Ureaplasma species in the placenta and histopathology associated with preterm birth
- Authors: Sprong, Kaitlin Elizabeth
- Date: 2021-12
- Subjects: Port Elizabeth (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/54128 , vital:46310
- Description: The Eastern Cape province is known for its high perinatal morbidity and mortality rate. Studies from other countries indicate that Ureaplasma spp. have been associated with clinical chorioamnionitis, spontaneous preterm labor and preterm premature rupture of the fetal membranes. The prevalence of Ureaplasma urealyticum, Ureaplasma parvumand Mycoplasma hominisin the placenta and its role in preterm birth is unknown in South Africa. Objectives The objectives of this study were to: (i) analyze placental histology, maternal and neonatal outcomes and clinical presentation of preterm birth, (ii) detect Ureaplasma spp. and M. hominisin the placenta from cases of preterm birth, (iii) determine antibiotic susceptibility profiles of Ureaplasma spp. isolates and investigate mechanisms of antibiotic resistance, (iv) characterize the microbial diversity in the placenta using 16S rRNA next generation sequencing and(v) review pathologies to ascertain whether there is any association between Ureaplasma spp. in the placenta and adverse maternal, obstetric and neonatal outcomes. iiiABSTRACTBackground The Eastern Cape province is known for its high perinatal morbidity and mortality rate. Studies from other countries indicate that Ureaplasmaspp. have been associated with clinical chorioamnionitis, spontaneous preterm labor and preterm premature rupture of the fetal membranes. The prevalenceof Ureaplasmaurealyticum,UreaplasmaparvumandMycoplasmahominisin the placenta andits role in preterm birth is unknown in South Africa. Objectives The objectives of this study were to: (i) analyze placental histology, maternal and neonatal outcomes and clinical presentation of preterm birth, (ii) detect Ureaplasmaspp. and M. hominisin the placenta from cases of preterm birth, (iii) determine antibiotic susceptibility profiles of Ureaplasmaspp. isolates and investigate mechanisms of antibiotic resistance, (iv) characterize the microbial diversity in the placenta using 16S rRNA next generation sequencing and(v) review pathologies to ascertain whether there is any association between Ureaplasmaspp. inthe placenta and adverse maternal, obstetric and neonatal outcomes. MethodsPlacentas were collected from patients presenting with preterm birth (n=100; 28-34 weeks gestational age) and term birth (n=20; >38 weeks) regardless of the APGAR score. Placentas were submitted for histopathology and used for detection of Ureaplasmaspp. by culture (U9 broth, MycoDuo kits;BioRad) and PCR (DNA was extracted from culture and homogenized placental tissue). Antibiotic susceptibility profiles of Ureaplasmaspp isolates were determined by the SIR Antibiogram kit (BioRad) and microbroth dilution method. Molecular mechanisms of resistance were ascertained by PCR amplification of target genes. Placentas were sent to National Health Laboratory Servicesfor routine histopathology. Next generation sequencing was performed on 16S rRNA amplicons from placental DNA for analysis of microbial diversity. , Thesis (PhD) -- Faculty of Science, Journalsim and Media Studies, 2021
- Full Text:
- Date Issued: 2021-12
- Authors: Sprong, Kaitlin Elizabeth
- Date: 2021-12
- Subjects: Port Elizabeth (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/54128 , vital:46310
- Description: The Eastern Cape province is known for its high perinatal morbidity and mortality rate. Studies from other countries indicate that Ureaplasma spp. have been associated with clinical chorioamnionitis, spontaneous preterm labor and preterm premature rupture of the fetal membranes. The prevalence of Ureaplasma urealyticum, Ureaplasma parvumand Mycoplasma hominisin the placenta and its role in preterm birth is unknown in South Africa. Objectives The objectives of this study were to: (i) analyze placental histology, maternal and neonatal outcomes and clinical presentation of preterm birth, (ii) detect Ureaplasma spp. and M. hominisin the placenta from cases of preterm birth, (iii) determine antibiotic susceptibility profiles of Ureaplasma spp. isolates and investigate mechanisms of antibiotic resistance, (iv) characterize the microbial diversity in the placenta using 16S rRNA next generation sequencing and(v) review pathologies to ascertain whether there is any association between Ureaplasma spp. in the placenta and adverse maternal, obstetric and neonatal outcomes. iiiABSTRACTBackground The Eastern Cape province is known for its high perinatal morbidity and mortality rate. Studies from other countries indicate that Ureaplasmaspp. have been associated with clinical chorioamnionitis, spontaneous preterm labor and preterm premature rupture of the fetal membranes. The prevalenceof Ureaplasmaurealyticum,UreaplasmaparvumandMycoplasmahominisin the placenta andits role in preterm birth is unknown in South Africa. Objectives The objectives of this study were to: (i) analyze placental histology, maternal and neonatal outcomes and clinical presentation of preterm birth, (ii) detect Ureaplasmaspp. and M. hominisin the placenta from cases of preterm birth, (iii) determine antibiotic susceptibility profiles of Ureaplasmaspp. isolates and investigate mechanisms of antibiotic resistance, (iv) characterize the microbial diversity in the placenta using 16S rRNA next generation sequencing and(v) review pathologies to ascertain whether there is any association between Ureaplasmaspp. inthe placenta and adverse maternal, obstetric and neonatal outcomes. MethodsPlacentas were collected from patients presenting with preterm birth (n=100; 28-34 weeks gestational age) and term birth (n=20; >38 weeks) regardless of the APGAR score. Placentas were submitted for histopathology and used for detection of Ureaplasmaspp. by culture (U9 broth, MycoDuo kits;BioRad) and PCR (DNA was extracted from culture and homogenized placental tissue). Antibiotic susceptibility profiles of Ureaplasmaspp isolates were determined by the SIR Antibiogram kit (BioRad) and microbroth dilution method. Molecular mechanisms of resistance were ascertained by PCR amplification of target genes. Placentas were sent to National Health Laboratory Servicesfor routine histopathology. Next generation sequencing was performed on 16S rRNA amplicons from placental DNA for analysis of microbial diversity. , Thesis (PhD) -- Faculty of Science, Journalsim and Media Studies, 2021
- Full Text:
- Date Issued: 2021-12
The use of psychometric test systems as a pre-selection tool for identifying successful harvesting machine operators
- Authors: Schwegman, Kylle
- Date: 2022-04
- Subjects: Port Elizabeth (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Doctoral theses , text
- Identifier: http://hdl.handle.net/10948/55246 , vital:51102
- Description: A shift towards fully mechanized forest activities, such as harvesting and, more recently, silviculture, has occurred from the early 2 000’s. The reason for mechanizing these activities differs for each country, although for most countries there is concern relating to the health and safety of forest workers. With mechanization in harvesting, the forest worker has moved away from the physical intensity of having to fell, debranch, debark and cross-cut trees into logs using either an axe or chainsaw, to operating a machine. Studies revolving around the human element (operator) have been conducted specifically relating to the ergonomics of the machines and how operators may influence machine productivity. Results showed that due to the repetitive nature of the work, the operators are exposed to associated stresses for longer periods. Typical injuries associated to these kinds of stressors are whole body vibrations (WBVs), repetitive hand and arm movements, non-neutral body postures and manual lifting, which lead to musculoskeletal symptoms in the lower back, neck and shoulders. However, as machine technology improves so does the ergonomic conditions which are experienced by machine operators. Machine productivity can be influenced by various factors, with the most influential being tree volume. However, a recent study showed that over 40% of variation in machine productivity has been observed amongst different machine operators operating similar machines. The specific reason for these differences has yet to be determined. However, decision making, motivation, planning capacity, concentration, memory, motor coordination, pattern recognition, logic reasoning, and spatial perception are abilities that have been described as important for successful harvesting work. The pre-selection of operators using psychometric and cognitive tests is not new to forestry, although very little information is available relating to the aptitude test known as the Vienna test system as well as the best possible demographic associated with successful harvesting operators. The overall aim of this study was to determine whether the high variation found amongst harvesting machine operators could be reduced initially through a preselection process which involves the use of aptitude tests (Vienna Test System) and demographic questionnaires. A study was implemented in Zululand, South Africa, testing whether there were significant productivity differences between nine machine operators. , Thesis (PhD) -- Faculty of Science, School of Natural Resource Management, 2022
- Full Text:
- Date Issued: 2022-04
- Authors: Schwegman, Kylle
- Date: 2022-04
- Subjects: Port Elizabeth (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Doctoral theses , text
- Identifier: http://hdl.handle.net/10948/55246 , vital:51102
- Description: A shift towards fully mechanized forest activities, such as harvesting and, more recently, silviculture, has occurred from the early 2 000’s. The reason for mechanizing these activities differs for each country, although for most countries there is concern relating to the health and safety of forest workers. With mechanization in harvesting, the forest worker has moved away from the physical intensity of having to fell, debranch, debark and cross-cut trees into logs using either an axe or chainsaw, to operating a machine. Studies revolving around the human element (operator) have been conducted specifically relating to the ergonomics of the machines and how operators may influence machine productivity. Results showed that due to the repetitive nature of the work, the operators are exposed to associated stresses for longer periods. Typical injuries associated to these kinds of stressors are whole body vibrations (WBVs), repetitive hand and arm movements, non-neutral body postures and manual lifting, which lead to musculoskeletal symptoms in the lower back, neck and shoulders. However, as machine technology improves so does the ergonomic conditions which are experienced by machine operators. Machine productivity can be influenced by various factors, with the most influential being tree volume. However, a recent study showed that over 40% of variation in machine productivity has been observed amongst different machine operators operating similar machines. The specific reason for these differences has yet to be determined. However, decision making, motivation, planning capacity, concentration, memory, motor coordination, pattern recognition, logic reasoning, and spatial perception are abilities that have been described as important for successful harvesting work. The pre-selection of operators using psychometric and cognitive tests is not new to forestry, although very little information is available relating to the aptitude test known as the Vienna test system as well as the best possible demographic associated with successful harvesting operators. The overall aim of this study was to determine whether the high variation found amongst harvesting machine operators could be reduced initially through a preselection process which involves the use of aptitude tests (Vienna Test System) and demographic questionnaires. A study was implemented in Zululand, South Africa, testing whether there were significant productivity differences between nine machine operators. , Thesis (PhD) -- Faculty of Science, School of Natural Resource Management, 2022
- Full Text:
- Date Issued: 2022-04
The use of ambient seismic noise to investigate internal changes in a tailings storage facility and to image the subsurface geology in the Cradock area of the Eastern Cape
- Authors: Kunjwa, Thulisile
- Date: 2021-12
- Subjects: Port Elizabeth (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/53642 , vital:45690
- Description: Passive seismic interferometry is a process by which ambient noise data recorded at different seismic stations can be cross-correlated to estimate Green's functions. In the past, both surface waves and body waves have successfully been extracted by cross-correlation of ambient noise data on both regional and global scales. Recent advancements in ambient seismic noise techniques have the potential to provide new methods for subsurface imaging and monitoring. The ambient noise data processing procedure divides into four principal phases: (1) single station data preparation, (2) cross-correlation and temporal stacking, (3) measurement of dispersion curves and (4) inversion of dispersion curves to obtain 1-D shear wave profiles and computation of 2-D shear wave velocity cross-section. The purpose of this study is to investigate whether ambient seismic noise can be used to image and detect internal changes within a mine tailings dam wall and to image the subsurface geology of part of the Eastern Cape Karoo near Cradock. In the first experiment, the investigation consisted of continuous ambient noise data recordings over a period of 3 days with 20 three-component short period geophones. The geophones were deployed over a survey wall of roughly 100 m in length at the Harmony Gold mine tailings dam in Welkom. In the second experiment, the investigation consisted of data recordings over a period of 35 days. The geophones were deployed in Cradock. The first phase of the data processing procedure included de-trending, de-meaning and band-pass filtering the data. This was done to ensure that any long period trends associated with instrument glitches are removed from the data. A spectrogram was then computed to view the spectrum of frequencies in the signal and to check if the filter that was designed was able to cut off the unwanted frequencies. The horizontal and vertical components of the ambient noise data were cross-correlated and picked between sensor pairs to create surface wave dispersion curves. Subsequently, the dispersion curves were inverted to estimate the shear wave velocity of the dam wall and subsurface as a function of depth. The computed cross sections of shear wave velocity indicated a low-velocity zone between 2 and 10 m below the surface on the dam wall, this suggested that the phreatic surface is much closer to surface in this area. In the second experiment, the interpolated shear wave velocity profiles indicated that there is a layer of low velocity zone between depths 250 to 300 m below the surface. The cross-correlations were also used to compute group velocity maps from periods 1.5 seconds to 30 seconds. The group velocity maps showed various high and low velocity anomalies. The high velocity zones observed on the eastern section of the map were interpreted as evidence of dolerite intrusions. The low velocity zones observed in the western and southern sections of the map interpreted as Karoo sediments that belong to the Adelaide Subgroup which is dominated by mudstones. , Thesis (MSc) -- Faculty of Science, Department of Geosciences (Geology and Geography), 2021
- Full Text:
- Date Issued: 2021-12
- Authors: Kunjwa, Thulisile
- Date: 2021-12
- Subjects: Port Elizabeth (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/53642 , vital:45690
- Description: Passive seismic interferometry is a process by which ambient noise data recorded at different seismic stations can be cross-correlated to estimate Green's functions. In the past, both surface waves and body waves have successfully been extracted by cross-correlation of ambient noise data on both regional and global scales. Recent advancements in ambient seismic noise techniques have the potential to provide new methods for subsurface imaging and monitoring. The ambient noise data processing procedure divides into four principal phases: (1) single station data preparation, (2) cross-correlation and temporal stacking, (3) measurement of dispersion curves and (4) inversion of dispersion curves to obtain 1-D shear wave profiles and computation of 2-D shear wave velocity cross-section. The purpose of this study is to investigate whether ambient seismic noise can be used to image and detect internal changes within a mine tailings dam wall and to image the subsurface geology of part of the Eastern Cape Karoo near Cradock. In the first experiment, the investigation consisted of continuous ambient noise data recordings over a period of 3 days with 20 three-component short period geophones. The geophones were deployed over a survey wall of roughly 100 m in length at the Harmony Gold mine tailings dam in Welkom. In the second experiment, the investigation consisted of data recordings over a period of 35 days. The geophones were deployed in Cradock. The first phase of the data processing procedure included de-trending, de-meaning and band-pass filtering the data. This was done to ensure that any long period trends associated with instrument glitches are removed from the data. A spectrogram was then computed to view the spectrum of frequencies in the signal and to check if the filter that was designed was able to cut off the unwanted frequencies. The horizontal and vertical components of the ambient noise data were cross-correlated and picked between sensor pairs to create surface wave dispersion curves. Subsequently, the dispersion curves were inverted to estimate the shear wave velocity of the dam wall and subsurface as a function of depth. The computed cross sections of shear wave velocity indicated a low-velocity zone between 2 and 10 m below the surface on the dam wall, this suggested that the phreatic surface is much closer to surface in this area. In the second experiment, the interpolated shear wave velocity profiles indicated that there is a layer of low velocity zone between depths 250 to 300 m below the surface. The cross-correlations were also used to compute group velocity maps from periods 1.5 seconds to 30 seconds. The group velocity maps showed various high and low velocity anomalies. The high velocity zones observed on the eastern section of the map were interpreted as evidence of dolerite intrusions. The low velocity zones observed in the western and southern sections of the map interpreted as Karoo sediments that belong to the Adelaide Subgroup which is dominated by mudstones. , Thesis (MSc) -- Faculty of Science, Department of Geosciences (Geology and Geography), 2021
- Full Text:
- Date Issued: 2021-12
The use of a rapid incineration field test for determining soil organic carbon in the Southern Cape Region
- Authors: Ackhurst, Albert Arthur
- Date: 2014-12
- Subjects: Port Elizabeth (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/53336 , vital:45135
- Description: Knowledge of soil organic carbon levels is important both for agricultural effectiveness and soil carbon sequestration accounting, especially against the backdrop of increased climate change impacts and pressure on food production landscapes. However, current methods for soil carbon determination are expensive, energy intensive, time consuming and potentially hazardous leading to a call for alternative methods, which should be cheap, fast, simple, accurate, safe and usable where resources and soil analysis laboratories are limited. To this end the student invented a novel rapid incineration field test (RIFT) for determining soil organic carbon and tested its validity in this study. This method incorporates principles found in dry combustion as well as loss-on-ignition and quantifying organic carbon through gravimetric analysis. In order to illustrate effectiveness and accuracy it was necessary to correlate RIFT with a reference method, in this instance dry combustion with a Leco device as well as another commonly used indirect method namely the Walkley-Black wet chemical oxidation method. Samples from eleven soil forms were collected from the Southern Cape region and they were subjected to the three testing methods. It was found that RIFT is indeed as effective and in 72% of the soil forms even more effective than Walkley-Black. Furthermore, it was ascertained whether the accuracy of RIFT can be improved by correcting for clay content. The correlation of RIFT with clay % was not very significant and clay % as a variable was therefore not used in this study to obtain further refinement of RIFT predictions. Another finding was also that RIFT illustrated less variability than both the Leco and Walkley-Black methods. Lastly it was ascertained that the RIFT device and methodology is indeed cost effective, energy efficient, fast and safe in terms of the need to use potentially hazardous chemicals. , Thesis (MA) -- Faculty of Science, School of Natural Resource Management, 2021
- Full Text:
- Date Issued: 2014-12
- Authors: Ackhurst, Albert Arthur
- Date: 2014-12
- Subjects: Port Elizabeth (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/53336 , vital:45135
- Description: Knowledge of soil organic carbon levels is important both for agricultural effectiveness and soil carbon sequestration accounting, especially against the backdrop of increased climate change impacts and pressure on food production landscapes. However, current methods for soil carbon determination are expensive, energy intensive, time consuming and potentially hazardous leading to a call for alternative methods, which should be cheap, fast, simple, accurate, safe and usable where resources and soil analysis laboratories are limited. To this end the student invented a novel rapid incineration field test (RIFT) for determining soil organic carbon and tested its validity in this study. This method incorporates principles found in dry combustion as well as loss-on-ignition and quantifying organic carbon through gravimetric analysis. In order to illustrate effectiveness and accuracy it was necessary to correlate RIFT with a reference method, in this instance dry combustion with a Leco device as well as another commonly used indirect method namely the Walkley-Black wet chemical oxidation method. Samples from eleven soil forms were collected from the Southern Cape region and they were subjected to the three testing methods. It was found that RIFT is indeed as effective and in 72% of the soil forms even more effective than Walkley-Black. Furthermore, it was ascertained whether the accuracy of RIFT can be improved by correcting for clay content. The correlation of RIFT with clay % was not very significant and clay % as a variable was therefore not used in this study to obtain further refinement of RIFT predictions. Another finding was also that RIFT illustrated less variability than both the Leco and Walkley-Black methods. Lastly it was ascertained that the RIFT device and methodology is indeed cost effective, energy efficient, fast and safe in terms of the need to use potentially hazardous chemicals. , Thesis (MA) -- Faculty of Science, School of Natural Resource Management, 2021
- Full Text:
- Date Issued: 2014-12
The synthesis, empirical and theoretical studies of various (N→B) diarylborinate esters
- Authors: Manana, Pholani Sakhile
- Date: 2021-12
- Subjects: Port Elizabeth (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Doctoral theses , text
- Identifier: http://hdl.handle.net/10948/53869 , vital:46027
- Description: A series of core-functionalized borinic acids was synthesized from Grignard reagents and tributylborate and reacted with ethanolamine, amino acids, 2-pyridylmethanol as well as 2-(ethyl amino ethanol). Among the borinic acids synthesized were the ones bearing: para-(2, 15, 16, 22, 27)-methyl, (3, 20, 25)-chloro, (4, 23, 26)-fluoro, (5)-methoxy; meta-(7, 17)-methyl, (9)-fluoro; ortho-(6)-methyl, (8)-chloro, (10, 18, 19)-methoxy substituents on their respective aromatic systems. All compounds obtained by condensation of the borinic acids with the aforementioned nitrogen-containing substrates were characterized structurally by means of diffraction studies based on single crystals and found to constitute chelate esters/amides featuring covalent B-O and dative N→B bonds. The chelate compounds researched in this study could be classified into four families and represent the compounds: ethanol amine: (1) 2,2-diphenyl-1,3,2-oxazaborolidines, (2) 2,2-bis(p-tolyl)-1,3,2-oxazaborolidines, (3) 2,2-bis(p-chlorophenyl)-1,3,2-oxazaborolidines, (4) 2,2-bis(p-fluorophenyl)-1,3,2-oxazaborolidines, (5) 2,2-bis(p-methoxyphenyl)-1,3,2-oxazaborolidines, (6) 2,2-bis(o-tolyl)-1,3,2-oxazaborolidines, (7) 2,2-bis(m-tolyl)-1,3,2-oxazaborolidines, (8) 2,2-bis(o-chlorophenyl)-1,3,2-oxazaborolidines, (9) 2,2-bis(m-fluorophenyl)-1,3,2-oxazaborolidines, (10) 2,2-bis(o-methoxyphenyl)-1,3,2-oxazaborolidines. α-amino acids : (14) 4-methyl-2,2-diphenyl-1,3,2-oxazaborolidin-5-ones, (15) 2,2-bis(p-tolyl)-1,3,2-oxazaborolidin-5-ones, (16) 4-methyl-2,2-bis(p-tolyl)-1,3,2-oxazaborolidin-5-ones, (17) 4-isopropyl-2,2-bis(m-tolyl)-1,3,2-oxazaborolidin-5-ones, (18) 4-methyl-2,2-bis(o-methoxyphenyl)-1,3,2- oxazaborolidin-5-ones, (19) 4-acetamidyl-2,2-bis(o-methoxyphenyl)-1,3,2- oxazaborolidin-5-ones, (20) 4-phenylethane-2,2-bis(p-chlorophenyl)-1,3,2 oxazaborolidin-5-ones. 2-pyridylmethanol: (21) 1,3-hydroxypyridyl-2,2-diphenyl 1,3,2-oxazaborolidines, (22) 1,3-hydroxypyridyl-2,2-bis(p-tolyl)-1,3,2-oxazaborolidines, (23) 1,3-hydroxypyridyl-2,2-bis(p-fluorophenyl)-1,3,2-oxazaborolidines 2-(ethyl amino ethanol): (24) 3-ethyl-2,2-diphenyl-1,3,2-oxazaborolidines, (25) 3-ethyl-2,2-bis(p-chlorophenyl)-1,3,2-oxazaborolidines, (26) 3-ethyl-2,2-bis(p-fluorophenyl)-1,3,2-oxazaborolidines, (27) 3-ethyl-2,2-bis(p-tolyl)-1,3,2-oxazaborolidines. Apart from structural studies in the solid state, the compounds were also characterized by means of multinuclear NMR spectroscopy (1H, 11B, 13C) as well as UV/vis and FTIR. The typical 11B resonances were found in the range of (4-10 ppm). A series of characteristic metrical parameters for the compounds in the solid state as well as typical NMR shifts for the chelate target molecules was established that allowed for the determination of the coordination induced shift. The carbon atom bonded to the oxygen atom shifted upfield, while the carbon atom bonded to the nitrogen atom shifted downfield. Factors mentioned in the literature that has an influence on the hydrolytic stability on the heterocyclic borinate motif have been taken into consideration and verified for the systems researched in this study. The substitution at the nitrogen atom with one ethyl group caused the greatest increases in the N→B bond length (27) 1.714 Å, due to the increase in the nitrogen Lewis basicity, making it the least hydrolytically stable, these include compounds (24-26). Furthermore, DFT calculations were performed by employing Becke’s three parameter hybrid exchange functional with Lee–Yang–Parr functional (B3LYP) method using the Gaussian 16 program package (Rev. B01) employing the basis set 6-311++G(d,p), to corroborate and correlate the experimental findings, which gave a general R-squared value of 0.9978 for calculated vs experimental 13C chemical shifts. Thermal properties are recorded for select compounds, indicating the ΔH and the melting points. , Thesis (PhD) -- Faculty of Science, School of Biomolecular and Chemical Sciences, 2021
- Full Text:
- Date Issued: 2021-12
- Authors: Manana, Pholani Sakhile
- Date: 2021-12
- Subjects: Port Elizabeth (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Doctoral theses , text
- Identifier: http://hdl.handle.net/10948/53869 , vital:46027
- Description: A series of core-functionalized borinic acids was synthesized from Grignard reagents and tributylborate and reacted with ethanolamine, amino acids, 2-pyridylmethanol as well as 2-(ethyl amino ethanol). Among the borinic acids synthesized were the ones bearing: para-(2, 15, 16, 22, 27)-methyl, (3, 20, 25)-chloro, (4, 23, 26)-fluoro, (5)-methoxy; meta-(7, 17)-methyl, (9)-fluoro; ortho-(6)-methyl, (8)-chloro, (10, 18, 19)-methoxy substituents on their respective aromatic systems. All compounds obtained by condensation of the borinic acids with the aforementioned nitrogen-containing substrates were characterized structurally by means of diffraction studies based on single crystals and found to constitute chelate esters/amides featuring covalent B-O and dative N→B bonds. The chelate compounds researched in this study could be classified into four families and represent the compounds: ethanol amine: (1) 2,2-diphenyl-1,3,2-oxazaborolidines, (2) 2,2-bis(p-tolyl)-1,3,2-oxazaborolidines, (3) 2,2-bis(p-chlorophenyl)-1,3,2-oxazaborolidines, (4) 2,2-bis(p-fluorophenyl)-1,3,2-oxazaborolidines, (5) 2,2-bis(p-methoxyphenyl)-1,3,2-oxazaborolidines, (6) 2,2-bis(o-tolyl)-1,3,2-oxazaborolidines, (7) 2,2-bis(m-tolyl)-1,3,2-oxazaborolidines, (8) 2,2-bis(o-chlorophenyl)-1,3,2-oxazaborolidines, (9) 2,2-bis(m-fluorophenyl)-1,3,2-oxazaborolidines, (10) 2,2-bis(o-methoxyphenyl)-1,3,2-oxazaborolidines. α-amino acids : (14) 4-methyl-2,2-diphenyl-1,3,2-oxazaborolidin-5-ones, (15) 2,2-bis(p-tolyl)-1,3,2-oxazaborolidin-5-ones, (16) 4-methyl-2,2-bis(p-tolyl)-1,3,2-oxazaborolidin-5-ones, (17) 4-isopropyl-2,2-bis(m-tolyl)-1,3,2-oxazaborolidin-5-ones, (18) 4-methyl-2,2-bis(o-methoxyphenyl)-1,3,2- oxazaborolidin-5-ones, (19) 4-acetamidyl-2,2-bis(o-methoxyphenyl)-1,3,2- oxazaborolidin-5-ones, (20) 4-phenylethane-2,2-bis(p-chlorophenyl)-1,3,2 oxazaborolidin-5-ones. 2-pyridylmethanol: (21) 1,3-hydroxypyridyl-2,2-diphenyl 1,3,2-oxazaborolidines, (22) 1,3-hydroxypyridyl-2,2-bis(p-tolyl)-1,3,2-oxazaborolidines, (23) 1,3-hydroxypyridyl-2,2-bis(p-fluorophenyl)-1,3,2-oxazaborolidines 2-(ethyl amino ethanol): (24) 3-ethyl-2,2-diphenyl-1,3,2-oxazaborolidines, (25) 3-ethyl-2,2-bis(p-chlorophenyl)-1,3,2-oxazaborolidines, (26) 3-ethyl-2,2-bis(p-fluorophenyl)-1,3,2-oxazaborolidines, (27) 3-ethyl-2,2-bis(p-tolyl)-1,3,2-oxazaborolidines. Apart from structural studies in the solid state, the compounds were also characterized by means of multinuclear NMR spectroscopy (1H, 11B, 13C) as well as UV/vis and FTIR. The typical 11B resonances were found in the range of (4-10 ppm). A series of characteristic metrical parameters for the compounds in the solid state as well as typical NMR shifts for the chelate target molecules was established that allowed for the determination of the coordination induced shift. The carbon atom bonded to the oxygen atom shifted upfield, while the carbon atom bonded to the nitrogen atom shifted downfield. Factors mentioned in the literature that has an influence on the hydrolytic stability on the heterocyclic borinate motif have been taken into consideration and verified for the systems researched in this study. The substitution at the nitrogen atom with one ethyl group caused the greatest increases in the N→B bond length (27) 1.714 Å, due to the increase in the nitrogen Lewis basicity, making it the least hydrolytically stable, these include compounds (24-26). Furthermore, DFT calculations were performed by employing Becke’s three parameter hybrid exchange functional with Lee–Yang–Parr functional (B3LYP) method using the Gaussian 16 program package (Rev. B01) employing the basis set 6-311++G(d,p), to corroborate and correlate the experimental findings, which gave a general R-squared value of 0.9978 for calculated vs experimental 13C chemical shifts. Thermal properties are recorded for select compounds, indicating the ΔH and the melting points. , Thesis (PhD) -- Faculty of Science, School of Biomolecular and Chemical Sciences, 2021
- Full Text:
- Date Issued: 2021-12
The synthesis of anastrazole intermediates using continuous flow systems
- Authors: Tanyi, Sam Tambi
- Date: 2021-12
- Subjects: Port Elizabeth (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/54116 , vital:46304
- Description: In this study, the continuous flow synthesis of anastrozole intermediates were investigated using mesitylene as starting material. Anastrozole is an important drug used for the treatment of breast cancer. In the first step, mesitylene was brominated using N-bromosuccinimide to obtain 3,5-bis(bromomethyl)toluene. Selectivity became an issue due to the formation of two by-products; namely 1,3,5-tris(bromomethyl) benzene (the tribrominated by-product) and 1-(bromomethyl)-3,5-dimethylbenzene (the monobrominated by-product). Since the reaction parameters can be more precisely controlled in flow chemistry systems, we were able to optimize the formation the desired product 3,5-bis(bromomethyl)toluene. The reaction was initially optimized ina 15μLChemtrix glass micro reactor resulting in 100%conversion with 95%selectivity towards the desired product 3,5-bis(bromomethyl)toluenein 15 seconds, with a throughput of 0.006 g/h. The reaction was then scaled up in a 1.7 mLLTF reactor, equally yielding 100%conversion with 95%selectivityin 4minutes, with a throughput of2.01g/h. The bromination of mesitylene was also attempted in a homemade photochemical reactor consisting of a 3.02 polytetrafluoroethylene coil reactor and BLE-6T365 UV lamp. In this photochemical reactor, although 100%conversionwas again obtained only75%selectivity was achieved in 20minutes, with a throughput of 0.025g/h. This drop in selectivity was attributed to poorer mixing in the larger polytetrafluoroethylene coil reactor and possibly insufficient light penetration. The next step, involving the cyanation of 3,5-bis(bromomethyl)toluene to obtain 2,2'-(5-methyl-1,3-phenylene) diacetonitrilegave 100%conversion in 1 minute at 190 °C in a 1.7 mLLTFreactor, with a throughput of 5.2g/h. The subsequent methylation of 3,5-bis(cyanomethyl)toluene to obtain3,5-bis(1-cyano-1-methylethyl) toluene was investigated using a1mLpolytetrafluoroethylenecoil reactor, ultimatelyachieving99%conversionat40 °Cin 8minutes, with a throughput of 0.045g/h. Next, the bromination of3,5-bis(1-cyano-1-methylethyl)toluene using N-bromosuccinimideto yield 2,2'-(5-bromomethyl-1,3-phenylene)di(2-methyl propionitrile) gave 100%conversion at 120 °C in 4 minutes, with a throughput of 0.35g/h. Lastly, the multistep synthesis of 3,5-bis(cyanomethyl)toluene was done in two integrated 1.7 mLLTF reactors, using the predetermined optimum conditions to achieve 94%conversion towards 3,5-bis(cyanomethyl)toluene with a total r , Thesis (MSc) -- Faculty of Science, School of Biomolecular and Chemical Sciences, 2021
- Full Text:
- Date Issued: 2021-12
- Authors: Tanyi, Sam Tambi
- Date: 2021-12
- Subjects: Port Elizabeth (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/54116 , vital:46304
- Description: In this study, the continuous flow synthesis of anastrozole intermediates were investigated using mesitylene as starting material. Anastrozole is an important drug used for the treatment of breast cancer. In the first step, mesitylene was brominated using N-bromosuccinimide to obtain 3,5-bis(bromomethyl)toluene. Selectivity became an issue due to the formation of two by-products; namely 1,3,5-tris(bromomethyl) benzene (the tribrominated by-product) and 1-(bromomethyl)-3,5-dimethylbenzene (the monobrominated by-product). Since the reaction parameters can be more precisely controlled in flow chemistry systems, we were able to optimize the formation the desired product 3,5-bis(bromomethyl)toluene. The reaction was initially optimized ina 15μLChemtrix glass micro reactor resulting in 100%conversion with 95%selectivity towards the desired product 3,5-bis(bromomethyl)toluenein 15 seconds, with a throughput of 0.006 g/h. The reaction was then scaled up in a 1.7 mLLTF reactor, equally yielding 100%conversion with 95%selectivityin 4minutes, with a throughput of2.01g/h. The bromination of mesitylene was also attempted in a homemade photochemical reactor consisting of a 3.02 polytetrafluoroethylene coil reactor and BLE-6T365 UV lamp. In this photochemical reactor, although 100%conversionwas again obtained only75%selectivity was achieved in 20minutes, with a throughput of 0.025g/h. This drop in selectivity was attributed to poorer mixing in the larger polytetrafluoroethylene coil reactor and possibly insufficient light penetration. The next step, involving the cyanation of 3,5-bis(bromomethyl)toluene to obtain 2,2'-(5-methyl-1,3-phenylene) diacetonitrilegave 100%conversion in 1 minute at 190 °C in a 1.7 mLLTFreactor, with a throughput of 5.2g/h. The subsequent methylation of 3,5-bis(cyanomethyl)toluene to obtain3,5-bis(1-cyano-1-methylethyl) toluene was investigated using a1mLpolytetrafluoroethylenecoil reactor, ultimatelyachieving99%conversionat40 °Cin 8minutes, with a throughput of 0.045g/h. Next, the bromination of3,5-bis(1-cyano-1-methylethyl)toluene using N-bromosuccinimideto yield 2,2'-(5-bromomethyl-1,3-phenylene)di(2-methyl propionitrile) gave 100%conversion at 120 °C in 4 minutes, with a throughput of 0.35g/h. Lastly, the multistep synthesis of 3,5-bis(cyanomethyl)toluene was done in two integrated 1.7 mLLTF reactors, using the predetermined optimum conditions to achieve 94%conversion towards 3,5-bis(cyanomethyl)toluene with a total r , Thesis (MSc) -- Faculty of Science, School of Biomolecular and Chemical Sciences, 2021
- Full Text:
- Date Issued: 2021-12
The impact of transformed landscapes on the resource selection and occupancy of specialized browsing species in a lowland fynbos and renosterveld ecosystem
- Swanepoel, Hermanus Izak Johannes
- Authors: Swanepoel, Hermanus Izak Johannes
- Date: 2021-12
- Subjects: Port Elizabeth (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/54132 , vital:46308
- Description: Human activities have dramatically transformed the natural environment over the last century. In most cases these activities have resulted in the destruction and fragmentation of habitats. However, in some areas the transformation of landscapes through agriculture have created novel habitats which could benefit some species. The effect of these transformed landscapes on the resource selection and occupancy of antelope species in different vegetation types such as fynbos and renosterveld are still understudied. In order to investigate this,we conducted a study in the Overberg region of the Western Cape, South Africa. We studied theoccupancy and habitat useof five specialist browsing species (Tragelaphus scriptus sylvaticus(bushbuck), Rhaphicerus melanotis(cape grysbok), Sylvicapra grimmia(common duiker), Palea Capreolus(grey rhebok) and Rhaphicerus campestris(steenbok)) within a transformed landscape. We collected speciesdetection/ non-detectionand presence/ absence data using camera traps and road strip counts.Usinga single season, single species occupancy framework as a surrogate for habitat usewedeterminedhow transformed landscapes affected their occupancy. Using aniche factor analysis and resource selection functions wedetermine how transformed landscapes affected the resource selectionof these species. Our results from the resource selection analysis indicated that steenbok, grey rhebok, andcommon duiker included crops such as wheat and planted pastures in their resource selection while also including natural vegetation. Cape grysbok and bushbuck selected predominantly for natural vegetation areas such as critical biodiversity areas and ecological support areas while also including some crops in their resource selection. Our results from the occupancy analysis indicatedthat steenbok, grey rhebok and common duiker had a higher occupancy in the transformed landscape than in the natural landscape. Bushbuck and Cape grysbok showed little to no difference in their occupancy between land use types. The insight provided by our results will allow practitioners to maximise the potentialof these mosaic landscape in the Overberg for mammal conservation.The study also provides a baseline from which further research and monitoring programs can be developed to further understand the dynamics of this landscape. , Thesis (MSc) -- Faculty of Science, School of Natural Resource Management, 2021
- Full Text:
- Date Issued: 2021-12
- Authors: Swanepoel, Hermanus Izak Johannes
- Date: 2021-12
- Subjects: Port Elizabeth (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/54132 , vital:46308
- Description: Human activities have dramatically transformed the natural environment over the last century. In most cases these activities have resulted in the destruction and fragmentation of habitats. However, in some areas the transformation of landscapes through agriculture have created novel habitats which could benefit some species. The effect of these transformed landscapes on the resource selection and occupancy of antelope species in different vegetation types such as fynbos and renosterveld are still understudied. In order to investigate this,we conducted a study in the Overberg region of the Western Cape, South Africa. We studied theoccupancy and habitat useof five specialist browsing species (Tragelaphus scriptus sylvaticus(bushbuck), Rhaphicerus melanotis(cape grysbok), Sylvicapra grimmia(common duiker), Palea Capreolus(grey rhebok) and Rhaphicerus campestris(steenbok)) within a transformed landscape. We collected speciesdetection/ non-detectionand presence/ absence data using camera traps and road strip counts.Usinga single season, single species occupancy framework as a surrogate for habitat usewedeterminedhow transformed landscapes affected their occupancy. Using aniche factor analysis and resource selection functions wedetermine how transformed landscapes affected the resource selectionof these species. Our results from the resource selection analysis indicated that steenbok, grey rhebok, andcommon duiker included crops such as wheat and planted pastures in their resource selection while also including natural vegetation. Cape grysbok and bushbuck selected predominantly for natural vegetation areas such as critical biodiversity areas and ecological support areas while also including some crops in their resource selection. Our results from the occupancy analysis indicatedthat steenbok, grey rhebok and common duiker had a higher occupancy in the transformed landscape than in the natural landscape. Bushbuck and Cape grysbok showed little to no difference in their occupancy between land use types. The insight provided by our results will allow practitioners to maximise the potentialof these mosaic landscape in the Overberg for mammal conservation.The study also provides a baseline from which further research and monitoring programs can be developed to further understand the dynamics of this landscape. , Thesis (MSc) -- Faculty of Science, School of Natural Resource Management, 2021
- Full Text:
- Date Issued: 2021-12
The effect of silicon on palladium migration in pyrolytic carbon and graphite
- Authors: Downey, Justin Michael
- Date: 2021-12
- Subjects: Port Elizabeth (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Doctoral theses , text
- Identifier: http://hdl.handle.net/10948/53665 , vital:45684
- Description: The pebble-bed reactor (PBR) is a graphite-moderated, gas-cooled high temperature nuclear reactor design and it is one of six nuclear reactor concepts included in the Generation IV initiative. Pebble-bed reactors use spherical fuel elements (called pebbles) which consist of pyrolytic graphite (which acts as the moderator) and contain thousands of micro-fuel particles called tristructural isotropic (TRISO) particles. These TRISO fuel particles consist of a fissile material (such as U235 in oxide or carbide form) surrounded by a carbon buffer layer, a pyrolytic carbon (PyC) layer, a silicon carbide (SiC) ceramic layer for structural integrity and metallic fission product containment, and an outer PyC layer. The PBR is claimed to be a passively safe design. The commercial development of the first pebble bed reactor was that of the German AVR reactor (German: Arbeitsgemeinschaft Versuchsreaktor) developed during the 1960s. The AVR design was later updated and marketed by a company called HTR. In 1999 the South African electricity company ESKOM obtained the right to access the HTR engineering database that included details of the Siemens/Interatom HTR-Module design. ESKOM worked with HTR on a new design and dubbed it the pebble bed modular reactor (PBMR). The PBMR Co. Ltd. was formed in 1999 and mandated to license and build PBMR reactors. One of the safety considerations which emerged from research is that of metal fission product release from the TRISO fuel particles. Ag110m is a radioactive metallic fission product found to have been released from intact TRISO particles. The release of this Ag isotope is of particular concern because it is highly gamma active and has a half-life of approximately 250 days, resulting in unsafe environments for maintenance workers of PBRs. During the past four decades, many different mechanisms for Ag transport in SiC and release from TRISO particles have been proposed. A promising more recent mechanism suggests that the metallic fission product palladium (Pd) plays a significant role in the transport and release of Ag from intact TRISO particles. In this mechanism Ag transport in irradiated TRISO particle fuel takes place in the presence of the fission product Pd. The Pd reacts with the SiC layer and penetrates the SiC layer along grain boundaries to form a silicide layer which provides a rapid diffusion path for Ag in the SiC. The presence of thin silicide layers in irradiated TRISO particles was subsequently confirmed. , Thesis (PhD) -- Faculty of Science, School of Computer Science, Mathematics, Physics and Statistics, 2021
- Full Text: false
- Date Issued: 2021-12
- Authors: Downey, Justin Michael
- Date: 2021-12
- Subjects: Port Elizabeth (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Doctoral theses , text
- Identifier: http://hdl.handle.net/10948/53665 , vital:45684
- Description: The pebble-bed reactor (PBR) is a graphite-moderated, gas-cooled high temperature nuclear reactor design and it is one of six nuclear reactor concepts included in the Generation IV initiative. Pebble-bed reactors use spherical fuel elements (called pebbles) which consist of pyrolytic graphite (which acts as the moderator) and contain thousands of micro-fuel particles called tristructural isotropic (TRISO) particles. These TRISO fuel particles consist of a fissile material (such as U235 in oxide or carbide form) surrounded by a carbon buffer layer, a pyrolytic carbon (PyC) layer, a silicon carbide (SiC) ceramic layer for structural integrity and metallic fission product containment, and an outer PyC layer. The PBR is claimed to be a passively safe design. The commercial development of the first pebble bed reactor was that of the German AVR reactor (German: Arbeitsgemeinschaft Versuchsreaktor) developed during the 1960s. The AVR design was later updated and marketed by a company called HTR. In 1999 the South African electricity company ESKOM obtained the right to access the HTR engineering database that included details of the Siemens/Interatom HTR-Module design. ESKOM worked with HTR on a new design and dubbed it the pebble bed modular reactor (PBMR). The PBMR Co. Ltd. was formed in 1999 and mandated to license and build PBMR reactors. One of the safety considerations which emerged from research is that of metal fission product release from the TRISO fuel particles. Ag110m is a radioactive metallic fission product found to have been released from intact TRISO particles. The release of this Ag isotope is of particular concern because it is highly gamma active and has a half-life of approximately 250 days, resulting in unsafe environments for maintenance workers of PBRs. During the past four decades, many different mechanisms for Ag transport in SiC and release from TRISO particles have been proposed. A promising more recent mechanism suggests that the metallic fission product palladium (Pd) plays a significant role in the transport and release of Ag from intact TRISO particles. In this mechanism Ag transport in irradiated TRISO particle fuel takes place in the presence of the fission product Pd. The Pd reacts with the SiC layer and penetrates the SiC layer along grain boundaries to form a silicide layer which provides a rapid diffusion path for Ag in the SiC. The presence of thin silicide layers in irradiated TRISO particles was subsequently confirmed. , Thesis (PhD) -- Faculty of Science, School of Computer Science, Mathematics, Physics and Statistics, 2021
- Full Text: false
- Date Issued: 2021-12
The co-evolution of Africa’s eastern margin and its primate fauna: implications for hominin evolution
- Authors: Mambalu, Philasande
- Date: 2022-12
- Subjects: Port Elizabeth (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/59755 , vital:62418
- Description: I investigated potential links between the diversification of African primate lineages and the physical evolution of the continent. I compared published phylogenetic trees based on mitochondrial and nuclear DNA for five clades: (a) Lorisoidea (galagos and pottos); (b) arboreal guenon monkeys (Cercopithecus and its allies); (c) living apes (including humans); (d) Papionini (baboons); and (e) savanna or “vervet” monkeys (Chlorocebus). I compared primate divergence dates with the ages of tectonic events, patterns of climatic change, and their palaeo-vegetational consequences. Based on present primate distributions, I estimated likely geographic locations of the divergence events. Finally, I compared the phylogenetic patterns of the primate clades with hominin evolutionary scenarios. Phylogenetic comparisons indicated three time periods when rates of speciation increased across the five primate clades: the Eocene – Oligocene transition (34 – 32 Ma); the mid-late Miocene (10 – 5 Ma); and the Pliocene – Pleistocene transition (2.7 – 2.3 Ma). Concentrated bursts of lineage splitting indicate a broadscale causal relationship between environmental change and lineage divergence. Human evolution followed similar biogeographic patterns to those of other primate clades. Tectonic events, climatic changes and palaeo-vegetational shifts are intimately connected, and have synergistic effects on biotic diversity. Tectonic events influence climatic change through their effects on oceanic circulation, planetary temperatures and rainfall patterns. Additionally, tectonic uplift and erosion may create geographic barriers to organismal dispersal across the continent, increasing the likelihood of geographic separation of populations and speciation. Recently evolved primate species show high levels of hybridisation for several generations after their initial divergence. Genus Homo generated ~10 species over 2.5 Ma. The emergence of these taxa likely involved substantial hybridisation, as demonstrated by the presence of Neanderthal genes within the H. sapiens genome. I suggest that this hybridisation contributed to the difficulties palaeoanthropologists often experience in distinguishing fossil hominin taxa. , Thesis (MSc) -- Faculty of Science, School of Environmental Sciences, 2022
- Full Text:
- Date Issued: 2022-12
- Authors: Mambalu, Philasande
- Date: 2022-12
- Subjects: Port Elizabeth (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/59755 , vital:62418
- Description: I investigated potential links between the diversification of African primate lineages and the physical evolution of the continent. I compared published phylogenetic trees based on mitochondrial and nuclear DNA for five clades: (a) Lorisoidea (galagos and pottos); (b) arboreal guenon monkeys (Cercopithecus and its allies); (c) living apes (including humans); (d) Papionini (baboons); and (e) savanna or “vervet” monkeys (Chlorocebus). I compared primate divergence dates with the ages of tectonic events, patterns of climatic change, and their palaeo-vegetational consequences. Based on present primate distributions, I estimated likely geographic locations of the divergence events. Finally, I compared the phylogenetic patterns of the primate clades with hominin evolutionary scenarios. Phylogenetic comparisons indicated three time periods when rates of speciation increased across the five primate clades: the Eocene – Oligocene transition (34 – 32 Ma); the mid-late Miocene (10 – 5 Ma); and the Pliocene – Pleistocene transition (2.7 – 2.3 Ma). Concentrated bursts of lineage splitting indicate a broadscale causal relationship between environmental change and lineage divergence. Human evolution followed similar biogeographic patterns to those of other primate clades. Tectonic events, climatic changes and palaeo-vegetational shifts are intimately connected, and have synergistic effects on biotic diversity. Tectonic events influence climatic change through their effects on oceanic circulation, planetary temperatures and rainfall patterns. Additionally, tectonic uplift and erosion may create geographic barriers to organismal dispersal across the continent, increasing the likelihood of geographic separation of populations and speciation. Recently evolved primate species show high levels of hybridisation for several generations after their initial divergence. Genus Homo generated ~10 species over 2.5 Ma. The emergence of these taxa likely involved substantial hybridisation, as demonstrated by the presence of Neanderthal genes within the H. sapiens genome. I suggest that this hybridisation contributed to the difficulties palaeoanthropologists often experience in distinguishing fossil hominin taxa. , Thesis (MSc) -- Faculty of Science, School of Environmental Sciences, 2022
- Full Text:
- Date Issued: 2022-12
The aesthetics of hegemony: a speculative design proposal exploring the convergence of surveillance capitalism and brain-computer interface technologies in the future
- Authors: Davies, James Tibbott
- Date: 2021-12
- Subjects: Port Elizabeth (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/54417 , vital:46517
- Description: This study examines the power dynamics of surveillance capitalism, and its role in shaping cultural hegemony. The research was expressed using graphic design to illustrate a (potential) future where Brain-Computer Interfaces (BCIs) and surveillance capitalism converge. The critique focused on Google and Facebook’s hegemony in the data-surveillance marketplace and what role this has in shaping global discourse. Both companies are funding the development of BCIs, with the aim of using brain signals as a means of interacting with the digital world, which would give the two biggest advertising companies in the world access to new sources of data. A speculative design framework was utilized to visually question the societal implications of this emerging technology and the funding behind its development. A theoretical investigation of the concepts underpinning critical theory and critical design was conducted to help clarify and critically inform this methodological approach, promoting the use of practice-based design as a critically reflective investigative tool. The resulting artefacts designed using this process were showcased in the form of a website and video that act as a visual embodiment the research, demonstrating the efficacy of this approach and the value of using communication design as a mechanism to question the status quo. , Thesis (MA) -- Faculty of Humanities, School of Visual and Performing Arts, 2021
- Full Text:
- Date Issued: 2021-12
- Authors: Davies, James Tibbott
- Date: 2021-12
- Subjects: Port Elizabeth (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/54417 , vital:46517
- Description: This study examines the power dynamics of surveillance capitalism, and its role in shaping cultural hegemony. The research was expressed using graphic design to illustrate a (potential) future where Brain-Computer Interfaces (BCIs) and surveillance capitalism converge. The critique focused on Google and Facebook’s hegemony in the data-surveillance marketplace and what role this has in shaping global discourse. Both companies are funding the development of BCIs, with the aim of using brain signals as a means of interacting with the digital world, which would give the two biggest advertising companies in the world access to new sources of data. A speculative design framework was utilized to visually question the societal implications of this emerging technology and the funding behind its development. A theoretical investigation of the concepts underpinning critical theory and critical design was conducted to help clarify and critically inform this methodological approach, promoting the use of practice-based design as a critically reflective investigative tool. The resulting artefacts designed using this process were showcased in the form of a website and video that act as a visual embodiment the research, demonstrating the efficacy of this approach and the value of using communication design as a mechanism to question the status quo. , Thesis (MA) -- Faculty of Humanities, School of Visual and Performing Arts, 2021
- Full Text:
- Date Issued: 2021-12
Testing alternative Pinus species and hybrids for the South African structural pole market
- Authors: Ndovela, Lisakhanya Sizo
- Date: 2021-04
- Subjects: Gqeberha (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/52002 , vital:43435
- Description: According to the South African National Standards, only Pinus canariensis, Pinus pinaster and Pinus radiata are suitable to be used as structural softwood poles. Of the three Pinus species mentioned, only P. radiata is still planted in South Africa and its future and availability is uncertain. The lack of availability of structural pine poles necessitates the South African forestry industry to look at alternative softwood species to plant. The broad aim of this study was to determine whether there are alternative Pinus species or hybrids that can be planted in South Africa’s Western and Southern Cape areas that will have suitable properties to be used as a resource for structural poles. This document reports on the testing of the strength and stiffness, as well as other relevant properties, of poles from several Pinus species and Pinus hybrids. The poles were derived from thinned eight-year-old tree stands in Knysna, Western Cape. Poles were peeled, kiln dried and graded before bending tests were carried out. Species and hybrids were also assessed for differences within a tree along the length. Also, the correlation between modulus of rupture (MOR), modulus of elasticity (MOE) and wood grading properties was evaluated. The results showed that there was a highly significant effect of species and log position on the mean MOR of the poles. In general, poles from the bottom of the tree had a higher mean MOR than poles from the top of the tree. There was also a highly significant effect of species and pole position on the mean MOE of poles, with poles at the top of the trees generally having higher MOE values. A very concerning finding was that the 5th percentile MOR and mean MOE values of all the species were far lower than required by SANS 10163-1 (2003). Even for the best performing species, P. radiata, the MOR 5th percentile value was less than half the required value, while the mean MOE was also 39% lower than the required mean MOE. Apart from P. radiata, the P. maximinoi performed the best of all species and hybrids since it had a statistically similar mean MOR and MOE to P. radiata. P. elliottii and the hybrid P. elliottii x caribaea had statistically significant lower MOR and MOE than P. radiata. , Thesis (MSc) -- Faculty of Science, School of Natural Resource Management, 2021
- Full Text: false
- Date Issued: 2021-04
- Authors: Ndovela, Lisakhanya Sizo
- Date: 2021-04
- Subjects: Gqeberha (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/52002 , vital:43435
- Description: According to the South African National Standards, only Pinus canariensis, Pinus pinaster and Pinus radiata are suitable to be used as structural softwood poles. Of the three Pinus species mentioned, only P. radiata is still planted in South Africa and its future and availability is uncertain. The lack of availability of structural pine poles necessitates the South African forestry industry to look at alternative softwood species to plant. The broad aim of this study was to determine whether there are alternative Pinus species or hybrids that can be planted in South Africa’s Western and Southern Cape areas that will have suitable properties to be used as a resource for structural poles. This document reports on the testing of the strength and stiffness, as well as other relevant properties, of poles from several Pinus species and Pinus hybrids. The poles were derived from thinned eight-year-old tree stands in Knysna, Western Cape. Poles were peeled, kiln dried and graded before bending tests were carried out. Species and hybrids were also assessed for differences within a tree along the length. Also, the correlation between modulus of rupture (MOR), modulus of elasticity (MOE) and wood grading properties was evaluated. The results showed that there was a highly significant effect of species and log position on the mean MOR of the poles. In general, poles from the bottom of the tree had a higher mean MOR than poles from the top of the tree. There was also a highly significant effect of species and pole position on the mean MOE of poles, with poles at the top of the trees generally having higher MOE values. A very concerning finding was that the 5th percentile MOR and mean MOE values of all the species were far lower than required by SANS 10163-1 (2003). Even for the best performing species, P. radiata, the MOR 5th percentile value was less than half the required value, while the mean MOE was also 39% lower than the required mean MOE. Apart from P. radiata, the P. maximinoi performed the best of all species and hybrids since it had a statistically similar mean MOR and MOE to P. radiata. P. elliottii and the hybrid P. elliottii x caribaea had statistically significant lower MOR and MOE than P. radiata. , Thesis (MSc) -- Faculty of Science, School of Natural Resource Management, 2021
- Full Text: false
- Date Issued: 2021-04
Synthesis and characterization of iron doped sodium and potassium titanates using the pechini sol-gel method
- Authors: Guga, Aluwani
- Date: 2021-12
- Subjects: Port Elizabeth (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/53646 , vital:45683
- Description: Iron doped (Fe: 5Ti) sodium and potassium titanates were prepared by the Pechini sol-gel method and calcined at 800 °C. X-ray diffraction (XRD), scanning electron microscopy (SEM), transmission electron microscopy (TEM), energy dispersive X-ray spectrometry (EDS), FTIR and Raman spectroscopy were used to characterize the structure and morphology of the titanate nanomaterials. A quantitative XRD analysis using Rietveld refinement of the titanates confirmed the powders to consist of crystalline phases with the Na2Ti7O15 and K2Ti8O17 phases predominant for the sodium and potassium titanate, respectively. This was further confirmed using selected area electron diffraction (SAED) in the TEM. SEM and TEM analyses indicated that the titanates are consistent with a nanostructured material exhibiting rod-like morphology. The elemental compositions of the titanites were examined by SEM-EDS and TEM-EDS and found to agree well with the targeted Fe to Ti ratio from synthesis. Limited evidence for the segregation of iron in the titanate regions were found indicating the iron to be incorporated within the titanate lattice. Electron energy loss spectroscopy (EELS) fine-structure analysis of the Fe L2,3 core-loss edge was successfully used to match the Fe to a 2+ or 3+ valence state, consistent with its occupation at Ti lattice sites. Finally, Fourier transform infrared spectroscopy (FTIR) and Raman spectroscopy were used to study the vibrational modes of the functional group of the sodium and potassium titanates. Vibrational modes consistent with previously reported findings for the titanate phases identified were found with no evidence of isolated Fe related modes. , Thesis (MSc) -- Faculty of Science, Computer Science, Mathematics, Physics and Statistics, 2021
- Full Text: false
- Date Issued: 2021-12
- Authors: Guga, Aluwani
- Date: 2021-12
- Subjects: Port Elizabeth (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/53646 , vital:45683
- Description: Iron doped (Fe: 5Ti) sodium and potassium titanates were prepared by the Pechini sol-gel method and calcined at 800 °C. X-ray diffraction (XRD), scanning electron microscopy (SEM), transmission electron microscopy (TEM), energy dispersive X-ray spectrometry (EDS), FTIR and Raman spectroscopy were used to characterize the structure and morphology of the titanate nanomaterials. A quantitative XRD analysis using Rietveld refinement of the titanates confirmed the powders to consist of crystalline phases with the Na2Ti7O15 and K2Ti8O17 phases predominant for the sodium and potassium titanate, respectively. This was further confirmed using selected area electron diffraction (SAED) in the TEM. SEM and TEM analyses indicated that the titanates are consistent with a nanostructured material exhibiting rod-like morphology. The elemental compositions of the titanites were examined by SEM-EDS and TEM-EDS and found to agree well with the targeted Fe to Ti ratio from synthesis. Limited evidence for the segregation of iron in the titanate regions were found indicating the iron to be incorporated within the titanate lattice. Electron energy loss spectroscopy (EELS) fine-structure analysis of the Fe L2,3 core-loss edge was successfully used to match the Fe to a 2+ or 3+ valence state, consistent with its occupation at Ti lattice sites. Finally, Fourier transform infrared spectroscopy (FTIR) and Raman spectroscopy were used to study the vibrational modes of the functional group of the sodium and potassium titanates. Vibrational modes consistent with previously reported findings for the titanate phases identified were found with no evidence of isolated Fe related modes. , Thesis (MSc) -- Faculty of Science, Computer Science, Mathematics, Physics and Statistics, 2021
- Full Text: false
- Date Issued: 2021-12
Studies on seed germination and response to fertilization of Amaranthus accessions collected in the Eastern Cape Province, South Africa
- Ramangoele, Mpaballeng Alinah
- Authors: Ramangoele, Mpaballeng Alinah
- Date: 2021-12
- Subjects: Port Elizabeth (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/54112 , vital:46307
- Description: Studies were conducted at Döhne Agricultural Development Institute (D.A.D.I.), geographically located between latitude 32°31'34.077"S and longitude 27°27'37.473"E in Stutterheim, Eastern Cape Province from summer 2018 until autumn 2019.The objectives were to determine seed germination and seedling vigour of four local Amaranthus accessions and to evaluate the effect of organic and inorganic fertilization on the growth, yield and nutrient composition. In the germination studies, herein referred to as Experiment 1,laboratory assessments were laid out in a Complete Randomized Design (CRD) replicated four times to test seed germination, seedling emergence and seedling vigour of four Amaranthus accessions namely: A. Hypochondriacus, A. Retroflexus 1, A. Hybridus and A. Retroflexus 2. Data collection included germination percentage, radicle length, co-efficient of velocity of germination and seedling vigour. A.Retroflexus2 gave the highest germination percentage in summer (85%) and autumn (87.75%).Seed weight resulted in the highest germination percentage and was observed to have shown a high positive correlation of {R2=0.91} in summer and{R2=0.92} in autumn respectively. The highest seedling vigour (p<0.001) in summer was attained from A. Hypochondriacus and A. Retroflexus2.In the greenhouse in summer, the highest emergence percentage was observed from A. Hypochondriacus(93.00%), whilst in autumn it was A.Retroflexus2 (88.38%).A. Retroflexus1 was the least performer in both seasons. In summer, A. Hypochondriacus and A. Retroflexus2 resulted in very high seedling vigour. In autumn A. Hypochondriacus, A. Retroflexus2 and A. Hybridus resulted in high seedling vigour and A. Retroflexus1 in moderate seedling vigour. The relationship observed between seed weight and seedling vigour showed a negative (inverse)correlation in summer {R2=0.58} and autumn {R2=0.62}.In Experiment 2, seedlings of A. Hypochondriacus and A. Retroflexus 2were transplanted in 5litrebasal perforated plastic pots which were filled with soil. The experimental layout was a CRD replicated four times. The treatments were: control (no amendment), goat manure, cattle manure and NPK fertilizer. Growth performance data were collected for plant height, the number of leaves and stem girth. In summer, when goat manure was applied both accessions resulted in the tallest plants (78.80cm) yet A. Retroflexus 2 and vA. Hypochondriacus gave the greatest stem girthand highest number of leaves respectively. In autumn, the tallest plants and highest number of leaves were observed from A. Retroflexus 2fertilized with NPK and the greatest stem girth was observed from A. Hypochondriacus fertilized with goat manure. The interaction of fertilization and accessions resulted in A. Retroflexus 2 fertilized with goat manure generating the greatest fresh shoot biomass (137.27g plant-1) and the least from the control. Both accessions fertilized with goat manure attained the greatest dry leaf biomass. Insummer, A.Retroflexus2 outperformed A. Hypochondriacus in calcium content despite the treatments. Unfertilized A. Retroflexus2 produced leaves with high potassium. Both unfertilized accessions showed the highest magnesium content. All A. Retroflexus2 treatments outperformed A. Hypochondriacus treatments on iron content except the control. The summer season was the best in terms of growth and yield of the tested accessions. , Thesis (MSc) -- Faculty of Science, School of Natural Resource Management, 2021
- Full Text:
- Date Issued: 2021-12
- Authors: Ramangoele, Mpaballeng Alinah
- Date: 2021-12
- Subjects: Port Elizabeth (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/54112 , vital:46307
- Description: Studies were conducted at Döhne Agricultural Development Institute (D.A.D.I.), geographically located between latitude 32°31'34.077"S and longitude 27°27'37.473"E in Stutterheim, Eastern Cape Province from summer 2018 until autumn 2019.The objectives were to determine seed germination and seedling vigour of four local Amaranthus accessions and to evaluate the effect of organic and inorganic fertilization on the growth, yield and nutrient composition. In the germination studies, herein referred to as Experiment 1,laboratory assessments were laid out in a Complete Randomized Design (CRD) replicated four times to test seed germination, seedling emergence and seedling vigour of four Amaranthus accessions namely: A. Hypochondriacus, A. Retroflexus 1, A. Hybridus and A. Retroflexus 2. Data collection included germination percentage, radicle length, co-efficient of velocity of germination and seedling vigour. A.Retroflexus2 gave the highest germination percentage in summer (85%) and autumn (87.75%).Seed weight resulted in the highest germination percentage and was observed to have shown a high positive correlation of {R2=0.91} in summer and{R2=0.92} in autumn respectively. The highest seedling vigour (p<0.001) in summer was attained from A. Hypochondriacus and A. Retroflexus2.In the greenhouse in summer, the highest emergence percentage was observed from A. Hypochondriacus(93.00%), whilst in autumn it was A.Retroflexus2 (88.38%).A. Retroflexus1 was the least performer in both seasons. In summer, A. Hypochondriacus and A. Retroflexus2 resulted in very high seedling vigour. In autumn A. Hypochondriacus, A. Retroflexus2 and A. Hybridus resulted in high seedling vigour and A. Retroflexus1 in moderate seedling vigour. The relationship observed between seed weight and seedling vigour showed a negative (inverse)correlation in summer {R2=0.58} and autumn {R2=0.62}.In Experiment 2, seedlings of A. Hypochondriacus and A. Retroflexus 2were transplanted in 5litrebasal perforated plastic pots which were filled with soil. The experimental layout was a CRD replicated four times. The treatments were: control (no amendment), goat manure, cattle manure and NPK fertilizer. Growth performance data were collected for plant height, the number of leaves and stem girth. In summer, when goat manure was applied both accessions resulted in the tallest plants (78.80cm) yet A. Retroflexus 2 and vA. Hypochondriacus gave the greatest stem girthand highest number of leaves respectively. In autumn, the tallest plants and highest number of leaves were observed from A. Retroflexus 2fertilized with NPK and the greatest stem girth was observed from A. Hypochondriacus fertilized with goat manure. The interaction of fertilization and accessions resulted in A. Retroflexus 2 fertilized with goat manure generating the greatest fresh shoot biomass (137.27g plant-1) and the least from the control. Both accessions fertilized with goat manure attained the greatest dry leaf biomass. Insummer, A.Retroflexus2 outperformed A. Hypochondriacus in calcium content despite the treatments. Unfertilized A. Retroflexus2 produced leaves with high potassium. Both unfertilized accessions showed the highest magnesium content. All A. Retroflexus2 treatments outperformed A. Hypochondriacus treatments on iron content except the control. The summer season was the best in terms of growth and yield of the tested accessions. , Thesis (MSc) -- Faculty of Science, School of Natural Resource Management, 2021
- Full Text:
- Date Issued: 2021-12
Spatial modelling of accessibility to tuberculosis treatment: the case of Ngaka Modiri Molema District
- Authors: Ramotsongwa, Karabo Naome
- Date: 2022-04
- Subjects: Port Elizabeth (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/55435 , vital:52000
- Description: Accessibility to healthcare refers to the availability, or the provision of healthcare-byhealthcare professionals and stakeholders and individuals' ability to obtain care and treatment. It affects overall physical, social, and mental health; disease and disability prevention; detection and treatment of health conditions; standard of living; preventable death; and life expectancy, and it is crucial to the performance of health care systems around the world. If healthcare services are available and are in sufficient supply, people will be able to seek health care, and a population will have access to services. The leading cause of death globally is Tuberculosis (TB) and South Africa is amongst the top 5 countries most affected by TB. This is aggravated by high HIV/AIDS statistics. Children belowthe age of 4, between the ages of 4- 15, and women and men of working ages are highly affected by TB and it is the primary cause of death in these groups in the Ngaka Modiri Molema District. This study used study tools like Spatial Modelling, Geographic Information Systems and software like ArcGIS 10.5, TerrSet IDRISI 18.30, and secondary data from the North West Departmentof Health (Tier.net &DHIS) and also TB patients’ home addresses to investigate the accessibility of TB treatment in Ngaka Modiri Molema, in order to spatially visualize the distribution of a communicable disease like TB and public healthcare facilities in the Ngaka Modiri Molema (NMM) District and suggest optimum sites for hospital facilities. , Thesis (MSc) -- Faculty of Science, School of Environmental Sciences, 2022
- Full Text:
- Date Issued: 2022-04
- Authors: Ramotsongwa, Karabo Naome
- Date: 2022-04
- Subjects: Port Elizabeth (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/55435 , vital:52000
- Description: Accessibility to healthcare refers to the availability, or the provision of healthcare-byhealthcare professionals and stakeholders and individuals' ability to obtain care and treatment. It affects overall physical, social, and mental health; disease and disability prevention; detection and treatment of health conditions; standard of living; preventable death; and life expectancy, and it is crucial to the performance of health care systems around the world. If healthcare services are available and are in sufficient supply, people will be able to seek health care, and a population will have access to services. The leading cause of death globally is Tuberculosis (TB) and South Africa is amongst the top 5 countries most affected by TB. This is aggravated by high HIV/AIDS statistics. Children belowthe age of 4, between the ages of 4- 15, and women and men of working ages are highly affected by TB and it is the primary cause of death in these groups in the Ngaka Modiri Molema District. This study used study tools like Spatial Modelling, Geographic Information Systems and software like ArcGIS 10.5, TerrSet IDRISI 18.30, and secondary data from the North West Departmentof Health (Tier.net &DHIS) and also TB patients’ home addresses to investigate the accessibility of TB treatment in Ngaka Modiri Molema, in order to spatially visualize the distribution of a communicable disease like TB and public healthcare facilities in the Ngaka Modiri Molema (NMM) District and suggest optimum sites for hospital facilities. , Thesis (MSc) -- Faculty of Science, School of Environmental Sciences, 2022
- Full Text:
- Date Issued: 2022-04
Spatial fisheries management options for inclusion in marine spatial planning in South Africa
- Authors: Reed, Jodie Romay
- Date: 2021-04
- Subjects: Gqeberha (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Doctoral theses , text
- Identifier: http://hdl.handle.net/10948/52068 , vital:43451
- Description: Integration of sectoral based management into a coherent and coordinated spatial management framework is one of the central challenges of marine spatial planning ȋMSPȌǤ MSP initiatives aim to provide operational frameworks to promote sustainable use of the economic potential of the ocean while maintaining the value of marine biodiversity and the integrity of marine ecosystems to provide servicesǤ The ecosystem services associated with fisheries in terms of food and job provision are some of the most well recognised and highly valued in the marine realm and maintaining these benefits depends on a holistic understanding of the ecosystemǡ human uses and the management thereofǡ including areaǦbased managementǤ In ͲͰͱǡ South Africa was the first African country to enact MSP legislationǤ The development of MSP was advanced through a Presidential ocean economy initiative ȋOperation Phakisaǣ Oceans EconomyȌ that aimed to fast track marine transport and manufacturingǡ aquacultureǡ and the development of oil and gasǡ small harbourǡ and coastal and marine tourismǤ A dedicated ocean governance component was included to develop an overarchingǡ integrated ocean governance frameworkǤ The absence of fisheries in the plans and initiatives was conspicuousǤ The implementation of MSPǡ howeverǡ provides an opportunity to safeguard the ecosystem services provided by fisheries but only if the interests of fisheries can be adequately reflected in spatial plans and analysesǤ Furthermoreǡ the implementation of MSP may provide new opportunities for innovation in spatial approaches to local fisheries management that could address numerous spatial conflicts that have been reportedǤ Integration of spatial fisheries management approaches into MSP can also support the implementation of ecosystemǦbased management ȋEBMȌǡ by including mechanisms such as habitat protectionǡ effective management of areas important for vulnerable life history stagesǡ and bycatch managementǤ This study aimed to identifyǡ assess and further develop spatial management options for fisheries to facilitate the integration of fisheries management and MSPǤ This was achieved by firstlyǡ identifying existing spatial management instruments and assessing the way in which these instruments may be implemented to support spatial fisheries managementǤ Secondlyǡ the application of two contrasting spatial management optionsǡ applied to two pelagic fisheriesǡ was examined to assess their effectiveness at achieving fisheries management objectives with a focus on bycatch reductionǡ while minimising the costs to the fisheries. , Thesis (PhD) -- Faculty of Science, Ocean Sciences, 2021
- Full Text: false
- Date Issued: 2021-04
- Authors: Reed, Jodie Romay
- Date: 2021-04
- Subjects: Gqeberha (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Doctoral theses , text
- Identifier: http://hdl.handle.net/10948/52068 , vital:43451
- Description: Integration of sectoral based management into a coherent and coordinated spatial management framework is one of the central challenges of marine spatial planning ȋMSPȌǤ MSP initiatives aim to provide operational frameworks to promote sustainable use of the economic potential of the ocean while maintaining the value of marine biodiversity and the integrity of marine ecosystems to provide servicesǤ The ecosystem services associated with fisheries in terms of food and job provision are some of the most well recognised and highly valued in the marine realm and maintaining these benefits depends on a holistic understanding of the ecosystemǡ human uses and the management thereofǡ including areaǦbased managementǤ In ͲͰͱǡ South Africa was the first African country to enact MSP legislationǤ The development of MSP was advanced through a Presidential ocean economy initiative ȋOperation Phakisaǣ Oceans EconomyȌ that aimed to fast track marine transport and manufacturingǡ aquacultureǡ and the development of oil and gasǡ small harbourǡ and coastal and marine tourismǤ A dedicated ocean governance component was included to develop an overarchingǡ integrated ocean governance frameworkǤ The absence of fisheries in the plans and initiatives was conspicuousǤ The implementation of MSPǡ howeverǡ provides an opportunity to safeguard the ecosystem services provided by fisheries but only if the interests of fisheries can be adequately reflected in spatial plans and analysesǤ Furthermoreǡ the implementation of MSP may provide new opportunities for innovation in spatial approaches to local fisheries management that could address numerous spatial conflicts that have been reportedǤ Integration of spatial fisheries management approaches into MSP can also support the implementation of ecosystemǦbased management ȋEBMȌǡ by including mechanisms such as habitat protectionǡ effective management of areas important for vulnerable life history stagesǡ and bycatch managementǤ This study aimed to identifyǡ assess and further develop spatial management options for fisheries to facilitate the integration of fisheries management and MSPǤ This was achieved by firstlyǡ identifying existing spatial management instruments and assessing the way in which these instruments may be implemented to support spatial fisheries managementǤ Secondlyǡ the application of two contrasting spatial management optionsǡ applied to two pelagic fisheriesǡ was examined to assess their effectiveness at achieving fisheries management objectives with a focus on bycatch reductionǡ while minimising the costs to the fisheries. , Thesis (PhD) -- Faculty of Science, Ocean Sciences, 2021
- Full Text: false
- Date Issued: 2021-04
Spatial and temporal analysis of the critical zone in the Western rift valley corridor: towards earth stewardship science in East Africa
- Authors: Miller, Warren David
- Date: 2022-12
- Subjects: Port Elizabeth (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Doctoral theses , text
- Identifier: http://hdl.handle.net/10948/59771 , vital:62423
- Description: Over the coming decades, Africa is expected to experience disturbing effects due to climate change and increased land cover change due to human influences presenting a significant concern for the future well-being of human and biological systems, the latter being the foundation of ecosystem services supplied to humanity. Therefore, unprecedented transdisciplinary cooperation, coordination, and integration amongst researchers, government, and civil society are necessary to increase the resiliency of these systems. This study aims to provide an outline of the Africa Alive Corridors (AAC) as an essential model for the encouragement of sustainable development through Earth Stewardship science. These aims are accompanied by the quantification and forward modelling for land cover change of the Critical Zone over 10 Great Lake Basins across one of the AAC, the Western Rift Valley Corridor (WRVC), in East Africa between the years 2018 and 2060. This approach provides the foundation for implementing improved regional governance, better encouragement of sustainable development beyond the 2030 United Nations Sustainable Development Goals, and education programs, such as the AAC, that promote socio-ecological resilience through Earth Stewardship Science. The AAC archives a portion of East Africa as the WRVC, a corridor along the western branch of the East African Rift System that highlights twenty heritage nodes, primarily great lakes, mountain ranges, national parks, and biological hotspots. These heritage entities are associated with ca. 12-million-years of evolution and transformation of the East African topography and related African Great Lake (AGL) systems. The thesis defines the study area by delineating AGL basins intersected by the WRVC. Across these basins, land cover change analysis provides a platform for an integrated assessment of the projected health of the corridor region. Existing land cover datasets provide the initial conditions of the study area for 2008 and 2013. Land cover between 2008 and 2013 is cross-tabulated using the Land Cover Module in the Terrset software, followed by the iii delineation of sub-models and driver variable identification. The Multi-Layer Perceptron algorithm provides the transition potentials between tree cover, urban area, cropland, wetland, and open area classes. Change quantification and prediction using Markov Chain analysis are then established for 2018, 2030, and 2060. The model successfully simulated future land cover change and concluded that: (1) proximity to existing human activity, proximity to existing tree cover, and population are the primary drivers of change; (2) the dominant land cover of the ten lake basins for 2018 was cropland at ca. 48%, followed by tree cover at ca. 33%; (3) total anthropogenic change over the coming four decades equates to over ca. 52 000 km2 (5 200 000 ha), and particularly (4) an urban area is expected to increase by >130%. This assessment ultimately provides a platform for regional governance development at the basin scale and Earth Stewardship science in East Africa. These changes require transdisciplinary action from researchers to civil society. The AAC provides the foundation for understanding the dynamics of the systems that support life across broader spatial and temporal resolutions in Africa, highlighting the need for future generations to build socio-ecological resilience to anticipate challenges such as biodiversity loss posed by climate change and excessive land cover change. , Thesis (DSc) -- Faculty of Science, School of Environmental Sciences, 2022
- Full Text:
- Date Issued: 2022-12
- Authors: Miller, Warren David
- Date: 2022-12
- Subjects: Port Elizabeth (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Doctoral theses , text
- Identifier: http://hdl.handle.net/10948/59771 , vital:62423
- Description: Over the coming decades, Africa is expected to experience disturbing effects due to climate change and increased land cover change due to human influences presenting a significant concern for the future well-being of human and biological systems, the latter being the foundation of ecosystem services supplied to humanity. Therefore, unprecedented transdisciplinary cooperation, coordination, and integration amongst researchers, government, and civil society are necessary to increase the resiliency of these systems. This study aims to provide an outline of the Africa Alive Corridors (AAC) as an essential model for the encouragement of sustainable development through Earth Stewardship science. These aims are accompanied by the quantification and forward modelling for land cover change of the Critical Zone over 10 Great Lake Basins across one of the AAC, the Western Rift Valley Corridor (WRVC), in East Africa between the years 2018 and 2060. This approach provides the foundation for implementing improved regional governance, better encouragement of sustainable development beyond the 2030 United Nations Sustainable Development Goals, and education programs, such as the AAC, that promote socio-ecological resilience through Earth Stewardship Science. The AAC archives a portion of East Africa as the WRVC, a corridor along the western branch of the East African Rift System that highlights twenty heritage nodes, primarily great lakes, mountain ranges, national parks, and biological hotspots. These heritage entities are associated with ca. 12-million-years of evolution and transformation of the East African topography and related African Great Lake (AGL) systems. The thesis defines the study area by delineating AGL basins intersected by the WRVC. Across these basins, land cover change analysis provides a platform for an integrated assessment of the projected health of the corridor region. Existing land cover datasets provide the initial conditions of the study area for 2008 and 2013. Land cover between 2008 and 2013 is cross-tabulated using the Land Cover Module in the Terrset software, followed by the iii delineation of sub-models and driver variable identification. The Multi-Layer Perceptron algorithm provides the transition potentials between tree cover, urban area, cropland, wetland, and open area classes. Change quantification and prediction using Markov Chain analysis are then established for 2018, 2030, and 2060. The model successfully simulated future land cover change and concluded that: (1) proximity to existing human activity, proximity to existing tree cover, and population are the primary drivers of change; (2) the dominant land cover of the ten lake basins for 2018 was cropland at ca. 48%, followed by tree cover at ca. 33%; (3) total anthropogenic change over the coming four decades equates to over ca. 52 000 km2 (5 200 000 ha), and particularly (4) an urban area is expected to increase by >130%. This assessment ultimately provides a platform for regional governance development at the basin scale and Earth Stewardship science in East Africa. These changes require transdisciplinary action from researchers to civil society. The AAC provides the foundation for understanding the dynamics of the systems that support life across broader spatial and temporal resolutions in Africa, highlighting the need for future generations to build socio-ecological resilience to anticipate challenges such as biodiversity loss posed by climate change and excessive land cover change. , Thesis (DSc) -- Faculty of Science, School of Environmental Sciences, 2022
- Full Text:
- Date Issued: 2022-12
Rheology behaviour of slurries as a function of particle size and ion concentration
- Authors: Kondlo, Princess Kholiwe
- Date: 2021-04
- Subjects: Port Elizabeth (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/53333 , vital:45141
- Description: In this work, the rheological properties of alumina slurries milled to different particle sizes were investigated. Viscosity increases as the particle size decreases. When increasing amounts of calcium hydroxide, strontium hydroxide or barium hydroxide are added, the viscosity first goes down and then goes up. This can be explained in terms of changes in pH and changes in ionic strength impacting on the surface potential of the particles in suspension. Adding the same concentration of different cations results in different viscosities, with the order being (from high to low viscosity) Ba>Sr>Ca. Effects of partial dissolution of and structural changes to the alumina particles at high pH cannot be excluded. In order to better understanding the different effects, it was attempted to measure the zeta potential of the slurries at different pH values. This resulted in highly positive zeta potential values over the complete pH range, without the observationof an iso-electric point. This does not fit to the observed changes in rheology and contrasts withliterature data. One explanation would be that the measurement system used is unsuitable to yield correct zeta potential values for the materials under investigation. , Thesis (MSc) -- Faculty of Science, Department of Chemistry, 2021
- Full Text:
- Date Issued: 2021-04
- Authors: Kondlo, Princess Kholiwe
- Date: 2021-04
- Subjects: Port Elizabeth (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/53333 , vital:45141
- Description: In this work, the rheological properties of alumina slurries milled to different particle sizes were investigated. Viscosity increases as the particle size decreases. When increasing amounts of calcium hydroxide, strontium hydroxide or barium hydroxide are added, the viscosity first goes down and then goes up. This can be explained in terms of changes in pH and changes in ionic strength impacting on the surface potential of the particles in suspension. Adding the same concentration of different cations results in different viscosities, with the order being (from high to low viscosity) Ba>Sr>Ca. Effects of partial dissolution of and structural changes to the alumina particles at high pH cannot be excluded. In order to better understanding the different effects, it was attempted to measure the zeta potential of the slurries at different pH values. This resulted in highly positive zeta potential values over the complete pH range, without the observationof an iso-electric point. This does not fit to the observed changes in rheology and contrasts withliterature data. One explanation would be that the measurement system used is unsuitable to yield correct zeta potential values for the materials under investigation. , Thesis (MSc) -- Faculty of Science, Department of Chemistry, 2021
- Full Text:
- Date Issued: 2021-04
Recreating a wetland at an abandoned saltworks : towards a rehabilitation plan
- Authors: Wasserman, Johan
- Date: 2021-04
- Subjects: Gqeberha (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/52146 , vital:43450
- Description: A saltworks at Swartkops Estuary was abandoned in 2018. While operational, the saltworks hosted some of the largest breeding colonies of several shorebird species in southern Africa and hosted thousands of Palearctic migrant waterbirds annually. The abandonment of the saltworks has resulted in the loss of the artificially managed hydrological regime and therefore the wetland function and habitat value of the site, and the rich and diverse avifauna that once occurred at the site have not returned. The rehabilitation of the saltworks as a wetland that functions as a waterbird sanctuary is currently being organised, and this research aimed to create a plan for implementing and monitoring the rehabilitation. In order to do so, the baseline environmental condition of the abandoned saltworks was established, the possible rehabilitation interventions necessary for rehabilitating the site were assessed, and the potential ecological implications of any interventions were investigated. The assessment of the saltworks’ baseline condition revealed that the site is now characterised by vast expanses of dry hypersaline sediment with sparse patches of monospecific vegetation and depauperate avifauna. The once rich and diverse waterbird communities have all but disappeared since the site was abandoned and are unlikely to return unless a managed hydrological regime is reinstated. Furthermore, it is improbable that salt marsh vegetation will cover the abandoned saltworks primarily due to the high sediment salinity that will persist unless the saltpans are flooded. The area will likely remain barren with little ecological value if no rehabilitation action is taken. Two potential rehabilitation options for reinstating a hydrological regime at the saltworks were identified: (1) pumping estuary water into all of the saltpans; or (2) pumping estuary water into some of the saltpans, while allowing the largest one to be filled with stormwater. Both options were deemed to be feasible; however, the second option will likely have lower running costs. The use of stormwater to fill the one saltpan is expected to result in brackish conditions initially, while the saltpans filled with estuary water would have salinity levels ranging from euhaline to slightly hypersaline. Both the stormwater and estuary water are rich in inorganic nutrients – the estuary water is rich in both dissolved inorganic nitrogen (DIN) and dissolved inorganic phosphorus (DIP), while the stormwater has an exceptionally high DIN content. This raised concerns of creating eutrophic wetlands with detrimental conditions such as algal blooms and a hypoxic water column. , Thesis (MSc) -- Faculty of Science, School of Environmental Sciences, 2021
- Full Text: false
- Date Issued: 2021-04
- Authors: Wasserman, Johan
- Date: 2021-04
- Subjects: Gqeberha (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/52146 , vital:43450
- Description: A saltworks at Swartkops Estuary was abandoned in 2018. While operational, the saltworks hosted some of the largest breeding colonies of several shorebird species in southern Africa and hosted thousands of Palearctic migrant waterbirds annually. The abandonment of the saltworks has resulted in the loss of the artificially managed hydrological regime and therefore the wetland function and habitat value of the site, and the rich and diverse avifauna that once occurred at the site have not returned. The rehabilitation of the saltworks as a wetland that functions as a waterbird sanctuary is currently being organised, and this research aimed to create a plan for implementing and monitoring the rehabilitation. In order to do so, the baseline environmental condition of the abandoned saltworks was established, the possible rehabilitation interventions necessary for rehabilitating the site were assessed, and the potential ecological implications of any interventions were investigated. The assessment of the saltworks’ baseline condition revealed that the site is now characterised by vast expanses of dry hypersaline sediment with sparse patches of monospecific vegetation and depauperate avifauna. The once rich and diverse waterbird communities have all but disappeared since the site was abandoned and are unlikely to return unless a managed hydrological regime is reinstated. Furthermore, it is improbable that salt marsh vegetation will cover the abandoned saltworks primarily due to the high sediment salinity that will persist unless the saltpans are flooded. The area will likely remain barren with little ecological value if no rehabilitation action is taken. Two potential rehabilitation options for reinstating a hydrological regime at the saltworks were identified: (1) pumping estuary water into all of the saltpans; or (2) pumping estuary water into some of the saltpans, while allowing the largest one to be filled with stormwater. Both options were deemed to be feasible; however, the second option will likely have lower running costs. The use of stormwater to fill the one saltpan is expected to result in brackish conditions initially, while the saltpans filled with estuary water would have salinity levels ranging from euhaline to slightly hypersaline. Both the stormwater and estuary water are rich in inorganic nutrients – the estuary water is rich in both dissolved inorganic nitrogen (DIN) and dissolved inorganic phosphorus (DIP), while the stormwater has an exceptionally high DIN content. This raised concerns of creating eutrophic wetlands with detrimental conditions such as algal blooms and a hypoxic water column. , Thesis (MSc) -- Faculty of Science, School of Environmental Sciences, 2021
- Full Text: false
- Date Issued: 2021-04
Real-time feedback model for supporting individualised learning of programming students
- Authors: Keen, Charne
- Date: 2021-12
- Subjects: Port Elizabeth (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/53624 , vital:45691
- Description: Feedback is crucial to the enhancement of the learning and teaching environment, especially in those environments that suffer from a number of extrinsic challenges. The growing demands for educators to provide academic interventions throughout the lecture session and the need for continuous improvement of the quality of university education make it necessary to find and apply more effective and efficient educational technologies and practices based on the correlation of teaching with a student’s conceptual understanding and individual learning preference. Following a combination of Design Science Research (DSR) and Case Study Methodology, this research addresses this problem by designing a technology based real-time feedback (TBRTF) model that can easily be implemented in a South African University. The model designed followed a layered architecture pattern. The architecture describes the data, technology and user support layers of the model. The data support layer incorporates the collection of student academic data and learning preferences. The technology incorporates a machine learning component. The machine learning component covers two technological aspects: the prediction component and the clustering component. This TBRTF model provides the guidelines needed to develop a system that supports individualised real-time feedback in the learning and teaching environment of programming students. The aim of the model is that as the students partake in learning activities where the student data is updated, the monitoring component will fire, updating the probability of failure prediction and in turn the student clusters are regenerated. This will notify the educator of a change and provide decision making support. The student will be allocated individualised feedback in the form of learning materials based on the cluster that the student is allocated to. Through a demonstration and evaluation, this study showed that by following the proposed architecture of the TBRTF model, a model that supports individualised realtime feedback in the learning and teaching environment of programming students can be developed. The validation used an artificial neural network as the prediction component and a k-means clustering algorithm as the clustering component. , Thesis (MSc) -- Faculty of Science, School of Computer Science, Mathematics, Physics and Statistics, 2021
- Full Text: false
- Date Issued: 2021-12
- Authors: Keen, Charne
- Date: 2021-12
- Subjects: Port Elizabeth (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/53624 , vital:45691
- Description: Feedback is crucial to the enhancement of the learning and teaching environment, especially in those environments that suffer from a number of extrinsic challenges. The growing demands for educators to provide academic interventions throughout the lecture session and the need for continuous improvement of the quality of university education make it necessary to find and apply more effective and efficient educational technologies and practices based on the correlation of teaching with a student’s conceptual understanding and individual learning preference. Following a combination of Design Science Research (DSR) and Case Study Methodology, this research addresses this problem by designing a technology based real-time feedback (TBRTF) model that can easily be implemented in a South African University. The model designed followed a layered architecture pattern. The architecture describes the data, technology and user support layers of the model. The data support layer incorporates the collection of student academic data and learning preferences. The technology incorporates a machine learning component. The machine learning component covers two technological aspects: the prediction component and the clustering component. This TBRTF model provides the guidelines needed to develop a system that supports individualised real-time feedback in the learning and teaching environment of programming students. The aim of the model is that as the students partake in learning activities where the student data is updated, the monitoring component will fire, updating the probability of failure prediction and in turn the student clusters are regenerated. This will notify the educator of a change and provide decision making support. The student will be allocated individualised feedback in the form of learning materials based on the cluster that the student is allocated to. Through a demonstration and evaluation, this study showed that by following the proposed architecture of the TBRTF model, a model that supports individualised realtime feedback in the learning and teaching environment of programming students can be developed. The validation used an artificial neural network as the prediction component and a k-means clustering algorithm as the clustering component. , Thesis (MSc) -- Faculty of Science, School of Computer Science, Mathematics, Physics and Statistics, 2021
- Full Text: false
- Date Issued: 2021-12
Quantifying variability of emissions of greenhouse gas (CO2& CH4) across selected soils and agricultural practices
- Authors: Sebake, Tebogo Matsimela
- Date: 2021-12
- Subjects: Port Elizabeth (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/54107 , vital:46302
- Description: Increasing concentrations of greenhouse gases (GHG’s)in the atmosphere are warming the planet, and agriculture is responsible for about 30% of these emissions. Soils act as a host for greenhouse gases, since both their storage and emission capacities are large, accounting for two-times the amount of carbon in the atmosphere and in plant and animal life. It sequesters large amounts of carbon, and because agricultural practices depend on soil for production, the practices influence the soil’s ability to store the carbon effectively. Production soils emit greenhouse gas, predominantly carbon dioxide and methane, which are assessed for emissions in this study. Climate change creates unpredictability in precipitation and temperature; farmers need to be flexible and adapt production methods to such environmental changes in order to continue producing sustainably. Global food production needs to grow drastically to meet the projected demands for rising population and diet shifts; studies have shown that feeding a more populated and a more affluent, equal, world will require roughly a doubling of agricultural production by 2050, which means more GHG emissions from the soil. To enable better control on these emissions, their links to agricultural practices need to be better quantified. The study was done in two areas: (1) long-term comparative farming systems research trial with controlled vegetable plots, in the agricultural school of Nelson Mandela University, in George, Western Cape province and (2) long-term wheat research trial of the Free State University, in Bethlehem, Free State province. The objective in study area one is to assess and compare GHG emissions from conventional and organic systems. Temperature and soil moisture were measured during gas samples to establish the influence they have on gas emissions. The objective in study area two is to assess and compare GHG emissions from no-till, plough, and stubble mulch. Stubble mulch refers to crop residue left in place on the land as a surface cover during fallow periods. Two polypropylene canisters are placed in a sampled plot to trap gas emitted from the soil. Analyses of the trapped gases in the headspace gives concentrations of CO2and CH4that was emitted during the duration the canister was closed. The gas is analysed by a G2201-i Picarro gas analyser, presently the only such instrument in South Africa. The analyser’s near-infrared Cavity Ring Down Spectroscopy technology is capable of simultaneous measurements of CO2and CH4down to parts per million. In study area one, conventional plots (R2T6 & R1T6) emitted 65.089ppm CO2and 61.159ppm CO2, and 0.0010ppm CH4and 0.0004ppm CH4, respectively. Organic plots (R1T3 & R2T3) emitted 53.264ppm CO2and 47.885ppm CO2, and 0.0023ppm CH4and 0.0019ppm CH4respectively. Thus, conventional plots emitted 19.98% & 30.98% more CO2than organic plots; but organic plots emitted 81.97% & 155.5% more CH4thanconventional plots. In study area two, ploughed soils emitted 38.727ppm CO2and 0.015ppm CH4, no-tilled soils emitted 31.798ppm CO2 and 0.011ppm CH4andstubble mulched soils emitted 28.373ppm CO2 and 0.009ppm CH4. Thus, ploughed soils emitted 19.65%more CO2than no-tilled soils, no-tilled soils emitted 11.38% more CO2 than stubble mulched soils and ploughed soils emitted 30.36% more CO2 than stubble mulched soils. Ploughed soils emitted 30.77% more CH4 than no-tilled soils, no-tilled soils emitted 20% more CH4 than stubble mulched soils and ploughed soils emitted 50% more CH4than stubble mulched soils. Moist soils result in decreased CO2emissions in conventional plots and increased CH4emissions in organic plots. Increasing temperature patterns are followed by a trend of increasing gas emissions. Reducing GHG emissions from agriculture and developing sustainable tillage practices can help mitigate climate change and increases the chances of stabilizing GHG concentrations and temperature control within a required range. , Thesis (MSc) -- Faculty of Science, School of Environmental Sciences, 2021
- Full Text:
- Date Issued: 2021-12
- Authors: Sebake, Tebogo Matsimela
- Date: 2021-12
- Subjects: Port Elizabeth (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/54107 , vital:46302
- Description: Increasing concentrations of greenhouse gases (GHG’s)in the atmosphere are warming the planet, and agriculture is responsible for about 30% of these emissions. Soils act as a host for greenhouse gases, since both their storage and emission capacities are large, accounting for two-times the amount of carbon in the atmosphere and in plant and animal life. It sequesters large amounts of carbon, and because agricultural practices depend on soil for production, the practices influence the soil’s ability to store the carbon effectively. Production soils emit greenhouse gas, predominantly carbon dioxide and methane, which are assessed for emissions in this study. Climate change creates unpredictability in precipitation and temperature; farmers need to be flexible and adapt production methods to such environmental changes in order to continue producing sustainably. Global food production needs to grow drastically to meet the projected demands for rising population and diet shifts; studies have shown that feeding a more populated and a more affluent, equal, world will require roughly a doubling of agricultural production by 2050, which means more GHG emissions from the soil. To enable better control on these emissions, their links to agricultural practices need to be better quantified. The study was done in two areas: (1) long-term comparative farming systems research trial with controlled vegetable plots, in the agricultural school of Nelson Mandela University, in George, Western Cape province and (2) long-term wheat research trial of the Free State University, in Bethlehem, Free State province. The objective in study area one is to assess and compare GHG emissions from conventional and organic systems. Temperature and soil moisture were measured during gas samples to establish the influence they have on gas emissions. The objective in study area two is to assess and compare GHG emissions from no-till, plough, and stubble mulch. Stubble mulch refers to crop residue left in place on the land as a surface cover during fallow periods. Two polypropylene canisters are placed in a sampled plot to trap gas emitted from the soil. Analyses of the trapped gases in the headspace gives concentrations of CO2and CH4that was emitted during the duration the canister was closed. The gas is analysed by a G2201-i Picarro gas analyser, presently the only such instrument in South Africa. The analyser’s near-infrared Cavity Ring Down Spectroscopy technology is capable of simultaneous measurements of CO2and CH4down to parts per million. In study area one, conventional plots (R2T6 & R1T6) emitted 65.089ppm CO2and 61.159ppm CO2, and 0.0010ppm CH4and 0.0004ppm CH4, respectively. Organic plots (R1T3 & R2T3) emitted 53.264ppm CO2and 47.885ppm CO2, and 0.0023ppm CH4and 0.0019ppm CH4respectively. Thus, conventional plots emitted 19.98% & 30.98% more CO2than organic plots; but organic plots emitted 81.97% & 155.5% more CH4thanconventional plots. In study area two, ploughed soils emitted 38.727ppm CO2and 0.015ppm CH4, no-tilled soils emitted 31.798ppm CO2 and 0.011ppm CH4andstubble mulched soils emitted 28.373ppm CO2 and 0.009ppm CH4. Thus, ploughed soils emitted 19.65%more CO2than no-tilled soils, no-tilled soils emitted 11.38% more CO2 than stubble mulched soils and ploughed soils emitted 30.36% more CO2 than stubble mulched soils. Ploughed soils emitted 30.77% more CH4 than no-tilled soils, no-tilled soils emitted 20% more CH4 than stubble mulched soils and ploughed soils emitted 50% more CH4than stubble mulched soils. Moist soils result in decreased CO2emissions in conventional plots and increased CH4emissions in organic plots. Increasing temperature patterns are followed by a trend of increasing gas emissions. Reducing GHG emissions from agriculture and developing sustainable tillage practices can help mitigate climate change and increases the chances of stabilizing GHG concentrations and temperature control within a required range. , Thesis (MSc) -- Faculty of Science, School of Environmental Sciences, 2021
- Full Text:
- Date Issued: 2021-12