"Is more, less?" : insect-insect interactions in a biological control context using water hyacinth as a model
- Authors: Weyl, Philip Sebastian Richard
- Date: 2012
- Subjects: Water hyacinth -- South Africa -- Eastern Cape , Water hyacinth -- Biological control -- South Africa -- Eastern Cape , Insects as biological pest control agents , Miridae -- South Africa -- Eastern Cape , Beetles -- South Africa -- Eastern Cape , Competition (Biology)
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5724 , http://hdl.handle.net/10962/d1005410 , Water hyacinth -- South Africa -- Eastern Cape , Water hyacinth -- Biological control -- South Africa -- Eastern Cape , Insects as biological pest control agents , Miridae -- South Africa -- Eastern Cape , Beetles -- South Africa -- Eastern Cape , Competition (Biology)
- Description: Interactions between insects have been shown to be important regulators of population abundances and dynamics as well as drivers of spatial segregation and distribution. These are important aspects of the ecology of insects used in biological control and may have implications for the overall success of a particular programme. In the history of biological control there has been a tendency to release a suite of agents against a weed, which in some cases has increased the level of success, while in others little change has been observed. In most of these cases the implications of increasing the level of complexity of the system is not taken into account and there is little research on the effect of releasing another agent into the system. A brief meta-analysis was done on all the biological control programmes initiated in South Africa. Emphasis was placed on multi-species releases and the effects that overlapping niches were having on the number of agents responsible for the success of a programme. Where overlapping niches were present among agents released the number of agents responsible for success was lower than the number established. Water hyacinth, Eichhornia crassipes (Martius) Solms-Laubach in South Africa has more arthropod agents released against it than anywhere else in the world, yet control has been variable. If the biology and host utilisation of all the agents against water hyacinth is considered, a definite overlap of niches is apparent in at least one life stage of all the agents. Therefore the probability of these insects interacting is high, especially if they are established at the same site in the field. Three of the insects released in South Africa have been selected to investigate possible interactions. They are Neochetina eichhorniae Warner, Neochetina bruchi Hustache and Eccritotarsus catarinensis (Carvalho). Y-tube olfactometer bioassays were used to measure responses of these insects to water hyacinth with prior feeding damage by either conspecifics or heterospecifics. This was done to determine whether olfactory cues played a role in host acceptability and avoidance of conspecifics or heterospecifics. The insects were given a choice between damaged and undamaged plants in various combinations. There was a significant preference for the undamaged plants when given a choice between undamaged and damaged plants. However when the insects were given a choice between two damaged plants there was no discrimination between heterospecific or conspecific damaged plants. This may indicate that there is little or no ecological cost for the insect to share a plant with other insects utilising a similar resource. Insect – insect interactions were investigated in a common garden plot experiment to measure the impact that pairwise combinations of the insect may have on their performance. There was a significant interaction between the mirid E. catarinensis and the weevil N. eichhorniae, with the weevil not performing as well when in combination with the mirid than when alone. Interestingly there was a negative interaction between the two weevil species when in combination, however it was impossible to determine which species was being affected if not both. None of the insects performed significantly better when in combination with another insect. A field study on Wriggleswade Dam in the Eastern Cape, South Africa was initiated to determine whether the relationship between the mirid E. catarinensis and the weevil N. eichhorniae could be determined in the field. The performance of the insects at the different sites in the field suggests that there was an interaction between the agents. This interaction did not limit the establishment of either insect at a site, but it did result in one insect dominating at a site over another. Interactions between the three species of insect tested in this thesis suggest that there are both negative and neutral relationships between them. A basic comparison between the insect performances from 15 sites around the country was done to determine if the spatial segregation observed in the field could be extrapolated to the natural South African situation. The interaction observed between N. eichhorniae and E. catarinensis does seem to extrapolate to the general South African situation where there is definite spatial segregation on a landscape level. The co–occurrence of the two Neochetina weevils at these sites suggests that the negative relationship observed between them in the common garden experiment does not extrapolate to the field. The results from this thesis suggest that the interactions between the agents tested would not limit establishment or have significant ramifications on performance. However, there may be spatial and temporal segregation of these species in the introduced range.
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- Date Issued: 2012
A case study of Bigodi Wetland Sanctuary as a community driven Community-Based Natural Resource Management initiative : maintaining livelihoods and wetland health
- Authors: Gosling, Amanda Karen
- Date: 2012
- Subjects: Wetland conservation -- Uganda , Wetland ecology -- Uganda , Natural resources management areas -- Uganda , Rural development -- Uganda
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4752 , http://hdl.handle.net/10962/d1007065 , Wetland conservation -- Uganda , Wetland ecology -- Uganda , Natural resources management areas -- Uganda , Rural development -- Uganda
- Description: Community-Based Natural Resource Management (CBNRM) is considered a win-win approach to reconcile conservation with natural resource use. CBNRM aims to accomplish conservation whilst prioritising development and contributing to poverty alleviation. This study analysed the different components of a CBNRM initiative, Bigodi Wetland Sanctuary (BWS), located in western Uganda. The study was carried out by interviewing the managing committee members (n= 8) as well as local households (n= 68) regarding the manner in which the project works, and the associated benefits and constraints. The main management issues recognised were a lack of monitoring and committee cohesiveness. The information gathered through the household survey enabled the calculation of the value of local livelihood options. This was done on the premise that conservation is better accepted when land users realise the economic value of natural resources. The average annual value of household livelihoods was represented by 30% crop production, 57% natural resource use, and 13% livestock. Lastly, wetland assessments were performed using the WET-Health and WET-EcoServices methodologies from the Wetland Management Series. These assessments indicated that the impacts of local livelihoods on the wetland were currently low but potential issues could arise with the increasing human population density. Ultimately, BWS presents both environmental and social costs and benefits. With a detailed and interdisciplinary method specific recommendations of improvement can be made to reduce such costs and further reconcile the conservation of Bigodi Wetland with local natural resource use..
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- Date Issued: 2012
An assessment of caracal population density and human-predator conflict in the Winterberg, Eastern Cape, South Africa
- Authors: Smith, Emma Ruth
- Date: 2012
- Subjects: Felis -- South Africa -- Eastern Cape , Felis -- Effect of human beings on -- South Africa -- Eastern Cape , Predatory animals -- Control -- South Africa -- Eastern Cape , Wildlife depredation -- South Africa -- Eastern Cape , Human-animal relationships , Felis -- Conservation -- South Africa -- Eastern Cape , Felis -- Monitoring -- South Africa -- Eastern Cape , Animal populations -- Estimates
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5644 , http://hdl.handle.net/10962/d1005326 , Felis -- South Africa -- Eastern Cape , Felis -- Effect of human beings on -- South Africa -- Eastern Cape , Predatory animals -- Control -- South Africa -- Eastern Cape , Wildlife depredation -- South Africa -- Eastern Cape , Human-animal relationships , Felis -- Conservation -- South Africa -- Eastern Cape , Felis -- Monitoring -- South Africa -- Eastern Cape , Animal populations -- Estimates
- Description: Human-wildlife conflict frequently involves carnivores, mainly because of their large home ranges and dietary requirements. As such, carnivores tend to be the first animals to be lost in human-dominated ecosystems. This is significant because the removal of carnivores can alter the functionality of ecosystems. However, the conservation of carnivores depends as much on the socio-political and socio-economic landscapes as it does on the ecological one. The consolidation of vast, un-fragmented conservation areas in Africa and the world is unlikely. Thus, unravelling the factors (both biological and sociological) responsible for and influencing human-predator conflict is critical for carnivore conservation. The Winterberg district in the Eastern Cape, South Africa has been a sheep (Ovis aries) farming stronghold for nearly 200 years. Consequently, conflict between farmers and predators is commonplace and depredation of livestock by caracals (Caracai caracal) remains a perennial problem. However, the extent of this human-predator conflict (including a reliable assessment of caracal density) has not been quantified. This study used camera trapping to estimate the density of caracals (a nonindividually recognisable species) in the Winterberg and a structured questionnaire to gauge the general attitudes of the farmers of the region. Caracal density was estimated to be 0.20 caracals/km². This estimate equates to a population of approximately 54 caracals across the entire district. Therefore, caracals do not appear to occur at high densities in the Winterberg. However, the survey of the residents of the Winterberg Conservancy revealed that predators were rated as the greatest problem faced by farmers in the area. Although not significant, it also showed that the size of a respondent's property and sheep mortality due to caracals had the greatest probability of affecting attitudes towards predators. The farmers lost less than 10% of their stock to caracal depredation on an annual basis. Therefore, the general perception that predators were the most important factor in stock loss in the area does not appear to be fully supported by my data. The Winterberg is a male-dominated, multigenerational society and it is likely this propagates certain perceptions towards predators which are a reflection of long-held family traditions and beliefs. Such situations can result in reactions which are disproportionate to the actual scale of the problem. However, my study was limited to a sub-set of the landowners in the Winterberg. Thus, more intensive assessments of caracal space use and community attitudes towards predators are recommended.
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- Date Issued: 2012
Assessing linkages between local ecological knowledge, HIV/AIDS and the commercialisation of natural resources across Southern Africa
- Authors: Weyer, Dylan James
- Date: 2012
- Subjects: AIDS (Disease) -- Africa, Southern , HIV infections -- Africa, Southern , Natural resources -- Management -- Africa, Southern , Traditional ecological knowledge -- Africa, Southern , Households -- Economic aspects -- Africa, Southern , Poverty -- Environmental aspects -- Africa, Southern , Ecology -- Economic aspects -- Africa, Southern
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4769 , http://hdl.handle.net/10962/d1007180 , AIDS (Disease) -- Africa, Southern , HIV infections -- Africa, Southern , Natural resources -- Management -- Africa, Southern , Traditional ecological knowledge -- Africa, Southern , Households -- Economic aspects -- Africa, Southern , Poverty -- Environmental aspects -- Africa, Southern , Ecology -- Economic aspects -- Africa, Southern
- Description: That natural resources (NRs) are important to those experiencing adversity, and, especially, vulnerability associated with HIV/AIDS, is well documented, particularly with respect to food and energy security. What is unclear is where HIV/AIDS ranks in terms of its significance in comparison to other household shocks, the role local ecological knowledge may (LEK) play in households' response to shock, a propos the types of coping strategies that are employed. Consequently, this research aims to bridge the knowledge gap between HIV/AIDS and the degree to which it is contributing to the expansion of NR commercialisation and to explore the unknowns surrounding the influence of LEK on people's choice of coping strategy. A two phase study was designed to provide quantitative rigour with qualitative depth. Phase one was an extensive, rapid survey of NR traders within urban and rural settings in five southern Africa countries. The principle objective was to profile the trade, the livelihoods of those involved and their reasons for entering the trade, to ultimately establish to what degree HIV/AIDS may have been a catalyst for this. Almost one third of the sample entered the trade in response to illness and/or death in their households, with 80% of deaths being of breadwinners. The findings illustrated considerable dependence on the sale of NRs; for almost 60% of the sample it was their household's only source of income. There was evidently increased blurring of the lines between rural and urban NR use with a greater diversity of products being traded in urban areas. Phase two involved in-depth interviews and work with a smaller sample at two sites selected based on the findings from the first phase. It incorporated three groups of households; non-trading, inexperienced trading and experienced trading households. Key areas of focus were household shocks, coping strategies employed in response to these and the role LEK may be playing in the choice of coping strategies. Within a two year period, 95% of households registered at least one shock, of which 80% recorded AIDS-related proxy shocks. Non-trading households were significantly worse-off in this regard, while in the case of non-AIDS proxy shocks, there was no such difference between groups. The most frequently employed coping strategy was the consumption and sale of NRs and was of particular importance when households were faced with AIDS proxy shocks. Trading households emerged as having superior levels of LEK in comparison to non-trading households, even for non-traded NRs, suggesting that prior LEK of NRs opened up opportunities to trade in NR as a coping strategy. Further inspection of the latter group however revealed that the portion of non-trading households who traded on a very ad hoc basis actually had comparable levels of LEK to the trading households. Despite the ad hoc trading households' vulnerable state and their disproportionately high level of AIDS proxy measures, they had at their disposal, sufficient LEK to unlock certain key coping strategies, namely the NR trade. In this sense there are apparent linkages between LEK, HIV/AIDS and the expansion of the commercialisation of NRs.
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- Date Issued: 2012
Contribution towards the development of a management plan for the baitboat and sport fishery for tuna in South Africa
- Authors: Newcombe, Hylton Cecil
- Date: 2012
- Subjects: Tuna -- South Africa , Tuna fishing -- South Africa , Fishery management -- South Africa , Fishery management -- Economic aspects -- South Africa , Tuna fisheries -- Catch effort -- South Africa , Tuna fisheries -- Economic aspects -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5249 , http://hdl.handle.net/10962/d1005092 , Tuna -- South Africa , Tuna fishing -- South Africa , Fishery management -- South Africa , Fishery management -- Economic aspects -- South Africa , Tuna fisheries -- Catch effort -- South Africa , Tuna fisheries -- Economic aspects -- South Africa
- Description: Tuna are of significant global economic importance and a prime food source. Increased levels of fishing have resulted in many stocks being under threat and a number of species are considered to be overfished. The South African tuna industry has had limited management attention from the South African fisheries management agency. A recent development has been an increase in the number of tuna caught by small vessels that target the fresh tuna market in South Africa and overseas. This has highlighted the importance of developing a holistic management plan for the sector and creating an awareness, among vessel owners, of the importance of compliance with initiatives such as the Marine Stewardship Council (MSC). The South African tuna fishery comprises three sectors: baitboat, sport and longline, all of which are currently in need of acquiring more biological and fisheries data. This project was initiated to collate existing information and to collect additional information where possible. This encompassed a qualitative and quantitative assessment of the size and shape of the tuna fishing industry, which included estimates of total catch, effort, catch-per-unit-of-effort (CPUE) and stock structure (obtained through comparative estimates of age and growth), as well as socio-economic and economic information. A technique involving an examination of specific vertebrae was used to obtain age-growth information for T. albacares. These data were used to estimate von Bertalanffy (VBGF) growth parameters: F 2 1. , k 0.1 , and t₀ -0. 1 year. No significant differences in growth parameters were found in yellowfin tuna (Thunnus albacares) from different localities around the South African coast, i.e. from the south eastern Atlantic and the south western Indian Ocean. In addition, growth did not differ between South Africa and other regions (Draganic and Pelzcarski 1984, Fonteneau 1980, Gascuel et al. 1992, LeGuen and Sakagawa 1973, Lehodey and Leroy 1999, Lessa and Duarte-Neto 2004, Shuford et al. 2007, Stequert et al. 1996, Wild 1986, Yang et al. 1969). Further substantiation of the above-mentioned observations was found by recording differences in the sizes of fish caught in the inshore (baitboat and sport fishery vessels) and offshore (large pelagic longline vessels) sectors of South African tuna fisheries. A significant difference between the regions — in terms of the size of fish caught inshore — was noted, with mostly-juvenile fish being caught in KwaZulu-Natal (5.4 ± 3.5kg), sub-adult fish in the Eastern Cape (26.2 ± 13.4kg), and adult fish in the Western Cape (42.3 ± 14.4kg). Since mostly-adult fish were caught offshore by longliners, with no significant differences between regions, it is however possible th at adult fish predominantly inhabit the offshore region. Yellowfin tuna caught by the large pelagic longline fishery in the three managerial zones (A, B and C) were predominantly adult fish of similar size, namely Zone A: 38.9 ± 6.9kg; Zone B: 28.7 ± 4.6kg, and Zone C: 36.0 ± 5.1kg. The recreational ski boat sport fishery has remained stable, in terms of participation, consisting mostly of white middle aged males in the top 25% of household income distribution, having either permanent occupational status or being retired. Fishers within this sector are willing to incur great expense to partake in the fishery and they provide an important economic contribution to coastal towns, particularly in the Eastern Cape. The total catch (of 83t) of yellowfin tuna by the competitive sport fishery within the Western and Eastern Cape regions was considerably lower than that of commercial tuna baitboat catches, which amounted to 186t, and the large pelagic longline sector that caught t in 200. It is however likely that the competitive sport fishery's total yellowfin tuna catch (of 83t in 2009) of the Eastern and Western Cape competitive sport fishery was considerably less than the total yellowfin tuna catches of the whole South African deep-sea sport fishery. Longfin tuna are the primary target species of South Africa‘s baitboat fisheries, comprising an average of 86% of the total catch and generating ZAR49 million in employment income in 2002. South Africa was responsible for 20% of the total longfin tuna annual yield in 2004 in the southern Atlantic Ocean, behind Taiwan with 59%. However, yellowfin tuna only contributes a small percentage towards total catches (8.4 ± 8.2% between 1995 and 2009), generating ZAR1.3 million in employment income in 2002. Of the four vessel categories comprising the tuna baitboat fishery, ski boats had the highest yellowfin tuna CPUE in 2009 (117 ± 62 kg.vessel⁻¹.day⁻¹) and the lowest effort. The ski boats sector is the most opportunistic fishery as they are only active when either longfin or yellowfin tuna are in high abundance. At such times catches are guaranteed, so can be expected to offset expenses. In 2009 the CPUE for yellowfin tuna for 15–19m vessels and freezer deckboats was 12 ± 20kg.vessel⁻¹.day⁻¹ and 3 ± 6kg.vessel⁻¹.day⁻¹, respectively. These vessels specifically target longfin tuna when they are in abundance. Since the start of the tuna baitboat fishery in 1995, there has been a substantial increase in the number of new entrants. In 2002 this sector had a fleet size of 82 vessels with a capital value of ZAR163 million and a total employment income of ZAR58 million, employing 2 173 fishers, of which 87% were black African. The commercial tuna baitboat fleet has subsequently grown to 200 vessels and 3600 crew, with 110 active vessels fishing for a combined fleet average of 46 days per year. There are a high number of owner-operated vessels. Since 2007 the fishery's profit to cost ratio has been low due to the low abundance of tuna stocks off the coast of South Africa, which has resulted in poor catch returns, placing economic pressure on the fishery. The baitboat industry is a low-profit-margin fishery with a total net catch value worth ZAR90 million in 2009 (Feike 2010). The abundance of yellowfin tuna influences profit margins, with very high profits being made when abundance and catches are high. The large pelagic longline fishery has a total allowable effort of 43 vessels of which only 30 vessels fished during 2009, when a reported 766t of yellowfin tuna were caught, representing a total tonnage far in excess of that obtained by the combined effort of the baitboat and sport fishery. It is, however, assumed that considerable underreporting of catches takes place within this fishery, which means that the estimated total net catch value of ZAR100 million could, in fact, be much higher. Such underreporting of catches is of great concern for this fishery, as is the high bycatch of Chondricthians spp. that significantly outweighs imposed regulatory limits (DEAT 2007). The present study demonstrates the current lack of comprehensive catch and effort data for the sport, baitboat and longline fisheries as well as the serious limitations and flaws associated with current databases. Results from the present study have drawn attention to a number of high-priority research needs, as outlined below. (1) A major lack of comprehensive catch and effort data for the sport fishery, which can be rectified by focussing on obtaining more competition data, as well as high-quality catch and effort and socio-economic information, as opposed to relying on information from non-club anglers (Gartside et al. 1999, Williams 2003, Cass-Calay 2008). Acquisition of such data is relatively inexpensive: the location of organized clubs and their frequent competition meetings provide widespread coverage along the Southern African coastline. Such data acquisition efforts have the potential to provide reliable information on spatial catch trends. (2) Validation of vessel catch return data is required for commercial fisheries and on some recent data that has emerged from studies of catch rates and trends for target species, particularly in the longline fishery. In this context it should be noted that the most recent peer-reviewed publications on this exploratory fishery were published more than a decade ago (Kroese 1999, Penny and Griffiths 1999). Additional studies need to be undertaken and journal articles published on the current stock status of South African catches of yellowfin and bigeye tuna and swordfish.
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- Date Issued: 2012
Evaluation for harnessing low-enthalpy geothermal energy in South Africa based on a model pilot plant in the Limpopo Mobile Belt
- Authors: Dhansay, Taufeeq
- Date: 2012
- Subjects: Geothermal resources -- South Africa -- Limpopo , Renewable energy sources -- South Africa -- Limpopo , Climatic changes -- South Africa -- Limpopo
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10667 , http://hdl.handle.net/10948/d1019789
- Description: South Africa generates more than 90 percent of its total energy capacity through non-renewable sources. With coal forming the predominant energy source, South Africa became the leading carbon emissive nation in Africa, emitting 450 million tonnes of CO2 in 2011. In an international effort to restrict global average temperature rise to 2° C above the average prior the industrial revolution, the Kyoto Protocol has been extended for another 8-year commitment period. This is complementary to an expected resolution of a new legally binding climate change policy in 2015. This policy will aim to introduce financial penalties for nations failing to meet ascribed GHG emission targets by 2020. In an attempt to meet these climate change resolutions South Africa will research and develop cleaner, alternative forms of energy, including hydro, wind, and biomass forms of renewable energy, in addition to designating stringent building regulations for the Incorporation of solar energy. These measures form part of an Integrated evelopment Plan that aims to generate a target of 10,000 GWh of renewable energy in 2013. South Africa is also investigating the possibilities of extracting its shale gas reserves and implementing it as a major energy source. This energy mix has given little attention to geothermal energy. The reasons for this omission appears to be the lack of active volcanism and previous research that suggests South Africa, largely underlain by the Kaapvaal Craton, has a relatively low heat Flow profile, deemed insufficient for harnessing geothermal energy.
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- Date Issued: 2012
Factors affecting survivorship of loggerhead (Caretta caretta) and leatherback (Dermochelys coriacea) sea turtles of South Africa
- Authors: De Wet, Anje
- Date: 2012
- Subjects: Loggerhead turtle -- South Africa , Leatherback turtle -- South Africa , Sea turtles -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10686 , http://hdl.handle.net/10948/d1007900 , Loggerhead turtle -- South Africa , Leatherback turtle -- South Africa , Sea turtles -- South Africa
- Description: Loggerhead (Caretta caretta) and leatherback (Dermochelys coriacea) sea turtles as well as their eggs and hatchlings have been protected on their nesting beach in South Africa (SA) since 1963. Both nesting populations were expected to show similar trends in recovery following the application of identical protection and conservation measures. The loggerhead nesting population has responded favourably to these protection efforts. In contrast, the leatherback nesting population showed an initial increase but is currently stable. The reason for this difference in response is thought to be due to differential offshore mortality of these two species. This prompted an investigation into the different sources of sea turtle mortality in the South Western Indian Ocean (SWIO). Specific aims were to identify and quantify sources of loggerhead and leatherback mortality on nesting beaches as well as in the oceans. Reasonable survivorship at all age classes is important to ensure recruitment of new nesting individuals into sea turtle populations. Mortality of nests, eggs per nest and hatchlings were quantified over two seasons for the loggerheads and leatherbacks nesting in SA. The beach was patrolled on foot to encounter and record females emerging from the ocean and later, hatchlings from their nests. The nests were then monitored during the incubation period and excavated once hatched. The fates of 925 nests were determined during these two nesting seasons (2009/2010 and 2010/2011). The main source of loggerhead and leatherback nest destruction was predation (8.6 percent and 15.7 percent respectively) followed by nest erosion (2.2 percent and 6.3 percent respectively). Overall nest success was high but higher for loggerheads (89 percent) than for leatherbacks (78 percent). The main cause of egg mortality for both species was early developmental arrest, followed by predation by ants and ghost crabs. Hatchlings en route to the sea were almost exclusively predated by ghost crabs (4.2 percent of emerged loggerhead hatchlings and 3.2 percent of emerged leatherback hatchlings). It appears that both species benefit from the coastal conservation efforts. When sea turtles leave the nesting beach, either as hatchlings or adults, conservation and monitoring becomes more difficult and sea turtles are exposed to a multitude of threats, including anthropogenic threats. Age classes tend to be spatially separated due to different habitat and dietary requirements. The type of threat sea turtles are exposed to thus depends on the current age class. Offshore sources of mortality in the SWIO were identified and where possible loggerhead and leatherback mortality was quantified and mapped spatially. Loggerheads were mostly exposed to and had the highest mortality in the artisanal fisheries in the SWIO (> 1000 per annum), inshore trawling (ca. 41 per annum), shark nets (protective gill nets) (21.6 ± 6.7 per annum) and the pelagic longline fishery (5.0 ± 4.4 per annum). In contrast, leatherbacks with a pelagic lifestyle, were mostly exposed to pelagic longline fisheries (7.8 ± 7.8 per annum). A spatial analysis of fishing activities indicated that leatherback home ranges overlapped 41percent with pelagic longline fishing activity in the SA EEZ, whereas the overlap between pelagic longliners and loggerhead home ranges was 29 percent. The quantified sources of mortality provide some explanation for the trend in the loggerhead nesting population but not the trend in the leatherback nesting population. Hatchling survivorship to adulthood was estimated to determine the viability of the two nesting populations as well as to determine whether offshore mortality was responsible for the difference in recovery of the two populations. Loggerhead hatchling survivorship to adulthood was estimated at between 2 and 10 per 1000 hatchlings, the minimum requirement for an increasing population. The adopted sophisticated model shows that leatherbacks have a survival rate of 5 to 10 per 1 000 hatchlings. However, this suggests that the population is increasing, but the leatherback population is stable. Perhaps the age to maturity of SA leatherbacks is greater than 12 years, or fisheries-related mortality affects younger age classes than initially thought. It is therefore recommended that the turtle monitoring area is extended to include other potential nesting grounds. In addition, observer or monitoring programs for commercial as well as artisanal fisheries needs to be extended throughout the SWIO to quantify sea turtle mortality. Ultimately a comprehensive multi-regional approach is required for the conservation of these highly migratory species.
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- Date Issued: 2012
Feeding ecology and dietary patterns of the Indo-Pacific bottlenose dolphin (Tursiops Aduncus) off KwaZulu-Natal, South Africa
- Authors: Kaiser, Sabina Marie Luise
- Date: 2012
- Subjects: Bottlenose dolphin -- Ecology -- South Africa -- KwaZulu-Natal , Bottlenose dolphin -- Feeding and feeds -- South Africa -- KwaZulu-Natal
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10710 , http://hdl.handle.net/10948/d1011509 , Bottlenose dolphin -- Ecology -- South Africa -- KwaZulu-Natal , Bottlenose dolphin -- Feeding and feeds -- South Africa -- KwaZulu-Natal
- Description: The Indo-Pacific bottlenose dolphin (Tursiops aduncus) is a common top predator along the KwaZulu-Natal coast. There have been several dietary studies done on this species, most of which have classed this predator as an opportunistic feeder preying on the most abundant prey species in that area. In KwaZulu-Natal (KZN) a dietary study was carried out in 1990, but there have been no followup studies to examine potential changes in diet. A number of bottlenose dolphins get entangled in the shark-nets set off the KZN coast each year. These dolphins provide a valuable source of information about different aspects of the ecology of this population. The aim of this study was to examine the diet of bottlenose dolphins off the KwaZulu-Natal coast with particular emphasis on temporal change in diet composition. The contents of 102 stomachs of bottlenose dolphins (58 females, 44 males) accidentally caught in the shark nets between 1985 and 2010 were analysed, and compared to historical data from dolphins caught between 1975 and 1986. A total of 94 different prey species from 37 families (32 fish families, five cephalopod families) were identified in the stomach contents. Teleosts made up the most important prey group in numbers and weight constituting 84 percent and 67 percent, respectively, while cephalopods made up 15 percent of the number and 30 percent of the weight of the prey items. Multi Dimensional Scaling (MDS) indicated that there is no resource partitioning between males and females, but significant partitioning between juveniles and adults. Six prey species contributed more than 60 percent of the weight of all prey species in the diet. These species are the most important according to their calculated index of relative importance score and are, in order of importance: Sepia sp. (cuttlefish)., Pomadasys olivaceus (piggy), Trachurus delagoa (maasbanker), Scomber japonicus (mackeral), Loligo sp. (squid). and Pagellus bellottii natalensis (pandora or red tjor-tjor). When compared to historic data, no changes in the main prey species has occurred, but the piggy has decreased in importance (1976-1986 percent IRI=45; 2000-2010 percent IRI=22), while the maasbanker has increased (1975-1986, percent RI=4; 2000-2010 percent RI=20). Stable carbon and nitrogen isotope analysis performed on tissue from the teeth of T. aduncus caught in the shark nets between 1970 and 2010 showed that there has been no significant shift in trophic level (δ15N) or in primary prey source (δ13C) over this time. The isotopic signatures of different tissues from an individual were used to create a base line and describe the differences in tissue signatures. Blubber was found to be significantly different from skin and muscle, which were found to be isotopically similar. Skin from remote biopsies can therefore probably be used in place of muscle for isotopic studies of bottlenose dolphins, while caution should be taken when using blubber. Given that T. aduncus is still listed as “data deficient” by the International Union for the Conservation of Nature (IUCN), and the potential for climate change and expanding fisheries to alter the distribution and abundance of their prey species, long term dietary studies such as this are important in order for their effective conservation and management.
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- Date Issued: 2012
Genetic algorithm for Artificial Neural Network training for the purpose of Automated Part Recognition
- Authors: Buys, Stefan
- Date: 2012
- Subjects: Genetic algorithms , Software architecture
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:9648 , http://hdl.handle.net/10948/d1008356 , Genetic algorithms , Software architecture
- Description: Object or part recognition is of major interest in industrial environments. Current methods implement expensive camera based solutions. There is a need for a cost effective alternative to be developed. One of the proposed methods is to overcome the hardware, camera, problem by implementing a software solution. Artificial Neural Networks (ANN) are to be used as the underlying intelligent software as they have high tolerance for noise and have the ability to generalize. A colleague has implemented a basic ANN based system comprising of an ANN and three cost effective laser distance sensors. However, the system is only able to identify 3 different parts and needed hard coding changes made by trial and error. This is not practical for industrial use in a production environment where there are a large quantity of different parts to be identified that change relatively regularly. The ability to easily train more parts is required. Difficulties associated with traditional mathematically guided training methods are discussed, which leads to the development of a Genetic Algorithm (GA) based evolutionary training method that overcomes these difficulties and makes accurate part recognition possible. An ANN hybridised with GA training is introduced and a general solution encoding scheme which is used to encode the required ANN connection weights. Experimental tests were performed in order to determine the ideal GA performance and control parameters as studies have indicated that different GA control parameters can lead to large differences in training accuracy. After performing these tests, the training accuracy was analyzed by investigation into GA performance as well as hardware based part recognition performance. This analysis identified the ideal GA control parameters when training an ANN for the purpose of part recognition and showed that the ANN generally trained well and could generalize well on data not presented to it during training.
- Full Text:
- Date Issued: 2012
How does the ungulate community respond to predation risk from cheetah (Acinonyx jubatus) in Samara Private Game Reserve?
- Authors: Makin, Douglas Ferguson
- Date: 2012
- Subjects: Ungulates -- South Africa -- Eastern Cape , Predatory animals -- Ecology -- South Africa -- Eastern Cape , Predation (Biology) -- South Africa -- Eastern Cape
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10722 , http://hdl.handle.net/10948/d1018461
- Description: Predator reintroductions are becoming increasingly more common for multiple reasons, including assisting with the conservation of a predator species, the restoration of ecosystem functions and the economic benefits of their reintroduction for ecotourism ventures. There remains however, little knowledge on prey species responses to these predator reintroductions. As such, the reintroduction of cheetah (Acinonyx jubatus) into Samara Private Game Reserve provided an opportunity to investigate prey responses to predator reintroduction across a range of spatial and temporal scales. More specifically, the aim of this study was to investigate the effect of cheetah predation risk on habitat use and behavioural responses of the resident ungulate community. Samara is divided into “predator present” and “predator absent” sections, providing the opportunity to conduct a comparative study investigating the effect of cheetah on prey responses. It was hypothesized that different ungulate species would respond differently to the presence of cheetah, depending on differences in perceived vulnerability to cheetah predation. To address this, shifts in habitat use, and behavioural responses of the ungulate community reflected at landscape and patch scale were investigated. Overall, ungulate species have not shifted habitat use since cheetah reintroduction, this was possibly related to life history strategy constraints and the need for individuals to obtain suitable forage and therefore remain in specific habitats. While no shift in habitat use was observed for the majority of ungulate species, a shift in behaviour was observed for kudu (Tragelaphus strepsiceros) at a landscape scale, where kudu dedicated more time to vigilance and less time to foraging within the predator section. In addition, individuals within smaller kudu groups were observed to be more vigilant than individuals within larger groups of kudu within the predator section. Although the other three ungulate species monitored did not increase time spent vigilant within the predator section, they still maintained relatively high levels of vigilance, potentially as a means of social monitoring. At a patch level, ungulate species responded strongly to a predator cue as a proxy for cheetah proximity, and increased time spent vigilant with a trade-off of lower foraging effort. This vigilant response was strongest for kudu. Differences in perceived predation risk were reflected within eland (Tragelaphus oryx) and kudu species demographic classes, with juvenile eland and kudu, adult female kudu and subadult female kudu spending more time vigilant within manipulated patches than respective males of each species. Kudu were also observed adopting fine-scale behavioural responses to minimize predation risk within patches. The asymmetrical prey species response to perceived predation risk from cheetah supports the hypothesis that different species respond differently to the presence of a predator. Furthermore, this study illustrated the importance of measuring prey responses to predation risk across multiple scales and highlighted the need to replicate this study for a number of different sites where predators have been reintroduced, to better understand the range of factors influencing these predator-prey interactions.
- Full Text:
- Date Issued: 2012
Investigation of the performance of photovoltaic systems
- Authors: Alistoun, Warren James
- Date: 2012
- Subjects: Photovoltaic power systems -- South Africa , Photovoltaic power generation -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10517 , http://hdl.handle.net/10948/d1008396 , Photovoltaic power systems -- South Africa , Photovoltaic power generation -- South Africa
- Description: The main objective of this study was to investigate the performance of grid integrated PV systems. A data acquisition (DAQ) system was developed to monitor the performance of an existing grid integrated PV system with battery storage. This system is referred to as a grid assisted PV system. A data logger was used together with the inverters built in data logger to monitor environmental and electrical data on a grid tie PV system which was deployed during this study. To investigate the performance of these grid integrated PV systems PV and BOS device characterization was performed. This was achieved by using current voltage curve tracers and the DAQ system developed. Energy yield estimations were calculated referring to the literature review and a meteorological reference for comparison with measured energy yields from the grid tie PV system.
- Full Text:
- Date Issued: 2012
Leopard population density, home range size and movement patterns in a mixed landuse area of the Mangwe District of Zimbabwe
- Authors: Grant, Tanith-Leigh
- Date: 2012
- Subjects: Leopard -- Monitoring -- Zimbabwe , Leopard -- Conservation -- Zimbabwe , Wildlife monitoring -- Zimbabwe , Wildlife conservation -- Zimbabwe
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5726 , http://hdl.handle.net/10962/d1005412 , Leopard -- Monitoring -- Zimbabwe , Leopard -- Conservation -- Zimbabwe , Wildlife monitoring -- Zimbabwe , Wildlife conservation -- Zimbabwe
- Description: Trophy hunting is often employed as a conservation management tool for large predators. However, in order for this method to succeed, hunting levels must be sustainable. Very little robust population data exist for African leopards (Panthera pardus) in general, and almost no density or spatial ecology data exist for leopards in Zimbabwe. Zimbabwe has one of the highest annual CITES leopard trophy hunting quotas in Africa, the sustainability of which has not been assessed, despite large scale landuse changes over the last 12 years. The focal area of this study was within the Mangwe district, in the south-west of Zimbabwe. The region is dominated by cattle and wildlife ranches, with high levels of leopard hunting, making it an important area for assessing leopard population density and spatial ecology. Three population density estimation methods were employed in my study: a spoor index survey, an unbaited camera-trapping survey and a baited camera-trapping survey. Using three calibration equations, spoor indices appeared to underestimate the leopard population (1.28-3.29 leopards/ 100 km²) as the equations were calibrated for areas with different habitats and leopard densities. In addition, the unbaited camera survey only produced six leopard photographs, unsuitable for individual identification and analysis. By contrast, the baited camera survey produced 292 identifiable leopard photographs, from which 13 individuals were identified. Density estimates calculated using the programme CAPTURE and the M[subscript]h model with the Mean Maximum Distance Moved Outside of Study Area (MMDMOSA) buffer method (4.79±0.83 leopards/100 km²), and the programme SPACECAP, using a buffer of 2.5 km (5.12±0.62 leopards/100 km²), appeared to generate the most reliable leopard population estimates. To assess the spatial ecology, three leopards (one male, two females) were captured and fitted with GPS collars. The home range estimates of the three leopards (95% Kernel UD: male 263 km², females 31 and 45 km²) were smaller than those of leopards in more arid regions, but larger than those of mesic habitats. This suggests that the Mangwe area has a higher quality habitat than the arid regions of Namibia, but less suitable habitat than protected bushveld areas (e.g. Kruger National Park, South Africa). My data represents the first robust leopard density and home range assessment for Zimbabwe. In addition, my results indicate that the current hunting quota issued to the Mangwe area is unsustainable. Consequently, I recommend revising the quota to five leopards for the entire area, and halving the current national leopard quota to 250, until a national leopard census is completed.
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- Date Issued: 2012
Macrophyte distribution and responses to drought in the St Lucia Estuary
- Authors: Nondoda, Sibulele Phefumlela
- Date: 2012
- Subjects: Estuaries -- South Africa -- Saint Lucia, Lake , Lakes -- South Africa -- Saint Lucia, Lake , Vegetation mapping -- South Africa -- Saint Lucia, Lake , Estuarine sediments -- South Africa -- Saint Lucia, Lake , Wetland mapping -- South Africa --Saint Lucia, Lake
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10632 , http://hdl.handle.net/10948/d1012330 , Estuaries -- South Africa -- Saint Lucia, Lake , Lakes -- South Africa -- Saint Lucia, Lake , Vegetation mapping -- South Africa -- Saint Lucia, Lake , Estuarine sediments -- South Africa -- Saint Lucia, Lake , Wetland mapping -- South Africa --Saint Lucia, Lake
- Description: This study investigated the response of the macrophytes in St Lucia Estuary, northern KwaZulu-Natal to drought. The present distribution of vegetation (2010 / 2011) was mapped and changes over time recorded from past aerial photographs. The changes in macrophyte cover in response to environmental factors (sediment and groundwater characteristics) was measured along four transects in 2010 and compared with results from previous years, in 2005 and 2006. In the current study, 1960 images were digitized to illustrate macrophyte distribution and cover of the Narrows, Makakatana and the Eastern Shores during a low rainfall period which started in 1958. The 2001 images were digitized to illustrate vegetation distribution and cover of the same area prior to the current drought which started in June/ July 2002. The 2008 images were digitized to illustrate vegetation distribution and cover of estuarine vegetation within the floodplain during the drought (after 6 years). The sites were visited in June 2011 for verification of the distribution and boundaries of each macrophyte habitat. The area covered by the water column varied over time. In 1960 during a low rainfall period the water was 32705 ha, 33320 ha in 2001 and reduced to 30443 ha in 2008. The area cover of inundated and dry reeds fluctuated with the water level. Under high water levels, low-lying areas such as Fanies Island and Selley‟s Lake were flooded and under low water levels, intertidal sand and mudflats were exposed and colonised by succulent salt marsh (Sarcocornia spp. and Salicornia meyeriana). Similar conditions were observed at Makakatana. Mangroves were observed from the mouth to the Forks. Avicennia marina was the dominant mangrove species and primary colonizer of dredge spoil. The area cover of mangroves in the vicinity of the mouth fluctuated as a result of fluctuating water levels, dredging operations, excavation of the Back Channel and Cyclone Gamede which killed intertidal vegetation. Between 2001 and 2008, mangrove expansion was faster in the Mfolozi Swamps area (± 1.4 ha yr -1) compared to the Narrows (± 0.4 ha yr -1). Long term monitoring transects were set up in 2005, at Makakatana, Charters Creek, Catalina Bay and at Listers Point to document changes in sediment conditions and vegetation cover. These were sampled in July 2005, October 2005, February 2006 and May 2010. Silt was the dominant particle size at Catalina Bay, Charters Creek and Makakatana. At Makakatana, average ground water salinity was 17.2 ± 6.6 ppt, 4.1± 4.9 ppt at Catalina Bay and 32.9 ± 19.3 ppt at Charters Creek. Drought resulted in the accumulation of salt on the surface sediment layer at Listers Point and Charters Creek due to low rainfall. Listers Point, the site with the lowest freshwater input and habitat diversity had the lowest macrophyte species richness with only three species. The dominant species at this site were Sporobolus virginicus and Chenopodium album L. which are highly salt tolerant species. Catalina Bay had the highest species richness (18 to 27); as a result of freshwater input via groundwater seepage from the sand dune aquifers on the Eastern Shores. Along the Eastern Shores, vegetation was dominated by species of Cyperaceae, Juncaceae and Juncaginaceae. Fluctuations in groundwater depth were observed at all sites, Listers Point groundwater depth in February 2006 was 80 cm and the ground water level was not reached during the May 2010 field trip. During the May 2010 field trip, the water column salinity of the St Lucia system was highly variable, Makakatana had the lowest water column salinity of 7.1 ppt, 42.1 ppt at Catalina Bay, 44 ppt at Charters Creek and Listers Point had the highest water column salinity of 95 ppt. An assessment of the changes in macrophyte cover along the transects showed that cover fluctuated in response to rainfall, water level and drought. At Listers Point, there was a continuous decline in the abundance of Sporobolus virginicus over time which was sparsely distributed in the first 40 m of the transect. Sarcocornia natalensis, a succulent and obligate halophyte, was recorded, in areas with high sediment conductivity. In May 2010, bare ground increased to an average percentage cover of 96.5% and was covered with dead organic matter and a salt crust at Listers Point. At Makakatana, there was a significant decrease in bare ground from July 2005 to May 2010 (H = 24.58, N = 197, p<0.001) as bare areas were colonized by salt marsh. Multivariate analysis showed that the abundance of Sporobolus virginicus was positively influenced by sediment moisture content and Paspalum vaginatum abundance was strongly influenced by the water column salinity. At Catalina Bay, low sediment conductivity at the groundwater seepage area resulted in terrestrial vegetation encroaching on estuarine vegetation. Sarcocornia natalensis became more abundant towards the water column. During the period of study, species richness at St Lucia ranged from 2 (Listers Point, May 2010) to 27 (Catalina Bay, February 2006). Salinity and water level fluctuation have a significant impact on the distribution of macrophytes at St Lucia during the drought. In saline areas salt marsh plants have colonized exposed shorelines and along the Eastern Shores groundwater seepage has increased macrophyte species richness. Low water levels have resulted in the exposure and desiccation of submerged macrophytes, which are replaced by macroalgae.
- Full Text:
- Date Issued: 2012
Microalgae and macrophytes as indicators of ecological health in the Great Brak Estuary
- Authors: Nunes, Monique
- Date: 2012
- Subjects: Microalge -- South Africa -- Great Brak Estuary , Estuarine ecology -- South Africa , Aquatic plants -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10629 , http://hdl.handle.net/10948/d1012097 , Microalge -- South Africa -- Great Brak Estuary , Estuarine ecology -- South Africa , Aquatic plants -- South Africa
- Description: The Great Brak temporarily open/closed estuary was subjected to a drought during the spring and summer of 2009/2010 resulting in the mouth remaining closed for a prolonged period. According to the Great Brak Estuary management programme, the mouth of the estuary had to be open for a total of 308 days during spring and summer of 2009/2010, respectively, but was closed for almost the entire two years (693 days). The aim of this study was to assess monthly changes in the abiotic characteristics (salinity, temperature, oxygen, pH and nutrients) and the biotic responses of phytoplankton and macroalgae; identify sources of nutrient input into the estuary and determine the response of the salt marsh to water level and salinity changes. The results indicated that physico-chemical parameters were similar to that previously recorded during the closed mouth condition. However mouth closure combined with elevated nutrient concentrations led to a shift from rooted submerged macrophytes to one where either microalgae or macroalgae were dominant. Soluble reactive phosphorus concentrations were significantly higher in bottom compared with surface waters. There was a significant negative correlation with SRP and dissolved oxygen for the sampling period indicating potential release of phosphorus from the sediment during closed mouth conditions. Microalgal biomass increased in response to remineralised nutrients and freshwater pulses. Flagellates were the dominant microalgal group (21718 ± 3336 cells m l-1, p < 0.05) because of their morphological ability to migrate vertically within the water column. The macroalgal cover was highest during the closed mouth state but only during winter (August 2010) when temperatures were below 20 oC. Five major point sources of nutrient input into the Great Brak Estuary were identified during rainfall periods. Point sources 4 and 5 in the upper reaches of the estuary had the highest DIN input whereas point source 3 in the middle reaches of the estuary had the highest DIP input. As a result of the drought and low water level, the salt marsh was never inundated for longer than 3 months. Die-back of Sarcocornia decumbens (r 2= -0.62, p < 0.05) was related to smothering by dead macroalgae whereas dieback of Sporobolus virginicus was related to decreasing nutrient (r2 = 0.59, p < 0.05) and salinity (r2 = 0.55, p < 0.05) levels. The physico-chemical characteristics alone did not convey the true health status of the Great Brak Estuary for the duration of the sampling (April 2010-April 2011). The study showed that microalgae and macroalgae are valuable indicators of the status of the estuary. Therefore it is suggested that bio-indicators are incorporated into the management/monitoring plan in order to assist in improving the health assessment of the Great Brak Estuary.
- Full Text:
- Date Issued: 2012
On the underwater visual census of Western Indian Ocean coral reef fishes
- Authors: Wartenberg, Reece
- Date: 2012
- Subjects: Coral reef fishes -- Africa, Southern , Coral reef fishes -- Indian Ocean , Coral reef fishes -- Behavior , Fish communities -- Africa, Southern , Fish communities -- Indian Ocean , Groundfishes -- Africa, Southern , Groundfishes -- Indian Ocean , Groundfishes -- Behavior
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5308 , http://hdl.handle.net/10962/d1005153 , Coral reef fishes -- Africa, Southern , Coral reef fishes -- Indian Ocean , Coral reef fishes -- Behavior , Fish communities -- Africa, Southern , Fish communities -- Indian Ocean , Groundfishes -- Africa, Southern , Groundfishes -- Indian Ocean , Groundfishes -- Behavior
- Description: This study conducted the first high-resolution investigation of the ichthyofaunal assemblages on a high-latitude coral reef in the Western Indian Ocean (WIO). Two-Mile reef, in South Africa, is a large, accessible patch-reef, and was selected as a candidate study area. Although the effect of season in structuring coral reef fish communities is most-often overlooked, the relationship between these fish communities and their habitat structure has been investigated. In South Africa, however, neither of these potential community-level drivers has been explored. As coral reefs worldwide are faced with high levels of usage pressure, nondestructive underwater visual census (UVC) techniques were identified as the most appropriate survey methods. This study had two primary aims that were; (1) to identify the most suitable technique for the UVC of coral reef fishes, and to test variations of the selected technique for appropriateness to implementation in long-term monitoring programs, and (2) to determine if possible changes to ichthyofaunal community structure could be related to trends in season and/or habitat characteristics. A review of the literature indicated that the most appropriate UVC method for surveying epibenthic coral reef fishes is underwater transecting. To compare the traditional slate-based transects to variations that implement digital image technology, slate transects were compared to a first-attempt digital photographic transect technique, and digital videographic transects. Videographic transects produced the most favourable species richness, abundance, and standard deviations of the three techniques. Diversity was not significantly different between transect techniques. The minimum required sample size was lowest for videographic transects (17 replicates), intermediate for photographic transects (27 replicates) and highest for slate transects (37 replicates). Videographic and photographic transects required greater analysis time to generate counts, but required lower observer training time. While videographic transects produced the lowest proportion of species considered unidentifiable, all three transect techniques showed similar functionality to surveying epibenthic coral reef fishes. Videographic transects were therefore identified as the most appropriate UVC technique for this study. Videographic transects at shallow (6 – 14 m), intermediate (14 – 22 m) and deep (22 – 30 m) depths in mid-winter and mid-summer, sampled a total of 41 families consisting of 209 species and 18172 individuals, dominated by pomacentrids in abundance and labrids in richness. The fish assemblages on Two-Mile Reef were found to be similar in composition to lower-latitude WIO reefs. Overall ichthyofaunal abundance and richness was significantly higher in summer than in winter, and was higher at shallow sites than at intermediate and deep sites. A multivariate approach confirmed differences between seasons at shallow depths but not between seasons at intermediate and deep depths. The fish assemblages on Two-Mile Reef can therefore be described as being comprised of four relatively distinct communities: a shallow, winter community; a shallow, summer community; a year-round intermediate community; and a year-round deep community. The distributions of discriminating species indicated that high abundances of the algal-feeding pomacentrids are observed only at shallow and intermediate sites while high abundances of the zooplanktivorous serranid subfamily, the Anthiinae, are observed predominantly at deep sites. Assessment of all measured supplementary variables indicated that of all factor combinations, observed patterns could be ascribed most strongly to depth. Quantification of reef characteristics indicated that as depth increases, habitat complexity decreases, benthic communities shift from dense coral domination to sparse sponge domination, and algal biomass and cover decreases. The ability of the videographic transect technique to detect changes in community structure with season and depth indicates that season and depth should be accounted for in future high-latitude ichtyofaunal surveys, and that the videographic transect technique is suitable for implementation in long-term monitoring programs on coral reefs. The similarity in fish assemblages between Two-Mile Reef and lower latitude regions suggests that the protocol for surveying epibenthic coral reef fishes, resulting from this study, is relevant throughout the continental WIO.
- Full Text:
- Date Issued: 2012
Phenotypic plasticity of metabolic rate in an afrotropical bird species (Euplectes orix) across a temperature gradient
- Authors: Van de Ven, Tanja Maria Francisca Nicole
- Date: 2012
- Subjects: Phenotypic plasticity , Evolutionary genetics
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10718 , http://hdl.handle.net/10948/d1012659 , Phenotypic plasticity , Evolutionary genetics
- Description: Avian species are known to have the capacity to respond to environmental changes through physiological adjustments. The process whereby organisms adjust their phenotype without genetic change is termed phenotypic plasticity and it is mostly observed to be a phenotypic improvement to ecological challenges. Metabolic rate (MR), which is the rate of energy expenditure in a species, is a highly flexible physiological parameter which results in a great diversity of avian standardised metabolic rates. Like birds from high latitudes, Afrotropical bird species are expected to have the capacity to adjust their energy expenditure to match the availability of resources. Previous studies on the flexibility of physiological parameters in birds have focused on the magnitude of change of physiological adjustments and the cues inducing these changes. Comparative research has furthermore investigated metabolic rates across aridity, altitude, latitude and temperature gradients. Recently, a clear dichotomy has become evident with elevated metabolic rates observed in high latitude birds in winter and a down-regulation of metabolic rates observed in birds exposed to low latitude mild winters. In this study, the shape of the reaction norm, the magnitude, the reversibility, the direction and the rate of change of two physiological parameters, basal metabolic rate (BMR) and summit metabolic rate (Msum), were investigated in a coastal and an inland population of Southern Red Bishops (Euplectes orix) through seasonal acclimatisation and laboratory acclimation. Summer and winter basal metabolic rates as well as body mass, were highly flexible traits in free-ranging coastal and inland Red Bishops. Birds acclimatised to a mild coastal climate in winter exhibited reduced basal and summit metabolic rates, whereas birds originating from a more variable inland climate increased basal metabolic rate in winter, but did not show increases of Msum in winter. Red Bishops responded to short term thermal acclimation under laboratory conditions by gradually changing body mass. Acclimation periods of 21 days revealed a negative relationship between body mass and acclimation air temperature. Peak responses of basal metabolic rate to ambient temperature change were observed in both coastal and inland birds between two and eight days after the change in acclimation air temperature. The influences of seasonal acclimatisation on energy expenditure differed between coastal and inland birds, however, during laboratory acclimation individuals from the two populations showed no difference in response. Within the individuals of the coastal and inland Southern Red Bishops, phenotypic flexibility is observed in body mass, basal metabolic rate and summit metabolic rate as a response to environmental changes. This flexibility is thought to increase thermoregulatory capacities of the Southern Red Bishop in different habitats and climates.
- Full Text:
- Date Issued: 2012
Physico-chemical and microalgal characteristics of the Goukamma Estuary
- Authors: Kaselowski, Tanja
- Date: 2012
- Subjects: Estuarine ecology , Estuaries -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10623 , http://hdl.handle.net/10948/d1011130 , Estuarine ecology , Estuaries -- South Africa
- Description: Estuaries are intrinsically complex and dynamic ecosystems that display marked spatial and temporal variability. Because estuaries are situated at the receiving end of catchment activities, they are at particular risk of alterations to their natural complexity. The overarching objective of this study was to gain an overview of the abiotic conditions and biotic response of the Goukamma Estuary, a small temporarily open/closed estuary (TOCE) which is situated in a relatively undisturbed catchment in the Southern Cape. Physico-chemical properties drive estuarine ecology, and together with biological indicators, are commonly assessed to determine the present status of an estuary. During the study, physico-chemical parameters reflected great spatial and temporal variability in response to the mouth state over a 13 month period. Parameters ranged within expected limits, as proposed by the conceptual model for water quality of TOCE’s (Snow and Taljaard 2007). Of particular importance was the prominent occurrence of salinity stratification and hypoxic conditions (dissolved oxygen [DO] < 3 mg l-1) during both open and closed mouth states. Data indicated that in the wide and shallow lower reaches, weak stratification gradients were present and oxygenated conditions (DO > 6 mg l-1) were maintained throughout the water column mainly by wind and tidal action. However, stratification increased towards the deeper, channel-like middle and upper reaches of the estuary, followed by a significant reduction in bottom DO concentrations and development of hypoxia and anoxia. Bottom water hypoxia commonly occurs in microtidal estuaries due to the limited influence of mixing forces, mainly by wind and tidal action. The Goukamma Estuary is a channel-like microtidal estuary where stratification effectively limited oxygenation of the bottom water which resulted in frequent occurrence of bottom water hypoxia. During June 2010 when the highest local rainfall (75 mm) was recorded for the region, salinity and DO data showed that this amount of rainfall was insignificant as it did not replenish the water column of oxygen. Only the surface 0.5 m layer was fresh and oxygenated while below this, the water column was completely hypoxic. In an unimpacted state, the Goukamma Estuary is a blackwater system and is expected to be nutrient poor; however, farming activities in the catchment have resulted in elevated nutrient concentrations. This study showed that significantly higher nutrient concentrations were measured in the middle and upper reaches of the estuary, adjacent to cattle farms situated in the floodplain of these reaches. Nutrient concentrations represented mesotrophic (dissolved inorganic nitrogen [DIN] > 500 μg l-1) to eutrophic conditions (dissolved inorganic phosphorus [DIP] > 25 μg l-1). Nutrient input stimulated phytoplankton to attain a significantly high biomass, ranging between 0.3 – 112 μg l-1 (~ 7.7 ± 1.3 μg l-1; n = 128) and 0.8 – 289 μg l-1 (~ 21.1 ± 4.4 μg l-1; n = 80) during the open and closed states, respectively. High organic loads are associated with high oxygen demands which consequently result in hypoxia following decomposition. Exacerbated by natural salinity stratification which effectively limits oxygenation of the water column, unnaturally high nutrient concentrations and coinciding organic loads place the estuary at particular risk of degradation. This study captured key patterns and processes by quantifying salinity, oxygen and nutrient concentrations in addition to biological indicators (phytoplankton biomass and community composition). Considering possible budget constraints, it is recommended that monthly salinity and oxygen concentrations should be monitored as well as seasonal nutrient concentrations. It is also recommended that riparian buffer zones should be established in the middle and upper reaches of the estuary, as these vegetation buffers have been well documented to contribute to nutrient attenuation and improved water quality from agricultural run-off.
- Full Text:
- Date Issued: 2012
Population dynamics of the white shark, Carcharodon carcharias, at Mossel Bay, South Africa
- Authors: Ryklief, Rabiah
- Date: 2012
- Subjects: White shark -- South Africa -- Mossel Bay , Sharks -- South Africa -- Mossel Bay
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10717 , http://hdl.handle.net/10948/d1012077 , White shark -- South Africa -- Mossel Bay , Sharks -- South Africa -- Mossel Bay
- Description: Mossel Bay is internationally recognised as one of the centres of abundance of white sharks in South Africa. During 2008 – 2010 there were four sites within the bay i.e. Seal Island, Hartenbos, Kleinbrak and Grootbrak, which were sampled to gain insight into the population dynamics of this species. Currently, life history information on white sharks in this area is limited. This study used a combination of mark-recapture using photographic identification techniques and sight per unit effort methods. Inter-annual, seasonal and spatial patterns in abundance are assessed. The effects of environmental parameters on abundance are also investigated. Photographic identification techniques were employed to identify unique individuals within the sampled population. This modified mark-recapture approach is therefore non-invasive and cost-effective. Open population POPAN parameterization was used to analyse the data in software program MARK. The total population was estimated at 389 sharks (351 – 428; 95 percent CI). Over the three year period, a marginal (yet non-significant) decline in numbers was observed, in terms of both monthly and seasonal population estimates. Sightings per unit effort data were collected during sampling trips. The relative abundance and body size composition of white sharks demonstrated significant spatial and seasonal variation. The highest and lowest relative abundance was observed at Seal Island and Hartenbos, respectively, and is likely attributed to prey availability. Although white sharks were present year-round in Mossel Bay, the highest relative abundance occurred during summer and the lowest relative abundance occurred during spring. White sharks were grouped into three main size classes based on estimated total length (TL): Young of the year (YOY) (125 – 174cm), juvenile (175 – 324cm) and adult (325 – 524cm). YOY white sharks were most prevalent at Grootbrak, with juvenile and adult individuals concentrating at Seal Island. Although most size classes were present throughout the year, seasonal differences were observed. YOY individuals were most abundant in the autumn months, juvenile size-classes appeared to concentrate in the study area during winter, and the adult individuals were most abundant in the spring months. Overall, there was a high concentration of white sharks ranging in size between 175 – 324cm TL, and it was thus hypothesised that Mossel Bay represents an interim nursery or grow out area for white sharks in South Africa. Data collected from 2008 and 2009 was used to investigate the relationship between specific environmental parameters, i.e. sea surface temperature and vertical water clarity, in relation to the relative abundance of white sharks. Sea surface temperature and vertical water clarity observed in this study ranged from 9.3 - 22.7°C and 0 – 10m, respectively. Sea surface temperature did not have a significant influence on the relative abundance of white sharks and this may be attributed to the thermoregulatory capacity of the species. Vertical water clarity, however, did significantly influence the relative abundance. Furthermore, the combined effect of site and season significantly influenced the relative abundance of white sharks and is probably linked to the distribution and abundance of inshore prey resources.
- Full Text:
- Date Issued: 2012
Population dynamics of the Zuurberg Cycad and the predicted impact of climate change
- Authors: Singh, Karishma
- Date: 2012
- Subjects: Cycads -- South Africa -- Eastern Cape , Encephalartos -- South Africa -- Eastern Cape , Climate change -- South Africa -- Eastern Cape
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10633 , http://hdl.handle.net/10948/d1012857
- Description: Cycads first appeared about 300 million years ago and historical data indicates that they survived fluctuations of global temperature and carbon dioxide concentrations and reached peak abundance during periods where temperature and carbon dioxide concentrations were much higher than the present conditions as well as the predicted increased levels. With Africa being one of the most vulnerable regions to climate change and in the absence of an evaluation of predicted impacts of climate change on cycads, this study aims to contribute to our understanding of responses of Encephalartos longifolius to increased temperature. Encephalartos longifolius (Jacq.) Lehm is an Eastern Cape endemic and like most cycads has been around for millions of years with very little change to its basic structure. Photosynthetic rates showed E.longifolius seedlings have C3 photosynthesis and even under stress they do not switch over to CAM photosynthesis. The photosynthetic rates of seedlings showed a typical C3 -plant type response under elevated carbon dioxide levels. Increased temperatures could be detrimental to the species but coupled with elevated carbon dioxide levels the growth of Encephalartos longifolius are postulated to outweigh the negative impacts of increased temperatures. Whilst climatic conditions in the Eastern Cape might not impact the abundance of Encephalartos longifolius, the species however is declining rapidly to the present near-threatened status. Demographic studies revealed a high percentage of juvenile numbers in the wild; however juvenile plants are impacted on by animals thereby jeopardizing their survival. Adult plants are heavily impacted on by animals; this reduces the probability of new offspring being produced. Cycads are also very slow - growing which is the primary cause of their ruin in the wild. Encephalartos longifolius grows at just over approximately 1 cm per year with growth being more rapid in the juvenile plants. Once juvenile plants reach approximately 60 cm they stop growing in diameter but only get taller. Seed germination is also a very slow process with an optimum temperature of 28°C and a growth medium of at least 50 percent moisture. Regardless of the Eastern Cape predicted to become the hottest province in South Africa as a result of climate change, cycads will be able to adapt to the changing environment and conservation plans should focus on animal and human impacts that are the major force causing decreasing abundance of Encephalartos longifolius in the wild.
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- Date Issued: 2012
Propagation and stress physiology of selected Subtropical Thicket species : towards increasing biodiversity at rehabilitation sites
- Authors: Louw, Merika
- Date: 2012
- Subjects: Biodiversity conservation , Plant physiology , Stress (Physiology) , Plant propagation
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:10758 , http://hdl.handle.net/10948/d1021115
- Description: Sundays Thicket and Spekboomveld vegetation in the Eastern Cape have experienced intensive and extensive degradation due to over-browsing by domestic stock. The Subtropical Thicket Restoration Project aims to take advantage of the high carbon sequestration potential of Portulacaria afra (Spekboom) and other Thicket species, to rehabilitate degraded Thicket by restoring biodiversity and ecosystem services, create job opportunities and socio-economic upliftment in local communities, and promote the trade of carbon credits generated by planting and „farming‟ with Spekboom truncheons, rather than domestic stock. Plant material (seeds and length of stem) was sourced from the farm Krompoort, outside Uitenhage in the Eastern Cape. The effectiveness of four different rooting media i.e. plain pool filter sand and 1:1 mixtures of pool filter sand with perlite, potting soil and Thicket soil, on the rooting of ten Thicket species, were tested. Species with the greatest percentage strike and mean root length on stem cuttings were succulent species, Crassula ovata (84 percent strike) and Portulacaria afra (97 percent), as was expected. The application of rooting hormone Seradix© No. 3 did not significantly promote cutting strike or increase mean root length in C. ovata and P. afra. Woody canopy shrub species with the greatest cutting strike and mean root length, overall, were Rhigozum obovatum (24 percent), Lycium cinereum and L. oxycarpum (21 percent), and Searsia longispina (19 percent). These species, as well as Grewia robusta (4 percent), are considered „easy-to-root‟ species, or of sufficient functional value in terms of their spinescence, flower and fruit production, and soil-binding capabilities. Very low percentage strike (<1 percent) and mean root length were achieved in Azima tetracantha, Carissa bispinosa and Gymnosporia polyacantha subsp. polyacantha. These species are considered unsuitable for propagation for rehabilitation purposes. Crassula ovata, L. cinereum, L. oxycarpum, P. afra and S. longispina cuttings produced longer roots when planted in Thicket soil, the same having been found in R. obovatum cuttings planted in perlite. Thicket soil was, therefore, best at promoting cutting strike and root growth in „easy-to-root‟ species. Plain pool filter sand was the only medium in which A. tetracantha, C. bispinosa and G. robusta, cuttings rooted, and perlite the only medium in which G. polyacantha subsp. polyacantha cuttings rooted. Potting soil did not promote significant cutting strike or root growth in any of the species tested. Physiological variables i.e. photosynthetic efficiency (chlorophyll a fluorescence, Fv/Fm) and stomatal conductance (mmol H2O m-2 s-1) were measured for ten Thicket species, including Portulacaria afra. Control plants were watered well once a week, and treatment plants were dried out for 30 days, rewatered on the 30th day and their recovery from drought stress monitored for a further 17 days. Species that responded poorly to drought stress were Gymnosporia buxifolia and Putterlickia pyracantha. In addition to Portulacaria afra, species that showed the fastest recovery and resprout after rewatering, were: Crassula ovata, Ehretia rigida, Grewia robusta, Lycium ferocissimum, Rhigozum obovatum and Searsia longispina. These species produced the smallest decline in volumetric moisture content of soil, and had the lowest decline in photosynthetic efficiency and stomatal conductance during simulated drought. Unlike C. ovata and P. afra, which are CAM or C3-CAM switching species, mortality of transplants will most likely be high, if not total, during transplantation, as this study was done at lower light and temperature, and higher humidity levels than experienced at rehabilitation sites. This study has shown that the reintroduction of propagated woody canopy shrubs and trees into degraded Thicket sites does not appear to be a practical or economical method of actively restoring biodiversity to rehabilitation sites. As woody climax species have been shown to return to sites planted with Spekboom truncheons through „natural regeneration‟ within approximately 50 years, future research efforts should focus on optimising restoration site selection and planting techniques in order to maximize carbon sequestration potential of planted truncheons, which will, in the long term, result in an environment that can support regeneration of the biodiversity to something resembling intact Thicket.
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- Date Issued: 2012