The effects of selected reference toxicants on embryonic development of the freshwater shrimp caridina nilotica (Decapoda: Atyidae)
- Authors: Ketse, Noziphiwo
- Date: 2007
- Subjects: Toxicity testing -- South Africa , Shrimp fisheries -- South Africa , Decapoda , Caridina , Water quality management -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:6025 , http://hdl.handle.net/10962/d1005367 , Toxicity testing -- South Africa , Shrimp fisheries -- South Africa , Decapoda , Caridina , Water quality management -- South Africa
- Description: Aquatic toxicity tests are increasingly being used in water resource management worldwide, and currently in South Africa, policy and legislation are being drafted to reflect this international trend. While standard toxicity test methods and test organisms are being considered to develop and set water quality guidelines and effluent discharge limits, it is not clear whether guidelines and discharge limits set using these standard test organisms will be sufficient to protect South Africa’s scarce water resources. As part of ongoing research to investigate the use of indigenous riverine organisms as toxicity test organisms a number of potential species have been identified, including the freshwater shrimp Caridina nilotica. For much of the history of aquatic toxicological data the bulk of the data has been generated by acute toxicity testing, based on short exposures and using mortality as the response end point. There are relatively few chronic, longterm tests with sub-lethal endpoints. However, it was recognized that information about longer exposure durations and non lethal response endpoints was needed, instead of mortality. Chronic tests can provide a more environmentally realistic measure of chemical toxicity than acute toxicity tests. Caridina nilotica has been identified as a potential standard toxicity test organism, as it is widely distributed, easy to find and it occurs in flowing waters. It is an indigenous species which can be easily cultured and maintained in the laboratory and is also ecologically important. Both adults and juveniles have been used successfully in acute toxicity tests at the Institute for Water Research (Rhodes University) and the ability to rear the organisms under laboratory conditions has allowed the development of chronic toxicity tests using C. nilotica. Chronic early life stage tests include continuous exposure of the early life stages, which are presumed to be the most sensitive for aquatic organisms. This study reports on the embryonic development of C. nilotica at the culture temperature of 24⁰C. Morphological developmental stages were monitored and measured and 7 developmental stages were identified. Based on the measurements of the features that were identified, toxicity tests using the reference chemicals sodium chloride (NaCl), sodium sulphate (Na₂SO₄) and cadmium chloride (CdCl₂) were undertaken to test the suitability of C. nilotica embryonic development for chronic toxicity tests for use in water resource management. The length, width, length:width ratios and area of the features decreased in size when exposed to the chemicals. The Lowest Observed Effect Concentration (LOEC) values were 2000mg/L for Na₂SO₄, 3000mg/L for NaCl and 0.31mg/L for CdCl₂. The No Observed Effect Concentration (NOEC) values were 1000mg/L for Na₂SO₄, 2000mg/L for NaCl and <0.31mg/L for CdCl₂. Further research on the teratogenic effects of single chemicals and industrial effluent on developing C. nilotica embryos needs to be undertaken in order to evaluate the described test protocol for use in water resource management.
- Full Text:
- Date Issued: 2007
- Authors: Ketse, Noziphiwo
- Date: 2007
- Subjects: Toxicity testing -- South Africa , Shrimp fisheries -- South Africa , Decapoda , Caridina , Water quality management -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:6025 , http://hdl.handle.net/10962/d1005367 , Toxicity testing -- South Africa , Shrimp fisheries -- South Africa , Decapoda , Caridina , Water quality management -- South Africa
- Description: Aquatic toxicity tests are increasingly being used in water resource management worldwide, and currently in South Africa, policy and legislation are being drafted to reflect this international trend. While standard toxicity test methods and test organisms are being considered to develop and set water quality guidelines and effluent discharge limits, it is not clear whether guidelines and discharge limits set using these standard test organisms will be sufficient to protect South Africa’s scarce water resources. As part of ongoing research to investigate the use of indigenous riverine organisms as toxicity test organisms a number of potential species have been identified, including the freshwater shrimp Caridina nilotica. For much of the history of aquatic toxicological data the bulk of the data has been generated by acute toxicity testing, based on short exposures and using mortality as the response end point. There are relatively few chronic, longterm tests with sub-lethal endpoints. However, it was recognized that information about longer exposure durations and non lethal response endpoints was needed, instead of mortality. Chronic tests can provide a more environmentally realistic measure of chemical toxicity than acute toxicity tests. Caridina nilotica has been identified as a potential standard toxicity test organism, as it is widely distributed, easy to find and it occurs in flowing waters. It is an indigenous species which can be easily cultured and maintained in the laboratory and is also ecologically important. Both adults and juveniles have been used successfully in acute toxicity tests at the Institute for Water Research (Rhodes University) and the ability to rear the organisms under laboratory conditions has allowed the development of chronic toxicity tests using C. nilotica. Chronic early life stage tests include continuous exposure of the early life stages, which are presumed to be the most sensitive for aquatic organisms. This study reports on the embryonic development of C. nilotica at the culture temperature of 24⁰C. Morphological developmental stages were monitored and measured and 7 developmental stages were identified. Based on the measurements of the features that were identified, toxicity tests using the reference chemicals sodium chloride (NaCl), sodium sulphate (Na₂SO₄) and cadmium chloride (CdCl₂) were undertaken to test the suitability of C. nilotica embryonic development for chronic toxicity tests for use in water resource management. The length, width, length:width ratios and area of the features decreased in size when exposed to the chemicals. The Lowest Observed Effect Concentration (LOEC) values were 2000mg/L for Na₂SO₄, 3000mg/L for NaCl and 0.31mg/L for CdCl₂. The No Observed Effect Concentration (NOEC) values were 1000mg/L for Na₂SO₄, 2000mg/L for NaCl and <0.31mg/L for CdCl₂. Further research on the teratogenic effects of single chemicals and industrial effluent on developing C. nilotica embryos needs to be undertaken in order to evaluate the described test protocol for use in water resource management.
- Full Text:
- Date Issued: 2007
The impact of load and frequency on the biomechanical, physiological and perceptual responses to dynamic pushing
- Authors: Cripwell, Adam Michael
- Date: 2007
- Subjects: Work -- Physiological aspects , Psychophysiology , Human engineering , Biomechanics
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5144 , http://hdl.handle.net/10962/d1008183 , Work -- Physiological aspects , Psychophysiology , Human engineering , Biomechanics
- Description: The objective of the present research was to establish the biomechanical, physiological and perceptual responses of male operators to dynamic pushing tasks. The pushing tasks were performed using an industrial pallet jack with varying load/frequency combinations, in a controlled laboratory environment. Thirty healthy male subjects comprised the sample. Experimental procedures were conducted utilising the Chatillon ™ Dynamometer to measure force output in the initial, sustained and ending phases. The K4b2 Ergospirometer was used to assess physiological responses (heart rate and oxygen consumption [V02])' Nine recorded forces and nine experimental conditions formed the basis of this study, with subjects required to push three loads (200kg, 350kg, 500kg) at three frequencies (1120 sec, 1/40 sec, 1/60 sec) at a speed of 3.6km.h-1 over 14 metres on a co-efficient of friction controlled walkway for six minutes. Gait analysis, along with perceptions of exertion (,Central ' and 'Local' RPE) were collected during the third and sixth minutes of each condition . Body discomfort and contribution were identified upon completion of each condition. The results demonstrated that load and frequency interacted to influence responses within each domain. Increasing loads required increased force output during each stage of the push, which had a concomitant effect on physiological and perceptual responses. Significant differences arose between the initial, sustained and ending forces for each load, showing the direct relationship between load and force exertion. The combination of heaviest load/quickest frequency required the greatest physiological output, exceeding recommended guidelines for heart rate, V02 and energy expenditure responses. Intermediate combinations required moderate and acceptable energy cost. Linear relationships were established between heart rate and oxygen consumption , as well as between load and V02 , thus providing industrial practitioners an opportunity to evaluate task demands in situ. The combination of high forces and elevated physiological responses increased the subjective rating of the condition. The results emphasise the need to holistically consider all contributing factors in a dynamic pushing task. Dynamic pushing tasks place biomechanical, physiological and perceptual demands on the human operator, which must be minimised in order to ensure that this form of manual materials handling becomes sustainable in the long term.
- Full Text:
- Date Issued: 2007
- Authors: Cripwell, Adam Michael
- Date: 2007
- Subjects: Work -- Physiological aspects , Psychophysiology , Human engineering , Biomechanics
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5144 , http://hdl.handle.net/10962/d1008183 , Work -- Physiological aspects , Psychophysiology , Human engineering , Biomechanics
- Description: The objective of the present research was to establish the biomechanical, physiological and perceptual responses of male operators to dynamic pushing tasks. The pushing tasks were performed using an industrial pallet jack with varying load/frequency combinations, in a controlled laboratory environment. Thirty healthy male subjects comprised the sample. Experimental procedures were conducted utilising the Chatillon ™ Dynamometer to measure force output in the initial, sustained and ending phases. The K4b2 Ergospirometer was used to assess physiological responses (heart rate and oxygen consumption [V02])' Nine recorded forces and nine experimental conditions formed the basis of this study, with subjects required to push three loads (200kg, 350kg, 500kg) at three frequencies (1120 sec, 1/40 sec, 1/60 sec) at a speed of 3.6km.h-1 over 14 metres on a co-efficient of friction controlled walkway for six minutes. Gait analysis, along with perceptions of exertion (,Central ' and 'Local' RPE) were collected during the third and sixth minutes of each condition . Body discomfort and contribution were identified upon completion of each condition. The results demonstrated that load and frequency interacted to influence responses within each domain. Increasing loads required increased force output during each stage of the push, which had a concomitant effect on physiological and perceptual responses. Significant differences arose between the initial, sustained and ending forces for each load, showing the direct relationship between load and force exertion. The combination of heaviest load/quickest frequency required the greatest physiological output, exceeding recommended guidelines for heart rate, V02 and energy expenditure responses. Intermediate combinations required moderate and acceptable energy cost. Linear relationships were established between heart rate and oxygen consumption , as well as between load and V02 , thus providing industrial practitioners an opportunity to evaluate task demands in situ. The combination of high forces and elevated physiological responses increased the subjective rating of the condition. The results emphasise the need to holistically consider all contributing factors in a dynamic pushing task. Dynamic pushing tasks place biomechanical, physiological and perceptual demands on the human operator, which must be minimised in order to ensure that this form of manual materials handling becomes sustainable in the long term.
- Full Text:
- Date Issued: 2007
The mangement of government immovable assets
- Authors: Mavasa, Tamari Tlangelani
- Date: 2007
- Subjects: Government property -- South Africa , Public administration -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:9669 , http://hdl.handle.net/10948/561 , http://hdl.handle.net/10948/d1011726 , Government property -- South Africa , Public administration -- South Africa
- Description: Immovable asset management is the key element in enabling better service delivery by the national government. An improvement in the management of government’s immovable assets is required in South Africa to ensure that assets are optimally utilised for service delivery. The entire research attests to the importance of excellent management of government immovable assets throughout its life cycle within a framework of cost effectiveness, efficiency and reduced risk. The study discusses three technical challenges which comprise the incompleteness of the asset register, immovable asset life cycle management, a lack of implementation of the immovable asset management plan, the asset performance measures and standards for the immovable assets. The National Department of Public Works was targeted as a potential candidate to participate in this research. Primary data was collected through questionnaires and interviews to reveal the strengths and weaknesses and to develop the current theories and models. Secondary data was collected from books, journals, internet and conference papers. The asset management branch in the department was formed recently. The results of the research indicated that the asset management frameworks and the immovable asset management plans are not implemented as designed and there is no integration between the asset’s life cycle processes. The corrosion of information in the asset register was because of a lack of asset-computerized systems, competent personnel and adequate skills. In conclusion, immovable assets should be managed through integrated life cycle processes, policies and procedural documents should be developed and planning is important to the management of immovable assets. The asset register should work as a basic system for the management of immovable assets.
- Full Text:
- Date Issued: 2007
- Authors: Mavasa, Tamari Tlangelani
- Date: 2007
- Subjects: Government property -- South Africa , Public administration -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:9669 , http://hdl.handle.net/10948/561 , http://hdl.handle.net/10948/d1011726 , Government property -- South Africa , Public administration -- South Africa
- Description: Immovable asset management is the key element in enabling better service delivery by the national government. An improvement in the management of government’s immovable assets is required in South Africa to ensure that assets are optimally utilised for service delivery. The entire research attests to the importance of excellent management of government immovable assets throughout its life cycle within a framework of cost effectiveness, efficiency and reduced risk. The study discusses three technical challenges which comprise the incompleteness of the asset register, immovable asset life cycle management, a lack of implementation of the immovable asset management plan, the asset performance measures and standards for the immovable assets. The National Department of Public Works was targeted as a potential candidate to participate in this research. Primary data was collected through questionnaires and interviews to reveal the strengths and weaknesses and to develop the current theories and models. Secondary data was collected from books, journals, internet and conference papers. The asset management branch in the department was formed recently. The results of the research indicated that the asset management frameworks and the immovable asset management plans are not implemented as designed and there is no integration between the asset’s life cycle processes. The corrosion of information in the asset register was because of a lack of asset-computerized systems, competent personnel and adequate skills. In conclusion, immovable assets should be managed through integrated life cycle processes, policies and procedural documents should be developed and planning is important to the management of immovable assets. The asset register should work as a basic system for the management of immovable assets.
- Full Text:
- Date Issued: 2007
The medicinal chemistry of cyclo (Ser-Ser) and cyclo (Ser-Tyr)
- Authors: Kritzinger, André Louis
- Date: 2007
- Subjects: Cyclic peptides , Peptide drugs -- Therapeutic use , Haematostasis , Pharmaceutical chemistry
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10155 , http://hdl.handle.net/10948/537 , http://hdl.handle.net/10948/d1011712 , Cyclic peptides , Peptide drugs -- Therapeutic use , Haematostasis , Pharmaceutical chemistry
- Description: Cyclic dipeptides are widely used as models for larger peptides because of their simplicity and limited conformational freedom. Some cyclic dipeptides have been shown to produce antiviral, antibiotic and anti-tumour activity (Milne et al., 1998). In this study the cyclic dipeptides, cyclo(Ser-Ser) and cyclo(Ser-Tyr), were synthesised from their corresponding linear precursors using a modified phenolinduced cyclisation procedure. The phenol-induced cyclisation procedure resulted in good yields and purity of the cyclic dipeptides. Quantitative analysis and evaluation of the physicochemical properties of the cyclic dipeptides was achieved by using high-performance liquid chromatography, scanning electron microscopy, thermal analysis and X-ray powder diffraction. The structures of the synthesised cyclic dipeptides were elucidated using infrared spectroscopy, mass spectrometry, nuclear magnetic resonance spectroscopy and molecular modelling. The study aimed to determine the biological activity of cyclo(Ser-Ser) and cyclo(Ser-Tyr) with respect to their anticancer, antimicrobial, haematological and cardiac effects. Anticancer studies revealed that cyclo(Ser-Ser) and cyclo(Ser- Tyr) inhibited the growth of HeLa (cervical cancer), HT-29 (colon cancer) and MCF (breast cancer) cancer cell lines. Both cyclic dipeptides also inhibited the growth of certain selected Gram-positive, Gram-negative and fungal microorganisms in the antimicrobial study. Although the inhibition of growth in the anticancer and antimicrobial studies was statistically significant, the clinical relevance is questionable, since the inhibition produced by both cyclic dipeptides was very limited compared to other pre-existing anticancer and antimicrobial agents. Cyclo(Ser-Tyr) exhibited significant activity in the haematological studies, where it increased the rate of calcium induced-coagulation, and decreased the rate of streptokinase-induced fibrinolysis. Both cyclic dipeptides, however, failed to produce any significant effects on thrombin-substrate binding and ADPinduced platelet aggregation. Cardiac studies revealed that cyclo(Ser-Ser) and especially cyclo(Ser-Tyr) reduced the heart rate, coronary flow rate and ventricular pressure of isolated rat hearts.
- Full Text:
- Date Issued: 2007
- Authors: Kritzinger, André Louis
- Date: 2007
- Subjects: Cyclic peptides , Peptide drugs -- Therapeutic use , Haematostasis , Pharmaceutical chemistry
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10155 , http://hdl.handle.net/10948/537 , http://hdl.handle.net/10948/d1011712 , Cyclic peptides , Peptide drugs -- Therapeutic use , Haematostasis , Pharmaceutical chemistry
- Description: Cyclic dipeptides are widely used as models for larger peptides because of their simplicity and limited conformational freedom. Some cyclic dipeptides have been shown to produce antiviral, antibiotic and anti-tumour activity (Milne et al., 1998). In this study the cyclic dipeptides, cyclo(Ser-Ser) and cyclo(Ser-Tyr), were synthesised from their corresponding linear precursors using a modified phenolinduced cyclisation procedure. The phenol-induced cyclisation procedure resulted in good yields and purity of the cyclic dipeptides. Quantitative analysis and evaluation of the physicochemical properties of the cyclic dipeptides was achieved by using high-performance liquid chromatography, scanning electron microscopy, thermal analysis and X-ray powder diffraction. The structures of the synthesised cyclic dipeptides were elucidated using infrared spectroscopy, mass spectrometry, nuclear magnetic resonance spectroscopy and molecular modelling. The study aimed to determine the biological activity of cyclo(Ser-Ser) and cyclo(Ser-Tyr) with respect to their anticancer, antimicrobial, haematological and cardiac effects. Anticancer studies revealed that cyclo(Ser-Ser) and cyclo(Ser- Tyr) inhibited the growth of HeLa (cervical cancer), HT-29 (colon cancer) and MCF (breast cancer) cancer cell lines. Both cyclic dipeptides also inhibited the growth of certain selected Gram-positive, Gram-negative and fungal microorganisms in the antimicrobial study. Although the inhibition of growth in the anticancer and antimicrobial studies was statistically significant, the clinical relevance is questionable, since the inhibition produced by both cyclic dipeptides was very limited compared to other pre-existing anticancer and antimicrobial agents. Cyclo(Ser-Tyr) exhibited significant activity in the haematological studies, where it increased the rate of calcium induced-coagulation, and decreased the rate of streptokinase-induced fibrinolysis. Both cyclic dipeptides, however, failed to produce any significant effects on thrombin-substrate binding and ADPinduced platelet aggregation. Cardiac studies revealed that cyclo(Ser-Ser) and especially cyclo(Ser-Tyr) reduced the heart rate, coronary flow rate and ventricular pressure of isolated rat hearts.
- Full Text:
- Date Issued: 2007
The mutual embodiment of landscape and livelihoods: an environmental history of Nqabara
- Authors: De Klerk, Henning
- Date: 2007
- Subjects: Land reform -- South Africa -- Eastern Cape , Human ecology -- South Africa -- Eastern Cape , Human beings -- Effect of environment on -- South Africa -- Eastern Cape , Land use -- Environmental aspects -- South Africa -- Eastern Cape , Landscapes -- Social aspects -- South Africa -- Eastern Cape , Landscape ecology -- South Africa -- Eastern Cape , Land use, Rural -- South Africa -- Eastern Cape , Rural development -- South Africa -- Eastern Cape
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4750 , http://hdl.handle.net/10962/d1007054 , Land reform -- South Africa -- Eastern Cape , Human ecology -- South Africa -- Eastern Cape , Human beings -- Effect of environment on -- South Africa -- Eastern Cape , Land use -- Environmental aspects -- South Africa -- Eastern Cape , Landscapes -- Social aspects -- South Africa -- Eastern Cape , Landscape ecology -- South Africa -- Eastern Cape , Land use, Rural -- South Africa -- Eastern Cape , Rural development -- South Africa -- Eastern Cape
- Description: This thesis presents a history of the landscape of Nqabara, an administrative area in a rural and coastal area of the Eastern Cape Province, South Africa. In the process of investigating landscape history, the inquiry engages with a range of data sources from diverging discursive contexts, including data from ethnographic fieldwork, from the consultation of archival documents and historical reports as well as from comparative historic and ethnographic research, necessitating a critical consideration of the epistemological contexts of data production and the dialogue between researcher and data. Furthermore, in its aim to move beyond historical description towards explanation, the study interrogates the dualist ontological conceptualisations of nature and culture, society and ecology, object and meaning upon which are built three dominant conceptual frameworks concerned with human-environment relationships: social-ecological systems theory, transdisciplinary landscape studies and political ecology. Drawing primarily upon the works of James Gibson, Anthony Giddens and Tim Ingold, an ontological foundation is developed to guide the enquiry and move towards an alternative understanding of the relationship of people’s livelihoods with respect to the landscape in which it is lived, which I call here the praxisembodiment perspective. This ontology takes the situated patterns of action of a situated agent-in-its-environment as its point of departure and proceeds to develop a framework explaining how relations among the patterns of action of different agents-in-their-environment, emerge in structures that simultaneously enable and constrain future action. The foundation is thereby provided for a monist understanding of how landscape and social structure emerge simultaneously from the complex intersection of patterns of actions and interactions of agents in their environment. This framework calls for an understanding of time, space and scale, not as independent variables influencing process and action, but as emergent properties arising from the patterns of actions of situated agents. Finally the alternative ontology is applied to the history of landscape and livelihoods of people of Nqabara. It is concluded that an appropriate understanding and explanation of the critical transformations in the landscape as well as in social institutions, should be sought through analysis of the complex ways in which patterns of action of multiple spatial and temporal rhythms and between multiple agents in an environment, intersect and resonate.
- Full Text:
- Date Issued: 2007
- Authors: De Klerk, Henning
- Date: 2007
- Subjects: Land reform -- South Africa -- Eastern Cape , Human ecology -- South Africa -- Eastern Cape , Human beings -- Effect of environment on -- South Africa -- Eastern Cape , Land use -- Environmental aspects -- South Africa -- Eastern Cape , Landscapes -- Social aspects -- South Africa -- Eastern Cape , Landscape ecology -- South Africa -- Eastern Cape , Land use, Rural -- South Africa -- Eastern Cape , Rural development -- South Africa -- Eastern Cape
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4750 , http://hdl.handle.net/10962/d1007054 , Land reform -- South Africa -- Eastern Cape , Human ecology -- South Africa -- Eastern Cape , Human beings -- Effect of environment on -- South Africa -- Eastern Cape , Land use -- Environmental aspects -- South Africa -- Eastern Cape , Landscapes -- Social aspects -- South Africa -- Eastern Cape , Landscape ecology -- South Africa -- Eastern Cape , Land use, Rural -- South Africa -- Eastern Cape , Rural development -- South Africa -- Eastern Cape
- Description: This thesis presents a history of the landscape of Nqabara, an administrative area in a rural and coastal area of the Eastern Cape Province, South Africa. In the process of investigating landscape history, the inquiry engages with a range of data sources from diverging discursive contexts, including data from ethnographic fieldwork, from the consultation of archival documents and historical reports as well as from comparative historic and ethnographic research, necessitating a critical consideration of the epistemological contexts of data production and the dialogue between researcher and data. Furthermore, in its aim to move beyond historical description towards explanation, the study interrogates the dualist ontological conceptualisations of nature and culture, society and ecology, object and meaning upon which are built three dominant conceptual frameworks concerned with human-environment relationships: social-ecological systems theory, transdisciplinary landscape studies and political ecology. Drawing primarily upon the works of James Gibson, Anthony Giddens and Tim Ingold, an ontological foundation is developed to guide the enquiry and move towards an alternative understanding of the relationship of people’s livelihoods with respect to the landscape in which it is lived, which I call here the praxisembodiment perspective. This ontology takes the situated patterns of action of a situated agent-in-its-environment as its point of departure and proceeds to develop a framework explaining how relations among the patterns of action of different agents-in-their-environment, emerge in structures that simultaneously enable and constrain future action. The foundation is thereby provided for a monist understanding of how landscape and social structure emerge simultaneously from the complex intersection of patterns of actions and interactions of agents in their environment. This framework calls for an understanding of time, space and scale, not as independent variables influencing process and action, but as emergent properties arising from the patterns of actions of situated agents. Finally the alternative ontology is applied to the history of landscape and livelihoods of people of Nqabara. It is concluded that an appropriate understanding and explanation of the critical transformations in the landscape as well as in social institutions, should be sought through analysis of the complex ways in which patterns of action of multiple spatial and temporal rhythms and between multiple agents in an environment, intersect and resonate.
- Full Text:
- Date Issued: 2007
The perceived economic impact of the city of Johannesburg's storm water attenuation policy on private property developers
- Authors: Aldous, Michael Geoffrey
- Date: 2007
- Subjects: Runoff -- South Africa -- Johannesburg , Real estate development -- South Africa -- Johannesburg
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:9668 , http://hdl.handle.net/10948/765 , Runoff -- South Africa -- Johannesburg , Real estate development -- South Africa -- Johannesburg
- Description: Stormwater attenuation policy has, over recent years, become a highly contentious issue for the property development community. Increased urbanisation, locally and internationally, has forced municipal authorities to reconsider the role of stormwater management in this evolving urban landscape. It is within this context that the legislative support and municipal policy for stormwater management in the City of Johannesburg has been explored, particularly in terms of the economic impact on property developers. The research aimed to explore the relationship between stormwater attenuation policy and the economic impact thereof on private property developers. Consideration was given to the cost, risk and time factors of legislative and policy requirements within the development process. Further consideration was given to the physical environment that has brought about current pressures. Based upon research of international issues highlighted in countries with well developed attenuation policy, a questionnaire was constructed to evaluate the response of local private property developers to selected issues as key sub-problems. The responses were tested against the developed set of hypotheses. The research indicated that developers had a generally poor level of knowledge with regard to the stormwater management policy of the City of Johannesburg, as well as the supporting legislative requirements of provincial and national policy documents. The results of the survey also indicated that developers were strongly opposed to the loss of developable area, but indicated a limited financial impact of the current stormwater attenuation policy. The risk inherent in incorporating an attenuation facility within a development was identified as being low with little perceived impact. Developers further indicated that the inclusion of attenuation facilities was seen as a significant contributing factor in the delay, approval and acceptance of new developments in which attenuation facilities were required, while maintenance costs were indicated to be of a low level of importance. Recommendations in response to the research findings included the establishment of detailed policy documentation and support for effective distribution channels in conjunction with industry and public focused information campaigns, improved municipal capacity and a greater level of technical support. A need for additional stormwater research and an increase in the capture of relevant data for GIS purposes was identified.
- Full Text:
- Date Issued: 2007
- Authors: Aldous, Michael Geoffrey
- Date: 2007
- Subjects: Runoff -- South Africa -- Johannesburg , Real estate development -- South Africa -- Johannesburg
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:9668 , http://hdl.handle.net/10948/765 , Runoff -- South Africa -- Johannesburg , Real estate development -- South Africa -- Johannesburg
- Description: Stormwater attenuation policy has, over recent years, become a highly contentious issue for the property development community. Increased urbanisation, locally and internationally, has forced municipal authorities to reconsider the role of stormwater management in this evolving urban landscape. It is within this context that the legislative support and municipal policy for stormwater management in the City of Johannesburg has been explored, particularly in terms of the economic impact on property developers. The research aimed to explore the relationship between stormwater attenuation policy and the economic impact thereof on private property developers. Consideration was given to the cost, risk and time factors of legislative and policy requirements within the development process. Further consideration was given to the physical environment that has brought about current pressures. Based upon research of international issues highlighted in countries with well developed attenuation policy, a questionnaire was constructed to evaluate the response of local private property developers to selected issues as key sub-problems. The responses were tested against the developed set of hypotheses. The research indicated that developers had a generally poor level of knowledge with regard to the stormwater management policy of the City of Johannesburg, as well as the supporting legislative requirements of provincial and national policy documents. The results of the survey also indicated that developers were strongly opposed to the loss of developable area, but indicated a limited financial impact of the current stormwater attenuation policy. The risk inherent in incorporating an attenuation facility within a development was identified as being low with little perceived impact. Developers further indicated that the inclusion of attenuation facilities was seen as a significant contributing factor in the delay, approval and acceptance of new developments in which attenuation facilities were required, while maintenance costs were indicated to be of a low level of importance. Recommendations in response to the research findings included the establishment of detailed policy documentation and support for effective distribution channels in conjunction with industry and public focused information campaigns, improved municipal capacity and a greater level of technical support. A need for additional stormwater research and an increase in the capture of relevant data for GIS purposes was identified.
- Full Text:
- Date Issued: 2007
The role of aardvarks (Orycteropus afer) as ecosystem engineers in arid and semi-arid landscapes of South Africa
- Whittington-Jones, Gareth Morgan
- Authors: Whittington-Jones, Gareth Morgan
- Date: 2007
- Subjects: Aardvark , Aardvark -- South Africa , Aardvark -- South Africa -- Habitations , Animal burrowing
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5757 , http://hdl.handle.net/10962/d1005445 , Aardvark , Aardvark -- South Africa , Aardvark -- South Africa -- Habitations , Animal burrowing
- Description: Arid and semi arid environments are characterised by extreme fluctuations in temperature and low rainfall which present significant challenges to the animals inhabiting these areas. Mammals, such as aardvarks (Orycteropus afer, Pallas 1766), excavate burrows in order to avoid predators and climatic extremes and are termed “ecosystem engineers” as they physically modify their environment and in doing so create new habitats and alter the availability of resources to other species. In this study I assessed the microhabitat conditions (maximum and minimum temperature, relative humidity and seed abundance) of aardvark burrows in relation to paired control sites. In addition, I evaluated the use of aardvark burrows by other vertebrate and invertebrate species and investigated the impact of aardvark burrow mounds on landscape scale floristic diversity. Maximum temperatures were significantly lower (p < 0.05) and minimum temperatures and midday humidity were significantly higher (p < 0.05) inside the burrows at the three study sites, Kwandwe Private Game Reserve (Kwandwe), Mountain Zebra National Park (MZNP) and Tswalu Kalahari Reserve (Tswalu). There were no significant differences between the concentration of seeds, the average numbers of unique individual small mammals, trap success or small mammal species richness recorded inside the burrows compared to outside (p > 0.05). At all three sites, small mammal species diversity was higher in the burrows but this result was also not significant (p > 0.05 for all). Trap success and the number of individuals captured was higher at Tswalu than the other two sites (p < 0.05 for both). The different methods used in this study revealed a total of 25 mammal, seven bird, one amphibian and six reptile species utilising aardvark burrows. There were significant differences in insect community assemblages between the burrows and open control areas at Kwandwe and Tswalu (p < 0.05 for both) but not at MZNP (p > 0.05). The parasitic guild was more prominent inside the burrows than outside but their abundance was not as high as anticipated, possibly due to the placement of traps closer to the burrow entrances than the sleeping chambers. The complex structure of the burrows prevented the placement of traps in close proximity to the sleeping chambers. As expected, the amount of bare earth was significantly higher on active and recently abandoned burrow mounds compared to the old burrow mounds and reference plots at all three sites (p < 0.05 for all), with the exception of the active burrows at Tswalu. Overall, the different plot types were characterised by significantly different plant communities during all the seasons at MZNP, during three of the seasons at Kwandwe and only during winter at Tswalu. The total species richness recorded on the reference plots was higher than on the burrow mounds at all three sites. However, species diversity on the reference plots was not significantly higher than the burrows at any of the sites (p > 0.05 for all sites). Although the results were not significant, the overall species diversity at a site level was greater than the reference patches at Kwandwe and Tswalu (p > 0.05 for both). Aardvarks fulfil the criteria of a significant ecosystem engineer and their presence in arid and semi-arid environments is likely to be critical to the survival of other individual organisms and species, particularly when alternative burrowing animals are either absent or restricted in their activities. Thus, aardvark populations should be considered a conservation priority in arid and semi-arid ecosystems.
- Full Text:
- Date Issued: 2007
- Authors: Whittington-Jones, Gareth Morgan
- Date: 2007
- Subjects: Aardvark , Aardvark -- South Africa , Aardvark -- South Africa -- Habitations , Animal burrowing
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5757 , http://hdl.handle.net/10962/d1005445 , Aardvark , Aardvark -- South Africa , Aardvark -- South Africa -- Habitations , Animal burrowing
- Description: Arid and semi arid environments are characterised by extreme fluctuations in temperature and low rainfall which present significant challenges to the animals inhabiting these areas. Mammals, such as aardvarks (Orycteropus afer, Pallas 1766), excavate burrows in order to avoid predators and climatic extremes and are termed “ecosystem engineers” as they physically modify their environment and in doing so create new habitats and alter the availability of resources to other species. In this study I assessed the microhabitat conditions (maximum and minimum temperature, relative humidity and seed abundance) of aardvark burrows in relation to paired control sites. In addition, I evaluated the use of aardvark burrows by other vertebrate and invertebrate species and investigated the impact of aardvark burrow mounds on landscape scale floristic diversity. Maximum temperatures were significantly lower (p < 0.05) and minimum temperatures and midday humidity were significantly higher (p < 0.05) inside the burrows at the three study sites, Kwandwe Private Game Reserve (Kwandwe), Mountain Zebra National Park (MZNP) and Tswalu Kalahari Reserve (Tswalu). There were no significant differences between the concentration of seeds, the average numbers of unique individual small mammals, trap success or small mammal species richness recorded inside the burrows compared to outside (p > 0.05). At all three sites, small mammal species diversity was higher in the burrows but this result was also not significant (p > 0.05 for all). Trap success and the number of individuals captured was higher at Tswalu than the other two sites (p < 0.05 for both). The different methods used in this study revealed a total of 25 mammal, seven bird, one amphibian and six reptile species utilising aardvark burrows. There were significant differences in insect community assemblages between the burrows and open control areas at Kwandwe and Tswalu (p < 0.05 for both) but not at MZNP (p > 0.05). The parasitic guild was more prominent inside the burrows than outside but their abundance was not as high as anticipated, possibly due to the placement of traps closer to the burrow entrances than the sleeping chambers. The complex structure of the burrows prevented the placement of traps in close proximity to the sleeping chambers. As expected, the amount of bare earth was significantly higher on active and recently abandoned burrow mounds compared to the old burrow mounds and reference plots at all three sites (p < 0.05 for all), with the exception of the active burrows at Tswalu. Overall, the different plot types were characterised by significantly different plant communities during all the seasons at MZNP, during three of the seasons at Kwandwe and only during winter at Tswalu. The total species richness recorded on the reference plots was higher than on the burrow mounds at all three sites. However, species diversity on the reference plots was not significantly higher than the burrows at any of the sites (p > 0.05 for all sites). Although the results were not significant, the overall species diversity at a site level was greater than the reference patches at Kwandwe and Tswalu (p > 0.05 for both). Aardvarks fulfil the criteria of a significant ecosystem engineer and their presence in arid and semi-arid environments is likely to be critical to the survival of other individual organisms and species, particularly when alternative burrowing animals are either absent or restricted in their activities. Thus, aardvark populations should be considered a conservation priority in arid and semi-arid ecosystems.
- Full Text:
- Date Issued: 2007
The role of arbuscular mycorrhizal fungi in the biotransformation of coal and application in dump rehabilitation
- Mukasa-Mugerwa, Thomas Tendo
- Authors: Mukasa-Mugerwa, Thomas Tendo
- Date: 2007
- Subjects: Vesicular-arbuscular mycorrhizas , Mycorrhizal fungi , Fungi -- Biotechnology , Bermuda grass , Coal mines and mining -- Environmental aspects , Acid mine drainage
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:3999 , http://hdl.handle.net/10962/d1004059 , Vesicular-arbuscular mycorrhizas , Mycorrhizal fungi , Fungi -- Biotechnology , Bermuda grass , Coal mines and mining -- Environmental aspects , Acid mine drainage
- Description: Fundamental processes underpinning the biotransformation of coal by fungal biocatalysts have been intensively investigated, however, limited large-scale industrial applications using such systems have been reported. The un-anticipated sporadic growth of Cynodon dactylon on the surface of un-rehabilitated discard coal dumps has been noted and this was found to be coupled with the breakdown of coal into a humic soil-like material in the top 1.5 metres of the dumps. Extensive fungal growth was observed to be associated with the Cynodon dactylon root system and examination of plant roots indicated the presence of mycorrhizal fungi. Analysis of the Cynodon dactylon plant roots around which coal biotransformation was occurring confirmed the presence of arbuscular mycorrhizal colonisation with the species Glomus clarum, Paraglomus occultum, Gigaspora gigantea and Glomus mosseae identified to be associated with the plants. Further molecular characterisation of non-mycorrhizal rhizospheric fungi showed the presence of fungal species with coal-degrading capabilities that most likely played a role in the coal biotransformation observed. The discard coal dump environment was simulated in pot and column studies and coal biotransformation was reproduced, with this process enhanced by the addition of mycorrhizal and non-mycorrhizal rhizospheric fungal inocula to the environment. Mycorrhizal and non-mycorrhizal species in the inoculum were re-isolated from the simulated environment fulfilling a number of Koch’s postulates and indicating a causal role in the biotransformation of coal. An inversion of conventional mycorrhizal colonisation was demonstrated in this system with reduction in extraradicular presence and an increase in intracellular colonisation compared to soil controls. A descriptive model was formulated suggesting a two-part fungal system involving organic carbon and nutrient exchange between the plant, mycorrhizal fungi and non-mycorrhizal coal-degrading rhizospheric fungi ultimately resulting in the biotransformation of coal. The biotransformation observed was comparable to reports of “rock-eating fungi”. Results suggest that the biological degradation of coal in situ with the production of a soil-like substrate could provide a feasible method of discard coal dump rehabilitation as well as provide a humic-rich substrate that can be utilised in further industrial applications.
- Full Text:
- Date Issued: 2007
- Authors: Mukasa-Mugerwa, Thomas Tendo
- Date: 2007
- Subjects: Vesicular-arbuscular mycorrhizas , Mycorrhizal fungi , Fungi -- Biotechnology , Bermuda grass , Coal mines and mining -- Environmental aspects , Acid mine drainage
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:3999 , http://hdl.handle.net/10962/d1004059 , Vesicular-arbuscular mycorrhizas , Mycorrhizal fungi , Fungi -- Biotechnology , Bermuda grass , Coal mines and mining -- Environmental aspects , Acid mine drainage
- Description: Fundamental processes underpinning the biotransformation of coal by fungal biocatalysts have been intensively investigated, however, limited large-scale industrial applications using such systems have been reported. The un-anticipated sporadic growth of Cynodon dactylon on the surface of un-rehabilitated discard coal dumps has been noted and this was found to be coupled with the breakdown of coal into a humic soil-like material in the top 1.5 metres of the dumps. Extensive fungal growth was observed to be associated with the Cynodon dactylon root system and examination of plant roots indicated the presence of mycorrhizal fungi. Analysis of the Cynodon dactylon plant roots around which coal biotransformation was occurring confirmed the presence of arbuscular mycorrhizal colonisation with the species Glomus clarum, Paraglomus occultum, Gigaspora gigantea and Glomus mosseae identified to be associated with the plants. Further molecular characterisation of non-mycorrhizal rhizospheric fungi showed the presence of fungal species with coal-degrading capabilities that most likely played a role in the coal biotransformation observed. The discard coal dump environment was simulated in pot and column studies and coal biotransformation was reproduced, with this process enhanced by the addition of mycorrhizal and non-mycorrhizal rhizospheric fungal inocula to the environment. Mycorrhizal and non-mycorrhizal species in the inoculum were re-isolated from the simulated environment fulfilling a number of Koch’s postulates and indicating a causal role in the biotransformation of coal. An inversion of conventional mycorrhizal colonisation was demonstrated in this system with reduction in extraradicular presence and an increase in intracellular colonisation compared to soil controls. A descriptive model was formulated suggesting a two-part fungal system involving organic carbon and nutrient exchange between the plant, mycorrhizal fungi and non-mycorrhizal coal-degrading rhizospheric fungi ultimately resulting in the biotransformation of coal. The biotransformation observed was comparable to reports of “rock-eating fungi”. Results suggest that the biological degradation of coal in situ with the production of a soil-like substrate could provide a feasible method of discard coal dump rehabilitation as well as provide a humic-rich substrate that can be utilised in further industrial applications.
- Full Text:
- Date Issued: 2007
The role of pacC in Aspergillus flavus
- Authors: Suleman, Essa
- Date: 2007
- Subjects: Fungi -- Biotechnology , Pathogenic microorganisms
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10332 , http://hdl.handle.net/10948/612 , Fungi -- Biotechnology , Pathogenic microorganisms
- Description: Many microorganisms, and in particular fungi, are able to grow over a wide pH range. Thus, these microorganisms must possess some regulatory mechanism or system that senses the environmental pH signal and ensures that gene expression of certain molecules is tailored to the pH of the environment (Penalva and Arst, 2002). In Aspergillus species and several other fungi, pH regulation is mediated by seven genes viz. palA, palB, palC, palF, palH, palI and the global pH regulatory gene, pacC (MacAbe et al, 1996; Negrete-Urtasun, 1999; Denison, 2000). The activated form of the PacC protein activates genes that are required at alkaline pH, e.g. genes coding for alkaline phosphatases, and represses certain genes that are functional at acidic pH, e.g. genes encoding acid phosphatases (Negrete-Urtasun, 1999). PacC (and its homologues) also positively regulates genes involved in penicillin biosynthesis, e.g. the isopenicillin N synthase gene, ipnA, in A. nidulans (Penalva and Arst, 2002). It has also been hypothesised that pacC may negatively regulate aflatoxin biosynthesis, a carcinogenic secondary metabolite in several species of Aspergillus (Keller et al, 1997). To elucidate the role of pacC a novel method of post-transcriptional gene silencing known as RNA interference was utilized. This method involved the cloning of a partial pacC gene fragment first in the forward and then the reverse orientations in a fungal expression cassette to create an RNA interference (RNAi) vector. The unique structure of this vector would allow the cloned fragments to be expressed and the resulting RNA to immediately form a double stranded stem-loop structure or short hairpin RNA (shRNA; McDonald et al, 2005). The formation of this shRNA, in turn, would be responsible for activating the endogenous RNA degradation complexes that would lead to mRNA degradation and subsequent gene silencing (Liu et al, 2003; Kadotoni et al, 2003; McDonald et al, 2005). The results presented here have shown that confirmed pacC RNAi mutants produced aflatoxins irrespective of environmental pH (i.e. the mutants produce aflatoxins under acidic and alkaline conditions). Thus, pacC is essential for pH regulation of aflatoxin production in A. flavus. There are numerous other biological (e.g. presence of oxylipins, lipooxygenases) and non-biological factors (pH, carbon source etc.) which affect maize colonisation and aflatoxin production by A. flavus (Burrow et al, 1996; Wilson et al, 2001; Calvo et al; 2002; Tsitsigiannis et al, 2006). However, all the genetic mechanisms involved have as yet not been identified. It has been shown by Caracuel et al (2003) that pacC acts as a negative virulence regulator in plants and these workers have hypothesised that PacC prevents expression of genes that are important for infection and virulence of the pathogen. Therefore the physiological effects that pacC silencing had on the growth, conidiation and pathogenicity of A. flavus mutants were also investigated. The results of this study showed that pacC does not play a significant role in primary growth and development but does affect conidial production. SEM results showed that mutants have many “open ended” phialides and poorly developed conidiophores. This would suggest that pacC activation of conidial production genes is also required. Furthermore, pacC RNAi silencing severely impaired the ability of the A. flavus mutants to infect and cause damage on maize. The results obtained here are similar to that of pacC null mutants in A. nidulans, C. albicans and F. oxysporum which also exhibited low pathogenicity (Davis et al, 2000; Fonzi, W.A, 2002; Caracuel et al, 2003; Bignell et al, 2005 and Cornet et al, 2005). This study indicates that pathogenicity of A. flavus on maize is directly related to the structural integrity of conidia, which in turn is greatly influenced by PacC. This gene is a global transcriptional regulator and may either repress or activate one or many genes in each of the above pathways (Penalva and Arst, 2002). Studies on the genetic mechanisms of pacC regulation on these pathways are needed to elucidate the mechanisms of activation or repression of these genes.
- Full Text:
- Date Issued: 2007
- Authors: Suleman, Essa
- Date: 2007
- Subjects: Fungi -- Biotechnology , Pathogenic microorganisms
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10332 , http://hdl.handle.net/10948/612 , Fungi -- Biotechnology , Pathogenic microorganisms
- Description: Many microorganisms, and in particular fungi, are able to grow over a wide pH range. Thus, these microorganisms must possess some regulatory mechanism or system that senses the environmental pH signal and ensures that gene expression of certain molecules is tailored to the pH of the environment (Penalva and Arst, 2002). In Aspergillus species and several other fungi, pH regulation is mediated by seven genes viz. palA, palB, palC, palF, palH, palI and the global pH regulatory gene, pacC (MacAbe et al, 1996; Negrete-Urtasun, 1999; Denison, 2000). The activated form of the PacC protein activates genes that are required at alkaline pH, e.g. genes coding for alkaline phosphatases, and represses certain genes that are functional at acidic pH, e.g. genes encoding acid phosphatases (Negrete-Urtasun, 1999). PacC (and its homologues) also positively regulates genes involved in penicillin biosynthesis, e.g. the isopenicillin N synthase gene, ipnA, in A. nidulans (Penalva and Arst, 2002). It has also been hypothesised that pacC may negatively regulate aflatoxin biosynthesis, a carcinogenic secondary metabolite in several species of Aspergillus (Keller et al, 1997). To elucidate the role of pacC a novel method of post-transcriptional gene silencing known as RNA interference was utilized. This method involved the cloning of a partial pacC gene fragment first in the forward and then the reverse orientations in a fungal expression cassette to create an RNA interference (RNAi) vector. The unique structure of this vector would allow the cloned fragments to be expressed and the resulting RNA to immediately form a double stranded stem-loop structure or short hairpin RNA (shRNA; McDonald et al, 2005). The formation of this shRNA, in turn, would be responsible for activating the endogenous RNA degradation complexes that would lead to mRNA degradation and subsequent gene silencing (Liu et al, 2003; Kadotoni et al, 2003; McDonald et al, 2005). The results presented here have shown that confirmed pacC RNAi mutants produced aflatoxins irrespective of environmental pH (i.e. the mutants produce aflatoxins under acidic and alkaline conditions). Thus, pacC is essential for pH regulation of aflatoxin production in A. flavus. There are numerous other biological (e.g. presence of oxylipins, lipooxygenases) and non-biological factors (pH, carbon source etc.) which affect maize colonisation and aflatoxin production by A. flavus (Burrow et al, 1996; Wilson et al, 2001; Calvo et al; 2002; Tsitsigiannis et al, 2006). However, all the genetic mechanisms involved have as yet not been identified. It has been shown by Caracuel et al (2003) that pacC acts as a negative virulence regulator in plants and these workers have hypothesised that PacC prevents expression of genes that are important for infection and virulence of the pathogen. Therefore the physiological effects that pacC silencing had on the growth, conidiation and pathogenicity of A. flavus mutants were also investigated. The results of this study showed that pacC does not play a significant role in primary growth and development but does affect conidial production. SEM results showed that mutants have many “open ended” phialides and poorly developed conidiophores. This would suggest that pacC activation of conidial production genes is also required. Furthermore, pacC RNAi silencing severely impaired the ability of the A. flavus mutants to infect and cause damage on maize. The results obtained here are similar to that of pacC null mutants in A. nidulans, C. albicans and F. oxysporum which also exhibited low pathogenicity (Davis et al, 2000; Fonzi, W.A, 2002; Caracuel et al, 2003; Bignell et al, 2005 and Cornet et al, 2005). This study indicates that pathogenicity of A. flavus on maize is directly related to the structural integrity of conidia, which in turn is greatly influenced by PacC. This gene is a global transcriptional regulator and may either repress or activate one or many genes in each of the above pathways (Penalva and Arst, 2002). Studies on the genetic mechanisms of pacC regulation on these pathways are needed to elucidate the mechanisms of activation or repression of these genes.
- Full Text:
- Date Issued: 2007
The significance of the safety-net role of NTFPs in rural livelihoods, South Africa
- Authors: Paumgarten, Fiona
- Date: 2007
- Subjects: Non-timber forest products -- South Africa , Households -- Economic aspects -- South Africa , Rural development -- South Africa -- Economic aspects , Sustainable development -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4763 , http://hdl.handle.net/10962/d1007161 , Non-timber forest products -- South Africa , Households -- Economic aspects -- South Africa , Rural development -- South Africa -- Economic aspects , Sustainable development -- South Africa
- Description: This study was conducted in two rural villages in South Africa with the purpose of investigating the safety-net role of non-timber forest products (NTFPs). The use of NTFPs as a safety-net is reported as a common feature of rural livelihoods however empirical data supporting this function is limited. Therefore, policy makers and land-use planners underappreciate the probable role and consequent value of the safety-net function. The findings show that poor, rural households are vulnerable to a range of risks. Over a two year period 100% of households reported experiencing crises including unexpected idiosyncratic risks (e.g. illness, retrenchment, crop failure and death) as well as expected expenses and periods of vulnerability (e.g. the payment of school fees and seasonal crop shortfalls). Households are prone to these risks irrespective of wealth or gender of the de jure household head. To secure their livelihoods households in both villages rely on a variety of livelihood strategies including waged labour (53%), self-employment (30%), government grants (60%), arable agriculture (56%), animal husbandry (64%) and the use (100%) and sale (22%) of NTFPs. In terms of the proportion of households involved, the findings suggest land-based strategies make an important contribution. Formal employment and old-age pensions distinguish wealthy households from poor and allow for investments in assets and saving schemes (62%). In response to the risks experienced households employed a variety of coping strategies. Generally the most commonly used strategies were kinship (85%), reduced household spending (72%), changes to food consumption and saving (72%) and relying on NTFPs (70%). Kinship and NTFPs show no differences for wealth or gender of the de jure household head. The remaining strategies are influenced by wealth. The use of NTFPs as a safety-net manifested predominantly through the increased use of products, then the substitution of commercial goods by NTFPs and lastly through the sale. Of those using NTFPs as a rural safety-net 41.4% used of wild foods, 40% used medicinal plants, 25.7% substituted paraffin with fuelwood, 10% sold fuelwood and 8.6% sold other products.
- Full Text:
- Date Issued: 2007
- Authors: Paumgarten, Fiona
- Date: 2007
- Subjects: Non-timber forest products -- South Africa , Households -- Economic aspects -- South Africa , Rural development -- South Africa -- Economic aspects , Sustainable development -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4763 , http://hdl.handle.net/10962/d1007161 , Non-timber forest products -- South Africa , Households -- Economic aspects -- South Africa , Rural development -- South Africa -- Economic aspects , Sustainable development -- South Africa
- Description: This study was conducted in two rural villages in South Africa with the purpose of investigating the safety-net role of non-timber forest products (NTFPs). The use of NTFPs as a safety-net is reported as a common feature of rural livelihoods however empirical data supporting this function is limited. Therefore, policy makers and land-use planners underappreciate the probable role and consequent value of the safety-net function. The findings show that poor, rural households are vulnerable to a range of risks. Over a two year period 100% of households reported experiencing crises including unexpected idiosyncratic risks (e.g. illness, retrenchment, crop failure and death) as well as expected expenses and periods of vulnerability (e.g. the payment of school fees and seasonal crop shortfalls). Households are prone to these risks irrespective of wealth or gender of the de jure household head. To secure their livelihoods households in both villages rely on a variety of livelihood strategies including waged labour (53%), self-employment (30%), government grants (60%), arable agriculture (56%), animal husbandry (64%) and the use (100%) and sale (22%) of NTFPs. In terms of the proportion of households involved, the findings suggest land-based strategies make an important contribution. Formal employment and old-age pensions distinguish wealthy households from poor and allow for investments in assets and saving schemes (62%). In response to the risks experienced households employed a variety of coping strategies. Generally the most commonly used strategies were kinship (85%), reduced household spending (72%), changes to food consumption and saving (72%) and relying on NTFPs (70%). Kinship and NTFPs show no differences for wealth or gender of the de jure household head. The remaining strategies are influenced by wealth. The use of NTFPs as a safety-net manifested predominantly through the increased use of products, then the substitution of commercial goods by NTFPs and lastly through the sale. Of those using NTFPs as a rural safety-net 41.4% used of wild foods, 40% used medicinal plants, 25.7% substituted paraffin with fuelwood, 10% sold fuelwood and 8.6% sold other products.
- Full Text:
- Date Issued: 2007
The use of Landsat ETM imagery as a suitable data capture source for alien acacia species for the WFW programme
- Authors: Cobbing, Benedict Louis
- Date: 2007
- Subjects: Geographic information systems , Global Positioning System , Landsat satellites , Agriculture -- Remote sensing , Geography -- Remote sensing
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4856 , http://hdl.handle.net/10962/d1005532 , Geographic information systems , Global Positioning System , Landsat satellites , Agriculture -- Remote sensing , Geography -- Remote sensing
- Description: Geographic Information System technology today allows for the rapid analysis of vast amounts of spatial and non-spatial data. The power of a GIS can only be effected with the rapid collection of accurate input data. This is particularly true in the case of the South African National Working for Water (WFW) Programme where large volumes of spatial data on alien vegetation infestations are captured throughout the country. Alien vegetation clearing contracts cannot be generated, for WFW, without this data, so that the accurate capture of such data is crucial to the success of the programme. Mapping Invasive Alien Plant (IAP) data within WFW is a perennial problem (Coetzee, pers com, 2002), because not enough mapping is being done to meet the annual requirements of the programme in the various provinces. This is re-iterated by Richardson, 2004, who states that there is a shortage of accurate data on IAP abundance in South Africa. Therefore there is a need to investigate alternate methods of data capture; such as remote sensing, whilst working within the existing WFW data capture standards. The aim of this research was to investigate the use of Landsat ETM imagery as a data capture source for mapping alien vegetation for the WFW Programme in terms of their approved mapping methods, for both automated and manual classification techniques. The automated and manual classification results were compared to control data captured by differential Global Positioning Systems (DGPS). The research tested the various methods of data capture using Landsat ETM images over a range of study sites of varying complexity: a simple grassland area, a medium complexity grassy fynbos site and a complicated indigenous forest site. An important component of the research was to develop a mapping (classification) Ranking System based upon variables identified by WFW as fundamental in data capture decision making: spatial and positional accuracy, time constraints and cost constraints for three typical alien invaded areas. The mapping Ranking System compared the results of the various mapping methods for each factor for the study sites against each other. This provided an indication of which mapping method is the most efficient or suitable for a particular area.
- Full Text:
- Date Issued: 2007
- Authors: Cobbing, Benedict Louis
- Date: 2007
- Subjects: Geographic information systems , Global Positioning System , Landsat satellites , Agriculture -- Remote sensing , Geography -- Remote sensing
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4856 , http://hdl.handle.net/10962/d1005532 , Geographic information systems , Global Positioning System , Landsat satellites , Agriculture -- Remote sensing , Geography -- Remote sensing
- Description: Geographic Information System technology today allows for the rapid analysis of vast amounts of spatial and non-spatial data. The power of a GIS can only be effected with the rapid collection of accurate input data. This is particularly true in the case of the South African National Working for Water (WFW) Programme where large volumes of spatial data on alien vegetation infestations are captured throughout the country. Alien vegetation clearing contracts cannot be generated, for WFW, without this data, so that the accurate capture of such data is crucial to the success of the programme. Mapping Invasive Alien Plant (IAP) data within WFW is a perennial problem (Coetzee, pers com, 2002), because not enough mapping is being done to meet the annual requirements of the programme in the various provinces. This is re-iterated by Richardson, 2004, who states that there is a shortage of accurate data on IAP abundance in South Africa. Therefore there is a need to investigate alternate methods of data capture; such as remote sensing, whilst working within the existing WFW data capture standards. The aim of this research was to investigate the use of Landsat ETM imagery as a data capture source for mapping alien vegetation for the WFW Programme in terms of their approved mapping methods, for both automated and manual classification techniques. The automated and manual classification results were compared to control data captured by differential Global Positioning Systems (DGPS). The research tested the various methods of data capture using Landsat ETM images over a range of study sites of varying complexity: a simple grassland area, a medium complexity grassy fynbos site and a complicated indigenous forest site. An important component of the research was to develop a mapping (classification) Ranking System based upon variables identified by WFW as fundamental in data capture decision making: spatial and positional accuracy, time constraints and cost constraints for three typical alien invaded areas. The mapping Ranking System compared the results of the various mapping methods for each factor for the study sites against each other. This provided an indication of which mapping method is the most efficient or suitable for a particular area.
- Full Text:
- Date Issued: 2007
The use of thermal modelling in improving rural subsistence aquaculture
- Authors: Bailey, Dylan Francis
- Date: 2007
- Subjects: Sustainable aquaculture -- South Africa , Aquaculture industry -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10715 , http://hdl.handle.net/10948/473 , Sustainable aquaculture -- South Africa , Aquaculture industry -- South Africa
- Description: There has been a long history of attempts to promote subsistence rural aquaculture within South Africa. Many of these attempts have failed due to inadequate support from government and support agencies. There has been a recent revived interest in promoting rural aquaculture development. Presented in this project are six scenarios demonstrating the potential application of thermal modelling techniques to improving subsistence rural aquaculture. These scenarios were based on a model validated against a real life system, and run with environmental data for the year 2005. Bovine manure, grass thatch, cereal straw and Typha spp. water reeds were tested for thermal performance. These results were then applied to the scenarios. The open and kraal enclosed pond scenarios yielded the widest deviation in temperatures throughout the year, with an average temperature of 3.8oC and 6.0oC above ambient and a temperature range of 10.6oC and 12.4oC for the year respectively. Eliminating solar radiation and reducing wind speed resulted in an average difference of 1.5oC below ambient and a temperature range of 7.5oC for the year. When completely enclosed in a well-sealed traditional Xhosa style hut, the pond had an average difference of 5.6oC below outside ambient temperature, with a range of 7.8oC for the year. A passive solar heating scenario added to the sealed hut scenario, which when run continuously maintained an average difference of 34.7oC above outside ambient temperatures, with a range of 56oC for the year. When a hypothetical 25oC temperature control was included in the model, the system maintained an average of 7.1oC above ambient outside temperatures, with a temperature range of 0.8oC throughout the year. The wider range of temperatures made available through the use of thermal modelling approaches provides a more diverse range of species available for subsistence rural aquaculture at any site, significantly improving its potential.
- Full Text:
- Date Issued: 2007
- Authors: Bailey, Dylan Francis
- Date: 2007
- Subjects: Sustainable aquaculture -- South Africa , Aquaculture industry -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10715 , http://hdl.handle.net/10948/473 , Sustainable aquaculture -- South Africa , Aquaculture industry -- South Africa
- Description: There has been a long history of attempts to promote subsistence rural aquaculture within South Africa. Many of these attempts have failed due to inadequate support from government and support agencies. There has been a recent revived interest in promoting rural aquaculture development. Presented in this project are six scenarios demonstrating the potential application of thermal modelling techniques to improving subsistence rural aquaculture. These scenarios were based on a model validated against a real life system, and run with environmental data for the year 2005. Bovine manure, grass thatch, cereal straw and Typha spp. water reeds were tested for thermal performance. These results were then applied to the scenarios. The open and kraal enclosed pond scenarios yielded the widest deviation in temperatures throughout the year, with an average temperature of 3.8oC and 6.0oC above ambient and a temperature range of 10.6oC and 12.4oC for the year respectively. Eliminating solar radiation and reducing wind speed resulted in an average difference of 1.5oC below ambient and a temperature range of 7.5oC for the year. When completely enclosed in a well-sealed traditional Xhosa style hut, the pond had an average difference of 5.6oC below outside ambient temperature, with a range of 7.8oC for the year. A passive solar heating scenario added to the sealed hut scenario, which when run continuously maintained an average difference of 34.7oC above outside ambient temperatures, with a range of 56oC for the year. When a hypothetical 25oC temperature control was included in the model, the system maintained an average of 7.1oC above ambient outside temperatures, with a temperature range of 0.8oC throughout the year. The wider range of temperatures made available through the use of thermal modelling approaches provides a more diverse range of species available for subsistence rural aquaculture at any site, significantly improving its potential.
- Full Text:
- Date Issued: 2007
The zooplankton of Mngazana estuary
- Authors: Louw, Liezel
- Date: 2007
- Subjects: Marine zooplankton -- South Africa -- Mngazana Estuary , Mngazana Estuary (Eastern Cape, South Africa) , Estuarine ecology -- South Africa -- Mngazana Estuary , Estuarine area conservation -- South Africa -- Mngazana Estuary
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10707 , http://hdl.handle.net/10948/702 , Marine zooplankton -- South Africa -- Mngazana Estuary , Mngazana Estuary (Eastern Cape, South Africa) , Estuarine ecology -- South Africa -- Mngazana Estuary , Estuarine area conservation -- South Africa -- Mngazana Estuary
- Description: The zooplankton community of the main channel of the Mngazana estuary was investigated on six occasions over one year. Spatial and temporal variability in zooplankton abundance and distribution were sampled using two slightly modified WP2 plankton nets of 200 μm mesh and 57 cm mouth diameter. Nets were fitted with calibrated Kahlsico 005 WA 130 flow meters. A set of environmental variables were also measured at each site. The water column of the main channel of Mngazana estuary was stratified in summer but well mixed in winter. Temperature progressively increased from the lower stations to the upper reaches of the estuary. Maximum vertical temperature differences occurred in the middle estuarine reaches. Salinity progressively decreased from the lower reaches to the upper reaches, but was generally above 26 from Station 3 to Station 8. Only during November 2005, were salinity readings low due to heavy rains. Summer salinity values were always lower than the winter salinity values as a result of summer rainfall. A total of 76 zooplankton taxa were identified. The estuarine copepods Acartia natalensis and Pseudodiaptomus hessei dominated the assemblage, with maximum abundances in the middle to upper reaches. Acartia natalensis reached high densities in winter (> 50 000 m-3) although lowest abundances were recorded when maximum rainfall was received (November 2005). Wooldridge (1977) and Deyzel (2004) recorded maximum densities during summer. Pseudodiaptomus hessei reached high densities (> 17 000 m-3) during the highest rainfall month. Previous studies indicated that this pioneer species is able to recover quickly after a flood and subsequently increase rapidly in numbers. The mysid, Mesopodopsis africana reached high densities (> 5 000 m-3) in the middle estuarine reaches during summer. Ichtyofauna, brachyura and anomura were important contributors to the merozooplankton component of the community. The maximum number of species was recorded during winter in the lower estuarine reaches, when vertical differences in salinities were minimal.
- Full Text:
- Date Issued: 2007
- Authors: Louw, Liezel
- Date: 2007
- Subjects: Marine zooplankton -- South Africa -- Mngazana Estuary , Mngazana Estuary (Eastern Cape, South Africa) , Estuarine ecology -- South Africa -- Mngazana Estuary , Estuarine area conservation -- South Africa -- Mngazana Estuary
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10707 , http://hdl.handle.net/10948/702 , Marine zooplankton -- South Africa -- Mngazana Estuary , Mngazana Estuary (Eastern Cape, South Africa) , Estuarine ecology -- South Africa -- Mngazana Estuary , Estuarine area conservation -- South Africa -- Mngazana Estuary
- Description: The zooplankton community of the main channel of the Mngazana estuary was investigated on six occasions over one year. Spatial and temporal variability in zooplankton abundance and distribution were sampled using two slightly modified WP2 plankton nets of 200 μm mesh and 57 cm mouth diameter. Nets were fitted with calibrated Kahlsico 005 WA 130 flow meters. A set of environmental variables were also measured at each site. The water column of the main channel of Mngazana estuary was stratified in summer but well mixed in winter. Temperature progressively increased from the lower stations to the upper reaches of the estuary. Maximum vertical temperature differences occurred in the middle estuarine reaches. Salinity progressively decreased from the lower reaches to the upper reaches, but was generally above 26 from Station 3 to Station 8. Only during November 2005, were salinity readings low due to heavy rains. Summer salinity values were always lower than the winter salinity values as a result of summer rainfall. A total of 76 zooplankton taxa were identified. The estuarine copepods Acartia natalensis and Pseudodiaptomus hessei dominated the assemblage, with maximum abundances in the middle to upper reaches. Acartia natalensis reached high densities in winter (> 50 000 m-3) although lowest abundances were recorded when maximum rainfall was received (November 2005). Wooldridge (1977) and Deyzel (2004) recorded maximum densities during summer. Pseudodiaptomus hessei reached high densities (> 17 000 m-3) during the highest rainfall month. Previous studies indicated that this pioneer species is able to recover quickly after a flood and subsequently increase rapidly in numbers. The mysid, Mesopodopsis africana reached high densities (> 5 000 m-3) in the middle estuarine reaches during summer. Ichtyofauna, brachyura and anomura were important contributors to the merozooplankton component of the community. The maximum number of species was recorded during winter in the lower estuarine reaches, when vertical differences in salinities were minimal.
- Full Text:
- Date Issued: 2007
Trust on the semantic web
- Authors: Cloran, Russell Andrew
- Date: 2007 , 2006-08-07
- Subjects: Semantic Web , RDF (Document markup language) , XML (Document markup language) , Knowledge acquisition (Expert systems) , Data protection
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4649 , http://hdl.handle.net/10962/d1006616 , Semantic Web , RDF (Document markup language) , XML (Document markup language) , Knowledge acquisition (Expert systems) , Data protection
- Description: The Semantic Web is a vision to create a “web of knowledge”; an extension of the Web as we know it which will create an information space which will be usable by machines in very rich ways. The technologies which make up the Semantic Web allow machines to reason across information gathered from the Web, presenting only relevant results and inferences to the user. Users of the Web in its current form assess the credibility of the information they gather in a number of different ways. If processing happens without the user being able to check the source and credibility of each piece of information used in the processing, the user must be able to trust that the machine has used trustworthy information at each step of the processing. The machine should therefore be able to automatically assess the credibility of each piece of information it gathers from the Web. A case study on advanced checks for website credibility is presented, and the site presented in the case presented is found to be credible, despite failing many of the checks which are presented. A website with a backend based on RDF technologies is constructed. A better understanding of RDF technologies and good knowledge of the RAP and Redland RDF application frameworks is gained. The second aim of constructing the website was to gather information to be used for testing various trust metrics. The website did not gain widespread support, and therefore not enough data was gathered for this. Techniques for presenting RDF data to users were also developed during website development, and these are discussed. Experiences in gathering RDF data are presented next. A scutter was successfully developed, and the data smushed to create a database where uniquely identifiable objects were linked, even where gathered from different sources. Finally, the use of digital signature as a means of linking an author and content produced by that author is presented. RDF/XML canonicalisation is discussed in the provision of ideal cryptographic checking of RDF graphs, rather than simply checking at the document level. The notion of canonicalisation on the semantic, structural and syntactic levels is proposed. A combination of an existing canonicalisation algorithm and a restricted RDF/XML dialect is presented as a solution to the RDF/XML canonicalisation problem. We conclude that a trusted Semantic Web is possible, with buy in from publishing and consuming parties.
- Full Text:
- Date Issued: 2007
- Authors: Cloran, Russell Andrew
- Date: 2007 , 2006-08-07
- Subjects: Semantic Web , RDF (Document markup language) , XML (Document markup language) , Knowledge acquisition (Expert systems) , Data protection
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4649 , http://hdl.handle.net/10962/d1006616 , Semantic Web , RDF (Document markup language) , XML (Document markup language) , Knowledge acquisition (Expert systems) , Data protection
- Description: The Semantic Web is a vision to create a “web of knowledge”; an extension of the Web as we know it which will create an information space which will be usable by machines in very rich ways. The technologies which make up the Semantic Web allow machines to reason across information gathered from the Web, presenting only relevant results and inferences to the user. Users of the Web in its current form assess the credibility of the information they gather in a number of different ways. If processing happens without the user being able to check the source and credibility of each piece of information used in the processing, the user must be able to trust that the machine has used trustworthy information at each step of the processing. The machine should therefore be able to automatically assess the credibility of each piece of information it gathers from the Web. A case study on advanced checks for website credibility is presented, and the site presented in the case presented is found to be credible, despite failing many of the checks which are presented. A website with a backend based on RDF technologies is constructed. A better understanding of RDF technologies and good knowledge of the RAP and Redland RDF application frameworks is gained. The second aim of constructing the website was to gather information to be used for testing various trust metrics. The website did not gain widespread support, and therefore not enough data was gathered for this. Techniques for presenting RDF data to users were also developed during website development, and these are discussed. Experiences in gathering RDF data are presented next. A scutter was successfully developed, and the data smushed to create a database where uniquely identifiable objects were linked, even where gathered from different sources. Finally, the use of digital signature as a means of linking an author and content produced by that author is presented. RDF/XML canonicalisation is discussed in the provision of ideal cryptographic checking of RDF graphs, rather than simply checking at the document level. The notion of canonicalisation on the semantic, structural and syntactic levels is proposed. A combination of an existing canonicalisation algorithm and a restricted RDF/XML dialect is presented as a solution to the RDF/XML canonicalisation problem. We conclude that a trusted Semantic Web is possible, with buy in from publishing and consuming parties.
- Full Text:
- Date Issued: 2007
Wheat stress responses during Russian wheat aphid and Bird Cherry Oat aphid infestation: an analysis of differential protein regulation during plant biotic stress responses
- Louw, Cassandra Alexandrovna
- Authors: Louw, Cassandra Alexandrovna
- Date: 2007
- Subjects: Russian wheat aphid , Plants, Effect of stress on , Wheat -- Diseases and pests , Rhopalosiphum , Plant proteins
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:3995 , http://hdl.handle.net/10962/d1004055 , Russian wheat aphid , Plants, Effect of stress on , Wheat -- Diseases and pests , Rhopalosiphum , Plant proteins
- Description: Plants possess a complex and poorly understood network of defence mechanisms that enable them to counteract the effects of abiotic and biotic stress. Aphid phloem feeding is source of biotic stress in plants. Russian wheat aphid and Bird Cherry-Oat aphid feeding cause significant losses in the annual wheat crop, and control by conventional methods such as pesticide application, has proved to be ineffective. Infestation by the Russian wheat aphid has a particularly devastating effect in South Africa. Aphid-resistant wheat cultivars have been identified but an incomplete understanding of the mechanism of the plant’s resistance thwarts the development of improved cultivars. A two-dimensional gel electrophoresis method was developed, partially optimised and validated in order to determine the effect of Russian wheat aphid and Bird Cherry-Oat aphid phloem feeding on the Betta and Betta DN wheat proteome. Differentially expressed proteins that were up or down regulated more than two fold were identified using PDQuest™ Basic software and matched to known wheat proteins stored in the SwissProt protein database on the basis of their molecular mass and isolectric point. Initial analysis of the differential protein expression of Betta and Betta DN wheat in response to Russian wheat aphid and Bird Cherry-Oat aphid phloem feeding at different growth stages revealed that younger plants display higher levels of resistance than older plants. Feeding by the Bird-Cherry Oat aphid does not result in the upregulation of proteins implicated in a defence response, which indicates that the damage incurred by the plant due to feeding by this aphid is not enough to trigger a classic defence response. Feeding by the more damaging Russian wheat aphid resulted in a stress response in susceptible wheat cultivar Betta, and a defence response in resistant wheat cultivar Betta DN. The infestation of Betta DN resulted in the upregulation of putative thaumatins and amylase trypsin inhibitors, indicating that the Betta DN resistance response could be due to the combined effect of protease inhibitors that discourage aphid phloem feeding and the activation of the salicylic acid and jasmonic acid plant defence pathways.
- Full Text:
- Date Issued: 2007
- Authors: Louw, Cassandra Alexandrovna
- Date: 2007
- Subjects: Russian wheat aphid , Plants, Effect of stress on , Wheat -- Diseases and pests , Rhopalosiphum , Plant proteins
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:3995 , http://hdl.handle.net/10962/d1004055 , Russian wheat aphid , Plants, Effect of stress on , Wheat -- Diseases and pests , Rhopalosiphum , Plant proteins
- Description: Plants possess a complex and poorly understood network of defence mechanisms that enable them to counteract the effects of abiotic and biotic stress. Aphid phloem feeding is source of biotic stress in plants. Russian wheat aphid and Bird Cherry-Oat aphid feeding cause significant losses in the annual wheat crop, and control by conventional methods such as pesticide application, has proved to be ineffective. Infestation by the Russian wheat aphid has a particularly devastating effect in South Africa. Aphid-resistant wheat cultivars have been identified but an incomplete understanding of the mechanism of the plant’s resistance thwarts the development of improved cultivars. A two-dimensional gel electrophoresis method was developed, partially optimised and validated in order to determine the effect of Russian wheat aphid and Bird Cherry-Oat aphid phloem feeding on the Betta and Betta DN wheat proteome. Differentially expressed proteins that were up or down regulated more than two fold were identified using PDQuest™ Basic software and matched to known wheat proteins stored in the SwissProt protein database on the basis of their molecular mass and isolectric point. Initial analysis of the differential protein expression of Betta and Betta DN wheat in response to Russian wheat aphid and Bird Cherry-Oat aphid phloem feeding at different growth stages revealed that younger plants display higher levels of resistance than older plants. Feeding by the Bird-Cherry Oat aphid does not result in the upregulation of proteins implicated in a defence response, which indicates that the damage incurred by the plant due to feeding by this aphid is not enough to trigger a classic defence response. Feeding by the more damaging Russian wheat aphid resulted in a stress response in susceptible wheat cultivar Betta, and a defence response in resistant wheat cultivar Betta DN. The infestation of Betta DN resulted in the upregulation of putative thaumatins and amylase trypsin inhibitors, indicating that the Betta DN resistance response could be due to the combined effect of protease inhibitors that discourage aphid phloem feeding and the activation of the salicylic acid and jasmonic acid plant defence pathways.
- Full Text:
- Date Issued: 2007