A novel dimeric exoglucanase (GH5_38): Biochemical and Structural Characterisation towards its Application in Alkyl Cellobioside Synthesis
- Authors: Mafa, Mpho S , Dirr, Heinrich , Malgas, Samkelo , Krause, Rui W M , Pletschke, Brett I
- Date: 2020
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/193976 , vital:45412 , xlink:href="https://doi.org/10.3390/molecules25030746"
- Description: An exoglucanase (Exg-D) from the glycoside hydrolase family 5 subfamily 38 (GH5_38) was heterologously expressed and structurally and biochemically characterised at a molecular level for its application in alkyl glycoside synthesis. The purified Exg-D existed in both dimeric and monomeric forms in solution, which showed highest activity on mixed-linked β-glucan (88.0 and 86.7 U/mg protein, respectively) and lichenin (24.5 and 23.7 U/mg protein, respectively). They displayed a broad optimum pH range from 5.5 to 7 and a temperature optimum from 40 to 60 °C. Kinetic studies demonstrated that Exg-D had a higher affinity towards β-glucan, with a Km of 7.9 mg/mL and a kcat of 117.2 s−1, compared to lichenin which had a Km of 21.5 mg/mL and a kcat of 70.0 s−1. The circular dichroism profile of Exg-D showed that its secondary structure consisted of 11% α-helices, 36% β-strands and 53% coils. Exg-D performed transglycosylation using p-nitrophenyl cellobioside as a glycosyl donor and several primary alcohols as acceptors to produce methyl-, ethyl- and propyl-cellobiosides. These products were identified and quantified via thin-layer chromatography (TLC) and liquid chromatography–mass spectrometry (LC-MS). We concluded that Exg-D is a novel and promising oligomeric glycoside hydrolase for the one-step synthesis of alkyl glycosides with more than one monosaccharide unit.
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- Date Issued: 2020
Evaluating Feruloyl Esterase—Xylanase Synergism for Hydroxycinnamic Acid and Xylo-Oligosaccharide Production from Untreated, Hydrothermally Pre-Treated and Dilute-Acid Pre-Treated Corn Cobs:
- Authors: Mkabayi, Lithalethu , Malgas, Samkelo , Wilhelmi, Brendan S , Pletschke, Brett I
- Date: 2020
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/149240 , vital:38818 , https://doi.org/10.3390/agronomy10050688
- Description: Agricultural residues are considered the most promising option as a renewable feedstock for biofuel and high valued-added chemical production due to their availability and low cost. The efficient enzymatic hydrolysis of agricultural residues into value-added products such as sugars and hydroxycinnamic acids is a challenge because of the recalcitrant properties of the native biomass. Development of synergistic enzyme cocktails is required to overcome biomass residue recalcitrance, and achieve high yields of potential value-added products. In this study, the synergistic action of two termite metagenome-derived feruloyl esterases (FAE5 and FAE6), and an endo-xylanase (Xyn11) from Thermomyces lanuginosus, was optimized using 0.5% (w/v) insoluble wheat arabinoxylan (a model substrate) and then applied to 1% (w/v) corn cobs for the efficient production of xylo-oligosaccharides (XOS) and hydroxycinnamic acids.
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- Date Issued: 2020
The Effects of Alkaline Pretreatment on Agricultural Biomasses (Corn Cob and Sweet Sorghum Bagasse) and Their Hydrolysis by a Termite-Derived Enzyme Cocktail:
- Authors: Mafa, Mpho S , Malgas, Samkelo , Bhattacharya, Abhishek , Rashamuse, Konanani , Pletschke, Brett I
- Date: 2020
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/160273 , vital:40430 , https://doi.org/10.3390/agronomy10081211
- Description: Sweet sorghum bagasse (SSB) and corncob (CC) have been identified as promising feedstocks for the production of second-generation biofuels and other value-added chemicals. In this study, lime (Ca(OH)2) and NaOH pretreatment efficacy for decreasing recalcitrance from SSB and CC was investigated, and subsequently, the pretreated biomass was subjected to the hydrolytic action of an in-house formulated holocellulolytic enzyme cocktail (HEC-H). Compositional analysis revealed that SSB contained 29.34% lignin, 17.75% cellulose and 16.28% hemicellulose, while CC consisted of 22.51% lignin, 23.58% cellulose and 33.34% hemicellulose. Alkaline pretreatment was more effective in pretreating CC biomass compared to the SSB biomass.
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- Date Issued: 2020
The inhibitory effects of various substrate pre-treatment by-products and wash liquors on mannanolytic enzymes
- Authors: Malgas, Samkelo , Van Dyk, J Susan , Abboo, Sagaran , Pletschke, Brett I
- Date: 2016
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/66156 , vital:28911 , https://doi.org/10.1016/j.molcatb.2015.11.014
- Description: publisher version , Biomass pre-treatment is essential for achieving high levels of bioconversion through increased accessibility of hydrolytic enzymes to hydrolysable carbohydrates. However, pre-treatment by-products, such as sugar and lignin degradation products, can negatively affect the performance of hydrolytic (mannanolytic) enzymes. In this study, two monomeric sugars, five sugar degradation products, five lignin derivatives and four liquors from biomass feedstocks pre-treated by different technologies, were evaluated for their inhibitory effects on mannanolytic enzymes (α-galactosidases, β-mannanases and β-mannosidases). Lignin derivatives elicited the greatest inhibitory effect on the mannanolytic enzymes, followed by organic acids and furan derivatives derived from sugar degradation. Lignin derivative inhibition appeared to be as a result of protein–phenolic complexation, leading to protein precipitating out of solution. The functional groups on the phenolic lignin derivatives appeared to be directly related to the ability of the phenolic to interfere with enzyme activity, with the phenolic containing the highest hydroxyl group content exhibiting the greatest inhibition. It was also demonstrated that various pre-treatment technologies render different pre-treatment soluble by-products which interact in various ways with the mannanolytic enzymes. The different types of biomass (i.e. different plant species) were also shown to release different by-products that interacted with the mannanolytic enzymes in a diverse manner even when the biomass was pre-treated using the same technology. Enzyme inhibition by pre-treatment by-products can be alleviated through the removal of these compounds prior to enzymatic hydrolysis to maximize enzyme activity.
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- Date Issued: 2016