Date: 2014
- Subjects: Animal fibres , Textile fabrics , Animal science
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10552 , http://hdl.handle.net/10948/d1020426
- Description: Identification of fibres, particularly in blends, requires knowledge of their characteristics. Individual Identifying features between wool and mohair fibres were investigated in this study using a Scanning Electron Microscope (SEM), Fourier Transform Infrared-Attenuated Total Reflection (FTIR-ATR), Fourier Transform Raman and Atomic Force Microscope (AFM). This study confirmed that wool and mohair can be differentiated and identified in blends using the cuticle scale height (CSH) criterion, wool having an average CSH of 0.6 ± 0.1 μm and mohair having an average CSH of 0.4 ± 0.1 μm. The AFM provided highly reproducible CSH results, which also confirmed the SEM results that indeed wool and mohair could be differentiated using the CSH as criterion. The AFM gave a CSH value of 0.9 ± 0.2 μm for wool and 0.6 ± 0.2 μm for mohair, the difference between the two results being statistically significant according to the student t-test. It has been demonstrated that wool and mohair identification in blends is possible, by using the AFM to measure CSH, although the method is very time consuming and might be expensive. The FTIR-ATR showed similar spectra for wool and mohair fibres, confirming that the two fibre types consist of the same polymer material. Nevertheless, a difference was observed in the ratios of the relative intensities of the amide I (around 1630 cm-1) to the amide II (around 1515cm-1) absorption bands. The FT Raman provided similar spectra for the wool and mohair fibres, although a possible distinguishing feature between the two fibres could be the intensities of the alkyl side chains chemical band near 2940 cm-1 in the spectra of the two fibre types. According to the results obtained in this study, the FTIR-ATR and the FT Raman techniques may have potential for differentiating between wool and mohair but this requires further investigation.
- Full Text:
- Date Issued: 2014
- Authors: Notayi, Mzwamadoda
- Date: 2014
- Subjects: Animal fibres , Textile fabrics , Animal science
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10552 , http://hdl.handle.net/10948/d1020426
- Description: Identification of fibres, particularly in blends, requires knowledge of their characteristics. Individual Identifying features between wool and mohair fibres were investigated in this study using a Scanning Electron Microscope (SEM), Fourier Transform Infrared-Attenuated Total Reflection (FTIR-ATR), Fourier Transform Raman and Atomic Force Microscope (AFM). This study confirmed that wool and mohair can be differentiated and identified in blends using the cuticle scale height (CSH) criterion, wool having an average CSH of 0.6 ± 0.1 μm and mohair having an average CSH of 0.4 ± 0.1 μm. The AFM provided highly reproducible CSH results, which also confirmed the SEM results that indeed wool and mohair could be differentiated using the CSH as criterion. The AFM gave a CSH value of 0.9 ± 0.2 μm for wool and 0.6 ± 0.2 μm for mohair, the difference between the two results being statistically significant according to the student t-test. It has been demonstrated that wool and mohair identification in blends is possible, by using the AFM to measure CSH, although the method is very time consuming and might be expensive. The FTIR-ATR showed similar spectra for wool and mohair fibres, confirming that the two fibre types consist of the same polymer material. Nevertheless, a difference was observed in the ratios of the relative intensities of the amide I (around 1630 cm-1) to the amide II (around 1515cm-1) absorption bands. The FT Raman provided similar spectra for the wool and mohair fibres, although a possible distinguishing feature between the two fibres could be the intensities of the alkyl side chains chemical band near 2940 cm-1 in the spectra of the two fibre types. According to the results obtained in this study, the FTIR-ATR and the FT Raman techniques may have potential for differentiating between wool and mohair but this requires further investigation.
- Full Text:
- Date Issued: 2014
Characterization of chromatic dispersion in single mode fibre
- Authors: Wassin, Shukree
- Date: 2014
- Subjects: Fiber optics Electromagnetic waves , Electromagnetic waves -- Transmission
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/47807 , vital:40379
- Description: In this dissertation, an investigation of chromatic dispersion is presented. The Pulse delay and phase Shift chromatic dispersion characterization techniques were used for conducting the measurements. The experiments were performed in a modern optical fibre research laboratory and chromatic dispersion measurements were carried out on several lengths of G.652 and G.655 single mode fibres. The pulse delay characterization technique measures the time of flight between two modulated optical signals whilst propagating along the fibre under test. During phase shift experiments, the group delay is obtained by measuring the relative phase difference as a function of wavelength, between adjacent sinusoidal light signals. The pulse delay and phase shift characterization techniques illustrated excellent agreement in the measured! chromatic Dispersion coefficients along the G.652 standard single mode! fibre as well as the G.655 positive and negative non-zero dispersion shifted fibre. It was found that the measurement accuracy improved as the fibre length increased. A periodic shift between the modulated optical signals, propagating along the fibre was experimentally observed. It is to be remarked that the longer wavelength signals propagated faster along the G.655 positive non-zero dispersion shifted fibre in comparison to its transmission within the G.655 negative non-zero dispersion shifted fibre. Furthermore, it was found that the sinusoidal signal shifted towards the left along the G.655 negative NZDSF fibre whilst the shift occurred towards the right along the G.655 positive NZDSF fibre. Generally, the shift arising along the G.655 fibres was found to be smaller than the shift seen throughout the G.652 fibres. Towards the end of this study, a chromatic dispersion compensation system was designed and tested. Once characterization of the compensation link was completed, it was experimentally illustrated that the chromatic dispersion across the system was successfully reduced. Finally, a sum of squares of error statistical test showed that the phase shift technique is more accurate in comparison to the pulse delay method. This result was found to be in good agreement with published work found in literature.
- Full Text:
- Date Issued: 2014
- Authors: Wassin, Shukree
- Date: 2014
- Subjects: Fiber optics Electromagnetic waves , Electromagnetic waves -- Transmission
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/47807 , vital:40379
- Description: In this dissertation, an investigation of chromatic dispersion is presented. The Pulse delay and phase Shift chromatic dispersion characterization techniques were used for conducting the measurements. The experiments were performed in a modern optical fibre research laboratory and chromatic dispersion measurements were carried out on several lengths of G.652 and G.655 single mode fibres. The pulse delay characterization technique measures the time of flight between two modulated optical signals whilst propagating along the fibre under test. During phase shift experiments, the group delay is obtained by measuring the relative phase difference as a function of wavelength, between adjacent sinusoidal light signals. The pulse delay and phase shift characterization techniques illustrated excellent agreement in the measured! chromatic Dispersion coefficients along the G.652 standard single mode! fibre as well as the G.655 positive and negative non-zero dispersion shifted fibre. It was found that the measurement accuracy improved as the fibre length increased. A periodic shift between the modulated optical signals, propagating along the fibre was experimentally observed. It is to be remarked that the longer wavelength signals propagated faster along the G.655 positive non-zero dispersion shifted fibre in comparison to its transmission within the G.655 negative non-zero dispersion shifted fibre. Furthermore, it was found that the sinusoidal signal shifted towards the left along the G.655 negative NZDSF fibre whilst the shift occurred towards the right along the G.655 positive NZDSF fibre. Generally, the shift arising along the G.655 fibres was found to be smaller than the shift seen throughout the G.652 fibres. Towards the end of this study, a chromatic dispersion compensation system was designed and tested. Once characterization of the compensation link was completed, it was experimentally illustrated that the chromatic dispersion across the system was successfully reduced. Finally, a sum of squares of error statistical test showed that the phase shift technique is more accurate in comparison to the pulse delay method. This result was found to be in good agreement with published work found in literature.
- Full Text:
- Date Issued: 2014
Contemporary use and seasonal abundance of indigenous edible plants (with an emphasis on geophytes) available to human foragers on the Cape south coast, South Africa
- Authors: De Vynck, Jan Carlo
- Date: 2014
- Subjects: Wild plants, Edible -- Africa, Southern , Coastal plants -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10638 , http://hdl.handle.net/10948/d1020044
- Description: Human subsistence within the Cape Floristic Region (Cape) dates back to our inception as a distinct species. Unique archaeological evidence found here for the defining attribute of cognitive modernity, as well as coinciding paleo-climatic challenges to survival, both highlight the Cape’s potential to support the existence of pre-historic hunter-gatherers. This habitat, with its unprecedented diversity of geophytes and other plant growth forms, has not yet revealed its potential to provide carbohydrate resources for early Homo sapiens sapiens. In order to investigate this potential, an ethnobotanical survey of the south Cape coastal area near Still Bay was conducted. Despite 17th Century colonialism marking the onset of indigenous plant knowledge decline, the 18 people of Khoe-San descent interviewed in this survey still actively used 58 indigenous edible plant species with a variety of 69 uses. Fruit showed the highest popularity of plants used (52 percent) followed by nectar, with plants having underground storage organs (USOs) ranking third (34 percent). Among growth forms, shrubs dominated (34 percent) followed by geophytes and trees (both 21 percent). With the exception of Prionium serratum, which was rare in the research area, this study failed to identify species that could have formed a staple source of carbohydrate for pre-colonial Khoe-San peoples of the Cape south coast. While eight species of USOs were identified (12 percent of total) only Cyphia species emerged as an important carbohydrate source. This study indicated the importance of Thicket Biome species as a source of edible plants. The second component of the study comprised a two year phenological survey of indigenous edible plant species in four primary vegetation types. A total of 32 USO species and 21 species with aboveground edible carbohydrates (fruiting species) were identified across all sites. Limestone Fynbos had the richest flora of edible species (21 USO species and 18 fruiting species), followed by Strandveld (15 USOs and 13 fruiting species), Renosterveld (8 and 8, respectively) and lastly Sand Fynbos (5 and 5, respectively). The season of highest apparency showed slight variation amongst the four sites over the two years, with more variation evident in the period of apparency. The first survey year had below average rainfall, while the second year received an average rainfall amount. The second year saw a dramatic increase in apparency of abundance for all sites (50 to 60 percent increase) except for the Sand Fynbos site, which showed little change. The other sites showed a one month increase in the period of apparency in the second survey year. Overall, late summer to autumn was the period of lowest apparency of USOs. The ripening of certain fruiting species during this time would have provided a source of carbohydrate when USO availability was at its lowest. Strandveld had the highest biomass in the peak of apparency (over 80 kgha-1) in the first year with a nearly 20 percent increase for the second year. The combined biomass for the four study sites in the first survey year was roughly 150 kgha-1 and 185 kgha-1 for the second year. The apparency of abundance (ripe and edible phase) of fruiting species did not increase much for Renosterveld and Strandveld in the second survey year, except for Limestone Fynbos (49 percent increase) and Sand Fynbos (53 percent). A multivariate analysis showed seven phenophases for high apparency of edible USOs and ripe fruit across the four vegetation types. Given the contribution of evergreen USOs and fruiting species, there would always have been carbohydrates available for foragers to collect in the major vegetation types of the south Cape coast. However, harvesting and processing this carbohydrate resource would have posed cognitive challenges for MSA hunter-gatherers, given the interwoven taxonomic complexity of numerous toxic plant species, and the diverse phenology of edible plant species within the varied vegetation types. These challenges were undoubtedly mastered, highlighting the Cape environment as a possible catalyst to improved human cognitive maturity.
- Full Text:
- Date Issued: 2014
- Authors: De Vynck, Jan Carlo
- Date: 2014
- Subjects: Wild plants, Edible -- Africa, Southern , Coastal plants -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10638 , http://hdl.handle.net/10948/d1020044
- Description: Human subsistence within the Cape Floristic Region (Cape) dates back to our inception as a distinct species. Unique archaeological evidence found here for the defining attribute of cognitive modernity, as well as coinciding paleo-climatic challenges to survival, both highlight the Cape’s potential to support the existence of pre-historic hunter-gatherers. This habitat, with its unprecedented diversity of geophytes and other plant growth forms, has not yet revealed its potential to provide carbohydrate resources for early Homo sapiens sapiens. In order to investigate this potential, an ethnobotanical survey of the south Cape coastal area near Still Bay was conducted. Despite 17th Century colonialism marking the onset of indigenous plant knowledge decline, the 18 people of Khoe-San descent interviewed in this survey still actively used 58 indigenous edible plant species with a variety of 69 uses. Fruit showed the highest popularity of plants used (52 percent) followed by nectar, with plants having underground storage organs (USOs) ranking third (34 percent). Among growth forms, shrubs dominated (34 percent) followed by geophytes and trees (both 21 percent). With the exception of Prionium serratum, which was rare in the research area, this study failed to identify species that could have formed a staple source of carbohydrate for pre-colonial Khoe-San peoples of the Cape south coast. While eight species of USOs were identified (12 percent of total) only Cyphia species emerged as an important carbohydrate source. This study indicated the importance of Thicket Biome species as a source of edible plants. The second component of the study comprised a two year phenological survey of indigenous edible plant species in four primary vegetation types. A total of 32 USO species and 21 species with aboveground edible carbohydrates (fruiting species) were identified across all sites. Limestone Fynbos had the richest flora of edible species (21 USO species and 18 fruiting species), followed by Strandveld (15 USOs and 13 fruiting species), Renosterveld (8 and 8, respectively) and lastly Sand Fynbos (5 and 5, respectively). The season of highest apparency showed slight variation amongst the four sites over the two years, with more variation evident in the period of apparency. The first survey year had below average rainfall, while the second year received an average rainfall amount. The second year saw a dramatic increase in apparency of abundance for all sites (50 to 60 percent increase) except for the Sand Fynbos site, which showed little change. The other sites showed a one month increase in the period of apparency in the second survey year. Overall, late summer to autumn was the period of lowest apparency of USOs. The ripening of certain fruiting species during this time would have provided a source of carbohydrate when USO availability was at its lowest. Strandveld had the highest biomass in the peak of apparency (over 80 kgha-1) in the first year with a nearly 20 percent increase for the second year. The combined biomass for the four study sites in the first survey year was roughly 150 kgha-1 and 185 kgha-1 for the second year. The apparency of abundance (ripe and edible phase) of fruiting species did not increase much for Renosterveld and Strandveld in the second survey year, except for Limestone Fynbos (49 percent increase) and Sand Fynbos (53 percent). A multivariate analysis showed seven phenophases for high apparency of edible USOs and ripe fruit across the four vegetation types. Given the contribution of evergreen USOs and fruiting species, there would always have been carbohydrates available for foragers to collect in the major vegetation types of the south Cape coast. However, harvesting and processing this carbohydrate resource would have posed cognitive challenges for MSA hunter-gatherers, given the interwoven taxonomic complexity of numerous toxic plant species, and the diverse phenology of edible plant species within the varied vegetation types. These challenges were undoubtedly mastered, highlighting the Cape environment as a possible catalyst to improved human cognitive maturity.
- Full Text:
- Date Issued: 2014
Developing an understanding of the drivers of bat activity patterns relevant to wind turbines
- Authors: Thwaits, Tiffany Edan
- Date: 2014
- Subjects: Bats -- Behavior -- Climatic factors -- South Africa , Bats -- Ecology -- South Africa -- Eastern Cape , Wind power -- Environmental aspects
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10726 , http://hdl.handle.net/10948/d1020970
- Description: The increasing number of proposed wind farm developments in South Africa provides an immediate reason to assess bat activity and diversity, with the expectation of developing measures to mitigate for negative impacts. The overall aim of this thesis was contribute to an understanding of the drivers of bat activity, relevant to wind turbines, and to determine what factors (exogenous – environmental, or endogenous – intrinsic physiological processes) contributed to observed bat activity patterns, at the Metrowind Van Stadens Wind Farm in the Eastern Cape of South Africa. A combination of active (mist netting) and passive (acoustic) bat monitoring techniques were used to determine free-ranging bat activity patterns (Chapter 3). A total of 889 bat passes were recorded over 323 detector nights from the beginning of May 2012 to the end of December 2012. The Cape serotine bat (82 per cent) and the Egyptian free-tailed bat (97 per cent) made up the majority of all bat passes recorded on site. Large variations in bat activity per month and per hour were apparent, with bat activity peaking in May 2012 and during the first few hours after sunset (18:00-23:00). Patterns in nightly, free-ranging bat activity at the site were modelled against various environmental conditions. Month, temperature, wind speed and an interaction between month and rainfall were the most significant predictors of bat activity, explaining 80 per cent of the variation observed on free-ranging bat activity patterns. A total of eight Cape serotine bats (Table 4.1.) were caught in mist nets on site and changes in the resting metabolic rate (RMR) of torpid (n = 6), and normothermic (n = 2) bats, over a 24 hr period, were measured and used to predict free-ranging Cape serotine bat activity (Chapter 4). Cape serotine bats showed a high proclivity for torpor in the laboratory and peaks in RMR were observed at 18:00 (0.89 ± 0.95 VO2 mℓ.g-1.hr-1) and again from 20:00-21:00 (0.89 ± 0.91 VO2 mℓ.g-1.hr-1). Peaks in RMR of torpid individuals coincided with peaks in the average hourly free-ranging activity of the Cape serotine bat, and RMR explained 33 per cent of the variation and was a good predictor of free-ranging bat activity (R2 = 0.2914). This study showed that both exogenous (Chapter 3) and endogenous (Chapter 4) factors drive bat activity in the wild. Although this dissertation was not intended for wind turbine management, the information presented on the biology and activity of bats is important for managing interactions between bats and wind turbines. By determining what factors influence bat activity, we are able to predict when bats will be most active and thus can develop mitigation measures to reduce the potential impacts that wind turbines will have on the bat community. In order to conserve bats and reduce potential bat fatalities from occurring at the site, mitigation measures should be concentrated to those times when bats are most active (May and during the first few hours after sunset – 18:00 to 22:00).
- Full Text:
- Date Issued: 2014
- Authors: Thwaits, Tiffany Edan
- Date: 2014
- Subjects: Bats -- Behavior -- Climatic factors -- South Africa , Bats -- Ecology -- South Africa -- Eastern Cape , Wind power -- Environmental aspects
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10726 , http://hdl.handle.net/10948/d1020970
- Description: The increasing number of proposed wind farm developments in South Africa provides an immediate reason to assess bat activity and diversity, with the expectation of developing measures to mitigate for negative impacts. The overall aim of this thesis was contribute to an understanding of the drivers of bat activity, relevant to wind turbines, and to determine what factors (exogenous – environmental, or endogenous – intrinsic physiological processes) contributed to observed bat activity patterns, at the Metrowind Van Stadens Wind Farm in the Eastern Cape of South Africa. A combination of active (mist netting) and passive (acoustic) bat monitoring techniques were used to determine free-ranging bat activity patterns (Chapter 3). A total of 889 bat passes were recorded over 323 detector nights from the beginning of May 2012 to the end of December 2012. The Cape serotine bat (82 per cent) and the Egyptian free-tailed bat (97 per cent) made up the majority of all bat passes recorded on site. Large variations in bat activity per month and per hour were apparent, with bat activity peaking in May 2012 and during the first few hours after sunset (18:00-23:00). Patterns in nightly, free-ranging bat activity at the site were modelled against various environmental conditions. Month, temperature, wind speed and an interaction between month and rainfall were the most significant predictors of bat activity, explaining 80 per cent of the variation observed on free-ranging bat activity patterns. A total of eight Cape serotine bats (Table 4.1.) were caught in mist nets on site and changes in the resting metabolic rate (RMR) of torpid (n = 6), and normothermic (n = 2) bats, over a 24 hr period, were measured and used to predict free-ranging Cape serotine bat activity (Chapter 4). Cape serotine bats showed a high proclivity for torpor in the laboratory and peaks in RMR were observed at 18:00 (0.89 ± 0.95 VO2 mℓ.g-1.hr-1) and again from 20:00-21:00 (0.89 ± 0.91 VO2 mℓ.g-1.hr-1). Peaks in RMR of torpid individuals coincided with peaks in the average hourly free-ranging activity of the Cape serotine bat, and RMR explained 33 per cent of the variation and was a good predictor of free-ranging bat activity (R2 = 0.2914). This study showed that both exogenous (Chapter 3) and endogenous (Chapter 4) factors drive bat activity in the wild. Although this dissertation was not intended for wind turbine management, the information presented on the biology and activity of bats is important for managing interactions between bats and wind turbines. By determining what factors influence bat activity, we are able to predict when bats will be most active and thus can develop mitigation measures to reduce the potential impacts that wind turbines will have on the bat community. In order to conserve bats and reduce potential bat fatalities from occurring at the site, mitigation measures should be concentrated to those times when bats are most active (May and during the first few hours after sunset – 18:00 to 22:00).
- Full Text:
- Date Issued: 2014
Development of polymer templates for ZnO nanorods
- Authors: Dobson, Stephen Robert
- Date: 2014
- Subjects: Polymers , Semiconductor industry
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10556 , http://hdl.handle.net/10948/d1020805
- Description: One of the biggest challenges for the semiconductor industry is the development of nanofabrication techniques that allow for the fabrication of structures on a scale tens of nanometers in size. This provides greater potential functionality at reduced costs. Established conventional techniques, such as photolithography, are unable to achieve features below 30 nm due to the inherent limitations of the wavelength of light sources currently available. For this reason block copolymers received considerable attention in order to overcome these challenges in lithographic technology. Block copolymers have an inherent processing advantage of self assembling into various nanoscopic structures such as spheres, cylinders and lamellae amongst others on a scale below 50 nm. The dimensions and structures are readily tuneable based on molecular weights (Mw) and compositions of the copolymers. However, to be usable within industry a great deal more research still needs to be conducted on the use and nature of block copolymers. In this study the block copolymer of poly(styrene-block-methylmethacrylate) (PS-b-PMMA) was investigated as a potential nano-mask for semiconductor growth. Research was conducted on thin films of PS-b-PMMA by altering the parameters influencing the kinetics and thermodynamic effects on the thin films, in order to produce a structure of cylinders of PMMA perpendicular to the substrate within a PS matrix on a silicon (Si) substrate. It is shown that thermally annealing the PS-b-PMMA thin films under conditions where there is no preferential interaction of the substrate or open surface with either components of the block copolymer (i.e. PS or PMMA with Si or ambient) and at an appropriate thin film thickness, perpendicular cylinders of PMMA within a PS matrix form in the thin films. The determined ideal thin film thickness is 32 nm, with non-preferential interaction attained between block and substrate by coating a poly(styrene-random-methylmethacrylate) (PS-r-PMMA) on the Si substrate and annealing within a vacuum. Additionally, acetic acid, as a known selective solvent of PMMA, is used to further process the thin film of PS-b-PMMA. Thus a final PS nano-mask containing pores with a diameter tens of nanometers in size is produced. The pores are shown to have an average diameter of 13.5 nm. Measurements were taken throughout the investigation using a scanning probe microscope (SPM) to determine surface topography and phase morphology of the PS-b-PMMA thin films. X-ray reflectometry (XRR) is used to measure film thickness. The research in this study shows that thin films of PS containing hexagonally arranged pores can be produced and could find potential use as a nano-mask for semiconductor growth.
- Full Text:
- Date Issued: 2014
- Authors: Dobson, Stephen Robert
- Date: 2014
- Subjects: Polymers , Semiconductor industry
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10556 , http://hdl.handle.net/10948/d1020805
- Description: One of the biggest challenges for the semiconductor industry is the development of nanofabrication techniques that allow for the fabrication of structures on a scale tens of nanometers in size. This provides greater potential functionality at reduced costs. Established conventional techniques, such as photolithography, are unable to achieve features below 30 nm due to the inherent limitations of the wavelength of light sources currently available. For this reason block copolymers received considerable attention in order to overcome these challenges in lithographic technology. Block copolymers have an inherent processing advantage of self assembling into various nanoscopic structures such as spheres, cylinders and lamellae amongst others on a scale below 50 nm. The dimensions and structures are readily tuneable based on molecular weights (Mw) and compositions of the copolymers. However, to be usable within industry a great deal more research still needs to be conducted on the use and nature of block copolymers. In this study the block copolymer of poly(styrene-block-methylmethacrylate) (PS-b-PMMA) was investigated as a potential nano-mask for semiconductor growth. Research was conducted on thin films of PS-b-PMMA by altering the parameters influencing the kinetics and thermodynamic effects on the thin films, in order to produce a structure of cylinders of PMMA perpendicular to the substrate within a PS matrix on a silicon (Si) substrate. It is shown that thermally annealing the PS-b-PMMA thin films under conditions where there is no preferential interaction of the substrate or open surface with either components of the block copolymer (i.e. PS or PMMA with Si or ambient) and at an appropriate thin film thickness, perpendicular cylinders of PMMA within a PS matrix form in the thin films. The determined ideal thin film thickness is 32 nm, with non-preferential interaction attained between block and substrate by coating a poly(styrene-random-methylmethacrylate) (PS-r-PMMA) on the Si substrate and annealing within a vacuum. Additionally, acetic acid, as a known selective solvent of PMMA, is used to further process the thin film of PS-b-PMMA. Thus a final PS nano-mask containing pores with a diameter tens of nanometers in size is produced. The pores are shown to have an average diameter of 13.5 nm. Measurements were taken throughout the investigation using a scanning probe microscope (SPM) to determine surface topography and phase morphology of the PS-b-PMMA thin films. X-ray reflectometry (XRR) is used to measure film thickness. The research in this study shows that thin films of PS containing hexagonally arranged pores can be produced and could find potential use as a nano-mask for semiconductor growth.
- Full Text:
- Date Issued: 2014
Electrical conductivity experiments on carbon-rich Karoo shales and forward modelling of aeromagnetic data across the Beattie Anomaly
- Authors: Branch, Thomas Cameron
- Date: 2014
- Subjects: Earth sciences -- South Africa -- Karoo , Geology -- South Africa -- Karoo
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10662 , http://hdl.handle.net/10948/d1014544
- Description: The Beattie Magnetic Anomaly is the world’s longest terrestrial magnetic anomaly with a strike length of over 1000 km and a wavelength in excess of 100 km. Collinear with this is a large belt of elevated crustal conductivities called the Southern Cape Conductive Belt. Historical crustal interpretations proposed a common source of serpentinized ophiolite as an explanation for both the anomalous crustal magnetic susceptibility and electrical conductivities. Spreading between the Western and Eastern Cape of South Africa the mid- to lower crust that hosts these anomalies is obscured by the overlying Cape and Karoo Supergroups. Between 2003 and 2006, three high resolution geophysical experiments were completed across the surface maximum of the Beattie Magnetic Anomaly (BMA) and the Southern Cape Conductive Belt (SCCB). These included a magnetotelluric (MT) survey and near vertical reflection and wide angle refraction seismic profiles. Within the MT inversion model the SCCB appeared as a composite anomaly, which included a mid-crustal conductor which is spatially associated with the BMA and a laterally continuous upper crustal conductor which is located at depths equivalent to the lower Karoo Supergroup. Subsequently; the upper crustal conductor was identified in northern and eastern extensions of the magnetotelluric profile; a distance in excess of 400 km. Historical magnetometer and Schlumberger Sounding experiments have previously identified elevated conductivities in the Karoo sequences which were attributed to the Whitehill and Prince Albert formations. These carboniferous, transgressive sediments are known to be conductive from borehole conductivity surveys and direct measurements at surface. In order to constrain the conductive properties of these sediments, impedance spectroscopy (IS) experiments were completed on core samples collected from a historical borehole drilled near to the MT profile. Part One of this thesis presents the results of these experiments, which support the proposition that the Whitehill and Prince Albert Formations are responsible for the laterally continuous, sub-horizontal, upper crustal conductor visible in the MT inversion model. Vitrinite reflectance studies were performed on the same samples by the Montanuniversität, in Leoben, these results corroborate the proposition that elevated organic carbon, of meta-anthracite rank, is the primary conductive phase for the Whitehill and Prince Albert formations. Part two of this thesis completed forward modelling exercises using historical aeromagnetic data previously collected across the Beattie Magnetic Anomaly. Preliminary models were unable to fit the geometry of any single magnetic model with conductors present in the MT inversion model discounting the proposition that the SCCB and BMA arise from a single crustal unit. Two constrained models were arrived at through an iterative process that sought a best fit between the measured data and the NVR crustal interpretations. The first model, proposes a largely resistive unit which incorporates portions of elevated crustal conductivity; these conductors are spatially correlated to crustal portions also characterised by high seismic reflectivity. The size of this modelled body suggest the likely host of the BMA is an intermediate plutonic terrane, analogous with the Natal sector of the Namaqua Natal Mobile Belt as well as the Heimefrontfjella in Dronning Maud Land, Antarctica, with magnetite hosted within shear zones. This is in agreement with previous studies. The second model proposes a lower crustal sliver imaged in the NVR data at depths proximal to the Curie Isotherm for magnetite and hematite as the source of the BMA. At these depths geomagnetic properties such as burial magnetisation or thermo-viscous remanent magnetism (TVRM) can potentially be linked to regional scale tectonic processes and can theoretically elevate a body’s net magnetic susceptibility. TVRM has been proposed for long wavelength crustal anomalies elsewhere.
- Full Text:
- Date Issued: 2014
- Authors: Branch, Thomas Cameron
- Date: 2014
- Subjects: Earth sciences -- South Africa -- Karoo , Geology -- South Africa -- Karoo
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10662 , http://hdl.handle.net/10948/d1014544
- Description: The Beattie Magnetic Anomaly is the world’s longest terrestrial magnetic anomaly with a strike length of over 1000 km and a wavelength in excess of 100 km. Collinear with this is a large belt of elevated crustal conductivities called the Southern Cape Conductive Belt. Historical crustal interpretations proposed a common source of serpentinized ophiolite as an explanation for both the anomalous crustal magnetic susceptibility and electrical conductivities. Spreading between the Western and Eastern Cape of South Africa the mid- to lower crust that hosts these anomalies is obscured by the overlying Cape and Karoo Supergroups. Between 2003 and 2006, three high resolution geophysical experiments were completed across the surface maximum of the Beattie Magnetic Anomaly (BMA) and the Southern Cape Conductive Belt (SCCB). These included a magnetotelluric (MT) survey and near vertical reflection and wide angle refraction seismic profiles. Within the MT inversion model the SCCB appeared as a composite anomaly, which included a mid-crustal conductor which is spatially associated with the BMA and a laterally continuous upper crustal conductor which is located at depths equivalent to the lower Karoo Supergroup. Subsequently; the upper crustal conductor was identified in northern and eastern extensions of the magnetotelluric profile; a distance in excess of 400 km. Historical magnetometer and Schlumberger Sounding experiments have previously identified elevated conductivities in the Karoo sequences which were attributed to the Whitehill and Prince Albert formations. These carboniferous, transgressive sediments are known to be conductive from borehole conductivity surveys and direct measurements at surface. In order to constrain the conductive properties of these sediments, impedance spectroscopy (IS) experiments were completed on core samples collected from a historical borehole drilled near to the MT profile. Part One of this thesis presents the results of these experiments, which support the proposition that the Whitehill and Prince Albert Formations are responsible for the laterally continuous, sub-horizontal, upper crustal conductor visible in the MT inversion model. Vitrinite reflectance studies were performed on the same samples by the Montanuniversität, in Leoben, these results corroborate the proposition that elevated organic carbon, of meta-anthracite rank, is the primary conductive phase for the Whitehill and Prince Albert formations. Part two of this thesis completed forward modelling exercises using historical aeromagnetic data previously collected across the Beattie Magnetic Anomaly. Preliminary models were unable to fit the geometry of any single magnetic model with conductors present in the MT inversion model discounting the proposition that the SCCB and BMA arise from a single crustal unit. Two constrained models were arrived at through an iterative process that sought a best fit between the measured data and the NVR crustal interpretations. The first model, proposes a largely resistive unit which incorporates portions of elevated crustal conductivity; these conductors are spatially correlated to crustal portions also characterised by high seismic reflectivity. The size of this modelled body suggest the likely host of the BMA is an intermediate plutonic terrane, analogous with the Natal sector of the Namaqua Natal Mobile Belt as well as the Heimefrontfjella in Dronning Maud Land, Antarctica, with magnetite hosted within shear zones. This is in agreement with previous studies. The second model proposes a lower crustal sliver imaged in the NVR data at depths proximal to the Curie Isotherm for magnetite and hematite as the source of the BMA. At these depths geomagnetic properties such as burial magnetisation or thermo-viscous remanent magnetism (TVRM) can potentially be linked to regional scale tectonic processes and can theoretically elevate a body’s net magnetic susceptibility. TVRM has been proposed for long wavelength crustal anomalies elsewhere.
- Full Text:
- Date Issued: 2014
Electron microscopy characterisation of polycrystalline silicon carbide
- Authors: Ndzane, Nolufefe Muriel
- Date: 2014
- Subjects: Electron microscopy , Silicon carbide
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10553 , http://hdl.handle.net/10948/d1020634
- Description: This dissertation focuses on an electron microscopy investigation of the microstructure of SiC layers in TRISO coated particles deposited by chemical vapour deposition under different experimental conditions, which include temperature, concentration of gases and deposition time. The polycrystalline β-SiC was deposited from the decomposition of methyl trichlorosilane MTS in the presence of hydrogen (H2) as carrier gas. Scanning electron microscopy (SEM), using the backscattered electron (BSE) mode, was used to image the microstructure of and defects in the SiC layers of TRISO particles. Electron backscatter diffraction (EBSD) in the SEM was used to determine the SiC grain sizes and distribution thereof in TRISO particles deposited under different conditions. For samples with a poor EBSD indexing rate, transmission Kikuchi diffraction and transmission electron microscopy (TEM) investigations were also carried out. From the results, the effects of growth temperature on the SiC microstructure, specifically on the grain size and shape and the porosity were determined. The effects of cooling or non-cooling of the gas inlet nozzle on the SiC microstructure were also investigated. TEM and scanning TEM (STEM) analyses of the SiC layers in TRISO particles were performed to image the defects and reveal the crystallinity of SiC layers. The microstructure and composition of SiC tubes fabricated by reaction bonding (RB) was also investigated by using electron microscopy and Raman spectroscopy. SEM-BSE imaging of RBSiC samples allowed the identification of impurities and free silicon in the RBSiC. Finally, the penetration of the metallic fission product, palladium, in reaction bonded SiC at a temperature of a 1000ºC is determined. A brief comment on the suitability of RBSiC as candidate for fuel cladding in a PWR is made. A short discussion of the suitability of the characterisation techniques used is included at the end.
- Full Text:
- Date Issued: 2014
- Authors: Ndzane, Nolufefe Muriel
- Date: 2014
- Subjects: Electron microscopy , Silicon carbide
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10553 , http://hdl.handle.net/10948/d1020634
- Description: This dissertation focuses on an electron microscopy investigation of the microstructure of SiC layers in TRISO coated particles deposited by chemical vapour deposition under different experimental conditions, which include temperature, concentration of gases and deposition time. The polycrystalline β-SiC was deposited from the decomposition of methyl trichlorosilane MTS in the presence of hydrogen (H2) as carrier gas. Scanning electron microscopy (SEM), using the backscattered electron (BSE) mode, was used to image the microstructure of and defects in the SiC layers of TRISO particles. Electron backscatter diffraction (EBSD) in the SEM was used to determine the SiC grain sizes and distribution thereof in TRISO particles deposited under different conditions. For samples with a poor EBSD indexing rate, transmission Kikuchi diffraction and transmission electron microscopy (TEM) investigations were also carried out. From the results, the effects of growth temperature on the SiC microstructure, specifically on the grain size and shape and the porosity were determined. The effects of cooling or non-cooling of the gas inlet nozzle on the SiC microstructure were also investigated. TEM and scanning TEM (STEM) analyses of the SiC layers in TRISO particles were performed to image the defects and reveal the crystallinity of SiC layers. The microstructure and composition of SiC tubes fabricated by reaction bonding (RB) was also investigated by using electron microscopy and Raman spectroscopy. SEM-BSE imaging of RBSiC samples allowed the identification of impurities and free silicon in the RBSiC. Finally, the penetration of the metallic fission product, palladium, in reaction bonded SiC at a temperature of a 1000ºC is determined. A brief comment on the suitability of RBSiC as candidate for fuel cladding in a PWR is made. A short discussion of the suitability of the characterisation techniques used is included at the end.
- Full Text:
- Date Issued: 2014
Identification of membrane biomakers for colorectal cancer using an in-solico and molecular approach
- Authors: Van Vuuren, Larry Peter
- Date: 2014
- Subjects: Cancer -- Research , Colon (Anatomy) -- Cancer , Rectum -- Cancer
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/47970 , vital:40457
- Description: The aim of this study was to identify membrane biomarkers for colorectal cancer using an insilico and molecular approach. Colorectal cancer (CRC) globally accounts for more than half a million deaths. In South Africa alone, approximately one in 97 men is at risk of getting CRC; and for women, it is one in 162. Novel and non-invasive diagnostic tools, such as biomarkers, are needed for early CRC detection. In order to reduce the fatality rate in this disease, Biomarkers are used as indicators of a biological state; and they are measurable in biological media. They can be used to distinguish between a diseased state and a normal state, thus aiding diagnostics, response to specific therapies, and screening for an early diagnosis. A gene list of potential CRC biomarkers was generated by mining two gene databases, namely: Oncomine and Gene Expression Atlas. A total of 44 candidate genes were identified, based on their location on the cell surface, using the Database for Annotation, Visualisation and Integrated Discovery. These 44 genes were then subjected to an in-depth literature mining. The literature search parameters in PubMed, PubMed Central, Google Scholar and Science direct revealed publications showing that 23 genes were validated, while 21 genes were not validated. Nineteen genes were selected for gene validation in human colorectal cancer and healthy tissue of twelve patients. Total RNA was extracted from 12 colorectal cancer and 12 healthy tissue samples. The RNA was then quantified and reverse-transcribed into cDNA for gene expression analysis. The qPCR running conditions were optimized, by running a melting curve, in order to determine the optimum annealing temperatures. Primarily melt curves were run for nineteen of these twenty-one genes. Melt-curve analysis showed that nine genes were poor candidates for further validation studies; and therefore, only ten genes, namely: AGTRAP, ANKRD46, BACE2, CFB, CIAO1, NOMO3, PTDSS1, SLC5A6, TNFRSF12A and ZDHHC9 were validated by qPCR in human resected colorectal carcinoma and the normal tissues of twelve patients. The qPCR results showed that ZDHHC9 and the SLC5A6 genes were the only two statistically significant ones; and they were found to be down-regulated in human colorectal cancer vs healthy tissue samples.
- Full Text:
- Date Issued: 2014
Identification of membrane biomakers for colorectal cancer using an in-solico and molecular approach
- Authors: Van Vuuren, Larry Peter
- Date: 2014
- Subjects: Cancer -- Research , Colon (Anatomy) -- Cancer , Rectum -- Cancer
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/47970 , vital:40457
- Description: The aim of this study was to identify membrane biomarkers for colorectal cancer using an insilico and molecular approach. Colorectal cancer (CRC) globally accounts for more than half a million deaths. In South Africa alone, approximately one in 97 men is at risk of getting CRC; and for women, it is one in 162. Novel and non-invasive diagnostic tools, such as biomarkers, are needed for early CRC detection. In order to reduce the fatality rate in this disease, Biomarkers are used as indicators of a biological state; and they are measurable in biological media. They can be used to distinguish between a diseased state and a normal state, thus aiding diagnostics, response to specific therapies, and screening for an early diagnosis. A gene list of potential CRC biomarkers was generated by mining two gene databases, namely: Oncomine and Gene Expression Atlas. A total of 44 candidate genes were identified, based on their location on the cell surface, using the Database for Annotation, Visualisation and Integrated Discovery. These 44 genes were then subjected to an in-depth literature mining. The literature search parameters in PubMed, PubMed Central, Google Scholar and Science direct revealed publications showing that 23 genes were validated, while 21 genes were not validated. Nineteen genes were selected for gene validation in human colorectal cancer and healthy tissue of twelve patients. Total RNA was extracted from 12 colorectal cancer and 12 healthy tissue samples. The RNA was then quantified and reverse-transcribed into cDNA for gene expression analysis. The qPCR running conditions were optimized, by running a melting curve, in order to determine the optimum annealing temperatures. Primarily melt curves were run for nineteen of these twenty-one genes. Melt-curve analysis showed that nine genes were poor candidates for further validation studies; and therefore, only ten genes, namely: AGTRAP, ANKRD46, BACE2, CFB, CIAO1, NOMO3, PTDSS1, SLC5A6, TNFRSF12A and ZDHHC9 were validated by qPCR in human resected colorectal carcinoma and the normal tissues of twelve patients. The qPCR results showed that ZDHHC9 and the SLC5A6 genes were the only two statistically significant ones; and they were found to be down-regulated in human colorectal cancer vs healthy tissue samples.
- Full Text:
- Date Issued: 2014
Influence of anthropogenic stressors on the behaviour and mortality of the endangered African penguin
- Authors: Nyengera, Reason
- Date: 2014
- Subjects: African penguin -- South Africa -- Algoa Bay , Birds -- Mortality -- South Africa -- Algoa Bay , Endangered species -- Breeding -- South Africa -- Algoa Bay
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/3064 , vital:20395
- Description: This study investigated the potential impacts of several anthropogenic stressors on the movement and survival of African penguins in Algoa Bay, taking into account prey availability and environmental conditions (sea surface temperature and chlorophyll productivity). The primary drive for the study was based on the seismic exploration, which took place in the habitat of the endangered African penguin. The research was also carried out to understand how pelagic fishing and prey availability influence the broader behavioural and mortality aspects of penguins. To achieve this goal, I used monthly beach surveys to assess seabird mortality, admissions of penguins in rehabilitation centres and the monitoring of breeding penguins’ movement at sea through individual GPS tracking. In addition, prey distribution and abundance were monitored with acoustic surveys to assess potential changes in relation anthropogenic stressors. Breeding African penguins did not react dramatically to seismic activities, except on St Croix Island where they changed their foraging direction during the seismic period. There was no evidence of a siginficant increase in African penguin carcasses encountered or strandings along the beaches during the period of seismic activity. However, a sharp increase in encounter rate was recorded soon after seismic operations, which may potentially indicate a delay between the effect of seismic activities on penguin mortality and the encounter of the related carcasses after the operation. However, the impact of seismic surveys on penguins may be long-term rather than short term, and additional studies would be needed to reveal long-term effects of seismic activities, if any. Foraging effort of breeding African penguins increased substantially in the presence of commercial fishing activities within close proximity to the colonies. To a greater extent, at-sea movement patterns and counts of beach cast carcasses were largely influenced by prey availability. Penguins spent more time at sea, traveled longer and covered a larger foraging area during periods of relatvely low pelagic fish abundance. There was also a sharp increase in African penguin mortality during periods of low prey availability in the Bay. However, environmental conditions showed some influence over these interactions. Foraging effort of breeding African penguins increased substantially in the presence of commercial fishing activities within close proximity to the colonies. To a greater extent, at-sea movement patterns and counts of beach cast carcasses were largely influenced by prey availability. Penguins spent more time at sea, traveled longer and covered a larger foraging area during periods of relatvely low pelagic fish abundance. There was also a sharp increase in African penguin mortality during periods of low prey availability in the Bay. However, environmental conditions showed some influence over these interactions. For example a red tide event during in period of low prey availability, made it difficult to understand impacts of prey on penguins difficult. Both anthropogenic stressors and environmental conditions influenced African penguins’ behaviour and survival. Due to the worrying trend of African penguins in South Africa for the past few years, all conservation management efforts to increase penguin numbers and limit their mortality are necessary. This study highlights the negative impact of industrial fishing on this Endangered species and the rapid increase in mortality of penguins during times of low prey availability. A network of Marine Protected Areas would certainly increase food availability to African penguins by limiting competition with fisheries, and contribute to increasing the population numbers.
- Full Text:
- Date Issued: 2014
- Authors: Nyengera, Reason
- Date: 2014
- Subjects: African penguin -- South Africa -- Algoa Bay , Birds -- Mortality -- South Africa -- Algoa Bay , Endangered species -- Breeding -- South Africa -- Algoa Bay
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/3064 , vital:20395
- Description: This study investigated the potential impacts of several anthropogenic stressors on the movement and survival of African penguins in Algoa Bay, taking into account prey availability and environmental conditions (sea surface temperature and chlorophyll productivity). The primary drive for the study was based on the seismic exploration, which took place in the habitat of the endangered African penguin. The research was also carried out to understand how pelagic fishing and prey availability influence the broader behavioural and mortality aspects of penguins. To achieve this goal, I used monthly beach surveys to assess seabird mortality, admissions of penguins in rehabilitation centres and the monitoring of breeding penguins’ movement at sea through individual GPS tracking. In addition, prey distribution and abundance were monitored with acoustic surveys to assess potential changes in relation anthropogenic stressors. Breeding African penguins did not react dramatically to seismic activities, except on St Croix Island where they changed their foraging direction during the seismic period. There was no evidence of a siginficant increase in African penguin carcasses encountered or strandings along the beaches during the period of seismic activity. However, a sharp increase in encounter rate was recorded soon after seismic operations, which may potentially indicate a delay between the effect of seismic activities on penguin mortality and the encounter of the related carcasses after the operation. However, the impact of seismic surveys on penguins may be long-term rather than short term, and additional studies would be needed to reveal long-term effects of seismic activities, if any. Foraging effort of breeding African penguins increased substantially in the presence of commercial fishing activities within close proximity to the colonies. To a greater extent, at-sea movement patterns and counts of beach cast carcasses were largely influenced by prey availability. Penguins spent more time at sea, traveled longer and covered a larger foraging area during periods of relatvely low pelagic fish abundance. There was also a sharp increase in African penguin mortality during periods of low prey availability in the Bay. However, environmental conditions showed some influence over these interactions. Foraging effort of breeding African penguins increased substantially in the presence of commercial fishing activities within close proximity to the colonies. To a greater extent, at-sea movement patterns and counts of beach cast carcasses were largely influenced by prey availability. Penguins spent more time at sea, traveled longer and covered a larger foraging area during periods of relatvely low pelagic fish abundance. There was also a sharp increase in African penguin mortality during periods of low prey availability in the Bay. However, environmental conditions showed some influence over these interactions. For example a red tide event during in period of low prey availability, made it difficult to understand impacts of prey on penguins difficult. Both anthropogenic stressors and environmental conditions influenced African penguins’ behaviour and survival. Due to the worrying trend of African penguins in South Africa for the past few years, all conservation management efforts to increase penguin numbers and limit their mortality are necessary. This study highlights the negative impact of industrial fishing on this Endangered species and the rapid increase in mortality of penguins during times of low prey availability. A network of Marine Protected Areas would certainly increase food availability to African penguins by limiting competition with fisheries, and contribute to increasing the population numbers.
- Full Text:
- Date Issued: 2014
Lesson for spatial planning: post-1994 human settlement development in Nelson Mandela Bay Municipality
- Authors: Nagar, Manesh
- Date: 2014
- Subjects: Land settlement -- South Africa -- Port Elizabeth -- 21st century Human geography -- South Africa -- Port Elizabeth -- 21st century , City planning -- South Africa -- Port Elizabeth
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/47992 , vital:40461
- Description: Spatial planning of human settlements in South African cities, particularly during the apartheid era, has been extensively investigated. Urban development in Nelson Mandela Bay (formerly known as Port Elizabeth) resembled most other South African cities and towns based on the informants of the apartheid spatial planning policies since 1948. Consequent to the colonial style urban forms, the typical South African city and town (including Nelson Mandela Bay) faces numerous challenges to eradicate the effects of the apartheid legacies of functional and structural inefficiencies during the post-apartheid period. The research aims at examining the effectiveness of the post-apartheid residential policies with emphasis on the ‘Breaking New Ground’ policy in meeting the government’s expectations of restructuring and transformation of spatial urban planning after 1994, between 2004 and 2011 in Walmer Township. More specifically, the objectives of the study were to determine the extent of eradication of informal settlements in the study area; functional integration to investigate the extent of transformation of the study area in terms of functional integration; and to analyse the financially sustainability of the area, focused on the road network. The study was theoretically and conceptually influenced by colonial and postcolonial policies that impacted on urban development and spatial planning in the former colonial city. Methodologically, both quantitative and qualitative approaches were adopted in this investigation and in a case study. The data used for the study was obtained from both primary and secondary sources. Primary data were collected by using a remote sensing technique and via face-to-face interviews, where the interviewees were selected at random from within the identified suburb areas. Secondary data were obtained from scholarly articles and books, and government agencies and departments. The Chi-square test of dependence was used and this was to determine whether there was a relationship between variables. The results indicate that there are over 3,000 informal settlement dwellings in 2011, and very little eradication of informal settlement has been achieved. Although there are signs of heightened efforts of functional integration, it still remains limited. It was revealed that the local government has missed opportunities to promote the BNG policy objectives, particularly in the application of higher density developments and to promote cost-effective road networks. Based on the outcomes of the study, there are clear signs of the post-apartheid governments’ slow pace to transform human settlements. The post-apartheid housing policies, in particular the BNG policy, have not effectively transformed human settlements as envisaged.
- Full Text:
- Date Issued: 2014
- Authors: Nagar, Manesh
- Date: 2014
- Subjects: Land settlement -- South Africa -- Port Elizabeth -- 21st century Human geography -- South Africa -- Port Elizabeth -- 21st century , City planning -- South Africa -- Port Elizabeth
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/47992 , vital:40461
- Description: Spatial planning of human settlements in South African cities, particularly during the apartheid era, has been extensively investigated. Urban development in Nelson Mandela Bay (formerly known as Port Elizabeth) resembled most other South African cities and towns based on the informants of the apartheid spatial planning policies since 1948. Consequent to the colonial style urban forms, the typical South African city and town (including Nelson Mandela Bay) faces numerous challenges to eradicate the effects of the apartheid legacies of functional and structural inefficiencies during the post-apartheid period. The research aims at examining the effectiveness of the post-apartheid residential policies with emphasis on the ‘Breaking New Ground’ policy in meeting the government’s expectations of restructuring and transformation of spatial urban planning after 1994, between 2004 and 2011 in Walmer Township. More specifically, the objectives of the study were to determine the extent of eradication of informal settlements in the study area; functional integration to investigate the extent of transformation of the study area in terms of functional integration; and to analyse the financially sustainability of the area, focused on the road network. The study was theoretically and conceptually influenced by colonial and postcolonial policies that impacted on urban development and spatial planning in the former colonial city. Methodologically, both quantitative and qualitative approaches were adopted in this investigation and in a case study. The data used for the study was obtained from both primary and secondary sources. Primary data were collected by using a remote sensing technique and via face-to-face interviews, where the interviewees were selected at random from within the identified suburb areas. Secondary data were obtained from scholarly articles and books, and government agencies and departments. The Chi-square test of dependence was used and this was to determine whether there was a relationship between variables. The results indicate that there are over 3,000 informal settlement dwellings in 2011, and very little eradication of informal settlement has been achieved. Although there are signs of heightened efforts of functional integration, it still remains limited. It was revealed that the local government has missed opportunities to promote the BNG policy objectives, particularly in the application of higher density developments and to promote cost-effective road networks. Based on the outcomes of the study, there are clear signs of the post-apartheid governments’ slow pace to transform human settlements. The post-apartheid housing policies, in particular the BNG policy, have not effectively transformed human settlements as envisaged.
- Full Text:
- Date Issued: 2014
Liver steatosis and insulin-resistance : reversal by Sutherlandia frutescens
- Authors: Clarke, Stephen
- Date: 2014
- Subjects: Insulin resistance , Diabetes -- Treatment
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10348 , http://hdl.handle.net/10948/d1020788
- Description: Type 2 diabetes mellitus (T2DM) is rapidly emerging as one of the greatest global health issues of the 21st century. Insulin-resistance is a condition associated with T2DM and in the cell it is defined as the inadequate strength of insulin signalling from the insulin receptor downstream to the final substrates of insulin action involved in multiple metabolic, gene expression, and mitogenic aspects of cellular function. To investigate the potential mechanisms involved in the development of insulin-resistance, two in vitro liver cell models were established using palmitate or a combination of insulin and fructose as inducers. The development of insulin-resistance was determined via the capacity of the hepatocytes to maintain normal glucose metabolism functionality by measuring hepatic gluconeogenesis and glycogenolysis. It was established that the treatments induced the development of insulinresistance after 24 hours chronic exposure. Previous studies have investigated the potential of Sutherlandia frutescens extracts as therapeutic agents for insulin-resistance. The aim of this study was thus to investigate the ability of a hot aqueous extract of S. frutescens to reverse the insulin-resistant state, via measuring gluconeogenesis and glycogenolysis, the associated changes in cellular physiology (lipid accumulation, oxidative stress, and acetyl- CoA levels), and changes in mRNA expression. The results showed that S. frutescens had a significant effect on reversing the insulin-resistant state in both models of insulin-resistance. Furthermore, S. frutescens was capable of reducing lipid accumulation in the form of triacylglycerol in the high insulin/fructose model, while this was unaffected in the palmitate model. However, S. frutescens did reduce the accumulation of diacylglycerol in the palmitate model. Oxidative stress, seen to be associated with the insulin-resistant state, was successfully treated using the extract, as indicated by a reduction in reactive oxygen species. However no change was seen in the nitric oxide levels, in either model. Interestingly, although S. frutescens had no effect on the level of acetyl-CoA in the insulin/fructose model, it was found to increase this in the palmitate model. It is suggested that this may be due to increased β-oxidation and metabolic activity induced by the extract. The analysis of mRNA expression gave some insight into possible mechanisms by which insulin-resistance develops, although the results were inconclusive due to high variability in samples and the possibility of the RNA being compromised. Future studies will address this issue. The results of this study reflect different proposed clinical causes of insulin-resistance through the responses seen in the two cell models. These indicate that liver steatosis and insulin-resistance are induced by high palmitate as well as high insulin and fructose levels, and reversed by S. frutescens. Therefore the potential of S. frutescens to be used as a therapeutic agent in the treatment of insulin-resistance is indicated by this study.
- Full Text:
- Date Issued: 2014
- Authors: Clarke, Stephen
- Date: 2014
- Subjects: Insulin resistance , Diabetes -- Treatment
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10348 , http://hdl.handle.net/10948/d1020788
- Description: Type 2 diabetes mellitus (T2DM) is rapidly emerging as one of the greatest global health issues of the 21st century. Insulin-resistance is a condition associated with T2DM and in the cell it is defined as the inadequate strength of insulin signalling from the insulin receptor downstream to the final substrates of insulin action involved in multiple metabolic, gene expression, and mitogenic aspects of cellular function. To investigate the potential mechanisms involved in the development of insulin-resistance, two in vitro liver cell models were established using palmitate or a combination of insulin and fructose as inducers. The development of insulin-resistance was determined via the capacity of the hepatocytes to maintain normal glucose metabolism functionality by measuring hepatic gluconeogenesis and glycogenolysis. It was established that the treatments induced the development of insulinresistance after 24 hours chronic exposure. Previous studies have investigated the potential of Sutherlandia frutescens extracts as therapeutic agents for insulin-resistance. The aim of this study was thus to investigate the ability of a hot aqueous extract of S. frutescens to reverse the insulin-resistant state, via measuring gluconeogenesis and glycogenolysis, the associated changes in cellular physiology (lipid accumulation, oxidative stress, and acetyl- CoA levels), and changes in mRNA expression. The results showed that S. frutescens had a significant effect on reversing the insulin-resistant state in both models of insulin-resistance. Furthermore, S. frutescens was capable of reducing lipid accumulation in the form of triacylglycerol in the high insulin/fructose model, while this was unaffected in the palmitate model. However, S. frutescens did reduce the accumulation of diacylglycerol in the palmitate model. Oxidative stress, seen to be associated with the insulin-resistant state, was successfully treated using the extract, as indicated by a reduction in reactive oxygen species. However no change was seen in the nitric oxide levels, in either model. Interestingly, although S. frutescens had no effect on the level of acetyl-CoA in the insulin/fructose model, it was found to increase this in the palmitate model. It is suggested that this may be due to increased β-oxidation and metabolic activity induced by the extract. The analysis of mRNA expression gave some insight into possible mechanisms by which insulin-resistance develops, although the results were inconclusive due to high variability in samples and the possibility of the RNA being compromised. Future studies will address this issue. The results of this study reflect different proposed clinical causes of insulin-resistance through the responses seen in the two cell models. These indicate that liver steatosis and insulin-resistance are induced by high palmitate as well as high insulin and fructose levels, and reversed by S. frutescens. Therefore the potential of S. frutescens to be used as a therapeutic agent in the treatment of insulin-resistance is indicated by this study.
- Full Text:
- Date Issued: 2014
Models for forecasting residential property prices using paired comparisons
- Authors: Mpapela, Sinazo
- Date: 2014
- Subjects: Paired comparisons (Statistics) , Statistics
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/5839 , vital:21006
- Description: Residential real estate forecasting has become a part of the larger process of business planning and strategic management. Several studies of housing price trends recommend confining statistical analysis to repeated sales of residential property. This study presents an alternate methodology which combines information only on repeated residential sales regardless of the changes that has been made in the house in-between the sales. Additive and multiplicative models were used to forecast the residential property prices in Nelson Mandela Metropole. Data was collected from various sources and was reconciled into one data set for analysis through a process of data screening.
- Full Text:
- Date Issued: 2014
- Authors: Mpapela, Sinazo
- Date: 2014
- Subjects: Paired comparisons (Statistics) , Statistics
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/5839 , vital:21006
- Description: Residential real estate forecasting has become a part of the larger process of business planning and strategic management. Several studies of housing price trends recommend confining statistical analysis to repeated sales of residential property. This study presents an alternate methodology which combines information only on repeated residential sales regardless of the changes that has been made in the house in-between the sales. Additive and multiplicative models were used to forecast the residential property prices in Nelson Mandela Metropole. Data was collected from various sources and was reconciled into one data set for analysis through a process of data screening.
- Full Text:
- Date Issued: 2014
Options for eland: a multi-scale assessment of antipredatory responses of a vulnerable prey species to their dominant predator in the Eastern Cape, South Africa
- Authors: Leaver, Jessica
- Date: 2014
- Subjects: Endangered species -- South Africa -- Eastern Cape , Predatory animals -- Control -- South Africa -- Eastern Cape
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/6570 , vital:21113
- Description: Eland Tragelaphus oryx are the largest and slowest African antelope, falling within the preferred weight range of the prey of lions Panthera leo. Little is known, however, about the antipredatory strategies employed by eland. Rapid population declines in several small reserves following the reintroduction of lions suggest that the antipredatory strategies of eland may be compromised in spatially limited areas. This emphasises the need for research aimed at investigating how eland respond to lions, particularly in the spatial context, given that lions are increasingly being reintroduced into small reserves in South Africa. This study aimed to investigate lion-eland interactions at multiple scales and determine where on the landscape eland were vulnerable to predation. Adult female eland (n = 3 per site) in breeding herds were collared with GPS satellite collars in two study sites; the Nyathi section of Addo Elephant National Park (Nyathi) and Mountain Zebra National Park (MZNP) in the Eastern Cape, South Africa. A reintroduced population of lions, comprising two males and one female, was present in each study site, with individuals fitted with GPS satellite collars. At a broad spatiotemporal scale, eland did not avoid lions and there was considerable overlap between eland and lion home ranges in both study sites. At a finer spatiotemporal scale however, eland and lion space use was asynchronous in time, except in the case of the female lion in Nyathi where there was considerable overlap at the finest temporal scale investigated (i.e. monthly). Herd-associated eland in Nyathi were killed most frequently in areas associated with high long-term use by the female lion, showing that failure to avoid the female lion at a fine scale increased predation risk for eland. Secondly, eland in Nyathi were killed most frequently in habitat types of intermediate structural density (i.e. mixed habitats), which limited the viewshed of eland but presumably offered increased forage. This habitat type was selected for by eland, despite it being associated with a higher level of predation risk. This suggested that eland in Nyathi traded off safety for forage. In MZNP, predation of herd-associated eland was low which reflected the limited spatial overlap between eland and lion at a fine scale in this reserve. In Nyathi, but not in MZNP, eland responded to lions within 1.5 km by increasing their movement rate, with this response particularly strong at night. The findings of this study show that eland responses to lions are scale-dependent and site-specific. Furthermore, eland responses to lions were shown to be lion gender-specific. This study has increased our understanding of the antipredatory behaviours of eland and demonstrated the importance of investigating prey responses to predation risk at multiple scales.
- Full Text:
- Date Issued: 2014
- Authors: Leaver, Jessica
- Date: 2014
- Subjects: Endangered species -- South Africa -- Eastern Cape , Predatory animals -- Control -- South Africa -- Eastern Cape
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/6570 , vital:21113
- Description: Eland Tragelaphus oryx are the largest and slowest African antelope, falling within the preferred weight range of the prey of lions Panthera leo. Little is known, however, about the antipredatory strategies employed by eland. Rapid population declines in several small reserves following the reintroduction of lions suggest that the antipredatory strategies of eland may be compromised in spatially limited areas. This emphasises the need for research aimed at investigating how eland respond to lions, particularly in the spatial context, given that lions are increasingly being reintroduced into small reserves in South Africa. This study aimed to investigate lion-eland interactions at multiple scales and determine where on the landscape eland were vulnerable to predation. Adult female eland (n = 3 per site) in breeding herds were collared with GPS satellite collars in two study sites; the Nyathi section of Addo Elephant National Park (Nyathi) and Mountain Zebra National Park (MZNP) in the Eastern Cape, South Africa. A reintroduced population of lions, comprising two males and one female, was present in each study site, with individuals fitted with GPS satellite collars. At a broad spatiotemporal scale, eland did not avoid lions and there was considerable overlap between eland and lion home ranges in both study sites. At a finer spatiotemporal scale however, eland and lion space use was asynchronous in time, except in the case of the female lion in Nyathi where there was considerable overlap at the finest temporal scale investigated (i.e. monthly). Herd-associated eland in Nyathi were killed most frequently in areas associated with high long-term use by the female lion, showing that failure to avoid the female lion at a fine scale increased predation risk for eland. Secondly, eland in Nyathi were killed most frequently in habitat types of intermediate structural density (i.e. mixed habitats), which limited the viewshed of eland but presumably offered increased forage. This habitat type was selected for by eland, despite it being associated with a higher level of predation risk. This suggested that eland in Nyathi traded off safety for forage. In MZNP, predation of herd-associated eland was low which reflected the limited spatial overlap between eland and lion at a fine scale in this reserve. In Nyathi, but not in MZNP, eland responded to lions within 1.5 km by increasing their movement rate, with this response particularly strong at night. The findings of this study show that eland responses to lions are scale-dependent and site-specific. Furthermore, eland responses to lions were shown to be lion gender-specific. This study has increased our understanding of the antipredatory behaviours of eland and demonstrated the importance of investigating prey responses to predation risk at multiple scales.
- Full Text:
- Date Issued: 2014
Polynuclear biomolecular-supported rare earth coordination compounds : towards a new generation of lanthanide-based drugs
- Authors: Clark, Candyce
- Date: 2014
- Subjects: Polyols , Hydroxyl group , Rare earth metals
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10439 , http://hdl.handle.net/10948/d1020778
- Description: Galactitol and cis,cis,cis-1,3,5-cyclohexanetriol are polyols that are ideal examples of model compounds for ligands with lanthanide ions as they have their hydroxyl groups in favourable steric arrangement. Several complexes were synthesised with both lanthanide chloride and lanthanide nitrate salts with galactitol, and a variety of structures, both polymeric and monomeric, were observed. In all these complexes, galactitol acted as a bridging molecule between the lanthanide ions. A notable difference was the lanthanum chloride–galactitol complex that showed both chloride and galactitol bridging. The lanthanide nitrate salts formed only polymeric complexes with galactitol. Not all of the complexes showed nitrate ions coordinated to the metal centre, and in the neodymium nitrate– galactitol complex, which shows both monodentate and bidentate coordination of the nitrate groups. The coordination of the nitrate ions was confirmed using both XRD and IR analysis. Two complexes with lanthanide chloride salts and cis,cis,cis-1,3,5-cyclohexanetriol were synthesised and analysed. Lanthanum chloride formed a polymeric complex, which showed extensive chloride bridging between the metal centres. Praseodymium chloride formed a dimeric complex. All complexes were analysed with single-crystal X-ray diffraction, 1H NMR, 13C NMR and IR spectroscopy.
- Full Text:
- Date Issued: 2014
- Authors: Clark, Candyce
- Date: 2014
- Subjects: Polyols , Hydroxyl group , Rare earth metals
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10439 , http://hdl.handle.net/10948/d1020778
- Description: Galactitol and cis,cis,cis-1,3,5-cyclohexanetriol are polyols that are ideal examples of model compounds for ligands with lanthanide ions as they have their hydroxyl groups in favourable steric arrangement. Several complexes were synthesised with both lanthanide chloride and lanthanide nitrate salts with galactitol, and a variety of structures, both polymeric and monomeric, were observed. In all these complexes, galactitol acted as a bridging molecule between the lanthanide ions. A notable difference was the lanthanum chloride–galactitol complex that showed both chloride and galactitol bridging. The lanthanide nitrate salts formed only polymeric complexes with galactitol. Not all of the complexes showed nitrate ions coordinated to the metal centre, and in the neodymium nitrate– galactitol complex, which shows both monodentate and bidentate coordination of the nitrate groups. The coordination of the nitrate ions was confirmed using both XRD and IR analysis. Two complexes with lanthanide chloride salts and cis,cis,cis-1,3,5-cyclohexanetriol were synthesised and analysed. Lanthanum chloride formed a polymeric complex, which showed extensive chloride bridging between the metal centres. Praseodymium chloride formed a dimeric complex. All complexes were analysed with single-crystal X-ray diffraction, 1H NMR, 13C NMR and IR spectroscopy.
- Full Text:
- Date Issued: 2014
Potential for human exposure to Beta-N-methylamino-L-alanine in a freshwater system
- Authors: Scott, Laura Louise
- Date: 2014
- Subjects: Water quality biological assessment , Cyanobacteria , Neurotoxic agents
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/5159 , vital:20816
- Description: β-N-methylamino-L-alanine (BMAA) is a non-proteinogenic amino acid associated with human neurodegenerative diseases. The content of BMAA in cyanobacteria is modulated by nitrogen in laboratory cultures. In order to evaluate the potential for human exposure, the nitrogen modulation of BMAA content needed verification in a natural environment. In accordance with laboratory culture studies, data presented in this study show that combined nitrogen was the most significant modulator of both cellular microcystin (MC) and BMAA content in phytoplankton in an environmental cyanobacterial bloom. While BMAA is produced upon nitrogen deprivation, MC is only produced at a specific nitrogen threshold where the rate of increase of nitrogen in the cell exceeds the carbon fixation rate. As BMAA and MC were detected in phytoplankton sourced from the Hartbeespoort Dam reservoir, the transfer of these cyanotoxins to organisms of higher trophic levels was investigated. Both BMAA and MC were detected at high concentrations in the liver and muscle tissue of fish sourced from the Hartbeespoort Dam reservoir indicating that consumption of fish from this reservoir constitutes a serious risk of exposure to cyanotoxins. In addition to the dietary exposure route to BMAA, two recent studies reported a correlation between Amyotrophic Lateral Sclerosis (ALS) incidence and the potential for aerosol exposure to cyanobacteria. With the absence of any evidence of the systemic distribution of BMAA following inhalation, an evaluation of the potential exposure risk associated with living in close proximity to this reservoir was deemed premature. A laboratory experiment investigating the effect and systemic fate of inhaled aerosolised BMAA was therefore conducted in order to determine the feasibility of inhalation as a potential BMAA exposure route. Data from the rat inhalation exposure study, however, showed that in rats BMAA inhalation may not constitute a significant mechanism of toxicity at environmental BMAA levels.
- Full Text:
- Date Issued: 2014
- Authors: Scott, Laura Louise
- Date: 2014
- Subjects: Water quality biological assessment , Cyanobacteria , Neurotoxic agents
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/5159 , vital:20816
- Description: β-N-methylamino-L-alanine (BMAA) is a non-proteinogenic amino acid associated with human neurodegenerative diseases. The content of BMAA in cyanobacteria is modulated by nitrogen in laboratory cultures. In order to evaluate the potential for human exposure, the nitrogen modulation of BMAA content needed verification in a natural environment. In accordance with laboratory culture studies, data presented in this study show that combined nitrogen was the most significant modulator of both cellular microcystin (MC) and BMAA content in phytoplankton in an environmental cyanobacterial bloom. While BMAA is produced upon nitrogen deprivation, MC is only produced at a specific nitrogen threshold where the rate of increase of nitrogen in the cell exceeds the carbon fixation rate. As BMAA and MC were detected in phytoplankton sourced from the Hartbeespoort Dam reservoir, the transfer of these cyanotoxins to organisms of higher trophic levels was investigated. Both BMAA and MC were detected at high concentrations in the liver and muscle tissue of fish sourced from the Hartbeespoort Dam reservoir indicating that consumption of fish from this reservoir constitutes a serious risk of exposure to cyanotoxins. In addition to the dietary exposure route to BMAA, two recent studies reported a correlation between Amyotrophic Lateral Sclerosis (ALS) incidence and the potential for aerosol exposure to cyanobacteria. With the absence of any evidence of the systemic distribution of BMAA following inhalation, an evaluation of the potential exposure risk associated with living in close proximity to this reservoir was deemed premature. A laboratory experiment investigating the effect and systemic fate of inhaled aerosolised BMAA was therefore conducted in order to determine the feasibility of inhalation as a potential BMAA exposure route. Data from the rat inhalation exposure study, however, showed that in rats BMAA inhalation may not constitute a significant mechanism of toxicity at environmental BMAA levels.
- Full Text:
- Date Issued: 2014
Prevalence and molecular epidemiology of extended-spectrum beta-lactamase-producing and carbapenem-resistant enterobacteriaceae, acinetobacter baumannii and pseudomonas aeruginosa in Port Elizabeth
- Authors: Gqunta, Kwanele
- Date: 2014
- Subjects: Beta lactamases , Enterobacteriaceae -- South Africa -- Port Elizabeth
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10353 , http://hdl.handle.net/10948/d1020944
- Description: Multidrug resistant (MDR) extended-spectrum β-lactamase (ESBL)-producing and carbapenem-resistant Gram-negative bacteria have become an international health issue limiting treatment options. The objective of this study was to determine the prevalence of carbapenem-susceptible (CS) and carbapenem-resistant (CR) Enterobacteriaceae, Acinetobacter baumannii and Pseudomonas aeruginosa and investigate clinical isolates for their resistant genes/ determinants. A total of 98 bacterial isolates (59 CS and 39 CR) were collected between February 2012 and February 2013 at NHLS, after being recovered from various clinical specimens from PE hospital complex. Antimicrobial susceptibility testing was performed using the VITEK 2® system, E-test and microbroth dilution method. PCR and DNA sequencing were used to investigate: (i) ESBLs: CTX-M, TEM, SHV and OXA-1; (ii) plasmidmediated quinolone resistance (PMQR) genes: qnrA, qnrB, qnrC, qnrD, qnrS, qepA and aac(6’)-lb-cr; (iii) Escherichia coli sequence type 131 (ST131); (iv) carbapenemases: NDM, VIM, IMP, KPC, BIC, SME, IMI, NMC-A, GES, OXA-23, OXA-24, OXA-48, OXA-51 and OXA-58; and (v) insertion sequence ISAba1 upstream blaOXA-23/-24/-51/-58 genes. Porin loss in CR isolates was determined by SDSPAGE while genetic relatedness between E. coli ST131 isolates was determined by pulsed-field gel electrophoresis (PFGE). MDR ESBL-producing Enterobacteriaceae (mainly K. pneumoniae) and CR A. baumannii isolates were recovered from neonatal/ infant specimens. The majority of CS and CR isolates were MDR, possessing multiple ESBL genotypes (CTX-M, TEM, SHV and OXA-1). ESBL variants identified included: CTX-M-1, CTX-M-3, CTX-M-15, CTX-M-22, CTX-M-9, CTX-M-14, TEM-1, SHV-1, SHV-11 and OXA-1. PMQRs identified included: aac(6’)- lb-cr, qnrB1, qnrB2, qnrB13 and qnrS1. Twelve of 21 (57.1 percent) E. coli isolates belonged to the ST131 clonal complex and were genetically diverse, mainly producing CTX-M-15. Carbapenem resistance mechanisms identified included: (i) OXA-23 preceded by ISAba1 in 10 A. baumannii and 2 P. aeruginosa isolates; (ii) IMI-2 carbapenemase in an E. asburiae isolate; and (iii) combination of porin loss and ESBL production in 1 K. pneumoniae and 1 E. coli isolate. This is the first report in South Africa describing the occurrence of CTX-M-9, CTX-M-22 and IMI-2 among Enterobacteriaceae; CTX-M-15 in A. baumannii; and OXA-23 in combination with OXA-51 in P. aeruginosa. However, resistance determinants could not be detected for 24 carbapenem-resistant isolates which requires further investigation.
- Full Text:
- Date Issued: 2014
- Authors: Gqunta, Kwanele
- Date: 2014
- Subjects: Beta lactamases , Enterobacteriaceae -- South Africa -- Port Elizabeth
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10353 , http://hdl.handle.net/10948/d1020944
- Description: Multidrug resistant (MDR) extended-spectrum β-lactamase (ESBL)-producing and carbapenem-resistant Gram-negative bacteria have become an international health issue limiting treatment options. The objective of this study was to determine the prevalence of carbapenem-susceptible (CS) and carbapenem-resistant (CR) Enterobacteriaceae, Acinetobacter baumannii and Pseudomonas aeruginosa and investigate clinical isolates for their resistant genes/ determinants. A total of 98 bacterial isolates (59 CS and 39 CR) were collected between February 2012 and February 2013 at NHLS, after being recovered from various clinical specimens from PE hospital complex. Antimicrobial susceptibility testing was performed using the VITEK 2® system, E-test and microbroth dilution method. PCR and DNA sequencing were used to investigate: (i) ESBLs: CTX-M, TEM, SHV and OXA-1; (ii) plasmidmediated quinolone resistance (PMQR) genes: qnrA, qnrB, qnrC, qnrD, qnrS, qepA and aac(6’)-lb-cr; (iii) Escherichia coli sequence type 131 (ST131); (iv) carbapenemases: NDM, VIM, IMP, KPC, BIC, SME, IMI, NMC-A, GES, OXA-23, OXA-24, OXA-48, OXA-51 and OXA-58; and (v) insertion sequence ISAba1 upstream blaOXA-23/-24/-51/-58 genes. Porin loss in CR isolates was determined by SDSPAGE while genetic relatedness between E. coli ST131 isolates was determined by pulsed-field gel electrophoresis (PFGE). MDR ESBL-producing Enterobacteriaceae (mainly K. pneumoniae) and CR A. baumannii isolates were recovered from neonatal/ infant specimens. The majority of CS and CR isolates were MDR, possessing multiple ESBL genotypes (CTX-M, TEM, SHV and OXA-1). ESBL variants identified included: CTX-M-1, CTX-M-3, CTX-M-15, CTX-M-22, CTX-M-9, CTX-M-14, TEM-1, SHV-1, SHV-11 and OXA-1. PMQRs identified included: aac(6’)- lb-cr, qnrB1, qnrB2, qnrB13 and qnrS1. Twelve of 21 (57.1 percent) E. coli isolates belonged to the ST131 clonal complex and were genetically diverse, mainly producing CTX-M-15. Carbapenem resistance mechanisms identified included: (i) OXA-23 preceded by ISAba1 in 10 A. baumannii and 2 P. aeruginosa isolates; (ii) IMI-2 carbapenemase in an E. asburiae isolate; and (iii) combination of porin loss and ESBL production in 1 K. pneumoniae and 1 E. coli isolate. This is the first report in South Africa describing the occurrence of CTX-M-9, CTX-M-22 and IMI-2 among Enterobacteriaceae; CTX-M-15 in A. baumannii; and OXA-23 in combination with OXA-51 in P. aeruginosa. However, resistance determinants could not be detected for 24 carbapenem-resistant isolates which requires further investigation.
- Full Text:
- Date Issued: 2014
Problems experienced by project managers on housing projects
- Mtshekexe, Ntombesibini Octavia
- Authors: Mtshekexe, Ntombesibini Octavia
- Date: 2014
- Subjects: Project management , Housing rehabilitation , Public housing -- South Africa , Building -- Superintendence
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:9675 , http://hdl.handle.net/10948/d1020930
- Description: Housing projects are amongst the South African (SA) Government’s major focus points with reference to budgeting for its financial years. The delivery of these housing projects is taking place at a slower rate than anticipated due to the problems experienced in the processes involved in their management. The project management shortcomings are a major setback with reference to the delivery of houses to the communities. It is, however, stated by the Constitution of the Republic of South Africa (RSA) that every South African citizen has a right to housing and that the Local Government, as the closest entity to communities, must do whatever it possibly can to ensure timeous service delivery to its communities. The objective of this research is to ascertain the nature and extent of project management problems experienced by municipal project managers, the impact thereof and potential solutions to the identified problems. The study is intended to advise on possible ways to address project management problems arising during the implementation of housing projects in the Nelson Mandela Bay Municipality (NMBM) through investigation and analysis of information gathered in both theory and practice. Project management is a process of controlling the achievement of project objectives through the application of knowledge, skills, tools and techniques. For a housing project the main objective is to deliver safe, quality houses on time and within budget. Problems which hinder the delivery of housing projects relate to cost, time and the quality of housing projects delivered. The fact that these key project objectives are not met needs to be addressed urgently in order to improve the housing delivery. The literature reviewed and the feedback from the surveys; indicate that these problems have a vast impact on housing projects. The survey also reveals that it is not only housing Project Managers (PMs) that are unable to perform well, but also other parties involved in the project management of housing projects and which play a great role in project management failures of housing projects. Some of these parties are consultants and contractors. The lack of performance by project managers affects the delivery of houses negatively in the NMBM.
- Full Text:
- Date Issued: 2014
- Authors: Mtshekexe, Ntombesibini Octavia
- Date: 2014
- Subjects: Project management , Housing rehabilitation , Public housing -- South Africa , Building -- Superintendence
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:9675 , http://hdl.handle.net/10948/d1020930
- Description: Housing projects are amongst the South African (SA) Government’s major focus points with reference to budgeting for its financial years. The delivery of these housing projects is taking place at a slower rate than anticipated due to the problems experienced in the processes involved in their management. The project management shortcomings are a major setback with reference to the delivery of houses to the communities. It is, however, stated by the Constitution of the Republic of South Africa (RSA) that every South African citizen has a right to housing and that the Local Government, as the closest entity to communities, must do whatever it possibly can to ensure timeous service delivery to its communities. The objective of this research is to ascertain the nature and extent of project management problems experienced by municipal project managers, the impact thereof and potential solutions to the identified problems. The study is intended to advise on possible ways to address project management problems arising during the implementation of housing projects in the Nelson Mandela Bay Municipality (NMBM) through investigation and analysis of information gathered in both theory and practice. Project management is a process of controlling the achievement of project objectives through the application of knowledge, skills, tools and techniques. For a housing project the main objective is to deliver safe, quality houses on time and within budget. Problems which hinder the delivery of housing projects relate to cost, time and the quality of housing projects delivered. The fact that these key project objectives are not met needs to be addressed urgently in order to improve the housing delivery. The literature reviewed and the feedback from the surveys; indicate that these problems have a vast impact on housing projects. The survey also reveals that it is not only housing Project Managers (PMs) that are unable to perform well, but also other parties involved in the project management of housing projects and which play a great role in project management failures of housing projects. Some of these parties are consultants and contractors. The lack of performance by project managers affects the delivery of houses negatively in the NMBM.
- Full Text:
- Date Issued: 2014
Synthesis of fluorescent polymers with pendant triazole-quinoline groups via raft polymerization
- Ngororabanga, Jean Marie Vianney
- Authors: Ngororabanga, Jean Marie Vianney
- Date: 2014
- Subjects: Fluorescent polymers , Polymerization
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10440 , http://hdl.handle.net/10948/d1020798
- Description: In this study, fluorescent polymers with pendant quinoline groups were synthesized by reversible addition-fragmentation chain transfer polymerization (RAFT) from a fluorescent quinoline-based vinyl monomer, synthesized in multiple steps from p-nitroaniline and crotonaldehyde. The structures of the synthesized vinyl monomer and polymers were confirmed by NMR and FT-IR spectroscopy, X-ray studies and modeling stdies. The photophysical properties of the synthesized quinoline compounds and resulting polymers were investigated. In order to evaluate the binding potential of our quinoline-based polymer in the presence of transition metal ions, preliminary studies on a complexation of quinoline-based polymers with Zn, Cd, Hg, Fe, and Ni were carried out. The investigation of fluorescence properties of the complexes showed fluorescence quenching for Fe(II), and fluorescence enhancement for the remaining ions [Zn(II), Cd(II), Hg(II), and Ni(II)].
- Full Text:
- Date Issued: 2014
- Authors: Ngororabanga, Jean Marie Vianney
- Date: 2014
- Subjects: Fluorescent polymers , Polymerization
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10440 , http://hdl.handle.net/10948/d1020798
- Description: In this study, fluorescent polymers with pendant quinoline groups were synthesized by reversible addition-fragmentation chain transfer polymerization (RAFT) from a fluorescent quinoline-based vinyl monomer, synthesized in multiple steps from p-nitroaniline and crotonaldehyde. The structures of the synthesized vinyl monomer and polymers were confirmed by NMR and FT-IR spectroscopy, X-ray studies and modeling stdies. The photophysical properties of the synthesized quinoline compounds and resulting polymers were investigated. In order to evaluate the binding potential of our quinoline-based polymer in the presence of transition metal ions, preliminary studies on a complexation of quinoline-based polymers with Zn, Cd, Hg, Fe, and Ni were carried out. The investigation of fluorescence properties of the complexes showed fluorescence quenching for Fe(II), and fluorescence enhancement for the remaining ions [Zn(II), Cd(II), Hg(II), and Ni(II)].
- Full Text:
- Date Issued: 2014
The coordination and extractive chemistry of the later 3d transition metal ions with N, N'-donor imidazole-based ligands
- Authors: Moleko, Pulleng
- Date: 2014
- Subjects: Solvent extraction , Coordination compounds
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/8382 , vital:26352
- Description: The application of bidentate N,N'-donor ligands, such as 2,2'-biimidazole (BIIMH2) and 2,2'-pyridylimidazole (PIMH) and (1H-benzimidazol-2yl)-N-methylmethanamine (BIMAH), in the solvent extraction of base metal ions from an acidic sulfate/sulfonate medium was investigated. PIMH and BIMAH showed selectivity for Ni(II) with the only interfering ion being Cu(II) in the pH range 1.2-1.8 but BIIMH2 lacked selectivity. The extraction patterns observed were influenced by stereochemical aspects, and this agreed well with the envisaged design of nickel(II)-specific extractants through stereochemical “tailor-making” which is proposed in this study. The extraction patterns were explained from a coordination chemistry point of view using spectroscopic analysis and single crystal X-ray analysis to diagnose the geometry of the complexes formed from the interaction of the base metal ions with the ligands. The formation of the trigonal bipyrimidal [Cu(PIM)2(H2O)](SO4) complex, with a water molecule coordinated, while nickel(II) forms a square planar bisPIMH was put forward as the reason for extraction pattern observed with this ligand. Cobalt(II) also forms a bisPIMH complex but has two water molecules coordinated in the formation of a distorted octahedral complex, and this results in less extractable species. A similar observation as for PIMH was noticed in BIMAH complexation reactions. The BIIMH2 complexes were found to be distorted octahedral, through the bis-coordination of BIIMH2 and two sulfonate ions, resulting in lack of pH-metric separation of the later 3d metal ions. The stability constants data was in agreement with what was observed in the solvent extraction and coordination chemistry studies for the three ligand systems.
- Full Text:
- Date Issued: 2014
- Authors: Moleko, Pulleng
- Date: 2014
- Subjects: Solvent extraction , Coordination compounds
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/8382 , vital:26352
- Description: The application of bidentate N,N'-donor ligands, such as 2,2'-biimidazole (BIIMH2) and 2,2'-pyridylimidazole (PIMH) and (1H-benzimidazol-2yl)-N-methylmethanamine (BIMAH), in the solvent extraction of base metal ions from an acidic sulfate/sulfonate medium was investigated. PIMH and BIMAH showed selectivity for Ni(II) with the only interfering ion being Cu(II) in the pH range 1.2-1.8 but BIIMH2 lacked selectivity. The extraction patterns observed were influenced by stereochemical aspects, and this agreed well with the envisaged design of nickel(II)-specific extractants through stereochemical “tailor-making” which is proposed in this study. The extraction patterns were explained from a coordination chemistry point of view using spectroscopic analysis and single crystal X-ray analysis to diagnose the geometry of the complexes formed from the interaction of the base metal ions with the ligands. The formation of the trigonal bipyrimidal [Cu(PIM)2(H2O)](SO4) complex, with a water molecule coordinated, while nickel(II) forms a square planar bisPIMH was put forward as the reason for extraction pattern observed with this ligand. Cobalt(II) also forms a bisPIMH complex but has two water molecules coordinated in the formation of a distorted octahedral complex, and this results in less extractable species. A similar observation as for PIMH was noticed in BIMAH complexation reactions. The BIIMH2 complexes were found to be distorted octahedral, through the bis-coordination of BIIMH2 and two sulfonate ions, resulting in lack of pH-metric separation of the later 3d metal ions. The stability constants data was in agreement with what was observed in the solvent extraction and coordination chemistry studies for the three ligand systems.
- Full Text:
- Date Issued: 2014