Semantic segmentation of astronomical radio images: a computer vision approach
- Authors: Kupa, Ramadimetse Sydil
- Date: 2023-03-29
- Subjects: Semantic segmentation , Radio astronomy , Radio telescopes , Deep learning (Machine learning) , Image segmentation
- Language: English
- Type: Academic theses , Master's theses , text
- Identifier: http://hdl.handle.net/10962/422378 , vital:71937
- Description: The new generation of radio telescopes, such as the MeerKAT, ASKAP (Australian Square Kilometre Array Pathfinder) and the future Square Kilometre Array (SKA), are expected to produce vast amounts of data and images in the petabyte region. Therefore, the amount of incoming data at a specific point in time will overwhelm any current traditional data analysis method being deployed. Deep learning architectures have been applied in many fields, such as, in computer vision, machine vision, natural language processing, social network filtering, speech recognition, machine translation, bioinformatics, medical image analysis, and board game programs. They have produced results which are comparable to human expert performance. Hence, it is appealing to apply it to radio astronomy data. Image segmentation is one such area where deep learning techniques are prominent. The images from the new generation of telescopes have a high density of radio sources, making it difficult to classify the sources in the image. Identifying and segmenting sources from radio images is a pre-processing step that occurs before sources are put into different classes. There is thus a need for automatic segmentation of the sources from the images before they can be classified. This work uses the Unet architecture (originally developed for biomedical image segmentation) to segment radio sources from radio astronomical images with 99.8% accuracy. After segmenting the sources we use OpenCV tools to detect the sources on the mask images, then the detection is translated to the original image where borders are drawn around each detected source. This process automates and simplifies the pre-processing of images for classification tools and any other post-processing tool that requires a specific source as an input. , Thesis (MSc) -- Faculty of Science, Physics and Electronics, 2023
- Full Text:
- Date Issued: 2023-03-29
- Authors: Kupa, Ramadimetse Sydil
- Date: 2023-03-29
- Subjects: Semantic segmentation , Radio astronomy , Radio telescopes , Deep learning (Machine learning) , Image segmentation
- Language: English
- Type: Academic theses , Master's theses , text
- Identifier: http://hdl.handle.net/10962/422378 , vital:71937
- Description: The new generation of radio telescopes, such as the MeerKAT, ASKAP (Australian Square Kilometre Array Pathfinder) and the future Square Kilometre Array (SKA), are expected to produce vast amounts of data and images in the petabyte region. Therefore, the amount of incoming data at a specific point in time will overwhelm any current traditional data analysis method being deployed. Deep learning architectures have been applied in many fields, such as, in computer vision, machine vision, natural language processing, social network filtering, speech recognition, machine translation, bioinformatics, medical image analysis, and board game programs. They have produced results which are comparable to human expert performance. Hence, it is appealing to apply it to radio astronomy data. Image segmentation is one such area where deep learning techniques are prominent. The images from the new generation of telescopes have a high density of radio sources, making it difficult to classify the sources in the image. Identifying and segmenting sources from radio images is a pre-processing step that occurs before sources are put into different classes. There is thus a need for automatic segmentation of the sources from the images before they can be classified. This work uses the Unet architecture (originally developed for biomedical image segmentation) to segment radio sources from radio astronomical images with 99.8% accuracy. After segmenting the sources we use OpenCV tools to detect the sources on the mask images, then the detection is translated to the original image where borders are drawn around each detected source. This process automates and simplifies the pre-processing of images for classification tools and any other post-processing tool that requires a specific source as an input. , Thesis (MSc) -- Faculty of Science, Physics and Electronics, 2023
- Full Text:
- Date Issued: 2023-03-29
Statistical Analysis of the Radio-Interferometric Measurement Equation, a derived adaptive weighting scheme, and applications to LOFAR-VLBI observation of the Extended Groth Strip
- Authors: Bonnassieux, Etienne
- Date: 2019
- Subjects: Radio astronomy , Astrophysics , Astrophysics -- Instruments -- Calibration , Imaging systems in astronomy , Radio interferometers , Radio telescopes , Astronomy -- Observations
- Language: English
- Type: text , Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10962/93789 , vital:30942
- Description: J.R.R Tolkien wrote, in his Mythopoeia, that “He sees no stars who does not see them first, of living silver made that sudden burst, to flame like flowers beneath the ancient song”. In his defense of myth-making, he formulates the argument that the attribution of meaning is an act of creation - that “trees are not ‘trees’ until so named and seen” - and that this capacity for creation defines the human creature. The scientific endeavour, in this context, can be understood as a social expression of a fundamental feature of humanity, and from this endeavour flows much understanding. This thesis, one thread among many, focuses on the study of astronomical objects as seen by the radio waves they emit. What are radio waves? Electromagnetic waves were theorised by James Clerk Maxwell (Maxwell 1864) in his great theoretical contribution to modern physics, their speed matching the speed of light as measured by Ole Christensen R0mer and, later, James Bradley. It was not until Heinrich Rudolf Hertz’s 1887 experiment that these waves were measured in a laboratory, leading to the dawn of radio communications - and, later, radio astronomy. The link between radio waves and light was one of association: light is known to behave as a wave (Young double-slit experiment), with the same propagation speed as electromagnetic radiation. Light “proper” is also known to exist beyond the optical regime: Herschel’s experiment shows that when diffracted through a prism, sunlight warms even those parts of a desk which are not observed to be lit (first evidence of infrared light). The link between optical light and unseen electromagnetic radiation is then an easy step to make, and one confirmed through countless technological applications (e.g. optical fiber to name but one). And as soon as this link is established, a question immediately comes to the mind of the astronomer: what does the sky, our Universe, look like to the radio “eye”? Radio astronomy has a short but storied history: from Karl Jansky’s serendipitous observation of the centre of the Milky Way, which outshines our Sun in the radio regime, in 1933, to Grote Reber’s hand-built back-yard radio antenna in 1937, which successfully detected radio emission from the Milky Way itself, to such monumental projects as the Square Kilometer Array and its multiple pathfinders, it has led to countless discoveries and the opening of a truly new window on the Universe. The work presented in this thesis is a contribution to this discipline - the culmination of three years of study, which is a rather short time to get a firm grasp of radio interferometry both in theory and in practice. The need for robust, automated methods - which are improving daily, thanks to the tireless labour of the scientists in the field - is becoming ever stronger as the SKA approaches, looming large on the horizon; but even today, in the precursor era of LOFAR, MeerKAT and other pathfinders, it is keenly felt. When I started my doctorate, the sheer scale of the task at hand felt overwhelming - to actually be able to contribute to its resolution seemed daunting indeed! Thankfully, as the saying goes, no society sets for itself material goals which it cannot achieve. This thesis took place at an exciting time for radio interferometry: at the start of my doctorate, the LOFAR international stations were - to my knowledge - only beginning to be used, and even then, only tentatively; MeerKAT had not yet shown its first light; the techniques used throughout my work were still being developed. At the time of writing, great strides have been made. One of the greatest technical challenges of LOFAR - imaging using the international stations - is starting to become reality. This technical challenge is the key problem that this thesis set out to address. While we only achieved partial success so far, it is a testament to the difficulty of the task that it is not yet truly resolved. One of the major results of this thesis is a model of a bright resolved source near a famous extragalactic field: properly modeling this source not only allows the use of international LOFAR stations, but also grants deeper access to the extragalactic field itself, which is otherwise polluted by the 3C source’s sidelobes. This result was only achieved thanks to the other major result of this thesis: the development of a theoretical framework with which to better understand the effect of calibration errors on images made from interferometric data, and an algorithm to strongly mitigate them. The structure of this manuscript is as follows: we begin with an introduction to radio interferometry, LOFAR, and the emission mechanisms which dominate for our field of interest. These introductions are primarily intended to give a brief overview of the technical aspects of the data reduced in this thesis. We follow with an overview of the Measurement Equation formalism, which underpins our theoretical work. This is the keystone of this thesis. We then show the theoretical work that was developed as part of the research work done during the doctorate - which was published in Astronomy & Astrophysics. Its practical application - a quality-based weighting scheme - is used throughout our data reduction. This data reduction is the next topic of this thesis: we contextualise the scientific interest of the data we reduce, and explain both the methods and the results we achieve.
- Full Text:
- Date Issued: 2019
- Authors: Bonnassieux, Etienne
- Date: 2019
- Subjects: Radio astronomy , Astrophysics , Astrophysics -- Instruments -- Calibration , Imaging systems in astronomy , Radio interferometers , Radio telescopes , Astronomy -- Observations
- Language: English
- Type: text , Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10962/93789 , vital:30942
- Description: J.R.R Tolkien wrote, in his Mythopoeia, that “He sees no stars who does not see them first, of living silver made that sudden burst, to flame like flowers beneath the ancient song”. In his defense of myth-making, he formulates the argument that the attribution of meaning is an act of creation - that “trees are not ‘trees’ until so named and seen” - and that this capacity for creation defines the human creature. The scientific endeavour, in this context, can be understood as a social expression of a fundamental feature of humanity, and from this endeavour flows much understanding. This thesis, one thread among many, focuses on the study of astronomical objects as seen by the radio waves they emit. What are radio waves? Electromagnetic waves were theorised by James Clerk Maxwell (Maxwell 1864) in his great theoretical contribution to modern physics, their speed matching the speed of light as measured by Ole Christensen R0mer and, later, James Bradley. It was not until Heinrich Rudolf Hertz’s 1887 experiment that these waves were measured in a laboratory, leading to the dawn of radio communications - and, later, radio astronomy. The link between radio waves and light was one of association: light is known to behave as a wave (Young double-slit experiment), with the same propagation speed as electromagnetic radiation. Light “proper” is also known to exist beyond the optical regime: Herschel’s experiment shows that when diffracted through a prism, sunlight warms even those parts of a desk which are not observed to be lit (first evidence of infrared light). The link between optical light and unseen electromagnetic radiation is then an easy step to make, and one confirmed through countless technological applications (e.g. optical fiber to name but one). And as soon as this link is established, a question immediately comes to the mind of the astronomer: what does the sky, our Universe, look like to the radio “eye”? Radio astronomy has a short but storied history: from Karl Jansky’s serendipitous observation of the centre of the Milky Way, which outshines our Sun in the radio regime, in 1933, to Grote Reber’s hand-built back-yard radio antenna in 1937, which successfully detected radio emission from the Milky Way itself, to such monumental projects as the Square Kilometer Array and its multiple pathfinders, it has led to countless discoveries and the opening of a truly new window on the Universe. The work presented in this thesis is a contribution to this discipline - the culmination of three years of study, which is a rather short time to get a firm grasp of radio interferometry both in theory and in practice. The need for robust, automated methods - which are improving daily, thanks to the tireless labour of the scientists in the field - is becoming ever stronger as the SKA approaches, looming large on the horizon; but even today, in the precursor era of LOFAR, MeerKAT and other pathfinders, it is keenly felt. When I started my doctorate, the sheer scale of the task at hand felt overwhelming - to actually be able to contribute to its resolution seemed daunting indeed! Thankfully, as the saying goes, no society sets for itself material goals which it cannot achieve. This thesis took place at an exciting time for radio interferometry: at the start of my doctorate, the LOFAR international stations were - to my knowledge - only beginning to be used, and even then, only tentatively; MeerKAT had not yet shown its first light; the techniques used throughout my work were still being developed. At the time of writing, great strides have been made. One of the greatest technical challenges of LOFAR - imaging using the international stations - is starting to become reality. This technical challenge is the key problem that this thesis set out to address. While we only achieved partial success so far, it is a testament to the difficulty of the task that it is not yet truly resolved. One of the major results of this thesis is a model of a bright resolved source near a famous extragalactic field: properly modeling this source not only allows the use of international LOFAR stations, but also grants deeper access to the extragalactic field itself, which is otherwise polluted by the 3C source’s sidelobes. This result was only achieved thanks to the other major result of this thesis: the development of a theoretical framework with which to better understand the effect of calibration errors on images made from interferometric data, and an algorithm to strongly mitigate them. The structure of this manuscript is as follows: we begin with an introduction to radio interferometry, LOFAR, and the emission mechanisms which dominate for our field of interest. These introductions are primarily intended to give a brief overview of the technical aspects of the data reduced in this thesis. We follow with an overview of the Measurement Equation formalism, which underpins our theoretical work. This is the keystone of this thesis. We then show the theoretical work that was developed as part of the research work done during the doctorate - which was published in Astronomy & Astrophysics. Its practical application - a quality-based weighting scheme - is used throughout our data reduction. This data reduction is the next topic of this thesis: we contextualise the scientific interest of the data we reduce, and explain both the methods and the results we achieve.
- Full Text:
- Date Issued: 2019
Advanced radio interferometric simulation and data reduction techniques
- Authors: Makhathini, Sphesihle
- Date: 2018
- Subjects: Interferometry , Radio interferometers , Algorithms , Radio telescopes , Square Kilometre Array (Project) , Very Large Array (Observatory : N.M.) , Radio astronomy
- Language: English
- Type: text , Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10962/57348 , vital:26875
- Description: This work shows how legacy and novel radio Interferometry software packages and algorithms can be combined to produce high-quality reductions from modern telescopes, as well as end-to-end simulations for upcoming instruments such as the Square Kilometre Array (SKA) and its pathfinders. We first use a MeqTrees based simulations framework to quantify how artefacts due to direction-dependent effects accumulate with time, and the consequences of this accumulation when observing the same field multiple times in order to reach the survey depth. Our simulations suggest that a survey like LADUMA (Looking at the Distant Universe with MeerKAT Array), which aims to achieve its survey depth of 16 µJy/beam in a 72 kHz at 1.42 GHz by observing the same field for 1000 hours, will be able to reach its target depth in the presence of these artefacts. We also present stimela, a system agnostic scripting framework for simulating, processing and imaging radio interferometric data. This framework is then used to write an end-to-end simulation pipeline in order to quantify the resolution and sensitivity of the SKA1-MID telescope (the first phase of the SKA mid-frequency telescope) as a function of frequency, as well as the scale-dependent sensitivity of the telescope. Finally, a stimela-based reduction pipeline is used to process data of the field around the source 3C147, taken by the Karl G. Jansky Very Large Array (VLA). The reconstructed image from this reduction has a typical 1a noise level of 2.87 µJy/beam, and consequently a dynamic range of 8x106:1, given the 22.58 Jy/beam flux Density of the source 3C147.
- Full Text:
- Date Issued: 2018
- Authors: Makhathini, Sphesihle
- Date: 2018
- Subjects: Interferometry , Radio interferometers , Algorithms , Radio telescopes , Square Kilometre Array (Project) , Very Large Array (Observatory : N.M.) , Radio astronomy
- Language: English
- Type: text , Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10962/57348 , vital:26875
- Description: This work shows how legacy and novel radio Interferometry software packages and algorithms can be combined to produce high-quality reductions from modern telescopes, as well as end-to-end simulations for upcoming instruments such as the Square Kilometre Array (SKA) and its pathfinders. We first use a MeqTrees based simulations framework to quantify how artefacts due to direction-dependent effects accumulate with time, and the consequences of this accumulation when observing the same field multiple times in order to reach the survey depth. Our simulations suggest that a survey like LADUMA (Looking at the Distant Universe with MeerKAT Array), which aims to achieve its survey depth of 16 µJy/beam in a 72 kHz at 1.42 GHz by observing the same field for 1000 hours, will be able to reach its target depth in the presence of these artefacts. We also present stimela, a system agnostic scripting framework for simulating, processing and imaging radio interferometric data. This framework is then used to write an end-to-end simulation pipeline in order to quantify the resolution and sensitivity of the SKA1-MID telescope (the first phase of the SKA mid-frequency telescope) as a function of frequency, as well as the scale-dependent sensitivity of the telescope. Finally, a stimela-based reduction pipeline is used to process data of the field around the source 3C147, taken by the Karl G. Jansky Very Large Array (VLA). The reconstructed image from this reduction has a typical 1a noise level of 2.87 µJy/beam, and consequently a dynamic range of 8x106:1, given the 22.58 Jy/beam flux Density of the source 3C147.
- Full Text:
- Date Issued: 2018
Measuring the RFI environment of the South African SKA site
- Authors: Manners, Paul John
- Date: 2007
- Subjects: Radio telescopes , Radio telescopes -- South Africa , Radio astronomy , Radio astronomy -- South Africa , Square Kilometer Array (Spacecraft) , Radio -- Interference -- Measurement
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5474 , http://hdl.handle.net/10962/d1005259 , Radio telescopes , Radio telescopes -- South Africa , Radio astronomy , Radio astronomy -- South Africa , Square Kilometer Array (Spacecraft) , Radio -- Interference -- Measurement
- Description: The Square Kilometre Array (SKA) Project is an international effort to build the world’s largest radio telescope. It will be 100 times more sensitive than any other radio telescope currently in existence and will consist of thousands of dishes placed at baselines up to 3000 km. In addition to its increased sensitivity it will operate over a very wide frequency range (current specification is 100 MHz - 22 GHz) and will use frequency bands not primarily allocated to radio astronomy. Because of this the telescope needs to be located at a site with low levels of radio frequency interference (RFI). This implies a site that is remote and away from human activity. In bidding to host the SKA, South Africa was required to conduct an RFI survey at its proposed site for a period of 12 months. Apart from this core site, where more than half the SKA dishes may potentially be deployed, the measurement of remote sites in Southern Africa was also required. To conduct measurements at these sites, three mobile measurement systems were designed and built by the South African SKA Project. The design considerations, implementation and RFI measurements recorded during this campaign will be the focus for this dissertation.
- Full Text:
- Date Issued: 2007
- Authors: Manners, Paul John
- Date: 2007
- Subjects: Radio telescopes , Radio telescopes -- South Africa , Radio astronomy , Radio astronomy -- South Africa , Square Kilometer Array (Spacecraft) , Radio -- Interference -- Measurement
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5474 , http://hdl.handle.net/10962/d1005259 , Radio telescopes , Radio telescopes -- South Africa , Radio astronomy , Radio astronomy -- South Africa , Square Kilometer Array (Spacecraft) , Radio -- Interference -- Measurement
- Description: The Square Kilometre Array (SKA) Project is an international effort to build the world’s largest radio telescope. It will be 100 times more sensitive than any other radio telescope currently in existence and will consist of thousands of dishes placed at baselines up to 3000 km. In addition to its increased sensitivity it will operate over a very wide frequency range (current specification is 100 MHz - 22 GHz) and will use frequency bands not primarily allocated to radio astronomy. Because of this the telescope needs to be located at a site with low levels of radio frequency interference (RFI). This implies a site that is remote and away from human activity. In bidding to host the SKA, South Africa was required to conduct an RFI survey at its proposed site for a period of 12 months. Apart from this core site, where more than half the SKA dishes may potentially be deployed, the measurement of remote sites in Southern Africa was also required. To conduct measurements at these sites, three mobile measurement systems were designed and built by the South African SKA Project. The design considerations, implementation and RFI measurements recorded during this campaign will be the focus for this dissertation.
- Full Text:
- Date Issued: 2007
Modeling and measurement of torqued procession in radio pulsars
- Authors: Tiplady, Adrian John
- Date: 2005
- Subjects: Pulsars , Radio telescopes , Radio astronomy , Precession , Hartebeeshoek Radio Astronomy Observatory (HartRAO)
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:5475 , http://hdl.handle.net/10962/d1005260
- Description: The long term isolated pulsar monitoring program, which commenced in 1984 using the 26 m radio telescope at the Hartebeeshoek Radio Astronomy Observatory (HartRAO), has produced high resolution timing residual data over long timespans. This has enabled the analysis of observed spin down behaviour for 27 braking pulsars, most of which have dataspans longer than 14 years. The phenomenology of observed timing residuals of certain pulsars can be explained by pseudo periodic effects such as precession. Analytic and numerical models are developed to study the kinematic and dynamic behaviour of isolated but torqued precessing pulsars. The predicted timing residual behaviour of the models is characterised, and confronted with timing data from selected pulsars. Cyclic variations in the observed timing residuals of PSR B1642-03, PSR B1323-58 and PSR B1557-50 are fitted with a torqued precession model. The phenomenology of the observed timing behaviour of these pulsars can be explained by the precession models, but precise model fitting was not possible. This is not surprising given that the complexity of the pulsar systems is not completely described by the model. The extension of the pulsar monitoring program at HartRAO is used as motivation for the design and development of a new low cost, multi-purpose digital pulsar receiver. The instrument is implemented using a hybrid filterbank architecture, consisting of an analogue frontend and digital backend, to perform incoherent dedispersion. The design of a polyphase filtering system, which will consolidate multiple processing units into a single filtering solution, is discussed for future implementation.
- Full Text:
- Date Issued: 2005
- Authors: Tiplady, Adrian John
- Date: 2005
- Subjects: Pulsars , Radio telescopes , Radio astronomy , Precession , Hartebeeshoek Radio Astronomy Observatory (HartRAO)
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:5475 , http://hdl.handle.net/10962/d1005260
- Description: The long term isolated pulsar monitoring program, which commenced in 1984 using the 26 m radio telescope at the Hartebeeshoek Radio Astronomy Observatory (HartRAO), has produced high resolution timing residual data over long timespans. This has enabled the analysis of observed spin down behaviour for 27 braking pulsars, most of which have dataspans longer than 14 years. The phenomenology of observed timing residuals of certain pulsars can be explained by pseudo periodic effects such as precession. Analytic and numerical models are developed to study the kinematic and dynamic behaviour of isolated but torqued precessing pulsars. The predicted timing residual behaviour of the models is characterised, and confronted with timing data from selected pulsars. Cyclic variations in the observed timing residuals of PSR B1642-03, PSR B1323-58 and PSR B1557-50 are fitted with a torqued precession model. The phenomenology of the observed timing behaviour of these pulsars can be explained by the precession models, but precise model fitting was not possible. This is not surprising given that the complexity of the pulsar systems is not completely described by the model. The extension of the pulsar monitoring program at HartRAO is used as motivation for the design and development of a new low cost, multi-purpose digital pulsar receiver. The instrument is implemented using a hybrid filterbank architecture, consisting of an analogue frontend and digital backend, to perform incoherent dedispersion. The design of a polyphase filtering system, which will consolidate multiple processing units into a single filtering solution, is discussed for future implementation.
- Full Text:
- Date Issued: 2005
A 22 GHz radio telescope
- Authors: Mutch, Laurence Ian
- Date: 1976
- Subjects: Radio telescopes , Paraboloid , Radio astronomy
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5532 , http://hdl.handle.net/10962/d1012919
- Description: This thesis reports on the design, construction, testing and operation of the spectral line and continuum receivers built for the 22 GHz Radio Telescope. First results from 'the telescope were obtained and have been analysed to give an estimate of system efficiency. Tests have been performed on the front end and in particular on the 22 GHz mixer in order to determine the minimum detectable temperature. The Sun, Moon and major planets are sources suitable for antenna alignment and consequently a literature survey of emission at 22 GHz from elements of the Solar system has been made.
- Full Text:
- Date Issued: 1976
- Authors: Mutch, Laurence Ian
- Date: 1976
- Subjects: Radio telescopes , Paraboloid , Radio astronomy
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5532 , http://hdl.handle.net/10962/d1012919
- Description: This thesis reports on the design, construction, testing and operation of the spectral line and continuum receivers built for the 22 GHz Radio Telescope. First results from 'the telescope were obtained and have been analysed to give an estimate of system efficiency. Tests have been performed on the front end and in particular on the 22 GHz mixer in order to determine the minimum detectable temperature. The Sun, Moon and major planets are sources suitable for antenna alignment and consequently a literature survey of emission at 22 GHz from elements of the Solar system has been made.
- Full Text:
- Date Issued: 1976
- «
- ‹
- 1
- ›
- »