The hypolithic invertebrate community in the eastern Karoo: the role of rock size, microclimate and recolonization
- Authors: Van der Westhuizen, Tara
- Date: 2019
- Subjects: Habitat (Ecology) -- South Africa -- Karoo , Biotic communities -- South Africa -- Karoo Invertebrates Ecosystem management -- South Africa -- Karoo Soil microbial ecology
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/44191 , vital:37128
- Description: Hypolithic habitats are important for the persistence of fauna that utilize these habitats as refuges and resource patches. Little is known, however, about the composition and structure of this community in the semi-arid Karoo. The current study therefore aims to explore the patterns and processes behind hypolithic communities, through determining the effect of rock size and baboon presence on the hypolithic community, the influence of rock size on the microclimate experienced under rocks, as well as determining the short- (over five days) and long- (over 12 months) term colonisation of the hypolithic habitat following a rock rolling disturbance, in a semi-arid Karoo environment. The hypolithic fauna encountered, and the temperature and moisture content experienced under a range of rock sizes were measured. Additionally, hypolithic fauna under rocks that were rolled to mimic rock rolling by baboons were sampled after a set period (i.e. over five days and 12 months). Large rocks were found to provide a more stable microclimate than small rocks. The probability of hypolithic fauna presence was influenced by rock size and season, and hypolithic fauna abundance (except in the dry season), richness, body size and biomass did not correlate with rock size. Additionally, the probability of detecting hypolithic fauna under intermediate sized and larger rocks was greater in the presence of baboons than in the absence of baboons, and in the presence of baboons hypolithic fauna richness increased with rock size. Furthermore, it was shown that hypolithic fauna abundance and biomass did not differ under rolled rocks over a short- (i.e. over five days) or long- (i.e. over 12 months) term period. The short-term colonisation of hypolithic habitats was not influenced by season or rock density. Lastly, most of the change in hypolithic community composition (over 12 months) occurred in the first three months and thereafter the hypolithic community composition approached pre-disturbance levels in month 12. The hypolithic habitat was shown to be influenced by a variety of conditions and processes affecting hypolithic community composition and structure. This study therefore contributes to our understanding of the hypolithic invertebrate community in the eastern Karoo, and the influence of rock size, baboon presence, microclimate and colonisation on hypolithic community composition and structure.
- Full Text:
- Date Issued: 2019
- Authors: Van der Westhuizen, Tara
- Date: 2019
- Subjects: Habitat (Ecology) -- South Africa -- Karoo , Biotic communities -- South Africa -- Karoo Invertebrates Ecosystem management -- South Africa -- Karoo Soil microbial ecology
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/44191 , vital:37128
- Description: Hypolithic habitats are important for the persistence of fauna that utilize these habitats as refuges and resource patches. Little is known, however, about the composition and structure of this community in the semi-arid Karoo. The current study therefore aims to explore the patterns and processes behind hypolithic communities, through determining the effect of rock size and baboon presence on the hypolithic community, the influence of rock size on the microclimate experienced under rocks, as well as determining the short- (over five days) and long- (over 12 months) term colonisation of the hypolithic habitat following a rock rolling disturbance, in a semi-arid Karoo environment. The hypolithic fauna encountered, and the temperature and moisture content experienced under a range of rock sizes were measured. Additionally, hypolithic fauna under rocks that were rolled to mimic rock rolling by baboons were sampled after a set period (i.e. over five days and 12 months). Large rocks were found to provide a more stable microclimate than small rocks. The probability of hypolithic fauna presence was influenced by rock size and season, and hypolithic fauna abundance (except in the dry season), richness, body size and biomass did not correlate with rock size. Additionally, the probability of detecting hypolithic fauna under intermediate sized and larger rocks was greater in the presence of baboons than in the absence of baboons, and in the presence of baboons hypolithic fauna richness increased with rock size. Furthermore, it was shown that hypolithic fauna abundance and biomass did not differ under rolled rocks over a short- (i.e. over five days) or long- (i.e. over 12 months) term period. The short-term colonisation of hypolithic habitats was not influenced by season or rock density. Lastly, most of the change in hypolithic community composition (over 12 months) occurred in the first three months and thereafter the hypolithic community composition approached pre-disturbance levels in month 12. The hypolithic habitat was shown to be influenced by a variety of conditions and processes affecting hypolithic community composition and structure. This study therefore contributes to our understanding of the hypolithic invertebrate community in the eastern Karoo, and the influence of rock size, baboon presence, microclimate and colonisation on hypolithic community composition and structure.
- Full Text:
- Date Issued: 2019
The hepatoprotective capacity of selected natural products from South Africa
- Authors: Reddy, Shanika
- Date: 2019
- Subjects: Hepatology , Liver -- Physiology Liver -- Pathophysiology Liver -- Diseases
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/43622 , vital:36948
- Description: Drug-induced liver injury (DILI) is recognized as a significant clinical problem, which may account for up to 50% of all cases of acute liver failure. DILI is initiated by the bioactivation of parent drug molecules to produce chemically reactive metabolites. These reactive intermediates induce mitochondrial dysfunction and oxidative stress leading to glutathione (GSH) depletion and damage to cellular proteins, lipids and nucleic acids, which eventually culminates in necrotic cell death. The principal objective of this study is to establish an in vitro screening platform to identify potential hepatoprotective natural products (plants and mushrooms) from South Africa (SA). Aqueous plant extracts (Cyclopia intermedia, Opuntia ficus indica and Kigelia africana), and aqueous and ethanolic macrofungal extracts (Ganoderma lucidum, Russula capensis, Pleurotus ostreatus and Lenzites elegans) were prepared and screened against HepG2 and VERO cells to assess their safety using Hoechst 33342-PI dual labelling. A drug-induced hepatotoxic model was established, using the dietary supplement menadione (vitamin K3). Hoechst 33342- PI, -CellROX® Orange and -TMRE dual labelling was used for necrosis, oxidative stress and mitochondrial membrane potential depolarization (ΔΨm) detection, respectively. The accuracy of the hepatoprotection model was confirmed through HepG2 cellbased assays (Hoechst 33342- PI, -CellROX® Orange and -TMRE dual labelling) that measured the protective effects of natural products against the menadione-induced toxicity, anti-oxidant assays (DPPH, NO, ORAC, CAPe and FRAP) that measured their anti-oxidant potential and enzyme assays (βglucuronidase, carboxylesterase and CYP450 isoform 3A4) that measured their effects on drug metabolism. Silymarin was used as a positive control for each assay. Menadione displayed significant cell death, increased oxidative stress and decreased ΔΨm at an elevated concentration of 100 μM; confirming the hepatotoxicity model, where necroptosis was suspected to be menadione’s cell death mode. Only ethanolic G. lucidum was cytotoxic. All three aqueous plant extracts demonstrated strong anti-oxidant capacities out of all the tested extracts; where C. intermedia displayed the most promising DPPH, NO, ORAC, CAPe and FRAP activity, followed by aqueous G. lucidum. Aqueous plant and ethanolic macrofungal extracts (C. intermedia, O. ficus indica, K. africana, and ethanolic P. ostreatus, R. capensis) displayed decreased menadione-induced ROS production and protected against menadione-induced ΔΨm depolarization, posing them and aqueous G. lucidum potential therapeutic interventions for DILI. Ethanolic L. elegans demonstrated the highest enzyme inhibition for each assay and presented genotoxicity, ruling it out as a therapeutic strategy against DILI. Together these assays addressed several aspects relating to DILI and hepatoprotection, and served as a good starting point in evaluating the therapeutic value of natural products from South Africa.
- Full Text:
- Date Issued: 2019
- Authors: Reddy, Shanika
- Date: 2019
- Subjects: Hepatology , Liver -- Physiology Liver -- Pathophysiology Liver -- Diseases
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/43622 , vital:36948
- Description: Drug-induced liver injury (DILI) is recognized as a significant clinical problem, which may account for up to 50% of all cases of acute liver failure. DILI is initiated by the bioactivation of parent drug molecules to produce chemically reactive metabolites. These reactive intermediates induce mitochondrial dysfunction and oxidative stress leading to glutathione (GSH) depletion and damage to cellular proteins, lipids and nucleic acids, which eventually culminates in necrotic cell death. The principal objective of this study is to establish an in vitro screening platform to identify potential hepatoprotective natural products (plants and mushrooms) from South Africa (SA). Aqueous plant extracts (Cyclopia intermedia, Opuntia ficus indica and Kigelia africana), and aqueous and ethanolic macrofungal extracts (Ganoderma lucidum, Russula capensis, Pleurotus ostreatus and Lenzites elegans) were prepared and screened against HepG2 and VERO cells to assess their safety using Hoechst 33342-PI dual labelling. A drug-induced hepatotoxic model was established, using the dietary supplement menadione (vitamin K3). Hoechst 33342- PI, -CellROX® Orange and -TMRE dual labelling was used for necrosis, oxidative stress and mitochondrial membrane potential depolarization (ΔΨm) detection, respectively. The accuracy of the hepatoprotection model was confirmed through HepG2 cellbased assays (Hoechst 33342- PI, -CellROX® Orange and -TMRE dual labelling) that measured the protective effects of natural products against the menadione-induced toxicity, anti-oxidant assays (DPPH, NO, ORAC, CAPe and FRAP) that measured their anti-oxidant potential and enzyme assays (βglucuronidase, carboxylesterase and CYP450 isoform 3A4) that measured their effects on drug metabolism. Silymarin was used as a positive control for each assay. Menadione displayed significant cell death, increased oxidative stress and decreased ΔΨm at an elevated concentration of 100 μM; confirming the hepatotoxicity model, where necroptosis was suspected to be menadione’s cell death mode. Only ethanolic G. lucidum was cytotoxic. All three aqueous plant extracts demonstrated strong anti-oxidant capacities out of all the tested extracts; where C. intermedia displayed the most promising DPPH, NO, ORAC, CAPe and FRAP activity, followed by aqueous G. lucidum. Aqueous plant and ethanolic macrofungal extracts (C. intermedia, O. ficus indica, K. africana, and ethanolic P. ostreatus, R. capensis) displayed decreased menadione-induced ROS production and protected against menadione-induced ΔΨm depolarization, posing them and aqueous G. lucidum potential therapeutic interventions for DILI. Ethanolic L. elegans demonstrated the highest enzyme inhibition for each assay and presented genotoxicity, ruling it out as a therapeutic strategy against DILI. Together these assays addressed several aspects relating to DILI and hepatoprotection, and served as a good starting point in evaluating the therapeutic value of natural products from South Africa.
- Full Text:
- Date Issued: 2019
The hepatoprotective capacity of selected natural products from South Africa
- Authors: Reddy, Shanika
- Date: 2019
- Subjects: Liver -- Physiology
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/43611 , vital:36929
- Description: Drug-induced liver injury (DILI) is recognized as a significant clinical problem, which may account for up to 50% of all cases of acute liver failure. DILI is initiated by the bioactivation of parent drug molecules to produce chemically reactive metabolites. These reactive intermediates induce mitochondrial dysfunction and oxidative stress leading to glutathione (GSH) depletion and damage to cellular proteins, lipids and nucleic acids, which eventually culminates in necrotic cell death. The principal objective of this study is to establish an in vitro screening platform to identify potential hepatoprotective natural products (plants and mushrooms) from South Africa (SA). Aqueous plant extracts (Cyclopia intermedia, Opuntia ficus indica and Kigelia africana), and aqueous and ethanolic macrofungal extracts (Ganoderma lucidum, Russula capensis, Pleurotus ostreatus and Lenzites elegans) were prepared and screened against HepG2 and VERO cells to assess their safety using Hoechst 33342-PI dual labelling. A drug-induced hepatotoxic model was established, using the dietary supplement menadione (vitamin K3). Hoechst 33342- PI, -CellROX® Orange and -TMRE dual labelling was used for necrosis, oxidative stress and mitochondrial membrane potential depolarization (ΔΨm) detection, respectively. The accuracy of the hepatoprotection model was confirmed through HepG2 cellbased assays (Hoechst 33342- PI, -CellROX® Orange and -TMRE dual labelling) that measured the protective effects of natural products against the menadione-induced toxicity, anti-oxidant assays (DPPH, NO, ORAC, CAPe and FRAP) that measured their anti-oxidant potential and enzyme assays (βglucuronidase, carboxylesterase and CYP450 isoform 3A4) that measured their effects on drug metabolism. Silymarin was used as a positive control for each assay. Menadione displayed significant cell death, increased oxidative stress and decreased ΔΨm at an elevated concentration of 100 μM; confirming the hepatotoxicity model, where necroptosis was suspected to be menadione’s cell death mode. Only ethanolic G. lucidum was cytotoxic. All three aqueous plant extracts demonstrated strong anti-oxidant capacities out of all the tested extracts; where C. intermedia displayed the most promising DPPH, NO, ORAC, CAPe and FRAP activity, followed by aqueous G. lucidum. Aqueous plant and ethanolic macrofungal extracts (C. intermedia, O. ficus indica, K. africana, and ethanolic P. ostreatus, R. capensis) displayed decreased menadione-induced ROS production and protected against menadione-induced ΔΨm depolarization, posing them and aqueous G. lucidum potential therapeutic interventions for DILI. Ethanolic L. elegans demonstrated the highest enzyme inhibition for each assay and presented genotoxicity, ruling it out as a therapeutic strategy against DILI. Together these assays addressed several aspects relating to DILI and hepatoprotection, and served as a good starting point in evaluating the therapeutic value of natural products from South Africa.
- Full Text:
- Date Issued: 2019
- Authors: Reddy, Shanika
- Date: 2019
- Subjects: Liver -- Physiology
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/43611 , vital:36929
- Description: Drug-induced liver injury (DILI) is recognized as a significant clinical problem, which may account for up to 50% of all cases of acute liver failure. DILI is initiated by the bioactivation of parent drug molecules to produce chemically reactive metabolites. These reactive intermediates induce mitochondrial dysfunction and oxidative stress leading to glutathione (GSH) depletion and damage to cellular proteins, lipids and nucleic acids, which eventually culminates in necrotic cell death. The principal objective of this study is to establish an in vitro screening platform to identify potential hepatoprotective natural products (plants and mushrooms) from South Africa (SA). Aqueous plant extracts (Cyclopia intermedia, Opuntia ficus indica and Kigelia africana), and aqueous and ethanolic macrofungal extracts (Ganoderma lucidum, Russula capensis, Pleurotus ostreatus and Lenzites elegans) were prepared and screened against HepG2 and VERO cells to assess their safety using Hoechst 33342-PI dual labelling. A drug-induced hepatotoxic model was established, using the dietary supplement menadione (vitamin K3). Hoechst 33342- PI, -CellROX® Orange and -TMRE dual labelling was used for necrosis, oxidative stress and mitochondrial membrane potential depolarization (ΔΨm) detection, respectively. The accuracy of the hepatoprotection model was confirmed through HepG2 cellbased assays (Hoechst 33342- PI, -CellROX® Orange and -TMRE dual labelling) that measured the protective effects of natural products against the menadione-induced toxicity, anti-oxidant assays (DPPH, NO, ORAC, CAPe and FRAP) that measured their anti-oxidant potential and enzyme assays (βglucuronidase, carboxylesterase and CYP450 isoform 3A4) that measured their effects on drug metabolism. Silymarin was used as a positive control for each assay. Menadione displayed significant cell death, increased oxidative stress and decreased ΔΨm at an elevated concentration of 100 μM; confirming the hepatotoxicity model, where necroptosis was suspected to be menadione’s cell death mode. Only ethanolic G. lucidum was cytotoxic. All three aqueous plant extracts demonstrated strong anti-oxidant capacities out of all the tested extracts; where C. intermedia displayed the most promising DPPH, NO, ORAC, CAPe and FRAP activity, followed by aqueous G. lucidum. Aqueous plant and ethanolic macrofungal extracts (C. intermedia, O. ficus indica, K. africana, and ethanolic P. ostreatus, R. capensis) displayed decreased menadione-induced ROS production and protected against menadione-induced ΔΨm depolarization, posing them and aqueous G. lucidum potential therapeutic interventions for DILI. Ethanolic L. elegans demonstrated the highest enzyme inhibition for each assay and presented genotoxicity, ruling it out as a therapeutic strategy against DILI. Together these assays addressed several aspects relating to DILI and hepatoprotection, and served as a good starting point in evaluating the therapeutic value of natural products from South Africa.
- Full Text:
- Date Issued: 2019
The growth and recovery of mangroves at three South African study sites
- Authors: Mbense, Sinegugu
- Date: 2017
- Subjects: Mangrove forests -- South Africa Mangrove ecology -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/11931 , vital:27008
- Description: Mangroves in South Africa are prone to anthropogenic pressures such as browsing and trampling by livestock and by natural disturbances such as drought and floods. These mangroves exist at one of the most southerly limits in the world providing a unique opportunity to study recovery and resilience to change. This study used long term data at three South African study sites located in the subtropical (St Lucia Estuary) and warm temperate regions (Nxaxo and Kobonqaba estuaries) to compare mangrove growth rate, population structure and responses to disturbance. The first objective was investigated at St Lucia Estuary where site specific or microhabitat differences were measured to assess the influence of these on mangrove growth and population structure. It was suggested that site - specific variability would ensure mangrove survival and analysis showed that seedlings were present at different sites in different years. There was always some recruitment but often little survival to the next size class. Over time seedling numbers were quite variable and self – thinning of adults was evident. The second objective was to identify the environmental factors influencing population density and growth. Results showed that sediment moisture and salinity influenced seedling and adult density due to fluctuations in estuary water level. Mangrove growth rates for Avicennia marina in terms of height was faster (40 – 75 cm yr-1 ) at Site 1 where conditions were waterlogged and moderately saline and slower (5 – 25 cm yr1 ) in dry and hypersaline conditions at Site 4. Overall mangroves at St Lucia have shown persistence through drought and fluctuations in environmental conditions however resilience may be hindered at sites that are subjected to partially flooding and prolonged waterlogging. The second site was Nxaxo Estuary in the Eastern Cape where cattle exclusion plots (nonbrowsed) and control plots (browsed) were used to assess the recovery of A. marina trees from cattle browsing. Trees in the browsed plots showed no vertical growth while trees in the non-browsed plots grew significantly faster (5.4 ± 0.5 cm yr-1). When cattle were prevented from entering the mangrove area, the trees recovered fairly quickly and within 3 years growth was similar in both the non – browsed (17.9 ± 3.2 cm yr -1) and browsed plots (18 ± 1.6 cm yr -1). Lastly, mangrove recovery was investigated at Kobonqaba Estuary where long-term closure of the mouth to the sea resulted in high water levels, inundation of pneumatophores and die-back of the majority of the mangroves. This study measured the recovery of the mangroves by assessing changes in vegetation cover and sediment characteristics along transects. High initial porewater nutrient concentrations promoted salt marsh growth and plants increased average cover from 0% in 2011 to 18.9% (2013) and 50% in 2015. The total number of A. marina individuals increased from only seven to 27 individuals over four years. Salt marsh competition and facilitation will likely influence mangrove recovery in the future. Overall it was concluded that when a short term pressure (cattle browsing) is alleviated, mangrove forests even at warm temperate sites are able to recovery rapidly by increasing growth and seedling establishment. However, mangroves in the subtropical sites show more resilience and recovery potential to long term pressures such as fluctuating environmental conditions because of faster growth rates.
- Full Text:
- Date Issued: 2017
- Authors: Mbense, Sinegugu
- Date: 2017
- Subjects: Mangrove forests -- South Africa Mangrove ecology -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/11931 , vital:27008
- Description: Mangroves in South Africa are prone to anthropogenic pressures such as browsing and trampling by livestock and by natural disturbances such as drought and floods. These mangroves exist at one of the most southerly limits in the world providing a unique opportunity to study recovery and resilience to change. This study used long term data at three South African study sites located in the subtropical (St Lucia Estuary) and warm temperate regions (Nxaxo and Kobonqaba estuaries) to compare mangrove growth rate, population structure and responses to disturbance. The first objective was investigated at St Lucia Estuary where site specific or microhabitat differences were measured to assess the influence of these on mangrove growth and population structure. It was suggested that site - specific variability would ensure mangrove survival and analysis showed that seedlings were present at different sites in different years. There was always some recruitment but often little survival to the next size class. Over time seedling numbers were quite variable and self – thinning of adults was evident. The second objective was to identify the environmental factors influencing population density and growth. Results showed that sediment moisture and salinity influenced seedling and adult density due to fluctuations in estuary water level. Mangrove growth rates for Avicennia marina in terms of height was faster (40 – 75 cm yr-1 ) at Site 1 where conditions were waterlogged and moderately saline and slower (5 – 25 cm yr1 ) in dry and hypersaline conditions at Site 4. Overall mangroves at St Lucia have shown persistence through drought and fluctuations in environmental conditions however resilience may be hindered at sites that are subjected to partially flooding and prolonged waterlogging. The second site was Nxaxo Estuary in the Eastern Cape where cattle exclusion plots (nonbrowsed) and control plots (browsed) were used to assess the recovery of A. marina trees from cattle browsing. Trees in the browsed plots showed no vertical growth while trees in the non-browsed plots grew significantly faster (5.4 ± 0.5 cm yr-1). When cattle were prevented from entering the mangrove area, the trees recovered fairly quickly and within 3 years growth was similar in both the non – browsed (17.9 ± 3.2 cm yr -1) and browsed plots (18 ± 1.6 cm yr -1). Lastly, mangrove recovery was investigated at Kobonqaba Estuary where long-term closure of the mouth to the sea resulted in high water levels, inundation of pneumatophores and die-back of the majority of the mangroves. This study measured the recovery of the mangroves by assessing changes in vegetation cover and sediment characteristics along transects. High initial porewater nutrient concentrations promoted salt marsh growth and plants increased average cover from 0% in 2011 to 18.9% (2013) and 50% in 2015. The total number of A. marina individuals increased from only seven to 27 individuals over four years. Salt marsh competition and facilitation will likely influence mangrove recovery in the future. Overall it was concluded that when a short term pressure (cattle browsing) is alleviated, mangrove forests even at warm temperate sites are able to recovery rapidly by increasing growth and seedling establishment. However, mangroves in the subtropical sites show more resilience and recovery potential to long term pressures such as fluctuating environmental conditions because of faster growth rates.
- Full Text:
- Date Issued: 2017
The Grootfontein aquifer at Mahikeng, South Africa as hydro-social system
- Authors: Cobbing, Jude Edmund
- Date: 2017
- Subjects: Groundwater -- South Africa -- Mahikeng Hydrogeology -- South Africa -- Mahikeng
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10948/21351 , vital:29484
- Description: The Grootfontein aquifer is located about 20 km south east of Mahikeng, North West Province, South Africa, and currently supplies about 20% of Mahikeng’s water. Formed in weathered Malmani Subgroup dolomites, the aquifer contains good quality groundwater that could potentially supply more of Mahikeng’s water, as well as provide a strategic reserve of water for use during droughts. Over-abstraction of groundwater from the aquifer, mainly by irrigating farmers but also by the boreholes supplying Mahikeng, has caused the natural groundwater level to drop at a rate of about 0.4 m per year since the 1970s, leading to water level declines of as much as 28 m in parts of the aquifer. Although the Grootfontein aquifer is one of the best studied aquifers in South Africa hydrogeologically, efforts to address these declines since the 1970s have largely failed. This research combines hydrogeological evidence with social research (interviews and participant-observation) and the principles of Earth Stewardship Science to argue that the aquifer functions as a hydro-social system, and that institutional characteristics are the root cause of a collective inability to restore the aquifer to its full potential as a water resource. A sub-optimal and undesirable Nash equilibrium prevails, in which major groundwater users are unable or unwilling to reduce abstraction. The situation has significant cost and risk implications for the environmental, economic and social sectors, and contributes to insecurity, pessimism, inequality and mistrust. An effective local forum with appropriate powers, supported and mandated by the Department of Water and Sanitation, is needed to begin the work of dismantling the sub-optimal equilibrium to realise the potential of the Grootfontein aquifer. Such a forum would require a shared understanding of the hydrogeological mechanisms of the aquifer as well as its social and institutional functioning, since these influence each other in complex ways.
- Full Text:
- Date Issued: 2017
- Authors: Cobbing, Jude Edmund
- Date: 2017
- Subjects: Groundwater -- South Africa -- Mahikeng Hydrogeology -- South Africa -- Mahikeng
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10948/21351 , vital:29484
- Description: The Grootfontein aquifer is located about 20 km south east of Mahikeng, North West Province, South Africa, and currently supplies about 20% of Mahikeng’s water. Formed in weathered Malmani Subgroup dolomites, the aquifer contains good quality groundwater that could potentially supply more of Mahikeng’s water, as well as provide a strategic reserve of water for use during droughts. Over-abstraction of groundwater from the aquifer, mainly by irrigating farmers but also by the boreholes supplying Mahikeng, has caused the natural groundwater level to drop at a rate of about 0.4 m per year since the 1970s, leading to water level declines of as much as 28 m in parts of the aquifer. Although the Grootfontein aquifer is one of the best studied aquifers in South Africa hydrogeologically, efforts to address these declines since the 1970s have largely failed. This research combines hydrogeological evidence with social research (interviews and participant-observation) and the principles of Earth Stewardship Science to argue that the aquifer functions as a hydro-social system, and that institutional characteristics are the root cause of a collective inability to restore the aquifer to its full potential as a water resource. A sub-optimal and undesirable Nash equilibrium prevails, in which major groundwater users are unable or unwilling to reduce abstraction. The situation has significant cost and risk implications for the environmental, economic and social sectors, and contributes to insecurity, pessimism, inequality and mistrust. An effective local forum with appropriate powers, supported and mandated by the Department of Water and Sanitation, is needed to begin the work of dismantling the sub-optimal equilibrium to realise the potential of the Grootfontein aquifer. Such a forum would require a shared understanding of the hydrogeological mechanisms of the aquifer as well as its social and institutional functioning, since these influence each other in complex ways.
- Full Text:
- Date Issued: 2017
The geology of the Witteberg group, Cape supergroup, with specific focus on the Perdepoort member as a potential silica source
- Authors: Olivier, Wernich Corné
- Date: 2010
- Subjects: Geology -- South Africa -- Witteberg Group , Stratiography -- South Africa -- Witteberg Group , Silicate minerals -- South Africa -- Witteberg Group
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10660 , http://hdl.handle.net/10948/1386 , http://hdl.handle.net/10948/d1012889 , Geology -- South Africa -- Witteberg Group , Stratiography -- South Africa -- Witteberg Group , Silicate minerals -- South Africa -- Witteberg Group
- Description: Selected outcrops of the Upper Devonian to Lower Carboniferous, Witteberg Group, Cape Supergroup were mineralogically and structurally analyzed. The study area is located approximately 30km northwest of Kirkwood and 10km south of Darlington Dam, Eastern Cape, South Africa. Strata predominantly consist of arenaceous Witpoort Formation, which includes the Perdepoort, and Rooirand Members. The Perdepoort Member is a thinly bedded quartzite also known as the "white streak". The Rooirand Member quartzite is a highly iron stained red-brown quartzite. The dark-grey, pyritic rich shales of the Kweekvlei Formation overlie the Witpoort Formation in the southern half of the study site. These shales are highly deformed and display closely spaced thrust faults and close folds. The study area encapsulates a range of folding from tight to open folds. Faulting consists of low angle north verging thrust fault, south verging back thrusts, south and north dipping normal faults, and strike-slip faults. Closely spaced, fore-land verging thrusts faults predominate over hinterland verging back thrusts. Normal faulting post-dates thrust faulting and utilized weaknesses in axial planar cleavage and in certain instances existing thrust fault planes. Strike-slip faulting post-dates thrusting and has in places reactivated pre-existing thrust fault planes. Macro scale folding includes overturned synclines and large anticlines which have been eroded, exposing older strata. Fold axes plunge at low to moderate angles west-southwest. This correlates with tension gashes which indicate north westward directed forces. Eastward directed forces are confirmed by the presence of tension gashes and strike-slip movement. The local geology displays north westward directed compression followed by strike-slip movement. Normal faulting post-dates all other structures and is associated with the Mesozoic break-up of Gondwana. The Perdepoort Member was sampled along strike, at different outcrop latitudes. Seven samples were selected for scanning electron microscope analysis. Samples are composed almost entirely of quartz; accessories include, biotite, muscovite, sericite, baryte, and apatite. Epigenetic hematite is present along cracks within certain samples Epigenetic hematite occur along cracks with oxides and phosphates in the form of rutile, apatite and monazite present in a number of samples. When compared to other silica extraction operations the Perdepoort Member appears viable for explotation. However, for the solar cell industry the purity of this horizon is clearly far below that required for industy.
- Full Text:
- Date Issued: 2010
- Authors: Olivier, Wernich Corné
- Date: 2010
- Subjects: Geology -- South Africa -- Witteberg Group , Stratiography -- South Africa -- Witteberg Group , Silicate minerals -- South Africa -- Witteberg Group
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10660 , http://hdl.handle.net/10948/1386 , http://hdl.handle.net/10948/d1012889 , Geology -- South Africa -- Witteberg Group , Stratiography -- South Africa -- Witteberg Group , Silicate minerals -- South Africa -- Witteberg Group
- Description: Selected outcrops of the Upper Devonian to Lower Carboniferous, Witteberg Group, Cape Supergroup were mineralogically and structurally analyzed. The study area is located approximately 30km northwest of Kirkwood and 10km south of Darlington Dam, Eastern Cape, South Africa. Strata predominantly consist of arenaceous Witpoort Formation, which includes the Perdepoort, and Rooirand Members. The Perdepoort Member is a thinly bedded quartzite also known as the "white streak". The Rooirand Member quartzite is a highly iron stained red-brown quartzite. The dark-grey, pyritic rich shales of the Kweekvlei Formation overlie the Witpoort Formation in the southern half of the study site. These shales are highly deformed and display closely spaced thrust faults and close folds. The study area encapsulates a range of folding from tight to open folds. Faulting consists of low angle north verging thrust fault, south verging back thrusts, south and north dipping normal faults, and strike-slip faults. Closely spaced, fore-land verging thrusts faults predominate over hinterland verging back thrusts. Normal faulting post-dates thrust faulting and utilized weaknesses in axial planar cleavage and in certain instances existing thrust fault planes. Strike-slip faulting post-dates thrusting and has in places reactivated pre-existing thrust fault planes. Macro scale folding includes overturned synclines and large anticlines which have been eroded, exposing older strata. Fold axes plunge at low to moderate angles west-southwest. This correlates with tension gashes which indicate north westward directed forces. Eastward directed forces are confirmed by the presence of tension gashes and strike-slip movement. The local geology displays north westward directed compression followed by strike-slip movement. Normal faulting post-dates all other structures and is associated with the Mesozoic break-up of Gondwana. The Perdepoort Member was sampled along strike, at different outcrop latitudes. Seven samples were selected for scanning electron microscope analysis. Samples are composed almost entirely of quartz; accessories include, biotite, muscovite, sericite, baryte, and apatite. Epigenetic hematite is present along cracks within certain samples Epigenetic hematite occur along cracks with oxides and phosphates in the form of rutile, apatite and monazite present in a number of samples. When compared to other silica extraction operations the Perdepoort Member appears viable for explotation. However, for the solar cell industry the purity of this horizon is clearly far below that required for industy.
- Full Text:
- Date Issued: 2010
The Geography of Inequality in Port Elizabeth : Post-apartheid Trends
- Authors: Mc Arthur, Brogan Erin
- Date: 2020
- Subjects: Equality -- South Africa -- Port Elizabeth
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/48478 , vital:40880
- Description: This study aims to identify post-apartheid trends of inequality within Port Elizabeth, by analysing the spatial distribution of social well-being from 1996 to 2011. The spatial distribution of social well-being highlights the geography of inequality within Port Elizabeth, focusing on social indicators as a measure of social well-being. Mapping of these social indicators illustrates various levels of social well-being throughout Port Elizabeth based on the formulation of social indicators, application of these social indicators to census data, data processing and mapping. This results in the mapping of poverty, employment, education and standard of living for the census years of 1996, 2001 and 2011. From the mapping process, trends of social well-being and the associated inequality are illustrated and analysed, while providing insight into the progress of social well-being within a South African city. The findings of this study suggest that social well-being has incurred changes over time which have aided in the improvement of social well-being throughout Port Elizabeth. This improvement is marked by the relative increase and decrease of selected social indicators and their interrelated nature. The various social indicators, although focused on different datasets, highlight similar patterns of progress throughout their spatial distribution over time. As such, similar patterns of inequality can be noted throughout Port Elizabeth for various social indicators. Based on these similarities and the trends identified within the spatial distribution of inequality in Port Elizabeth, a progression towards a more even distribution throughout the study area was noted from 1996 through to 2011.
- Full Text:
- Date Issued: 2020
- Authors: Mc Arthur, Brogan Erin
- Date: 2020
- Subjects: Equality -- South Africa -- Port Elizabeth
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/48478 , vital:40880
- Description: This study aims to identify post-apartheid trends of inequality within Port Elizabeth, by analysing the spatial distribution of social well-being from 1996 to 2011. The spatial distribution of social well-being highlights the geography of inequality within Port Elizabeth, focusing on social indicators as a measure of social well-being. Mapping of these social indicators illustrates various levels of social well-being throughout Port Elizabeth based on the formulation of social indicators, application of these social indicators to census data, data processing and mapping. This results in the mapping of poverty, employment, education and standard of living for the census years of 1996, 2001 and 2011. From the mapping process, trends of social well-being and the associated inequality are illustrated and analysed, while providing insight into the progress of social well-being within a South African city. The findings of this study suggest that social well-being has incurred changes over time which have aided in the improvement of social well-being throughout Port Elizabeth. This improvement is marked by the relative increase and decrease of selected social indicators and their interrelated nature. The various social indicators, although focused on different datasets, highlight similar patterns of progress throughout their spatial distribution over time. As such, similar patterns of inequality can be noted throughout Port Elizabeth for various social indicators. Based on these similarities and the trends identified within the spatial distribution of inequality in Port Elizabeth, a progression towards a more even distribution throughout the study area was noted from 1996 through to 2011.
- Full Text:
- Date Issued: 2020
The GARCH-EVT-Copula model and simulation in scenario-based asset allocation
- McEwan, Peter Gareth Fredric
- Authors: McEwan, Peter Gareth Fredric
- Date: 2016
- Subjects: Extreme value theory GARCH model
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/11732 , vital:26961
- Description: Financial market integration, in particular, portfolio allocations from advanced economies to South African markets, continues to strengthen volatility linkages and quicken volatility transmissions between participating markets. Largely as a result, South African portfolios are net recipients of returns and volatility shocks emanating from major world markets. In light of these, and other, sources of risk, this dissertation proposes a methodology to improve risk management systems in funds by building a contemporary asset allocation framework that offers practitioners an opportunity to explicitly model combinations of hypothesised global risks and the effects on their investments. The framework models portfolio return variables and their key risk driver variables separately and then joins them to model their combined dependence structure. The separate modelling of univariate and multivariate (MV) components admits the benefit of capturing the data generating processes with improved accuracy. Univariate variables were modelled using ARMA-GARCH-family structures paired with a variety of skewed and leptokurtic conditional distributions. Model residuals were fit using the Peaks-over-Threshold method from Extreme Value Theory for the tails and a non-parametric, kernel density for the interior, forming a completed semi-parametric distribution (SPD) for each variable. Asset and risk factor returns were then combined and their dependence structure jointly modelled with a MV Student t copula. Finally, the SPD margins and Student t copula were used to construct a MV meta t distribution. Monte Carlo simulations were generated from the fitted MV meta t distribution on which an out-of-sample test was conducted. The 2014-to-2015 horizon served to proxy as an out-of-sample, forward-looking scenario for a set of key risk factors against which a hypothetical, diversified portfolio was optimised. Traditional mean-variance and contemporary mean-CVaR optimisation techniques were used and their results compared. As an addendum, performance over the in-sample 2008 financial crisis was reported. The final Objective (7) addressed management and conservation strategies for the NMBM. The NMBM wetland database that was produced during this research is currently being used by the Municipality and will be added to the latest National Wetland Map. From the database, and tools developed in this research, approximately 90 wetlands have been identified as being highly vulnerable due to anthropogenic and environmental factors (Chapter 6) and should be earmarked as key conservation priority areas. Based on field experience and data collected, this study has also made conservation and rehabilitation recommendations for eight locations. Recommendations are also provided for six more wetland systems (or regions) that should be prioritised for further research, as these systems lack fundamental information on where the threat of anthropogenic activities affecting them is greatest. This study has made a significant contribution to understanding the underlying geomorphological processes in depressions, seeps and wetland flats. The desktop mapping component of this study illustrated the dominance of wetlands in the wetter parts of the Municipality. Perched wetland systems were identified in the field, on shallow bedrock, calcrete or clay. The prevalence of these perches in depressions, seeps and wetland flats also highlighted the importance of rainfall in driving wetland formation, by allowing water to pool on these perches, in the NMBM. These perches are likely to be a key factor in the high number of small, ephemeral wetlands that were observed in the study area, compared to other semi-arid regions. Therefore, this research highlights the value of multi-faceted and multi-scalar wetland research and how similar approaches should be used in future research methods has been highlighted. The approach used, along with the tools/methods developed in this study have facilitated the establishment of priority areas for conservation and management within the NMBM. Furthermore, the research approach has revealed emergent wetland properties that are only apparent when looking at different spatial scales. This research has highlighted the complex biological and geomorphological interactions between wetlands that operate over various spatial and temporal scales. As such, wetland management should occur across a wetland complex, rather than individual sites, to account for these multi-scalar influences.
- Full Text:
- Date Issued: 2016
- Authors: McEwan, Peter Gareth Fredric
- Date: 2016
- Subjects: Extreme value theory GARCH model
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/11732 , vital:26961
- Description: Financial market integration, in particular, portfolio allocations from advanced economies to South African markets, continues to strengthen volatility linkages and quicken volatility transmissions between participating markets. Largely as a result, South African portfolios are net recipients of returns and volatility shocks emanating from major world markets. In light of these, and other, sources of risk, this dissertation proposes a methodology to improve risk management systems in funds by building a contemporary asset allocation framework that offers practitioners an opportunity to explicitly model combinations of hypothesised global risks and the effects on their investments. The framework models portfolio return variables and their key risk driver variables separately and then joins them to model their combined dependence structure. The separate modelling of univariate and multivariate (MV) components admits the benefit of capturing the data generating processes with improved accuracy. Univariate variables were modelled using ARMA-GARCH-family structures paired with a variety of skewed and leptokurtic conditional distributions. Model residuals were fit using the Peaks-over-Threshold method from Extreme Value Theory for the tails and a non-parametric, kernel density for the interior, forming a completed semi-parametric distribution (SPD) for each variable. Asset and risk factor returns were then combined and their dependence structure jointly modelled with a MV Student t copula. Finally, the SPD margins and Student t copula were used to construct a MV meta t distribution. Monte Carlo simulations were generated from the fitted MV meta t distribution on which an out-of-sample test was conducted. The 2014-to-2015 horizon served to proxy as an out-of-sample, forward-looking scenario for a set of key risk factors against which a hypothetical, diversified portfolio was optimised. Traditional mean-variance and contemporary mean-CVaR optimisation techniques were used and their results compared. As an addendum, performance over the in-sample 2008 financial crisis was reported. The final Objective (7) addressed management and conservation strategies for the NMBM. The NMBM wetland database that was produced during this research is currently being used by the Municipality and will be added to the latest National Wetland Map. From the database, and tools developed in this research, approximately 90 wetlands have been identified as being highly vulnerable due to anthropogenic and environmental factors (Chapter 6) and should be earmarked as key conservation priority areas. Based on field experience and data collected, this study has also made conservation and rehabilitation recommendations for eight locations. Recommendations are also provided for six more wetland systems (or regions) that should be prioritised for further research, as these systems lack fundamental information on where the threat of anthropogenic activities affecting them is greatest. This study has made a significant contribution to understanding the underlying geomorphological processes in depressions, seeps and wetland flats. The desktop mapping component of this study illustrated the dominance of wetlands in the wetter parts of the Municipality. Perched wetland systems were identified in the field, on shallow bedrock, calcrete or clay. The prevalence of these perches in depressions, seeps and wetland flats also highlighted the importance of rainfall in driving wetland formation, by allowing water to pool on these perches, in the NMBM. These perches are likely to be a key factor in the high number of small, ephemeral wetlands that were observed in the study area, compared to other semi-arid regions. Therefore, this research highlights the value of multi-faceted and multi-scalar wetland research and how similar approaches should be used in future research methods has been highlighted. The approach used, along with the tools/methods developed in this study have facilitated the establishment of priority areas for conservation and management within the NMBM. Furthermore, the research approach has revealed emergent wetland properties that are only apparent when looking at different spatial scales. This research has highlighted the complex biological and geomorphological interactions between wetlands that operate over various spatial and temporal scales. As such, wetland management should occur across a wetland complex, rather than individual sites, to account for these multi-scalar influences.
- Full Text:
- Date Issued: 2016
The further development, optimisation and application of a Yarn Dismantler
- Authors: Fassihi, Ali Akbar
- Date: 2012
- Subjects: Textile industry , Cotton yarn industry
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:10452 , http://hdl.handle.net/10948/d1016066
- Description: The fibre properties of cotton, which vary widely according to genetic and environmental conditions, determine its price and textile processing performance and product quality. It is therefore hardly surprising that cotton fibre properties are routinely measured for trading and quality control purposes, with a great deal of research having been, and still being, devoted towards developing instruments which enable the various fibre properties to be measured rapidly and accurately. In many cases, it is also necessary to be able to measure properties of cotton fibres when they have already been converted into yarn and fabric form. To do so, the yarn has to be dismantled into its component fibres, preferably without significantly changing the fibre properties. This could only be done by manually untwisting the yarn and carefully extracting the fibres from the untwisted yarn, care being taken not to break or lose any fibres in the process. This is a time consuming, laborious and labour intensive process. In view of this, a „yarn dismantler‟ which could automatically, cost effectively and within acceptable time frames, dismantle a cotton yarn into its constituent fibres, without undue damage or changes to the fibres, was developed and patented. This thesis reports the results of research undertaken to further develop, evaluate and optimize the yarn dismantler into the final prototype, as well as those relating to its practical applications, including tracking changes in fibre properties during miniature and pilot scale processing, up to, and including the yarn stage. Initial research undertaken on the original bench and first prototype models indicated that, although they produced very promising results, certain improvements and modifications were necessary, if the dismantler was to perform in an efficient and operator friendly manner at the required speeds. These included changes in the axial position of the untwisting spindle and the perforated screen of the suction drum, increasing the air suction at the perforated drum, installing a new motor for the untwisting spindle drive, separating the drives to the different parts of the unit in order to control them independently, integrating a more effective steaming unit into the unit etc. It was found that the dismantling rate had to be set to equal about 95 percent of the original twist in the yarn, and that steaming of the dismantled (untwisted) yarn on the perforated drum was necessary in order to eliminate any twist liveliness (residual torque) in the dismantled yarn, and enable it to be handled and tested on the AFIS instrument. When the final prototype Yarn Dismantler was produced, incorporating all the above mentioned improvements, it functioned very well at dismantling speeds of at least 2m/min, enabling the length of yarn required for subsequent AFIS testing to be dismantled within an acceptable time of less than 10 minutes, with excellent reproducibility and repeatability of results, also under commercial conditions. It was found that the AFIS measured length characteristics of fibres from the instrument dismantled yarns compared very well with those of fibres from manually dismantled yarns, differences in fibre length generally being less than 1mm, and it was concluded from these and other evaluation tests, that the yarn dismantler produced fibres without any significant fibre breakage. Some limited tests, carried out on commercially produced carded and combed yarns, indicated that short fibre content and dust and trash levels, as measured by the AFIS on fibres from dismantled yarn, together with the corresponding Uster Statistics, could enable a carded cotton yarn to be distinguished from a combed cotton yarn. Statistical analysis of fibre test results obtained at the different stages during miniature and pilot plant scale processing of various cottons, clearly showed that very significant changes in fibre properties could be caused by certain of the processes. For example, significant fibre breakage occurred during the drafting on the spinning frame, prior to twist insertion. The thesis provides detailed results of changes in various fibre properties, including length, short fibre content, maturity, immature fibre content, seed coat neps and fibrous neps, which occurred from the lint to the final yarn, as well as on the relationship between the properties of the fibres from the dismantled yarn and those from the lint. The results obtained have clearly demonstrated the practical value of the yarn dismantler in enabling yarns to be automatically dismantled into their constituent fibres, which can then be tested by an instrument, such as the AFIS, and the test results related to those of the original lint fibres, thereby opening up many fields of research and practical applications, some of which are captured under „Recommended Further Work‟.
- Full Text:
- Date Issued: 2012
- Authors: Fassihi, Ali Akbar
- Date: 2012
- Subjects: Textile industry , Cotton yarn industry
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:10452 , http://hdl.handle.net/10948/d1016066
- Description: The fibre properties of cotton, which vary widely according to genetic and environmental conditions, determine its price and textile processing performance and product quality. It is therefore hardly surprising that cotton fibre properties are routinely measured for trading and quality control purposes, with a great deal of research having been, and still being, devoted towards developing instruments which enable the various fibre properties to be measured rapidly and accurately. In many cases, it is also necessary to be able to measure properties of cotton fibres when they have already been converted into yarn and fabric form. To do so, the yarn has to be dismantled into its component fibres, preferably without significantly changing the fibre properties. This could only be done by manually untwisting the yarn and carefully extracting the fibres from the untwisted yarn, care being taken not to break or lose any fibres in the process. This is a time consuming, laborious and labour intensive process. In view of this, a „yarn dismantler‟ which could automatically, cost effectively and within acceptable time frames, dismantle a cotton yarn into its constituent fibres, without undue damage or changes to the fibres, was developed and patented. This thesis reports the results of research undertaken to further develop, evaluate and optimize the yarn dismantler into the final prototype, as well as those relating to its practical applications, including tracking changes in fibre properties during miniature and pilot scale processing, up to, and including the yarn stage. Initial research undertaken on the original bench and first prototype models indicated that, although they produced very promising results, certain improvements and modifications were necessary, if the dismantler was to perform in an efficient and operator friendly manner at the required speeds. These included changes in the axial position of the untwisting spindle and the perforated screen of the suction drum, increasing the air suction at the perforated drum, installing a new motor for the untwisting spindle drive, separating the drives to the different parts of the unit in order to control them independently, integrating a more effective steaming unit into the unit etc. It was found that the dismantling rate had to be set to equal about 95 percent of the original twist in the yarn, and that steaming of the dismantled (untwisted) yarn on the perforated drum was necessary in order to eliminate any twist liveliness (residual torque) in the dismantled yarn, and enable it to be handled and tested on the AFIS instrument. When the final prototype Yarn Dismantler was produced, incorporating all the above mentioned improvements, it functioned very well at dismantling speeds of at least 2m/min, enabling the length of yarn required for subsequent AFIS testing to be dismantled within an acceptable time of less than 10 minutes, with excellent reproducibility and repeatability of results, also under commercial conditions. It was found that the AFIS measured length characteristics of fibres from the instrument dismantled yarns compared very well with those of fibres from manually dismantled yarns, differences in fibre length generally being less than 1mm, and it was concluded from these and other evaluation tests, that the yarn dismantler produced fibres without any significant fibre breakage. Some limited tests, carried out on commercially produced carded and combed yarns, indicated that short fibre content and dust and trash levels, as measured by the AFIS on fibres from dismantled yarn, together with the corresponding Uster Statistics, could enable a carded cotton yarn to be distinguished from a combed cotton yarn. Statistical analysis of fibre test results obtained at the different stages during miniature and pilot plant scale processing of various cottons, clearly showed that very significant changes in fibre properties could be caused by certain of the processes. For example, significant fibre breakage occurred during the drafting on the spinning frame, prior to twist insertion. The thesis provides detailed results of changes in various fibre properties, including length, short fibre content, maturity, immature fibre content, seed coat neps and fibrous neps, which occurred from the lint to the final yarn, as well as on the relationship between the properties of the fibres from the dismantled yarn and those from the lint. The results obtained have clearly demonstrated the practical value of the yarn dismantler in enabling yarns to be automatically dismantled into their constituent fibres, which can then be tested by an instrument, such as the AFIS, and the test results related to those of the original lint fibres, thereby opening up many fields of research and practical applications, some of which are captured under „Recommended Further Work‟.
- Full Text:
- Date Issued: 2012
The foraging ecology of Wedge-tailed Shearwaters (Ardenna Pacifica) in the tropical Western Indian Ocean
- Authors: Keys, Danielle Zuanda
- Date: 2018
- Subjects: Birds of prey -- Behavior -- South Africa -- Western Cape , Animal behavior , Wildlife conservation
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/31251 , vital:31348
- Description: The distribution and abundance of prey largely influences how marine predators forage. Thus, understanding how marine predators respond to such changes becomes imperative when making decisions in marine spatial planning, especially in light of global climate change. Tropical marine systems are known for their relatively low productivity and high unpredictability of prey resources. Compared to higher latitudes, very few studies on seabirds have been implemented in the tropics. The Wedge-tailed Shearwater Ardenna pacifica is an Indo-Pacific tropical seabird with a wide distributional range. However, like many other seabirds, its population numbers are currently declining. Very little is known about the at-sea distribution of Wedge-tailed Shearwaters in the tropical western Indian Ocean. Therefore, this thesis investigates the foraging ecology of Wedge-tailed Shearwaters in the western Indian Ocean by tracking the fine scale movements of individuals at sea. This study was conducted in two different oceanic environments, namely D’Arros Island and Fouquet Island, St Joseph Atoll in the Amirantes Group in Seychelles archipelago as well as Réunion Island in the Mascarene archipelago during the Wedge-tailed Shearwaters breeding seasons. Here I aimed to investigate the foraging distribution of Wedge-tailed Shearwaters on Réunion Island in relation to different stages of the breeding period. I also compared the foraging ecology of all three populations, subjected to different abiotic and biotic factors. Furthermore, I investigated foraging site fidelity in individuals and repeatability within individual flight characteristics. To my knowledge, this is the first study to comprehensively investigate the foraging ecology of Wedge-tailed Shearwaters using global positioning system (GPS) loggers. This study demonstrated that the Wedge-tailed Shearwaters implement flexible foraging strategies throughout different stages of their breeding period and between different islands. In Réunion, during the shearwater breeding season, sexual segregation was prominent during early chick rearing and both sexes implemented dual foraging. As suggested by previous studies, it is likely that long trips were implemented for self-maintenance, whereas multiple short trips were implemented to meet the high energetic demands of the chicks. Several important foraging areas were identified for these Wedge-tailed Shearwaters. During incubation, shearwaters from Réunion faithfully foraged towards the south east of Madagascar near the East Madagascar Current and flew over large areas of the Mascarene Basin. During chick rearing, shearwaters significantly constricted their range closer to the colony and exploited deep waters on the south-west of Réunion Island. Shearwaters concentrated near oceanographic features such as the Pérouse Seamount (which is a known area of high productivity) as well as the Bourdonnais Ridge. There was no clear evidence for spatial or sexual segregation between individuals from the two study colonies in Seychelles during incubation and birds utilized a broader foraging range than birds from Réunion. This is likely to be the result of a large annual phytoplankton bloom which coincides with the shearwater breeding season in Seychelles, providing many foraging opportunities within the Seychelles Basin. The shearwaters from Seychelles exploited the Amirante Basin, East Somali Basin, and parts of the Seychelles archipelago. Shearwaters from D’Arros flew further east and foraged in the Mascarene Basin. Shearwaters from all populations foraged over deep, relatively unproductive waters with relatively high sea surface temperatures which are similar oceanographic features favoured by tuna. Foraging plasticity between individuals from different colonies was observed with varying flight bearings, flight durations and the maximum distances travelled from their respective colonies. Shearwaters displayed dissimilar levels of site fidelity, where shearwaters from Réunion faithfully foraged towards south east Madagascar, while shearwaters from Seychelles foraged over a wide range over the Seychelles Basin. Foraging effort for shearwaters from Fouquet was lower than shearwaters from Reunion and they spent less time at sea and foraged closer to their colony. These difference in behaviour responses between colonies may be advantageous to shearwaters, indicating that they may be able to respond to some level of environmental variability resulting from climate change and anthropogenic pressures. Lastly, during chick rearing, though shearwaters showed low levels of repeatability in flight characterising, foraging site fidelity was high amongst some of the individuals. Here we see that shearwaters continuously rely on permanent features, like seamounts and possibly fish aggregating devices, which are known to attract high abundances of tuna. Shearwaters may to some extent be relying on memory to find prey in a seemingly unpredictable environment. This study has helped us gain valuable insight about the foraging ecology of Wedge-tailed Shearwaters in the western Indian Ocean. Together with similar studies determining the at-sea behaviour of seabirds, better informed recommendations can be made to marine spatial planners as to where much needed pelagic marine protection should be implemented to preserve marine life in this fascinating part of the global ocean.
- Full Text:
- Date Issued: 2018
- Authors: Keys, Danielle Zuanda
- Date: 2018
- Subjects: Birds of prey -- Behavior -- South Africa -- Western Cape , Animal behavior , Wildlife conservation
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/31251 , vital:31348
- Description: The distribution and abundance of prey largely influences how marine predators forage. Thus, understanding how marine predators respond to such changes becomes imperative when making decisions in marine spatial planning, especially in light of global climate change. Tropical marine systems are known for their relatively low productivity and high unpredictability of prey resources. Compared to higher latitudes, very few studies on seabirds have been implemented in the tropics. The Wedge-tailed Shearwater Ardenna pacifica is an Indo-Pacific tropical seabird with a wide distributional range. However, like many other seabirds, its population numbers are currently declining. Very little is known about the at-sea distribution of Wedge-tailed Shearwaters in the tropical western Indian Ocean. Therefore, this thesis investigates the foraging ecology of Wedge-tailed Shearwaters in the western Indian Ocean by tracking the fine scale movements of individuals at sea. This study was conducted in two different oceanic environments, namely D’Arros Island and Fouquet Island, St Joseph Atoll in the Amirantes Group in Seychelles archipelago as well as Réunion Island in the Mascarene archipelago during the Wedge-tailed Shearwaters breeding seasons. Here I aimed to investigate the foraging distribution of Wedge-tailed Shearwaters on Réunion Island in relation to different stages of the breeding period. I also compared the foraging ecology of all three populations, subjected to different abiotic and biotic factors. Furthermore, I investigated foraging site fidelity in individuals and repeatability within individual flight characteristics. To my knowledge, this is the first study to comprehensively investigate the foraging ecology of Wedge-tailed Shearwaters using global positioning system (GPS) loggers. This study demonstrated that the Wedge-tailed Shearwaters implement flexible foraging strategies throughout different stages of their breeding period and between different islands. In Réunion, during the shearwater breeding season, sexual segregation was prominent during early chick rearing and both sexes implemented dual foraging. As suggested by previous studies, it is likely that long trips were implemented for self-maintenance, whereas multiple short trips were implemented to meet the high energetic demands of the chicks. Several important foraging areas were identified for these Wedge-tailed Shearwaters. During incubation, shearwaters from Réunion faithfully foraged towards the south east of Madagascar near the East Madagascar Current and flew over large areas of the Mascarene Basin. During chick rearing, shearwaters significantly constricted their range closer to the colony and exploited deep waters on the south-west of Réunion Island. Shearwaters concentrated near oceanographic features such as the Pérouse Seamount (which is a known area of high productivity) as well as the Bourdonnais Ridge. There was no clear evidence for spatial or sexual segregation between individuals from the two study colonies in Seychelles during incubation and birds utilized a broader foraging range than birds from Réunion. This is likely to be the result of a large annual phytoplankton bloom which coincides with the shearwater breeding season in Seychelles, providing many foraging opportunities within the Seychelles Basin. The shearwaters from Seychelles exploited the Amirante Basin, East Somali Basin, and parts of the Seychelles archipelago. Shearwaters from D’Arros flew further east and foraged in the Mascarene Basin. Shearwaters from all populations foraged over deep, relatively unproductive waters with relatively high sea surface temperatures which are similar oceanographic features favoured by tuna. Foraging plasticity between individuals from different colonies was observed with varying flight bearings, flight durations and the maximum distances travelled from their respective colonies. Shearwaters displayed dissimilar levels of site fidelity, where shearwaters from Réunion faithfully foraged towards south east Madagascar, while shearwaters from Seychelles foraged over a wide range over the Seychelles Basin. Foraging effort for shearwaters from Fouquet was lower than shearwaters from Reunion and they spent less time at sea and foraged closer to their colony. These difference in behaviour responses between colonies may be advantageous to shearwaters, indicating that they may be able to respond to some level of environmental variability resulting from climate change and anthropogenic pressures. Lastly, during chick rearing, though shearwaters showed low levels of repeatability in flight characterising, foraging site fidelity was high amongst some of the individuals. Here we see that shearwaters continuously rely on permanent features, like seamounts and possibly fish aggregating devices, which are known to attract high abundances of tuna. Shearwaters may to some extent be relying on memory to find prey in a seemingly unpredictable environment. This study has helped us gain valuable insight about the foraging ecology of Wedge-tailed Shearwaters in the western Indian Ocean. Together with similar studies determining the at-sea behaviour of seabirds, better informed recommendations can be made to marine spatial planners as to where much needed pelagic marine protection should be implemented to preserve marine life in this fascinating part of the global ocean.
- Full Text:
- Date Issued: 2018
The foraging ecology of female Cape fur seals (Arctocephalus pusillus pusillus) in South Africa
- Botha, Jonathan Aubrey, Kirkman, Stephen, Lombard, Amanda
- Authors: Botha, Jonathan Aubrey , Kirkman, Stephen , Lombard, Amanda
- Date: 2022-04
- Subjects: Seals (Animals)--Habitat—Conservation , Marine ecology—South Africa
- Language: English
- Type: Doctoral theses , text
- Identifier: http://hdl.handle.net/10948/55965 , vital:54559
- Description: The marine environment is spatially and temporally dynamic and many marine ecosystems are experiencing impacts of broad-scale climate change. Within these ecosystems, marine predators play a crucial role in ecosystem function through their top-down influences on prey populations. These predators may also respond to bottom-up influences and changes at lower trophic levels. A thorough understanding of marine predator foraging ecology is thus important to improve our understanding of ecosystem function, inform conservation and management measures, and to predict the response of predators to future environmental change. The Cape fur seal (Arctocephalus pusillus pusillus) comprises a major proportion of the southern African marine predator biomass. However, little is known about the foraging distribution and behaviour of the species, despite its obvious importance within the ecosystem and increasing concerns regarding seal-fisheries conflict. Using a variety of technologies, including, GPS and satellite-linked tags, dive behaviour recorders, accelerometers and stable isotope analysis, this thesis investigated the foraging ecology of female Cape fur seals breeding on the coast of South Africa. First, to identify important foraging areas and assess the influence of geographic, temporal and environmental factors on these areas, lactating females from three breeding colonies were fitted with GPS or Argos-linked tracking devices, while individuals from two of these colonies were also fitted with dive behaviour recorders. Results revealed geographic differences in the foraging distributions and ranges of individuals between breeding colonies, which likely reflects a combined influence of ecological setting and density dependant competition. In addition, dive behaviour recorders revealed the occurrence of benthic foraging at both sites where they were deployed, and the dominance of this strategy in some individuals. , Thesis (PhD) -- Faculty of Science, School of Environmental Sciences, 2022
- Full Text:
- Date Issued: 2022-04
- Authors: Botha, Jonathan Aubrey , Kirkman, Stephen , Lombard, Amanda
- Date: 2022-04
- Subjects: Seals (Animals)--Habitat—Conservation , Marine ecology—South Africa
- Language: English
- Type: Doctoral theses , text
- Identifier: http://hdl.handle.net/10948/55965 , vital:54559
- Description: The marine environment is spatially and temporally dynamic and many marine ecosystems are experiencing impacts of broad-scale climate change. Within these ecosystems, marine predators play a crucial role in ecosystem function through their top-down influences on prey populations. These predators may also respond to bottom-up influences and changes at lower trophic levels. A thorough understanding of marine predator foraging ecology is thus important to improve our understanding of ecosystem function, inform conservation and management measures, and to predict the response of predators to future environmental change. The Cape fur seal (Arctocephalus pusillus pusillus) comprises a major proportion of the southern African marine predator biomass. However, little is known about the foraging distribution and behaviour of the species, despite its obvious importance within the ecosystem and increasing concerns regarding seal-fisheries conflict. Using a variety of technologies, including, GPS and satellite-linked tags, dive behaviour recorders, accelerometers and stable isotope analysis, this thesis investigated the foraging ecology of female Cape fur seals breeding on the coast of South Africa. First, to identify important foraging areas and assess the influence of geographic, temporal and environmental factors on these areas, lactating females from three breeding colonies were fitted with GPS or Argos-linked tracking devices, while individuals from two of these colonies were also fitted with dive behaviour recorders. Results revealed geographic differences in the foraging distributions and ranges of individuals between breeding colonies, which likely reflects a combined influence of ecological setting and density dependant competition. In addition, dive behaviour recorders revealed the occurrence of benthic foraging at both sites where they were deployed, and the dominance of this strategy in some individuals. , Thesis (PhD) -- Faculty of Science, School of Environmental Sciences, 2022
- Full Text:
- Date Issued: 2022-04
The fitting of statistical distributions to wind data in coastal areas of South Africa
- Authors: Moodley, Kirshnee
- Date: 2013
- Subjects: Winds -- South Africa -- Port Elizabeth -- Speed -- Measurement , Wind power -- South Africa -- Port Elizabeth , Winds -- South Africa -- Port Elizabeth -- Measurement -- Mathematical models
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10584
- Description: Coastal South African cities like Port Elizabeth are said to have a strong potential for wind energy. This study aims to model wind data in order to be able assess the power potential belonging to a given site. The main challenge in modelling wind direction data is that it is categorized as circular data and therefore requires special techniques for handling that are different from usual statistical samples. Statistical tools such as descriptive measures and distribution fitting, were re-invented for directional data by researchers in this field. The von Mises distribution is a predominant distribution in circular statistics and is commonly used to describe wind directions. In this study, the circular principles described by previous researchers were developed by using the statistical software, Mathematica. Graphical methods to present the wind data were developed to give an overview of the behaviour of the winds in any given area. Data collected at Coega, an area near Port Elizabeth, South Africa, was used to illustrate the models which were established in this study. Circular distributions were fit to the directional data in order to make appropriate conclusions about the prevailing wind directions in this area.
- Full Text:
- Date Issued: 2013
- Authors: Moodley, Kirshnee
- Date: 2013
- Subjects: Winds -- South Africa -- Port Elizabeth -- Speed -- Measurement , Wind power -- South Africa -- Port Elizabeth , Winds -- South Africa -- Port Elizabeth -- Measurement -- Mathematical models
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10584
- Description: Coastal South African cities like Port Elizabeth are said to have a strong potential for wind energy. This study aims to model wind data in order to be able assess the power potential belonging to a given site. The main challenge in modelling wind direction data is that it is categorized as circular data and therefore requires special techniques for handling that are different from usual statistical samples. Statistical tools such as descriptive measures and distribution fitting, were re-invented for directional data by researchers in this field. The von Mises distribution is a predominant distribution in circular statistics and is commonly used to describe wind directions. In this study, the circular principles described by previous researchers were developed by using the statistical software, Mathematica. Graphical methods to present the wind data were developed to give an overview of the behaviour of the winds in any given area. Data collected at Coega, an area near Port Elizabeth, South Africa, was used to illustrate the models which were established in this study. Circular distributions were fit to the directional data in order to make appropriate conclusions about the prevailing wind directions in this area.
- Full Text:
- Date Issued: 2013
The fitting of statistical distributions to wind data in coastal areas of South Africa
- Authors: Moodley, Kirshnee
- Date: 2012
- Subjects: Winds -- South Africa -- Port Elizabeth -- Speed -- Measurement , Wind power -- South Africa -- Port Elizabeth , Winds -- South Africa -- Port Elizabeth -- Measurement -- Mathematical models
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10579
- Description: Coastal South African cities like Port Elizabeth are said to have a strong potential for wind energy. This study aims to model wind data in order to be able assess the power potential belonging to a given site. The main challenge in modelling wind direction data is that it is categorized as circular data and therefore requires special techniques for handling that are different from usual statistical samples. Statistical tools such as descriptive measures and distribution fitting, were re-invented for directional data by researchers in this field. The von Mises distribution is a predominant distribution in circular statistics and is commonly used to describe wind directions. In this study, the circular principles described by previous researchers were developed by using the statistical software, Mathematica. Graphical methods to present the wind data were developed to give an overview of the behaviour of the winds in any given area. Data collected at Coega, an area near Port Elizabeth, South Africa, was used to illustrate the models which were established in this study. Circular distributions were fit to the directional data in order to make appropriate conclusions about the prevailing wind directions in this area.
- Full Text:
- Date Issued: 2012
- Authors: Moodley, Kirshnee
- Date: 2012
- Subjects: Winds -- South Africa -- Port Elizabeth -- Speed -- Measurement , Wind power -- South Africa -- Port Elizabeth , Winds -- South Africa -- Port Elizabeth -- Measurement -- Mathematical models
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10579
- Description: Coastal South African cities like Port Elizabeth are said to have a strong potential for wind energy. This study aims to model wind data in order to be able assess the power potential belonging to a given site. The main challenge in modelling wind direction data is that it is categorized as circular data and therefore requires special techniques for handling that are different from usual statistical samples. Statistical tools such as descriptive measures and distribution fitting, were re-invented for directional data by researchers in this field. The von Mises distribution is a predominant distribution in circular statistics and is commonly used to describe wind directions. In this study, the circular principles described by previous researchers were developed by using the statistical software, Mathematica. Graphical methods to present the wind data were developed to give an overview of the behaviour of the winds in any given area. Data collected at Coega, an area near Port Elizabeth, South Africa, was used to illustrate the models which were established in this study. Circular distributions were fit to the directional data in order to make appropriate conclusions about the prevailing wind directions in this area.
- Full Text:
- Date Issued: 2012
The feeding ecology of extralimital Nyala (Tragelaphus Angasii) in the Arid Mosaic thicket of the Southern Cape
- Authors: Pienaar, Ryno Cuyler
- Date: 2013
- Subjects: Nyala -- Feeding and feeds , Nyala -- Nutrition -- South Africa -- Southern Cape , Nyala -- Ecology -- South Africa -- Southern Cape , Animal-plant relationships -- South Africa -- Southern Cape
- Language: English
- Type: Thesis , Masters , MTech
- Identifier: vital:10757 , http://hdl.handle.net/10948/d1021012
- Description: The nyala on Buffelsdrift Private Game Reserve were found to be mainly browsers and made little use of grass during the study period. Browse contributed 87.8 percent to the annual diet, while grass contributed 12.2 percent. Only six species formed > 5 percent of the annual diet. Of these six only three species formed > 10 percent. They are the shrubs Acacia karroo, Pappea capensis and Grewia robusta. These were followed by the shrub Portulacaria afra, the dwarf shrub Zygophyllum lichtensteinianum and the grass Cynodon dactylon all contributing between 5 - 10 percent. There were definite seasonal dietary shifts with preference to different plant species. The shift takes place between the wet seasons (winter and spring) and the dry season (summer). Herbaceous species such as Cynodon dactylon and Erharta calycina were favoured in the winter/wet season. Shrubs such as P. capensis, P. afra and dwarf shrubs such as Limeum aethiopicum and Z. lichtensteinianum were favoured during the spring/wet and summer/dry seasons. Nyala habitat use in BPGR differed significantly from expected use when taking the relative area of habitats into consideration. However nyala did not display signififcantly different habitat preferences between seasons. Male and female nyala displayed differences in foraging behaviour at the plant form, plant species and habitat scale. Males preferred a greater proportion of shrubs and females a greater proportion of dwarf shrubs. Males preferred the shrubs Pappea capensis and Portulacaria afra the most and females preferred the dwarf shrubs Limeum aethiopicum and Zygophyllum lichtensteinianum the most. Plant species site availability varied significantly between the sexes, indicating that males and females selected different feeding paths. The difference in their feeding strategy appears to be related to the selection of plants that best satisfy the nutrient requirements of each sex. These findings are in agreement with the results from earlier studies on nyala sexual dimorphism. At the habitat scale females selected more for open dwarf shrubland and males more for densely vegetated habitats. This appears to be as a result of males attempting to maximize their foraging opportunities by selecting areas that offer food in greater quantities. Nyala in BPGR appear to co-exist with kudu and eland through spatial resource partitioning. This is suggested to be due to the influence of body size-gut size relationships on forage selectivity.
- Full Text:
- Date Issued: 2013
- Authors: Pienaar, Ryno Cuyler
- Date: 2013
- Subjects: Nyala -- Feeding and feeds , Nyala -- Nutrition -- South Africa -- Southern Cape , Nyala -- Ecology -- South Africa -- Southern Cape , Animal-plant relationships -- South Africa -- Southern Cape
- Language: English
- Type: Thesis , Masters , MTech
- Identifier: vital:10757 , http://hdl.handle.net/10948/d1021012
- Description: The nyala on Buffelsdrift Private Game Reserve were found to be mainly browsers and made little use of grass during the study period. Browse contributed 87.8 percent to the annual diet, while grass contributed 12.2 percent. Only six species formed > 5 percent of the annual diet. Of these six only three species formed > 10 percent. They are the shrubs Acacia karroo, Pappea capensis and Grewia robusta. These were followed by the shrub Portulacaria afra, the dwarf shrub Zygophyllum lichtensteinianum and the grass Cynodon dactylon all contributing between 5 - 10 percent. There were definite seasonal dietary shifts with preference to different plant species. The shift takes place between the wet seasons (winter and spring) and the dry season (summer). Herbaceous species such as Cynodon dactylon and Erharta calycina were favoured in the winter/wet season. Shrubs such as P. capensis, P. afra and dwarf shrubs such as Limeum aethiopicum and Z. lichtensteinianum were favoured during the spring/wet and summer/dry seasons. Nyala habitat use in BPGR differed significantly from expected use when taking the relative area of habitats into consideration. However nyala did not display signififcantly different habitat preferences between seasons. Male and female nyala displayed differences in foraging behaviour at the plant form, plant species and habitat scale. Males preferred a greater proportion of shrubs and females a greater proportion of dwarf shrubs. Males preferred the shrubs Pappea capensis and Portulacaria afra the most and females preferred the dwarf shrubs Limeum aethiopicum and Zygophyllum lichtensteinianum the most. Plant species site availability varied significantly between the sexes, indicating that males and females selected different feeding paths. The difference in their feeding strategy appears to be related to the selection of plants that best satisfy the nutrient requirements of each sex. These findings are in agreement with the results from earlier studies on nyala sexual dimorphism. At the habitat scale females selected more for open dwarf shrubland and males more for densely vegetated habitats. This appears to be as a result of males attempting to maximize their foraging opportunities by selecting areas that offer food in greater quantities. Nyala in BPGR appear to co-exist with kudu and eland through spatial resource partitioning. This is suggested to be due to the influence of body size-gut size relationships on forage selectivity.
- Full Text:
- Date Issued: 2013
The feeding ecology and habitat selection of small antelopes in the Overberg Renosterveld, Western Cape
- Authors: Jansen van Vuuren, Amauréé
- Date: 2021-04
- Subjects: Gqeberha (South Africa) , Eastern Cape (South Africa) , Fynbos ecology
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/52014 , vital:43436
- Description: Human impacts have altered natural ecosystems which required species to become resilient in order to survive the anthropogenic landscape. The study area is located in the highly fragmented Overberg area in the Western Cape of South Africa. The high degree of fragmentation of the area is as a result of the nutrient rich soils and favourable topography which makes the area highly suitable for agricultural practices. The agriculture practiced in the area is mainly grain crops and livestock farming and the remaining patches of natural vegetation consist of Fynbos and Renosterveld vegetation. The patches of Fynbos and Renosterveld vegetation acts as movement corridors to allow species movement through the anthropogenic landscape. The anthropogenic landscape requires species to be resilient and to adapt to a novel habitat which poses new threats as well as new resources. The aim of the study is to investigate the effect of landscape transformation, resulting from agricultural practices, on the feeding and behavioural dynamics of five small specialist browser species in a fragmented lowland Fynbos and Renosterveld system. The objectives were to determine the forage preferences of each of the five specialist browser species and to determine which site-specific characteristics, drive the seasonal habitat use of the five specialist browser species. The five specialist browser species were bushbuck (Tragelaphus sylvaticus), Cape grysbok (Rhaphicerus melanotis), common duiker (Sylvicapra grimmia), grey rhebok (Pelea capreolus) and steenbok (Rhaphicerus campestris). To determine the dietary selection of the five specialist browser species we collected dung samples and performed a histological analysis on the dung samples. To determine the habitat use of the five specialist browser species we used an occupancy analysis framework on camera trap data collected on each of the species. Some species appeared more dependent on the food resources from the anthropogenic landscape and spent more time in the crops but required close by cover of natural vegetation. Others appeared more dependent on the remaining pockets of natural vegetation for food resources and spent more time in the natural vegetation. These species would occasionally move into the crops to utilise the food resources. Both the anthropogenic as well as the natural landscape contributed to the diets of all of the species. These species have been resilient to changes in the landscape and appear to be benefiting from the resources presented in the novel landscape. , Thesis (MSc) -- Faculty of Science, School of Natural Resource Management, 2021
- Full Text: false
- Date Issued: 2021-04
- Authors: Jansen van Vuuren, Amauréé
- Date: 2021-04
- Subjects: Gqeberha (South Africa) , Eastern Cape (South Africa) , Fynbos ecology
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/52014 , vital:43436
- Description: Human impacts have altered natural ecosystems which required species to become resilient in order to survive the anthropogenic landscape. The study area is located in the highly fragmented Overberg area in the Western Cape of South Africa. The high degree of fragmentation of the area is as a result of the nutrient rich soils and favourable topography which makes the area highly suitable for agricultural practices. The agriculture practiced in the area is mainly grain crops and livestock farming and the remaining patches of natural vegetation consist of Fynbos and Renosterveld vegetation. The patches of Fynbos and Renosterveld vegetation acts as movement corridors to allow species movement through the anthropogenic landscape. The anthropogenic landscape requires species to be resilient and to adapt to a novel habitat which poses new threats as well as new resources. The aim of the study is to investigate the effect of landscape transformation, resulting from agricultural practices, on the feeding and behavioural dynamics of five small specialist browser species in a fragmented lowland Fynbos and Renosterveld system. The objectives were to determine the forage preferences of each of the five specialist browser species and to determine which site-specific characteristics, drive the seasonal habitat use of the five specialist browser species. The five specialist browser species were bushbuck (Tragelaphus sylvaticus), Cape grysbok (Rhaphicerus melanotis), common duiker (Sylvicapra grimmia), grey rhebok (Pelea capreolus) and steenbok (Rhaphicerus campestris). To determine the dietary selection of the five specialist browser species we collected dung samples and performed a histological analysis on the dung samples. To determine the habitat use of the five specialist browser species we used an occupancy analysis framework on camera trap data collected on each of the species. Some species appeared more dependent on the food resources from the anthropogenic landscape and spent more time in the crops but required close by cover of natural vegetation. Others appeared more dependent on the remaining pockets of natural vegetation for food resources and spent more time in the natural vegetation. These species would occasionally move into the crops to utilise the food resources. Both the anthropogenic as well as the natural landscape contributed to the diets of all of the species. These species have been resilient to changes in the landscape and appear to be benefiting from the resources presented in the novel landscape. , Thesis (MSc) -- Faculty of Science, School of Natural Resource Management, 2021
- Full Text: false
- Date Issued: 2021-04
The feasibility of artificial recharge of the Bushmans River Mouth Aquifer
- Authors: Nickall, Enéz Sarah-Leigh
- Date: 2008
- Subjects: Artificial groundwater recharge -- South Africa -- Bushmans River Estuary , Water conservation -- South Africa , Aquifer storage recovery -- South Africa -- Bushmans River Estuary
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10657 , http://hdl.handle.net/10948/704 , http://hdl.handle.net/10948/d1012886 , Artificial groundwater recharge -- South Africa -- Bushmans River Estuary , Water conservation -- South Africa , Aquifer storage recovery -- South Africa -- Bushmans River Estuary
- Description: The main aim of the project is to investigate the feasibility of artificial recharge of the Bushmans River Mouth Aquifer in the Eastern Cape. The suggested method of recharge is through natural infiltration through a series of wetlands in the back dune area. The proposed site was the Klipfontein Vlei which is located just north of the Bushmans River Mouth. Artificial recharge is defined as augmenting the natural movement of surface water into underground formations by some method of construction, the spreading of water, or by artificially changing natural conditions. A variety of methods have been developed, including water spreading, recharging through pits and wells, and pumping to induce recharge from surface water bodies. The choice of a specific method is controlled by local topography, geology and soil conditions, and the quantity of water to be recharged and ultimate water usage. In special circumstances, land value, water quality, and climate play an important role. Artificial recharge is not a foreign concept to South Africa and this project is to test its feasibility in a back dune wetland area. Augering done in the study area revealed the dominance of sandy loam in the upper layers of the pans, loamy sand in the middle levels and the presence of some sand lenses in the lower reaches. Particle size analysis done by sieving and hydrometer test, showed a dominant 3f fraction. There was variation in modes in pan 1 from unimodal to bimodal to trimodal. Pan 2 showed no variation as all samples were unimodal and moderately well sorted. Infiltration tests were done by a double ring infiltrometer. These results showed that the infiltration rates of the pans became stable after 15 to 20 minutes, thus indicating that the soil had reached its saturation point. The resistivity surveys revealed a stepped water table. The inclination of the water is controlled by the predominately argillaceous horizons of the Bokkeveld Group. Based on the above results, it is recommended that the Klipfontein Vlei be used as an artificial recharge site.
- Full Text:
- Date Issued: 2008
- Authors: Nickall, Enéz Sarah-Leigh
- Date: 2008
- Subjects: Artificial groundwater recharge -- South Africa -- Bushmans River Estuary , Water conservation -- South Africa , Aquifer storage recovery -- South Africa -- Bushmans River Estuary
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10657 , http://hdl.handle.net/10948/704 , http://hdl.handle.net/10948/d1012886 , Artificial groundwater recharge -- South Africa -- Bushmans River Estuary , Water conservation -- South Africa , Aquifer storage recovery -- South Africa -- Bushmans River Estuary
- Description: The main aim of the project is to investigate the feasibility of artificial recharge of the Bushmans River Mouth Aquifer in the Eastern Cape. The suggested method of recharge is through natural infiltration through a series of wetlands in the back dune area. The proposed site was the Klipfontein Vlei which is located just north of the Bushmans River Mouth. Artificial recharge is defined as augmenting the natural movement of surface water into underground formations by some method of construction, the spreading of water, or by artificially changing natural conditions. A variety of methods have been developed, including water spreading, recharging through pits and wells, and pumping to induce recharge from surface water bodies. The choice of a specific method is controlled by local topography, geology and soil conditions, and the quantity of water to be recharged and ultimate water usage. In special circumstances, land value, water quality, and climate play an important role. Artificial recharge is not a foreign concept to South Africa and this project is to test its feasibility in a back dune wetland area. Augering done in the study area revealed the dominance of sandy loam in the upper layers of the pans, loamy sand in the middle levels and the presence of some sand lenses in the lower reaches. Particle size analysis done by sieving and hydrometer test, showed a dominant 3f fraction. There was variation in modes in pan 1 from unimodal to bimodal to trimodal. Pan 2 showed no variation as all samples were unimodal and moderately well sorted. Infiltration tests were done by a double ring infiltrometer. These results showed that the infiltration rates of the pans became stable after 15 to 20 minutes, thus indicating that the soil had reached its saturation point. The resistivity surveys revealed a stepped water table. The inclination of the water is controlled by the predominately argillaceous horizons of the Bokkeveld Group. Based on the above results, it is recommended that the Klipfontein Vlei be used as an artificial recharge site.
- Full Text:
- Date Issued: 2008
The FAST fabric objective measurement properties of commercial worsted apparel fabrics available in South Africa
- Authors: Das, Sweta
- Date: 2018
- Subjects: Textile fabrics -- Testing , Textile fabrics -- Measurement , Textile fibers -- Testing , Textile design
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10948/17814 , vital:28458
- Description: In the last few decades, there has been a shift globally towards the objective measurement of these textile fibre, yarn and fabric properties which determine processing performance and product quality. This shift is also very apparent in the objective measurement of fabric properties, particularly those relating to handle and making-up into a garment. This study was motivated by the fact that the adoption of fabric objective measurement (FOM), specifically the FAST system, will benefit the South African worsted apparel sector, as it has done in various other countries which produce high quality worsted apparel fabrics and garments. FAST is robust and portable, yet inexpensive. The main objective of the study was to develop a FAST referencing system which can be used for benchmarking by the local apparel industry and, as a basis for encouraging and persuading the industry to adopt this system of fabric quality measurement and assurance and thereby improve their product quality and international competitiveness. To achieve the main objective, involved sourcing and FAST testing a representative cross-section of commercial worsted apparel fabrics with the emphasis on wool and wool blends from the local fabric and clothing manufacturing industry, and determining how the various FAST properties were affected by factors such as fabric weave, fibre blend and weight, since this could impact on the specific nature and validity of the referencing system. A total of some 394 worsted type commercial fabrics, mainly in wool and wool blends, were sourced from, and with the inputs of, local apparel fabric and clothing manufacturers so as to ensure the local fabric and garment representative of the sample population and after which the fabrics were tested on the FAST system. ANOVA (regression analysis) was carried out on each of the FAST parameters in order to determine whether fabric weight, weave, thickness and fibre composition (pure wool and wool blends) had a statistically significant effect on them, since this is an important aspect which needs to be clarified prior to the development of a envisaged meaningful FAST system.
- Full Text:
- Date Issued: 2018
- Authors: Das, Sweta
- Date: 2018
- Subjects: Textile fabrics -- Testing , Textile fabrics -- Measurement , Textile fibers -- Testing , Textile design
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10948/17814 , vital:28458
- Description: In the last few decades, there has been a shift globally towards the objective measurement of these textile fibre, yarn and fabric properties which determine processing performance and product quality. This shift is also very apparent in the objective measurement of fabric properties, particularly those relating to handle and making-up into a garment. This study was motivated by the fact that the adoption of fabric objective measurement (FOM), specifically the FAST system, will benefit the South African worsted apparel sector, as it has done in various other countries which produce high quality worsted apparel fabrics and garments. FAST is robust and portable, yet inexpensive. The main objective of the study was to develop a FAST referencing system which can be used for benchmarking by the local apparel industry and, as a basis for encouraging and persuading the industry to adopt this system of fabric quality measurement and assurance and thereby improve their product quality and international competitiveness. To achieve the main objective, involved sourcing and FAST testing a representative cross-section of commercial worsted apparel fabrics with the emphasis on wool and wool blends from the local fabric and clothing manufacturing industry, and determining how the various FAST properties were affected by factors such as fabric weave, fibre blend and weight, since this could impact on the specific nature and validity of the referencing system. A total of some 394 worsted type commercial fabrics, mainly in wool and wool blends, were sourced from, and with the inputs of, local apparel fabric and clothing manufacturers so as to ensure the local fabric and garment representative of the sample population and after which the fabrics were tested on the FAST system. ANOVA (regression analysis) was carried out on each of the FAST parameters in order to determine whether fabric weight, weave, thickness and fibre composition (pure wool and wool blends) had a statistically significant effect on them, since this is an important aspect which needs to be clarified prior to the development of a envisaged meaningful FAST system.
- Full Text:
- Date Issued: 2018
The extraction, quantification and application of high-value biological compounds from olive oil processing waste
- Authors: Postma-Botha, Marthie
- Date: 2018
- Subjects: Organic compounds , Biochemistry , Biomass energy , Olive oil industry
- Language: English
- Type: Thesis , Doctoral , DPhil
- Identifier: http://hdl.handle.net/10948/34383 , vital:33371
- Description: Olive oil processing waste (pomace) as a by-product of the olive oil industry is regarded as a rich source of high-value biological compounds exhibiting antioxidant potential. The objective of the present work was to obtain a concentrated extract of high-value biological antioxidants from the pomace. The effect of extraction conditions on the concentration of the bioactive compounds in the extracts was investigated. The simultaneous recovery of both hydrophilic and lipophilic high-value biological compounds exhibiting antioxidant potential was achieved through a one-step extraction method under reduced pressure using a non-toxic solvent blend. A multilevel experimental design was implemented with the aim of optimising the recovery of selected compounds, namely, hydroxytyrosol, tyrosol, oleuropein, α-tocopherol and squalene from olive pomace by using solvent blends of n-heptane, d-limonene, ethanol and water. The factors considered were: extraction time, percentage composition of solvent blends and extraction temperature. The results suggested that a good recovery of the hydrophilic polyphenolic compounds, namely, hydroxytyrosol, tyrosol and oleuropein, as well as the lipophilic compounds, α-tocopherol and squalene may be achieved at a solvent temperature of 60°C at 400 mbar with a solvent blend of 30% n-heptane, 50% ethanol and 20% water and an extraction time of two hours. It was found that freeze-drying the pomace before extraction minimised production of artefacts, avoided degradation of biophenols, ensured long term stability of a reproducible sample and achieved better recovery of important hydrophilic and lipophilic bioactive compounds. Since the bioactive compounds are temperature sensitive, the extraction was performed under reduced pressure in order to reduce solvent reflux temperature and to improve extraction efficiency. The quantitative and qualitative determinations of the aforementioned high-value compounds were performed by high-performance liquid chromatography (HPLC), which revealed that the hydrophilic polyphenolic as well as the lipophilic α-tocopherol and squalene were present. In this study hydroxytyrosol, tyrosol, oleuropein, α-tocopherol and squalene were extracted from the pomace of two olive cultivars (Frantoio and Coratina). A comparison among the two cultivars showed quantitative differences between the two cultivars in all five high-value biological compounds and in the antioxidant capacity of the extracts evaluated by measuring the radical scavenging effect on 1,1-diphenyl-2- picrylhydrazyl (DPPH) free radical. Coratina cultivar was found to have a significantly higher antioxidant capacity than Frantoio due to the much greater oleuropein content in the Coratina compared to the Frantoio although Frantoio had a significantly greater amount of hydroxytyrosol. The stability of olive waste extracts stored at four temperatures was also investigated and the results show that increased temperatures caused greater extent of degradation of both the hydrophilic polyphenolic and lipophilic compounds. The proposed optimum storage condition for the olive pomace extracts was found to be at 5°C in the absence of light. The extracts were incorporated into two cosmetic formulations and were found, from a stability study, to be stable at room temperature and optimally stable at 5°C in the absence of light.
- Full Text:
- Date Issued: 2018
- Authors: Postma-Botha, Marthie
- Date: 2018
- Subjects: Organic compounds , Biochemistry , Biomass energy , Olive oil industry
- Language: English
- Type: Thesis , Doctoral , DPhil
- Identifier: http://hdl.handle.net/10948/34383 , vital:33371
- Description: Olive oil processing waste (pomace) as a by-product of the olive oil industry is regarded as a rich source of high-value biological compounds exhibiting antioxidant potential. The objective of the present work was to obtain a concentrated extract of high-value biological antioxidants from the pomace. The effect of extraction conditions on the concentration of the bioactive compounds in the extracts was investigated. The simultaneous recovery of both hydrophilic and lipophilic high-value biological compounds exhibiting antioxidant potential was achieved through a one-step extraction method under reduced pressure using a non-toxic solvent blend. A multilevel experimental design was implemented with the aim of optimising the recovery of selected compounds, namely, hydroxytyrosol, tyrosol, oleuropein, α-tocopherol and squalene from olive pomace by using solvent blends of n-heptane, d-limonene, ethanol and water. The factors considered were: extraction time, percentage composition of solvent blends and extraction temperature. The results suggested that a good recovery of the hydrophilic polyphenolic compounds, namely, hydroxytyrosol, tyrosol and oleuropein, as well as the lipophilic compounds, α-tocopherol and squalene may be achieved at a solvent temperature of 60°C at 400 mbar with a solvent blend of 30% n-heptane, 50% ethanol and 20% water and an extraction time of two hours. It was found that freeze-drying the pomace before extraction minimised production of artefacts, avoided degradation of biophenols, ensured long term stability of a reproducible sample and achieved better recovery of important hydrophilic and lipophilic bioactive compounds. Since the bioactive compounds are temperature sensitive, the extraction was performed under reduced pressure in order to reduce solvent reflux temperature and to improve extraction efficiency. The quantitative and qualitative determinations of the aforementioned high-value compounds were performed by high-performance liquid chromatography (HPLC), which revealed that the hydrophilic polyphenolic as well as the lipophilic α-tocopherol and squalene were present. In this study hydroxytyrosol, tyrosol, oleuropein, α-tocopherol and squalene were extracted from the pomace of two olive cultivars (Frantoio and Coratina). A comparison among the two cultivars showed quantitative differences between the two cultivars in all five high-value biological compounds and in the antioxidant capacity of the extracts evaluated by measuring the radical scavenging effect on 1,1-diphenyl-2- picrylhydrazyl (DPPH) free radical. Coratina cultivar was found to have a significantly higher antioxidant capacity than Frantoio due to the much greater oleuropein content in the Coratina compared to the Frantoio although Frantoio had a significantly greater amount of hydroxytyrosol. The stability of olive waste extracts stored at four temperatures was also investigated and the results show that increased temperatures caused greater extent of degradation of both the hydrophilic polyphenolic and lipophilic compounds. The proposed optimum storage condition for the olive pomace extracts was found to be at 5°C in the absence of light. The extracts were incorporated into two cosmetic formulations and were found, from a stability study, to be stable at room temperature and optimally stable at 5°C in the absence of light.
- Full Text:
- Date Issued: 2018
The extraction of bioactive compounds from spent coffee grounds and their application in a cosmetic formulation
- Authors: Mdubeki, Ntokozo
- Date: 2019
- Subjects: Bioactive compounds , Plants -- bioactive compounds Plant biotechnology Coffee -- Processing Chemistry, Technical Cosmetics
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/41460 , vital:36485
- Description: Residues obtained during coffee processing, known as spent coffee grounds, are an abundant, low-cost and versatile feedstock for a wide range of high-value biological compounds exhibiting a number of properties which include anti-cellulite and antioxidant properties for skin-care applications. The objective of the present work was to obtain a concentrated extract containing high-value biological methylxanthines and polyphenolic compounds with antioxidant activity from the spent coffee grounds. An investigation of the effect of extraction conditions on the concentration of the bioactive compounds in the extract was done. The recovery of both methylxanthines and the polyphenolic compounds with antioxidant activity was achieved through a one-step extraction method under reduced pressure using a non-toxic solvent blend. Various experimental designs were implemented with the aim of optimising the recovery of the selected bioactive compounds, namely, caffeine, theophylline and theobromine from spent coffee grounds by using solvent blends of water and ethanol. A number of factors considered were: (i) repeatability, (ii) extraction time, (iii) composition of solvent blends, (iv) extraction vacuum (pressure)/temperature settings and (v) operating variables. The results suggested that an optimal recovery of the bioactive compounds will be obtained at a two-hour extraction time with a solvent blend of 100% water to maximise caffeine, theophylline, total phenolic content and percentage antioxidant activity, while extraction of theobromine is optimal using aqueous ethanolic solvent mixtures. The optimal vacuum (pressure) setting was found to be 250 mbar to maximise percentage antioxidant activity. The methylxanthines and total phenolic content were not affected by the vacuum (pressure) and temperature settings. Freezedrying the spent coffee grounds before extraction ensured long-term stability of a reproducible sample and achieved better recovery of the important bioactive compounds. Extraction was performed under reduced pressure in order to reduce solvent reflux temperature and to improve extraction efficiency. The quantitative and qualitative determinations of the above-mentioned high-value compounds were performed by high-performance liquid chromatography (HPLC), which confirmed the presence of the methylxanthines in the extracts. In the extraction of methylxanthines, it was found that caffeine was more abundant in the extract as compared to theophylline and theobromine. The extracts were incorporated into three cosmetic gel formulations. Release studies of caffeine, theobromine and theophylline were performed using the three formulated cosmetic gels with the use of a Franz diffusion cell. It was found that theobromine and theophylline were not detected from the gel samples as they were present in too small amounts in the original extracts and there was no significant difference in the release rates of caffeine when comparing the three different gels. Caffeine was released within 15 minutes. All three gels displayed a pseudoplastic viscosity profile and the different viscosity values of the three gels did not influence the release of caffeine significantly.
- Full Text:
- Date Issued: 2019
- Authors: Mdubeki, Ntokozo
- Date: 2019
- Subjects: Bioactive compounds , Plants -- bioactive compounds Plant biotechnology Coffee -- Processing Chemistry, Technical Cosmetics
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/41460 , vital:36485
- Description: Residues obtained during coffee processing, known as spent coffee grounds, are an abundant, low-cost and versatile feedstock for a wide range of high-value biological compounds exhibiting a number of properties which include anti-cellulite and antioxidant properties for skin-care applications. The objective of the present work was to obtain a concentrated extract containing high-value biological methylxanthines and polyphenolic compounds with antioxidant activity from the spent coffee grounds. An investigation of the effect of extraction conditions on the concentration of the bioactive compounds in the extract was done. The recovery of both methylxanthines and the polyphenolic compounds with antioxidant activity was achieved through a one-step extraction method under reduced pressure using a non-toxic solvent blend. Various experimental designs were implemented with the aim of optimising the recovery of the selected bioactive compounds, namely, caffeine, theophylline and theobromine from spent coffee grounds by using solvent blends of water and ethanol. A number of factors considered were: (i) repeatability, (ii) extraction time, (iii) composition of solvent blends, (iv) extraction vacuum (pressure)/temperature settings and (v) operating variables. The results suggested that an optimal recovery of the bioactive compounds will be obtained at a two-hour extraction time with a solvent blend of 100% water to maximise caffeine, theophylline, total phenolic content and percentage antioxidant activity, while extraction of theobromine is optimal using aqueous ethanolic solvent mixtures. The optimal vacuum (pressure) setting was found to be 250 mbar to maximise percentage antioxidant activity. The methylxanthines and total phenolic content were not affected by the vacuum (pressure) and temperature settings. Freezedrying the spent coffee grounds before extraction ensured long-term stability of a reproducible sample and achieved better recovery of the important bioactive compounds. Extraction was performed under reduced pressure in order to reduce solvent reflux temperature and to improve extraction efficiency. The quantitative and qualitative determinations of the above-mentioned high-value compounds were performed by high-performance liquid chromatography (HPLC), which confirmed the presence of the methylxanthines in the extracts. In the extraction of methylxanthines, it was found that caffeine was more abundant in the extract as compared to theophylline and theobromine. The extracts were incorporated into three cosmetic gel formulations. Release studies of caffeine, theobromine and theophylline were performed using the three formulated cosmetic gels with the use of a Franz diffusion cell. It was found that theobromine and theophylline were not detected from the gel samples as they were present in too small amounts in the original extracts and there was no significant difference in the release rates of caffeine when comparing the three different gels. Caffeine was released within 15 minutes. All three gels displayed a pseudoplastic viscosity profile and the different viscosity values of the three gels did not influence the release of caffeine significantly.
- Full Text:
- Date Issued: 2019
The evolution of the Lepilemuridae-Cheirogaleidae clade
- Authors: Andrews, Curswan Allan
- Date: 2019
- Subjects: Lemurs
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10948/40216 , vital:35989
- Description: The Lepilemuridae and the Cheirogaleidae, according to recent molecular reconstructions, share a more recent common ancestor than previously thought. Further phylogenetic reconstructions have indicated that body size evolution in this clade was marked by repeated dwarfing events that coincided with changes in the environment. I aimed to investigate the morphological implications of changes in body size within the Lepilemur-cheirogaleid clade, testing four predictions. Together with Dr. Couette, I collected data on the overall palate shape and predicted that shape is likely to be influenced by several factors including phylogeny, body size and diet. Geometric morphometric analyses revealed that, although a strong phylogenetic signal was detected, diet had the major effect on palate shape. In a similar vein, when examining the arterial circulation patterns in these taxa, I predicted that changes in body size would result in changes and possible reductions in arterial size, particularly the internal carotid artery (ICA) and stapedial artery (SA). Analyses with micro-computed tomography (CT) and 3D imaging indicated that changes in body size led to reduction of a functional stapedial artery in Lepilemur, making it an intermediate stage between the daubentoniid, lemurid and indriid species with large stapedial arteries, and the smaller bodied cheirogaleids with an alternative blood supply in the form of an enlarged ascending pharyngeal artery. Lepilemur is the smallest living folivorous primate, and likely to be at the threshold body size to be able to subsist on such a poor diet. To investigate shifts in dietary patterns that accompanied changes in body size, I chose to explore the reported behaviour of caecotrophy as a possible means for the sportive lemurs to derive additional nutrient from their food sources. I predicted that, if caecotrophy is a way to assist folivory at small body size, the energy contained in “caecotrophic” and latrine faecal samples should be different. Analyses showed significant iv differences between the two types of faeces and, combined with an analysis of faecal bacterial diversity, support the occurrence of caecotrophy. Finally, I compared the digestive efficiency of two small, distantly related gummivorous primates that evolved their diets convergently. I studied the digestion of gum in Microcebus griseorufus and compared this with gum digestion in Galago moholi. I predicted that an evolutionary disposition to fermentation inherited from a folivorous ancestor would aid in the digestion of gum in mouse lemurs. Results indicated that retention time was prolonged by the presence of secondary compounds in Microcebus fed with Commiphora gum but relatively shorter (< 24 hrs) when fed Alantsilodenron gum, a preferred food. Despite the fact that G. moholi has an ansa coli, which is missing in M. griseorufus species, both are highly efficient at digesting gum. These data provide some of the first indicators of how dietary changes from a larger-bodied folivorous ancestor to partially gummivorous, small-bodied descendants may have occurred in evolutionary time.
- Full Text:
- Date Issued: 2019
- Authors: Andrews, Curswan Allan
- Date: 2019
- Subjects: Lemurs
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10948/40216 , vital:35989
- Description: The Lepilemuridae and the Cheirogaleidae, according to recent molecular reconstructions, share a more recent common ancestor than previously thought. Further phylogenetic reconstructions have indicated that body size evolution in this clade was marked by repeated dwarfing events that coincided with changes in the environment. I aimed to investigate the morphological implications of changes in body size within the Lepilemur-cheirogaleid clade, testing four predictions. Together with Dr. Couette, I collected data on the overall palate shape and predicted that shape is likely to be influenced by several factors including phylogeny, body size and diet. Geometric morphometric analyses revealed that, although a strong phylogenetic signal was detected, diet had the major effect on palate shape. In a similar vein, when examining the arterial circulation patterns in these taxa, I predicted that changes in body size would result in changes and possible reductions in arterial size, particularly the internal carotid artery (ICA) and stapedial artery (SA). Analyses with micro-computed tomography (CT) and 3D imaging indicated that changes in body size led to reduction of a functional stapedial artery in Lepilemur, making it an intermediate stage between the daubentoniid, lemurid and indriid species with large stapedial arteries, and the smaller bodied cheirogaleids with an alternative blood supply in the form of an enlarged ascending pharyngeal artery. Lepilemur is the smallest living folivorous primate, and likely to be at the threshold body size to be able to subsist on such a poor diet. To investigate shifts in dietary patterns that accompanied changes in body size, I chose to explore the reported behaviour of caecotrophy as a possible means for the sportive lemurs to derive additional nutrient from their food sources. I predicted that, if caecotrophy is a way to assist folivory at small body size, the energy contained in “caecotrophic” and latrine faecal samples should be different. Analyses showed significant iv differences between the two types of faeces and, combined with an analysis of faecal bacterial diversity, support the occurrence of caecotrophy. Finally, I compared the digestive efficiency of two small, distantly related gummivorous primates that evolved their diets convergently. I studied the digestion of gum in Microcebus griseorufus and compared this with gum digestion in Galago moholi. I predicted that an evolutionary disposition to fermentation inherited from a folivorous ancestor would aid in the digestion of gum in mouse lemurs. Results indicated that retention time was prolonged by the presence of secondary compounds in Microcebus fed with Commiphora gum but relatively shorter (< 24 hrs) when fed Alantsilodenron gum, a preferred food. Despite the fact that G. moholi has an ansa coli, which is missing in M. griseorufus species, both are highly efficient at digesting gum. These data provide some of the first indicators of how dietary changes from a larger-bodied folivorous ancestor to partially gummivorous, small-bodied descendants may have occurred in evolutionary time.
- Full Text:
- Date Issued: 2019