The use of remote sensing and Geographic Information System (GIS) techniques, to interpret savanna ecosystem patterns in the Sabi Sand Game Reserve, Mpumalanga province
- Authors: Fortescue, Alexander Kenneth John
- Date: 1997
- Subjects: Sabi-Sand Game Reserve (South Africa) , Savanna ecology -- South Africa -- Mpumalanga , Geographic information systems , Savanna ecology -- Remote sensing
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4857 , http://hdl.handle.net/10962/d1005533 , Sabi-Sand Game Reserve (South Africa) , Savanna ecology -- South Africa -- Mpumalanga , Geographic information systems , Savanna ecology -- Remote sensing
- Description: This thesis explores techniques which ultimately strive to optimize production systems in rangeland areas of southern Africa. By linking spatially significant, satellite derived data to practical measurements of vegetation structure, valuable insight has been derived on processes of ecosystem function, in the Sabi Sand Game Reserve. A broad ecosystem response mechanism has been established from a conventional Normalized Differentiation Vegetation Index (NDVI). By responding to increases in production, which are driven by disturbance, this index has allowed quantitative systems theory in savanna to be tested and refined. Methods of biomass and production estimation which are specifically designed to reduce the cost and time involved with the more conventional method of destructive harvesting have been tested in the savanna at the Sabi Sand Game Reserve. Results from these estimates relate well with data derived through destructive harvesting in structurally similar savanna. Moreover, by relating the above-ground woody production estimates to remere sensing indices, it was possible to demonstrate that the problem of extrapolation, universal to most biomass and production studies can be overcome. Since remote sensing encompasses an array of tools fundamental to rangeland inventory, monitoring and management, valuable spatially significant information pertaining to ecosystem structure and function has been provided for managers in the Sabi Sand Game Reserve.
- Full Text:
- Date Issued: 1997
The development potential of Kwazulu-Natal aquifers for rural water supply
- Authors: King, Georgina
- Date: 1997
- Subjects: Aquifers -- South Africa -- KwaZulu-Natal , Water-supply, Rural -- South Africa -- KwaZulu-Natal , Hydrology -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4938 , http://hdl.handle.net/10962/d1005550 , Aquifers -- South Africa -- KwaZulu-Natal , Water-supply, Rural -- South Africa -- KwaZulu-Natal , Hydrology -- South Africa
- Description: The supply of water to 'disadvantaged' areas of KwaZulu-Natal has in the past received low priority. Local government is now faced with supplying water to large, sometimes dispersed, rural populations. Groundwater has been utilised informally as a water supply for some years, but the impetus provided by the Department of Water Affairs and Forestry's White Paper has compelled those responsible for water supply to seriously consider groundwater as a sustainable option. The development potential or success of groundwater in its role as a reliable water supply is dependent on acceptance of the resource by the communities, appropriate level of service, yield sustainability and safe quality. Apart from the social aspects, the yield and groundwater quality characteristics of the aquifers under consideration must be used to determine the best hydrogeological features to target during exploration. A total of 993 borehole records, from a recent government drought relief programme, were used to compare the yield, water quality and best geophysical exploration and drilling techniques of the main hydrolithologies in rural KwaZulu-Natal. The results of comparative analysis shows that the competent rocks of the Natal Group and Natal Metamorphic Province and the karstic Uloa Formation of the Maputaland Group have the best overall potential for water supply. The unconsolidated sediments of the Maputaland Group also have good potential, but have some salinity problems. The Karoo Supergroup sediments and volcanics have moderate potential, with the argillaceous rocks having the worst potential of the Karoo rocks. The contacts between the Ecca Group shales and sandstone have the best potential of the Karoo Supergroup sedimentary hydrolithologies. Fractures clearly enhance the groundwater potential of most hydrolithologies, with fractured Dwyka Group tillites rated as having one of the best development potentials of all the hydrogeological targets in KwaZulu-Natal, despite the hydrolithology's poor water-bearing characteristics. Dolerite contacts with sedimentary rocks are commonly targeted features in groundwater development. However, the results from this research showed that, apart from the Natal Group's contact with dolerite, these targets have poor development potential. In general, contacts between different hydro lithologies. Health related quality was found to be adversely affected in argillaceous hydrolithologies, such as the majority of Karoo rocks which had high levels of sodium and chloride and Natal Metamorphic Province schists which had elevated sodium, chloride and fluoride. Crystalline and arenaceous hydrolithologies generally exhibited good quality groundwater. A comparison between the different geophysical methods for each target feature indicates that there are appropriate methods to use to detect anomalies related to water-bearing features. The large number of dry boreholes drilled in locations with recorded geophysical anomalies can be either a function of the water-bearing characteristics of the formation, human error or background noise. The cost of using the different geophysical methods vary considerably. The order of increasing cost is magnetics, VLF, EM-34, electrical resistivity profiling followed by vertical electrical sounding. Drilling has a large influence on the development potential of certain aquifers due to the high costs involved. Most of the secondary aquifers will require percussion drilling which is the cheapest method of drilling commonly used. Some very unstable formations within fractured or highly weathered rock may need ODEX drilling to enable drilling to advance. ODEX drilling in these conditions is very costly and can double the cost of drilling compared to air percussion. The unconsolidated sediments of the Maputaland Group can only be drilled by mud rotary or ODEX techniques. The relative costs of these two methods arer very similar with ODEX being slightly cheaper. Because of the high expense of drilling in the sands it is recommended that alternative sources, possibly from shallow hand-dug wells, be considered as appropriate methods of accessing groundwater. The aspects of groundwater yield and quality of aquifers, appropriate geophysical siting and drilling methods, together with social considerations will all contribute to the success of groundwater development in rural KwaZulu-Natal.
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- Date Issued: 1997
The biology of two important by-catch skate species on the Agulhas Bank, South Africa
- Authors: Walmsley, Sarah Ann
- Date: 1997
- Subjects: Skates (Fishes) -- South Africa -- Physiology
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5240 , http://hdl.handle.net/10962/d1005083 , Skates (Fishes) -- South Africa -- Physiology
- Description: Members of the family Rajidae are common components of the demersal trawl fishery, contributing around 1% to the total catch. However, apart from a single species all South African rajids are currently discarded. With demands for new protein sources ever-increasing, it is possible that currently underutilised species, such as the skates will be utilized to a greater extent. Raja wallacei and R.pullopunctata are common trawler by-catch species, ranging along most of the South African coast. The current study allred to further knowledge on the population biology of both species through age and growth, reproductive and feeding studies. The study also allred to assess whether any of the South African skate species show the potential for utilization as a food source. Band counts of vertebral centra were used to determine growth parameters and generate growth curves for males and females of both species. Growth was significantly different between the sexes. In both cases, females grew slower than males but reached a greater asymptotic disc width. As with other elasmobranchs, R.wallacei and R.pullopunctata are long-lived and slow growing. As with all other skates, the study species are oviparous laying large, yolked eggs in tough, leathery cases on the sea bed. The onset of maturity occurs at a large size (approximately 400mm disc width (10-11 years of age) for R.wallacei and 600mm disc width (12-13 years of age) for Rpullopunctata) and is very rapid. The oldest R.wallacei and R.pullopunctata observed were 16 and 18 years of age, respectively. No distinct breeding season was determined and no nursery areas were observed. A large proportion of individuals, especially R.pullopunctata was immature. Both species fed primarily on crustaceans and teleosts with an ontogenetic shift in diet from mysids, amphipods, isopods and bregmatocerids to larger Gnathophis sp., Mursia cristimanus and carid shrimps. Large discrepancies were seen in the diet of animals spatially, temporally and between research and commercially-caught animals. Disc-width frequency data was limited but suggested that both species show preference for depths of 100-300m. Size distribution did not appear to be affected by depth, although the data set was limited. A paucity of large individuals in the catch may indicate that stocks are suffering from growth overfishing by trawling operations. Historical and observer data showed that although skates are common components of the by-catch, the potential for greater use is limited. The biscuit skate, R.straeleni, on the west coast is the only species that could be better utilized. If skates are treated as a single group the potential is increased but this causes problems in assessing stocks.
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- Date Issued: 1997
The application of a landscape diversity index using remote sensing and geographical information systems to identify degradation patterns in the Great Fish River Valley, Eastern Cape Province, South Africa
- Authors: Tanser, Frank Courteney
- Date: 1997
- Subjects: Geographic information systems , Earth sciences -- Remote sensing , Environmental degradation -- South Africa -- Eastern Cape -- Great Fish River Valley , Forest degradation -- South Africa -- Eastern Cape -- Great Rish River Valley
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4814 , http://hdl.handle.net/10962/d1005488 , Geographic information systems , Earth sciences -- Remote sensing , Environmental degradation -- South Africa -- Eastern Cape -- Great Fish River Valley , Forest degradation -- South Africa -- Eastern Cape -- Great Rish River Valley
- Description: Using a range of satellite-derived indices I describe. monitor and predict vegetation conditions that exist in the Great Fish River Valley, Eastern Cape. The heterogeneous nature of the area necessitates that the mapping of vegetation classes be accomplished using a combination of a supervised approach, an unsupervised approach and the use of a Moving Standard Deviation Index (MSDI). Nine vegetation classes are identified and mapped at an accuracy of 84%. The vegetation classes are strongly related to land-use and the communal areas demonstrate a reduction in palatable species and a shift towards dominance by a single species. Nature reserves and commercial rangeland are by contrast dominated by good condition vegetation types. The Modified Soil Adjusted Vegetation Index (MSA VI) is used to map the vegetation production in the study area. The influence of soil reflectance is reduced using this index. The MSA VI proves to be a good predictor of vegetation condition in the higher rainfall areas but not in the more semi-arid regions. The MSA VI has a significant relationship to rainfall but no absolute relationship to biomass. However, a stratification approach (on the basis of vegetation type) reveals that the MSA VI exhibits relationships to biomass in vegetation types occurring in the higher rainfall areas and consisting of a large cover of shrubs. A technique based on an index which describes landscape spatial variability is presented to assist in the interpretation of landscape condition. The research outlines a method for degradation assessment which overcomes many of the problems associated with cost and repeatability. Indices that attempt to provide a correlation with net primary productivity, e.g. NDVI, do not consider changes in the quality of net primary productivity. Landscape variability represents a measure of ecosystem change in the landscape that underlies the degradation process. The hypothesis is that healthy/undisturbed/stable landscapes tend to be less variable and homogenous than their degraded heterogenous counterparts. The Moving Standard Deviation Index (MSDI) is calculated by performing a 3 x 3 moving standard deviation window across Landsat Thematic Mapper (TM) band 3. The result is a sensitive indicator of landscape condition which is not affected by moisture availability and vegetation type. The MSDI shows a significant negative relationship to NDVI confirming its relationship to condition. The cross-classification of MSDI with NDVI allows the identification of invasive woody weeds which exhibit strong photosynthetic signals and would therefore be categorised as good condition using NDVI. Other ecosystems are investigated to determine the relationship between NDVI and MSDI. Where increase in NDVI is disturbance-induced (such as the Kalahari Desert) the relationship is positive. Where high NDVI values are indicative of good condition rangeland (such as the Fish River Valley) the relationship is negative. The MSDI therefore always exhibits a significant positive relationship to degradation irrespective of the relationship of NDVI to condition in the ecosystem.
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- Date Issued: 1997
Structural and stereochemical investigations of terrestrial and marine pyrone metabolites
- Authors: Collett, Lynne Alison
- Date: 1997
- Subjects: Metabolites , Stereochemistry , Siphonaria
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4348 , http://hdl.handle.net/10962/d1005013 , Metabolites , Stereochemistry , Siphonaria
- Description: This thesis presents an investigation into the chemistry of 6 substituted 5, 6-dihydro-a-pyrone compounds. A comprehensive review of these compounds was published in 1989 and the subsequent literature is covered in an updated review presented below. Eight 6-substituted 5,6-dihydro-a-pyrone metabolites from three different South African plant species Cryptocarya latijolia, Syncolostemon densiflorus, and Syncolostemon argenteus have been the subject of structural and stereochemical investigations. The absolute stereochemistry of the known compound "triacetate" from C. latijolia has been established as 6R-[2R,4S,6S-(triacetyloxy)heptylJ-5,6-dihydro-2H-pyran-2-one (74) using CD and acetonide formation with subsequent application of the modified Moshers method. The absolute stereochemistry of the related metabolite "diacetate", also from C. latijolia, has been assigned as 6R-[2S,4S-diacetyloxypentylJ-5,6-dihydro-2H-pyran-2-one (76). In addition, the outstanding stereochemistry at C-5' in syndenolide, from S. densiflorus, followed from conversion to its diacetonide and subsequent NMR analysis. Syndenolide is therefore 6R-[5S-(acetoxy)-IR,2R,3S-(trihydroxy)-heptylJ-5,6- dihydro-2H -pyran-2-one. The genus Syncolostemon has proved to be a rich source of a-pyrone compounds and the chemistry of S. argenteus, not investigated previously, was examined as part of an ongoing search for new 5,6-dihydro-a-pyrones. The study yielded five new a-pyrone natural products, synargentolide A-E. The structure of synargentolide A (82) has been assigned as 6R[4R,5R,6S-triacetyloxy-lE-heptenylJ-5,6-dihydro-2H-pyran-2-one using CD and NMR techniques. The structures of synargentolide B (87), C (92) and E (94) also followed from a detailed NMR analysis and the stereochemistry tentatively assigned based on CD and NMR data. Synargentolide D (93) was thermally unstable, and a paucity of material prevented stereochemical investigations, however the structure was determined from initial NMR analysis. The marine molluscs of the genus Siphonaria have only become the subject of chemical studies in the last fifteen years. These molluscs characteristically produce polypropionate type natural products. A review of Siphonarian polypropionate metabolites containing a pyrone functionality is presented. Examination of an endemic South African species Siphonaria serrata yielded one novel polypropionate metabolite containing a ),-pyrone functionality, siserrone A (131). The structure of this compound was unambiguously established using standard NMR experiments. The relative stereochemisty of the hemi-ketal moiety was assigned from a careful analysis of the ROESY NMR spectrum and the stereochemisty of the acyclic portion determined from a comparison of the 13C and 'H NMR data of a degradation product with the corresponding data of a synthetic compound. It was also established that the modified Moshers method could not be used to determine the absolute stereochemistry of the secondary hydroxy I substituent at C-11. The absolute stereochemistry of 131 was thus assigned in accordance with the proven stereochemistry of Siphonarian metabolites.
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- Date Issued: 1997
Periglacial features in the vicinity of Tiffindell Ski Resort, North East Cape Drakensberg, South Africa, and their implications for the development of the resort
- Authors: Kück, Karen Melody
- Date: 1997
- Subjects: Tiffindell Ski Resort (South Africa) , Slopes (Physical geography) -- South Africa -- Eastern Cape , Landforms -- South Africa -- Eastern Cape , Climatic geomorphology -- South Africa -- Eastern Cape , Drakensberg Mountains
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4844 , http://hdl.handle.net/10962/d1005520 , Tiffindell Ski Resort (South Africa) , Slopes (Physical geography) -- South Africa -- Eastern Cape , Landforms -- South Africa -- Eastern Cape , Climatic geomorphology -- South Africa -- Eastern Cape , Drakensberg Mountains
- Description: This thesis provides a description of the periglacial environment and features in the vicinity of Tiffindell Ski resort, on the slopes of Ben MacDhui (3001.2m.), the highest point of the East Cape Drakensberg, South Africa. Active and inactive periglacial features were located, mapped and described. Of particular interest were periglaciar slope deposits including gelifluction turf-banked lobes and stone lobes, and cryoturbation features including polygons and thufur. Local environmental factors, such as aspect, moisture, topography, soil texture and depth of freezing, appear to act as important controls on the spatial distribution of the periglacial features. Identification and quantification of periglacial processes in the regolith was investigated using temperature and soil moisture sensors coupled to dataloggers. Research was undertaken over a 16 month period from June 1995 to September 1996 so that comparisons between the winter conditions of 1995 and 1996 could be drawn. The Tiffindell area was observed to be characterised in the winter months by 'diurnal freezethaw days', as well as by 'ice days', 1996 experiencing colder temperatures than 1995. With more than 78% of the days from May to September 1996 being 'ice days', and simultaneously experiencing high soil moisture contents, freezing penetration to a depth of greater than 0.2m was observed to occur in the Tiffindell area, causing frost heave and gelifluction. The summer thaw of ice lenses that developed in the cold winter months caused surface movement downslope of gelifluction lobes of up to 39mm over an 18 month period, although movement declined rapidly with depth and was essentially restricted to the uppermost 130mm of the regolith. Other features such as sorted and non-sorted polygons and thufur were identified and found to be active under the present climatic conditions and depth of frost penetration at Tiffindell. Stone lobes were identified on the south and southeast-facing slopes at Tiffindell, but are apparently inactive under present climatic conditions. Their existence suggests the presence of severe seasonal frost in the past. The implications of the air and ground surface temperatures, and of seasonal frost penetration for the development of Tiffindell Ski resort were considered, and suggestions regarding their economic significance are presented.
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- Date Issued: 1997
Macroinvertebrate community and species responses to chlorinated sewage effluent in the Umsunduze and Umbilo rivers, Kwa Zulu-Natal, South Africa
- Authors: Williams, Margot Lluttrell
- Date: 1997
- Subjects: Sewage -- Environmental aspects -- South Africa -- KwaZulu-Natal , Sewage -- Purification -- Chlorination -- South Africa -- KwaZulu-Natal , Baetis -- South Africa -- KwaZulu-Natal , Mayflies -- South Africa -- KwaZulu-Natal , Chlorine -- Environmental aspects -- South Africa -- KwaZulu-Natal
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5727 , http://hdl.handle.net/10962/d1005413 , Sewage -- Environmental aspects -- South Africa -- KwaZulu-Natal , Sewage -- Purification -- Chlorination -- South Africa -- KwaZulu-Natal , Baetis -- South Africa -- KwaZulu-Natal , Mayflies -- South Africa -- KwaZulu-Natal , Chlorine -- Environmental aspects -- South Africa -- KwaZulu-Natal
- Description: Chlorine has a wide variety of applications in water treatment. Because of its disinfectant efficacy, it is used world wide for the treatment of potable water, sewage, swimming pools and for the control of nuisance organisms in cooling towers. A problem arises when such chlorinated water enters the natural environment, as chlorine's greatest advantage, i.e. its germicidal capacity, becomes its greatest disadvantage. In particular, the discharge of heated, chlorinated water from cooling towers and chlorinated, treated sewage into rivers have severe consequences for the riverine flora and fauna. This study focused on the effects of chlorinated, treated sewage effluent on the community structure of benthic macroinvertebrates in two rivers in KwaZulu-Natal viz. the Umsunduze River in the Pietermaritzburg area, and the Umbilo River in the Durban area. The study was conducted in three phases. The first two phases comprised a toxicological investigation of the effects of chlorine on a selected riverine macroinvertebrate, and the third phase comprised an ecotoxicological investigation of the effects of chlorinated treated sewage on benthic macroinvertebrate community structure. The first phase of the study involved the development of an artificial stream system which would be suitable for determining the response of a selected macroinvertebrate species to chlorine. Chlorine is both reactive and volatile, so this necessitated the development of a specialised flow-through system with apparatus which would allow continuous dosing of a sodium hypochlorite solution. The system was set up at the Process Evaluation Facility at Wiggins Waterworks, Durban, where raw water from lnanda Dam was used. The second phase involved the use of this artificial stream system to conduct acute 96 h toxicity tests. Baetid mayfly nymphs (Baetis harrisoni Barnard) were selected as the test organisms after a preliminary investigation found them to be suitable for survival under laboratory conditions. For comparative purposes, tests were run first on B. harrisoni from a relatively uncontaminated stream in a residential area of Westville, then on specimens from the severely impacted Umbilo River. The LC₅₀ of chlorine for organisms from both sources was found to be in the region of 0.004 mg/l (free chlorine). This value was well below the general effluent standard of 0.1 mg/l in effect at the time. The recommended acute environmental guideline is 0.001 mg/l. The third phase of the study involved field validation of the toxicity test results. It was hypothesised that since the LC₅₀ for free chlorine was 0.004 mg/l, B. harrisoni would not be found downstream from a point source of chlorinated effluent where the concentration of free chlorine ranged from 0.06 to 0.2 mg/l, and that the macroinvertebrate community structure would also be altered. In order to test these hypotheses, benthic macro invertebrate community structure was investigated at several sites up- and downstream from the outlets of the Darvill Wastewater Works in the Umsunduze River and the Umbilo Sewage Purification Works in the Umbilo River. In addition, in order to differentiate between the effects of chlorinated and unchlorinated treated sewage, a section of the Umbilo River (upstream from the chlorinated discharge) was exposed to unchlorinated, treated sewage. In this way, a limited "before and after" sewage and an "upstream and downstream" from sewage investigation could be carried out. Organisms were collected from riffles (and from pools in the Umbilo River) and the samples were then sorted and organisms were identified to species level, where possible, otherwise to genus or family. Changes in community composition were shown graphically as pie charts of relative proportions of organisms found at each site, graphs of the average number of taxa at each site; and graphs of the average number of individuals at each site; Data from the Umbilo River were also analysed using TWINSPAN (Two-way indicator species analysis). In both the Umsunduze and the Umbilo rivers, the deleterious effects of the chlorinated effluent were clearly evident. At Umsunduze Site 3 and Umbilo Site 5 (both immediately downstream from the chlorinated effluent) both the number of taxa and number of individuals were substantially reduced, sometimes to zero. Where organisms were found at the next sites downstream (Sites 4 and 6 respectively), the samples were dominated by Chironomus. In contrast, the unchlorinated effluent in the Umbilo River caused very little difference in community structure. As predicted, B. harrisoni was not found in downstream samples in which chlorine was present, yet appeared to be relatively unaffected by the unchlorinated effluent, suggesting that chlorine, rather than the effluent was responsible for its absence at downstream sites. In conclusion, it would appear that while treated sewage effluent certainly causes changes in macroinvertebrate community structure, chlorination of this effluent leads to large scale destruction of the riverine community. This in turn delays the recovery process of the river, rendering a longer stretch unfit for use. The consequences of this delayed recovery are that the failure to meet the water quality requirements of the natural environment results in those of the other water users (agriculture, industry, domestic and recreation) not being met. This reduces the natural capacity of the riverine community to process organic waste and recover from the discharge of sewage effluent. Chlorination increases the distance of impaired water quality and environmental integrity which result from organically enriched treated sewage effluent. The results of the study indicated that the draft water quality guidelines for aquatic ecosystems, derived from inadequate data, and calculated with a safety factor, were the correct order of magnitude. The approach followed in the study will be useful in the development and refinement of water quality guidelines for aquatic ecosystems.
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- Date Issued: 1997
Isolation and identification of Beta-Lactam Producing Microorganisms using PCR based methodologies
- Authors: Krallis, Myrsini
- Date: 1997
- Subjects: Polymerase chain reaction , Bacterial genetics , Fungi -- Genetics , Beta lactam antibiotics , Microbial enzymes
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4155 , http://hdl.handle.net/10962/d1018237
- Description: The polymerase chain reaction (PCR) was investigated as a potential tool in microbial screening for 13-lactam. producing organisms. Optimization of PCR conditions and the addition of acetamide to the PCR reaction allowed for the successful amplification of the isopenicillin N synthetase (lPNS) gene in S. clavuligerus, S. tanashiensis, S. griseus, S. olivaceus, S. lipmanii, and S. chartreusis. PCR was used to produce a radiolabelled probe from S. clavuligerus that was used to detect analogous genes in bacteria and fungi. Southern blot and dot blot analysis using the lPNS probe revealed the presence of IPNS-like sequences in seventeen organisms. Fourteen of these sequences belonged to known 13-lactam. producing organisms; one unidentified soil isolate; and two non-/3-lactam. producing organisms viz. S. venezuelae ATCC 10712 and S. hygroscopicus ATCC 21703. The lPNS gene was also detected in a 13-lactam producer (S. chartreusis) that had lost its ability to produce antibiotic. It would therefore have been overlooked in a conventional antibiotic screening program. The use of PCR, coupled with Southern hybridization and dot blot analysis, increased the sensitivity and specificity of the antibiotic screening procedures and allowed for the investigation of evolutionary relationships between the eukaryotes and the prokaryotes. A preliminary investigation into the potential use of RAPD PCR and protein fmgerprinting as tools for solving discrepancies in streptomycete identification was conducted. A variety of streptomycete species that were chosen as being representative of a number of numerical taxonomic classes were amplified using various RAPD primers. Streptomycetes appear to be genetically diverse organisms as was reflected by their RAPD and protein profiles. The application of PCR in an antibiotic screening program showed great potential as a specific and sensitive tool in the detection of /3-lactam producers and in the elimination of duplicate strains.
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- Date Issued: 1997
Investigations into the larval rearing of two South African sparid species
- Authors: Davis, Jerome Adam
- Date: 1997
- Subjects: Sparidae
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5293 , http://hdl.handle.net/10962/d1005138 , Sparidae
- Description: The most significant bottleneck to the development of marine finfish culture is a reliable production of juveniles for growout. This is due to the small size at hatch and delicate nature of the pelagic larvae produced by most commercially desirable species. However, over the last 30 years, improved larviculture techniques have been developed to the extent that many species are being successfully cultured worldwide. These techniques were applied to two endemic species as a preliminary step towards establishing marine finfish aquaculture in South Africa. Adult roman Chtysoblephus laticeps and carpenter Argyrozona argyrozona (Pisces: Sparidae) were caught in the Tsitsikamma National Park. Both species responded to injection with pituitary extract, HCG and LHRHa, and were succesfully stripped up to 48 hours after injection. Fish were stripped twice, the second stripping producing better quality eggs. Chyrysoblephus laticeps also spawned naturally after injection with LHRHa. The fertilised eggs were incubated and the larvae reared in a fully recirculating seawater system. One batch of A. argyrozona and three batches of C. laticeps were reared through metamorphosis on a diet of enriched rotifers and Anemia, and inert foods, following commonly used rearing procedures. Both species followed developmental patterns of other cultured larvae, displaying typical critical stages; high mortalities at first-feeding and cannibalism from 26-30 days after hatch resulted in survival rates ranging from 0.1-0.5%. Growth, survival, size of gape at first-feeding, and ease of weaning onto an inert diet of C. laticeps was comparable to other species being reared for the first time, indicating some potential as a candidate species. The numbers of A. argyrozona larvae reared were insufficient to make comparisons with other studies. The adults also proved to be susceptible to physical damage while in captivity and were, therefore, considered unsuitable for aquaculture. The thesis describes the spawning procedure, the systems developed and the larval rearing process. The critical stages of first-feeding, swim bladder inflation, settlement and cannibalism are discussed and the development of the larvae described. The ontogeny of both species is described in detail. Both species displayed typical sparid developmental patterns, but differed with respect to pigmentation, head spination and morphometrics.
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- Date Issued: 1997
Investigations into the dietary protein requirements of juvenile spotted grunter, Pomadasys commersonnii (Haemulidae : Pisces)
- Authors: Irish, Abigail
- Date: 1997
- Subjects: Fishes -- Nutrition , Pomadasys -- Nutrition , Grunts (Fishes) -- Nutrition
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5292 , http://hdl.handle.net/10962/d1005137 , Fishes -- Nutrition , Pomadasys -- Nutrition , Grunts (Fishes) -- Nutrition
- Description: The proximate composition of juvenile spotted grunter, Pomadasys commersonnii and their major prey items were analyzed to test the hypothesis that the dietary protein requirements would approximate the composition of the natural diet. The amino acid profile of juvenile P. commersonnii was analyzed to establish the pattern of limiting amino acids for this species. Juvenile P. commersonnii feed primarily on the mysid, Mesopodopsis slabberi, which has a protein content of 58.27±0.04% and a calorific value of 19.2kJ/g. The first-limiting essential amino acid for this fish was found to be lysine and it was predicted that the optimal dietary protein requirement would be between 50 and 60%. The optimal dietary protein inclusion level was investigated by feeding semi-purified diets containing graded levels of protein, ranging from 37-62%. Maximum growth was found to occur at dietary protein levels ranging from 40-51%. The best food conversion ratio was achieved at 56% dietary protein and the best protein efficiency ratio was obtained at a dietary protein inclusion level of 37-40%. The protein to energy ratio was defined by feeding 3 different protein levels at 3 different P:E levels. These semi-purified diets contained 35, 45 or 55% protein and 6, 8 or 12% dietary lipid, resulting in protein to energy ratios ranging from 21.1 to 42.3mg/kJ. The optimal P:E ratio for this species was found to be 26.7mg/kJ. This diet effected a low food conversion ratio (1.72±0.19), a low hepatosomatic index (4.01±0.23) and a high specific growth rate (5.96±0.36). The essential amino acid requirements of juvenile P. commersonnii were investigated. Semi-purified diets were formulated to contain graded levels of crystalline lysine based on the amino acid profile of the whole body and fed to the fish for a period of 60 days. Fish fed the "ideal protein" diet had significantly higher (p<0.05) specific growth rates (2.95±0.18), protein efficiency ratios (0.41±0.05) and significantly lower (p<0.05) food conversion ratios (3.02±0.29). Lysine levels in the whole body increased with increasing levels of supplemented lysine. The dietary requirement of lysine was found to be 4.30% of dietary protein. The crude protein digestibility of six protein sources was investigated. Diets were prepared with 1% chromic oxide as an internal marker. The tested protein sources included low temperature Danish fishmeal, steam dried Chilean fishmeal, blood meal, carcass meal, defatted soyabean meal and Spirulina meal. These potential fishmeal substitutes were selected due to their favourable amino acid profiles, and in particular their high levels of lysine, and their high protein content. Both the animal and the plant protein sources were highly digestible. Digestibility co-efficients ranged from 66.09% for Spirulina meal to 73.38% for low temperature Danish fishmeal. The results have shown that juvenile spotted grunter require a minimum of 40% crude protein in their diet, a P:E ratio of 26.7mg/kJ and a lysine concentration of 4.30% of the dietary protein. Long term growth trials are needed to confirm these results. The hypothesis that the proximate composition of the natural diet, and the proximate composition of the animal under investigation, provides a reliable indication of the animals' nutritional requirements was shown to be valid. Differences between the predicted, and the empirically determined optimal protein and protein:energy ratios were slight.
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- Date Issued: 1997
Guidelines for assessing single borehole yields in secondary aquifers
- Authors: Murray, Eric Charles
- Date: 1997
- Subjects: Aquifers -- Measurement
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:6026 , http://hdl.handle.net/10962/d1005512
- Description: The motivation for this research project arose from the realisation that many South African rural water supply schemes fail due to the over abstraction of groundwater from single boreholes. The main reason for this mis-management of groundwater is a result of inappropriate borehole yield recommendation methods. This research project set out to review existing borehole yield assessment methods and establish new methods which take the shortcomings of existing methods into account. The study is concerned with borehole yield assessment methods applicable to secondary aquifers, since these aquifers are by far the most common in South Africa. The yield assessment methods have been grouped into those that are based on aquifer yield analyses, and on the analysis of single borehole test pump data. In order to assess which methods give suitable yield recommendations, it was necessary to compare the yields obtained using the various methods, with established yields from production boreholes. The focus of the aquifer yield component of the study, was to develop a method for estimating the proportion of recharge that can be abstracted from a single borehole located in a relatively small aquifer. The method was developed by computer simulations of aquifers with different hydraulic properties, and by establishing a formula which describes the relationship between recharge and the abstractable proportion of recharge. Under specific hydrogeological conditions, the recharge based method proved to be reliable in relation to established yields from production boreholes. Of the borehole yield assessment methods based on the analysis of test pump data, none of the existing methods proved to be reliable. However, the yields obtained using the two newly developed methods compared favourably to the established yield of existing production boreholes. Both of these methods are based on the application of the Cooper-Jacob approximation of the Theis equation. This study reviews existing methods and presents newly developed methods for recommending borehole abstraction rates in secondary aquifers. While existing borehole yield assessment methods were found to be unreliable, some of the newly developed methods, if correctly applied, give acceptable yield recommendations.
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- Date Issued: 1997
Generalisations of filters and uniform spaces
- Authors: Muraleetharan, Murugiah
- Date: 1997
- Subjects: Filters (Mathematics) , Uniform spaces
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5409 , http://hdl.handle.net/10962/d1005223 , Filters (Mathematics) , Uniform spaces
- Description: The notion of a filter F ∈ 2²x has been extended to that of a : prefilter: ƒ ∈ 1²x, generalised filter ƒ ∈ 2²x x and fuzzy filter ᵩ ∈ 1¹x. A uniformity is a filter with some other conditions and the notion of a uniformity D ∈ 2²xxx has been extended to that of a : fuzzy uniformity d ∈ 1²xxx , generalised uniformity ∈ 1²xxx and super uniformity b ∈ 1¹x. We establish categorical embeddings from the category of uniform spaces into the categories of fuzzy uniform spaces, generalised uniform spaces and super uniform spaces and also categorical embeddings into the category of super uniform spaces from the categories of fuzzy uniform spaces and generalised uniform spaces.
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- Date Issued: 1997
Fungal and substrate-associated factors affecting lignocellulolytic mushroom cultivation on wood sources available in South African [i.e. Africa]
- Authors: Da Serra, Maria Fatima
- Date: 1997
- Subjects: Lignocellulose , Mushroom culture , Cultivated mushroom , Fungi -- Cultures and culture media , Fungi -- Biotechnology , Mushroom culture -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4020 , http://hdl.handle.net/10962/d1004080 , Lignocellulose , Mushroom culture , Cultivated mushroom , Fungi -- Cultures and culture media , Fungi -- Biotechnology , Mushroom culture -- South Africa
- Description: Vast- quantities of lignocellulosic materials, representing potential substrates for the cultivation of speciality mushrooms, are produced annually in South Africa. A number of these materials are derived as waste products of the timber and agricultural industries, e.g. Maranti (Shorea spp.) and Port Jackson Willow (Acacia longifolia) respectively. The screening of various wood-degrading fungi, which are cultivated worldwide for their production of speciality mushrooms, indicated that under the environmental conditions considered, certain species were adapted to cultivation on these lignocellulosic wastes (Pleurotus species) whereas others were not (Lentinus edodes and Flammulina velutipes). Furthermore, intra- and interspecies specific differences in the growth and production potential of the various lignocellulolytic fungi investigated on synthetic and natural medium were discovered. Biochemical and genetical investigations of these strains indicated differences between and within species which were often significant. Species varied qualitatively and quantitatively in the lignocellulolytic enzymes produced, which was loosely correlated with productivity on the different media investigated. Genetical studies, using RAPD fingerprinting, indicated that the Pleurotus genus is highly variable which supports the observed differences in growth, yield and enzymatic activity between different strains and species.
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- Date Issued: 1997
Extracellular digestion in two intertidal mussels and the role played by their gut bacteria
- Authors: Simon, Carol Anne
- Date: 1997
- Subjects: Perna -- Digestive organs , Mussels -- Digestive organs , Spirochaeta
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5692 , http://hdl.handle.net/10962/d1005378 , Perna -- Digestive organs , Mussels -- Digestive organs , Spirochaeta
- Description: The intertidal mussels. Perna perna and Choromytilus meridionalis co-occur on the southern coast of South Africa. Mussels ingest mixtures of bacteria. phytoplankton. zooplankton and detritus. with proportions varying according to availability. These bivalves filter similar-sized particles. which might result in interspecific competition. Carbohydrate-digesting enzymes of the mussels and their enteric bacteria. and bacteriolytic enzymes of the mussels were therefore examined to elucidate feeding ecology in these animals at an enzymatic level. Style enzymes of both species digested the storage carbohydrates amylose glycogen and laminarin, and the structural carbohydrate carboxymethyl cellulose (CMC). Differential rates of digestion of these carbohydrates suggests that Perna perna relies more on plankton (and possibly bacteria) than on detritus for food while Choromytilus meridionalis relies equally on all components of the seston. There may therefore be some degree of resource partitioning of the seston. The styles of P.perna had a lower specific enzyme activity. but higher protein content than those of C.meridionalis. P.perna could therefore release more glucose from a given concentration of substrate than C.meridionalis. The gut contents and tissue were examined microscopically to determine where the bacterial colonisation sites were. Bacteria were associated primarily with the gut contents but not the gut walls. of both species. The styles housed spirochaete bacteria (Crislispira sp), Perna perna housed large numbers of one species. while Choromytilus meridionalis had lower numbers of two species. Levels of infection differed between species and localities. Enteric (but not style) bacteria of Perna perna and Choromytilus meridionalis always digested the same carbohydrates as the mussels as well as the structural carbohydrates mannan and fucoidan. Activity was erratic on the structural compounds, carageenin and xylan, and absent on alginic acid or inulin. Activity on the storage carbohydrates by enteric bacteria from C.meridionalis was higher than by those from P.perna. This is probably related to the larger bacterial populations housed by C.meridionalis than by P.perna. Bacteriolytic activity by the digestive enzymes of Pema perna was higher than for Choromytilus. In P.perna it was due to a combination of different enzymes one of which is a true lysozyme. C.meridionalis did not produce a true lysozyme. Enzymes produced by the mussels and their enteric bacteria allow the mussels to utilise all components of the seston. Low endogenous enzyme activity by Choromytilus meridionalis, coupled with the high activity by its enteric bacteria, suggests that they rely more on bacterial activity to meet their dietary requirements than does Perna perna. The ability of enteric bacteria to digest carbohydrates which the mussels cannot indicates that the bacteria are endosymbiotic, although the sporadic nature of activity of some of the enzymes, and the fact that bacteria are associated with the gut contents, indicates that the relationship is only incidental.
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- Date Issued: 1997
Exploitation of the bait organism Upogebia africana (Crustacea: Anomura) in the Knysna estuary
- Authors: Cretchley, Robyn
- Date: 1997
- Subjects: Upogebia africana -- South Africa -- Knysna , Mud shrimps -- South Africa -- Knysna , Fishing baits -- South Africa -- Knysna
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5691 , http://hdl.handle.net/10962/d1005377 , Upogebia africana -- South Africa -- Knysna , Mud shrimps -- South Africa -- Knysna , Fishing baits -- South Africa -- Knysna
- Description: In South African estuaries the anomuran mud prawn, Upogebia africana (Ortmann), is the main organism exploited as bait by recreational and subsistence anglers. In the Knysna estuary, three groups of bait collectors were identified on the basis of their source of income: subsistence fishermen who rely on bait-collecting and fishing for their income, supplementary anglers who catch fish to supplement their income and leisure anglers who draw no income from fishing. Two groups were identified based on the methods used: lelsure anglers who collect bait using a prawn pusher or pump and fish using a fishing rod and tackle, and non-leisure anglers who collect mud prawns using tin cans and fish with handlines. The hypothesis was erected that bait-collecting does not affect the U africana populations in the Knysna estuary. The approach adopted was to assess the distribution, density, population structure and reproductive patterns of the bait stock and to estimate the intensity of bait collection, to test the validity of the hypothesis. U africana has an extensive distribution, occupying 62 % of the available intertidal area of the Knysna estuary. Mud prawns have a broad intertidal distribution from the high water level (Spartina zone) to the shallow subtidal. The density, biomass and population structure of the mud prawns vary significantly with distance up the estuary and with tidal height on each shore. The Invertebrate Reserve supports very low densities of U africana (x = 11.7 m⁻²), whereas a relatively inaccessible centre bank in the middle reaches of the estuary appears to be a very effective natural mud prawn reserve as it supports the highest densities (x = 176.5m⁻²). The mud prawn stock of the estuary is estimated to be 2.19 x 108 prawns (82.7 tonnes dry mass). The numbers of bait collectors present per mudbank is highest on public holidays (x = 34) and higher during the summer holidays (x = 16) than during the winter (x = 4). A total of 1.858 x 106 U africana or 700.53 kg (dry mass) are removed by bait collectors annually from the 6 popular bait-collecting sites studied. This represents 8.49 % of the mud prawn stocks at these sites and 0.85 % of the entire estuary stock. 85 % of the U africana taken as bait annually, is removed by the 77.12 % of bait collectors who are non-leisure anglers. Recreational or leisure anglers are responsible for removing 14.2 %. The reproduction of female U africana in the Knysna estuary is seasonal and occurs from late July to April. There is evidence that this breeding season consists of two merging breeding cycles. The largest percentage (63 %) of ovigerous females is found in the middle reaches of the Knysna estuary at the Oyster Bank where the highest numbers of stage 1 larvae (165 m⁻³) are released. Larvae were exported from the estuary on the crepuscular ebb tide with peaks in abundance of nearly 1500 m⁻³ in November 1995 and January 1996. Although numbers caught are not significantly higher, larvae are nearly twice as abundant on crepuscular neap tides following a new moon (waxing quarter) than on those following a full moon (waning quarter). Recruitment of juvenile U africana to populations in the estuary was highest in December (45 m⁻²) and decreased over the summer. The highest numbers of recruits (31 m⁻²) were found at those sites closest to the mouth or on the main channel. Recruitment to the Leisure Isle and Thesens sites which are intensively exploited by bait collectors is high (20 - 32 m⁻²). The number of juveniles recruiting to U africana populations is estimated to be four times as high as the numbers of mud prawns taken by bait collectors. Legal methods of bait collection used in the Knysna estuary by the majority of anglers appear to cause minimal sediment disturbance and are not likely to affect the associated infauna. Illegal bait-collecting methods are however highly destructive and must be prohibited. It is concluded that the null hypothesis is acceptable, as mud prawn stocks of the Knysna estuary are not over-exploited and appear to be naturally regulated. The recruitment rate of juvenile U africana is estimated to be sufficiently high to sustain the present levels of exploitation.
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- Date Issued: 1997
Epithermal precious metal deposits physicochemical constraints, classification characteristics and exploration guidelines
- Authors: McIver, Donald A
- Date: 1997
- Subjects: Precious metals , Geothermal resources
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4941 , http://hdl.handle.net/10962/d1005553 , Precious metals , Geothermal resources
- Description: Epithermal deposits include a broad range of precious metal, base metal, mercury, and stibnite deposits. These deposits exhibit a low temperature of formation (180-280°C) at pressures of less than a few hundred bars (equivalent to depths of 1.5 - 2.0lkm). Epithermal gold deposits are the product of large-scale hydrothermal systems which mostly occur in convergent plate margin settings. Associated volcanism is largely of andesitic arc (calcalkaline to alkaline), or rhyolitic back-arc type. Porphyry Cu-Mo-Au deposits form deeper in the same systems. Genetic processes within individual deposits take place in an extremely complex manner. The resultant mineral associations, alteration styles and metal deposition patterns are even more complicated. Many attempts have been made to classify epithermal deposits based on mineralogy and alteration, host rocks, deposit form, genetic models, and standard deposits. For the explorationist, the most useful classification schemes should be brief, simple, descriptive, observationally based, and informative. Ultimately, two distinct styles of epithermal gold deposits are readily recognised: high-sulphidation, acid sulphate and low-sulphidation, adularia-sericite types. The terms high-sulphidation (HS) and low-sulphidation (IS) are based on the sulphidation state of associated sulphide minerals, which, along with characteristic hydrothermal alteration, reflect fundamental chemical differences in the epithermal environment. Highsulphidation-type deposits form in the root zones of volcanic domes from acid waters that contain residual magmatic volatiles. The low-sulphidation-type deposits form in geothermal systems where surficial waters mix with deeper, heated saline waters in a lateral flow regime, where neutral to weakly acidic, alkali chloride waters are dominant. The HSILS classification, combined with a simple description of the form of the deposit, conveys a large amount of information on mineralogy, alteration, and spatial characteristics of the mineralisation, and allows inferences to be drawn regarding likely regional controls, and the characteristics of the ore-forming fluids. The modern understanding of these environments allows us to quite effectively identify the most probable foci of mineral deposition in any given district. Current knowledge of these deposits has been derived from studies of active geothermal systems. Through comparison with alteration zones within these systems, the exploration geologist may determine the potential distribution and types of ore in a fossil geothermal system. Alteration zoning specifically can be used as a guide towards the most prospective part of the system. Epithermal gold deposits of both HS- and LS-styles are nevertheless profoundly difficult exploration targets. Successful exploration must rely on the integration of a variety of exploration techniques, guided by an understanding of the characteristics of the deposits and the processes that form them. There are no simple formulae for success in epithermal exploration: what works best must be determined for each terrain and each prospect. On a regional scale tectonic, igneous and structural settings can be used, together with assessment of the depth of erosion, to select areas for project area scale exploration. Integrated geological-geophysical interpretation derived from airborne geophysics providesa basis of targeting potential ore environments for follow-up. Geology, geochemistry and surface geophysics localise mineral concentrations within these target areas
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- Date Issued: 1997
Effects of sustained elevated CO₂ concentration on two cultivars of barley (Hordeum vulgare L.)
- Authors: Siphugu, Mashudu Victor
- Date: 1997
- Subjects: Barley Barley -- Growth Photosynthesis -- Research Plants -- Effect of carbon dioxide on
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4226 , http://hdl.handle.net/10962/d1003795
- Description: The enormous burning of fossil fuel and deforestation have caused an increase in the atmospheric CO₂ concentration ([CO₂]) during the last century. This will invariably have profound direct and indirect effects on plant carbon metabolism. The majority of research on the effects of CO₂ enrichment on plants are short-term and are done on other crops, but very little have been done on barley. This project aimed to determine the effects of long-term CO₂ enrichment on photosynthesis, growth and grain yield on barley. Hordeum vulgare L. cvs Stirling and Schooner plants were grown from seeds in controlled environment chambers at ambient (350) and elevated (600) μmol molˉ¹ [CO₂]. Measurements of net assimilation rate (NAR), photosynthetic pigments content and growth parameters were started 7 days after germination (DAG) and continued until senescence. The anatomy of matured fully developed leaves was also monitored. Elevated [CO₂l resulted in an increase in NAR in the two cultivars from days 7 until 14, after which the stimulation of NAR of CO₂-enriched plants started to decrease. At the onset of senescence, NAR was almost equal in plants grown under both ambient and elevated [CO₂]. The response of assimilation as a function of internal [CO₂l (C₁) at the end of the experimental period showed a significant decrease in both the initial slope of the A/C₁ curves and the CO₂-saturated photosynthetic rates in the two cultivars. Stirling showed no significant changes in the content of chlorophyll α,chlorophyll б or in total carotenoids. However, Schooner showed a stimulation in chlorophyll α content at day 7, but decreased at day 28. Chlorophyll б and total carotenoids content were not affected by CO₂ enrichment. While total above-ground biomass was not affected by elevated [CO₂] in the two cultivars, total plant height decreased significantly after 14 days in Stirling whereas no significant change occurred in Schooner throughout the experimental period. Leaf area was not significantly affected by CO₂ enrichment in the two cultivars although the leaves in CO₂ enriched plants were slightly shorter. Anatomical studies reveal that leaf thickness was significantly increased by CO₂ enrichment in Stirling, but the increase was not significant in Schooner. Both cultivars did not show any significant effect on chloroplast morphology and ultrastructure as a consequence of elevated CO₂ exposure. No signs of starch accumulation were evident in variety Schooner, but Stirling showed some form of starch accumulation, under increased atmospheric [CO₂]. Elevated CO₂ resulted in a significant reduction by more than 50 % in the number of grain yield per plant in both Stirling and Schooner. Results from this study therefore indicate that CO₂ enrichment will not be beneficial in terms of growth and yield in this important crop.
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- Date Issued: 1997
Eco-ethology of shell-dwelling cichlids in Lake Tanganyika
- Authors: Bills, Ian Roger
- Date: 1997
- Subjects: Cichlids -- Africa, East , Cichlids -- Tanganyika, Lake , Fishes -- Behavior
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5265 , http://hdl.handle.net/10962/d1005109 , Cichlids -- Africa, East , Cichlids -- Tanganyika, Lake , Fishes -- Behavior
- Description: Observations of habitats are reported. A series of underwater experiments were conducted in natural habitats to answer questions concerning a) why Lamprologus ocellatus and Lamprologus ornatipinnis bury gastropod shells refuges into the substrate, and b) to examine interspecies differences in shell-using behaviours. Some behaviour patterns were analysed using phylogenetic methods. Lamprologus ocellatus and L. ornatipinnis responded to new shells in a variety of ways, shells were moved, buried (and used) or hidden (buried and not used). How shells are utilised seems to be dependant on a complex of factors such as the size and quality of new the shell and the number already in the territory. Shell use may also be affected by neighbour species, sex, size and predation levels. There are interspecific differences in the size of shells used and the methods of shell use. The latter results in species-characteristic shell orientations, vertical burial in L. ocellatus and horizontal burial in L. ornatipinnis. Shell orientation does affect other species/use of shells. Shell movement and vertical orientation appear to be apomorphic while shell hiding and burial are pleisiomorphic within the genus Lamprologus. Numerous cues are involved in stimulating shell burial. Most of these cues are actively sought by the fish by external and internal inspections. Shell burial therefore appears to be a method of reducing the information gathering ability of potential shell-dwelling competitors. Shell burial can therefore be regarded as an investment process which enhances the residents ability to defend its territory. Males can also control the distribution of open shells within teritories and thus control mate access to shells. This behaviour could be a significant factor in the evolution of marked sexual dichromatism exhibited within the genus.
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- Date Issued: 1997
Cytogenetic studies of Pseudobarbus and selected Barbus (Pisces: Cyprinidae) of southern Africa
- Authors: Naran, Daksha
- Date: 1997
- Subjects: Cyprinidae
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5252 , http://hdl.handle.net/10962/d1005095 , Cyprinidae
- Description: The aim of this study was to explore the karyology of temperate southern African barbine species in order to determine the extent and significance of polyploidy within the species. The study presents an optimised in vivo karyological protocol for the small barbines. The analysis of chromosomal data was explored using two approaches; measured (quantitative) and visual (qualitative). The karyology of 16 species of Barbus and six species of Pseudobarbus (Pisces: Cyprinidae) is reported. The study represents an almost complete (22/23 species) karyological survey of the temperate barbines. Chromosome number, arm numbers (NF) are recorded and karyotype morphology described for all species. Nucleolar organiser regions (NOR)s of 18 species have been examined by silver staining. Seven different AgNOR phenotypes occur among the species examined. Chromosome complements of the different species indicate at least three ploidy levels; diploid, tetraploid and hexaploid. Higher ploidy levels are represented in 78% (18/23) of species within the temperate fauna. This finding is remarkable, in the light of global proportions of cyprinid karyotypes, and provides an opportunity to shed further light on the evolution of polyploidy in barbine cyprinids. Results show that morphologically defined species complexes have distinct karyotypes, and most probably form cohesive phyletic clades. A phylogenetic tree was constructed using traditional morphological characters and tested against karyological data. The results suggests that similar ploidy states do not necessarily indicate close relationship between species. This supports a hypothesis of polyphyly for the African barbine cyprinids and also provides independent support for species complexes such as the "chubbyhead barb group" and the Pseudobarbus lineage. The broader implications of karyological findings are discussed within the context of African barbines and recommendations for further cytogenetic research are provided.
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- Date Issued: 1997
Chemical studies of necic acid analogues
- Authors: Guthrie-Strachan, Jeffry James
- Date: 1997
- Subjects: Organic acids , Chemistry, Organic
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4425 , http://hdl.handle.net/10962/d1006909 , Organic acids , Chemistry, Organic
- Description: Various aldehydes have been reacted with methyl acrylate under Baylis-Hillman conditions, using DABCO as a catalyst, to afford a range of α-substituted acrylic esters containing an allylic hydroxy group. Selected Baylis-Hillman products have been brominated, hydrolysed and acetylated to afford substrates for the synthesis of necic acid analogues. The diastereo- and regioselectivity of nucleophilic attack, using sodium methylmercaptan, on the Baylis-Hillman products and selected brominated derivatives was investigated. The allylic hydroxy compounds favour conjugate addition with the generation of a new chiral centre, while the allylic bromo derivatives favour substitution (SN and SN') (S[subscript N] and S[subscript N]') with consequent loss of chirality. (E)-2-Isopropylcrotonic acid, a vital precursor in the synthesis of all stereoisomers of trachelanthic and viridifloric acid, was synthesised in an attempt to obtain the necic acid components required for total alkaloid synthesis of lycopsamine and its derivatives. This precursor and salicylic acid were then used to prepare esters of retronecine, a dihydroxy necine base obtained via extraction and consequent hydrolysis of retrorsine.
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- Date Issued: 1997