A taxonomic study of Senecio speciosus, Senecio macrocephalus and possible hybrid populations using morphological data, toxicty tests and chromatography
- Authors: Lewis, Gillian Elizabeth
- Date: 1995
- Subjects: Senecio , Senecio -- Analysis , Shrimps , Artemia
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:4209 , http://hdl.handle.net/10962/d1003778
- Description: The variation between populations of Senecio speciosus Willd., Senecio macrocephalus DC. and intermediate plants was investigated in a comparative study of morphological characters, toxicity of plant extracts to brine shrimps (Artemia salina) and chromatography of plant extracts. Specimens were collected at 18 localities in the Eastern Cape Province. All these specimens were examined morphologically and chemical extracts were tested for toxicity and by comparative chromatography. The collection of Senecio speciosus and Senecio macrocephalus specimens in the Selmar Schonland Herbarium (GRA) was also examined morphologically. Six geographical areas were represented in the combined collections. Analysis of morphological data separated typical Senecio speciosus and Senecio macrocephalus at either end of hybrid index histograms and principal components analysis diagrams. The intermediate populations displayed morphological characters of both Senecio speciosus and Senecio macrocephalus. Some specimens were intermediate between these two species, falling within the range of variation of these species while others fell outside this range. The Brine Shrimp Assay was used to test for toxicity and to investigate the possibility of using toxicity data as a genetic marker in taxonomic studies. As Senecio speciosus extracts were less than 1% toxic and Senecio macrocephalus extracts were at least 95% toxic to the brine shrimps it is suggested that in this case toxicity can be used as a genetic marker. Toxicity can even be described as a good taxonomic character as discontinuity is very sudden and complete. The intermediate plants in the Grahamstown area were at least 92% toxic to the brine shrimps linking them to Senecio macrocephalus. Thin layer and paper chromatography were used as comparative techniques to study the chemical profiles of the specimens. Alkaloids, terpenoids and flavonoids were studied. Thin layer chromatography to separate the alkaloid components of the plant extracts showed Senecio speciosus and Senecio macrocephalus to have distinct chemical profiles suggesting that they are separate species. The intermediate plants- were found to contain chemical compounds matching either or both Senecio speciosus and Senecio macrocephalus suggesting that they may have arisen by hybridisation. In a preliminary investigation Senecio speciosus extracts showed a complete lack of terpenoid compounds whereas extracts from Senecio macrocephalus and the intermediate specimens tested gave a terpenoid colour reaction in the basal spot only. This links the intermediate populations with Senecio macrocephalus. Paper chromatography to separate the flavonoid constituents of the plant extracts also showed typical Senecio speciosus and Senecio macrocephalus to be distinct. The intermediate populations contained flavonoid compounds from one or both of these species. The populations in the Grahamstown area show morphological features close to and in some cases indistinguishable from Senecio speciosus. Chemically these specimens show some similarities with Senecio macrocephalus. In the East London area specimens show a similar mixture of characters but appear morphologically to be closer to Senecio macrocephalus. However, in the Amatole Mountains, despite both species being present in the same locality it appears that no hybridisation has occurred. It is therefore suggested that at some of the localities where the geographical ranges of Senecio speciosus and Senecio macrocephalus overlap in the Eastern Cape Province hybridisation between these two species occurs.
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- Date Issued: 1995
Assessment of the Department of Rural Development and Agrarian Reform's maize cropping programme in the Eastern Cape
- Authors: Mqamelo, Luvolwethu
- Date: 2017
- Subjects: Cropping systems Crops and climate Crop yields
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10353/9165 , vital:34288
- Description: The Department of Rural Development and Agrarian Reform maize cropping programme is one of the flagship projects that has been entrusted by the provincial government to tackle the social ills faced by the rural communities of the Eastern Cape Province. The programme is in line with a number of policies that strive to unlock the agricultural potential in inducing the much talked about radical economic transformation. This study was aimed at establishing if the outlay of the implementation processes and the outcomes of the maize cropping programme in Eastern Cape are sufficient to achieve the stated objectives. The study adopted a triangulation method to get comprehensive understanding of the programme and for accuracy and verification of the data collected. A pre-tested semistructured questionnaire was used to collect the demographics and socio-economic status of the respondents; technical skills and capabilities; implementation processes of the programme and the perceptions of the participants and key strategic role players in the maize cropping programme. A total of 120 respondents from DRDAR’s 2016/2017 financial year supported list and 9 key informants were sampled for the study. Furthermore, a gross margin analysis was used to establish the viability and the sustainability of the programme with and without DRDAR’s subsidies. For purposes of determining if there was any relation between the maize enterprise income and 13 independent variables, a multiple regression model was employed. The results of the study show that the programme is dominated by old and uneducated individuals with an average age of 60 years. The implementation processes are proving to be fairly progressed however, at a very limited scale. This includes provision of production inputs and mechanization services on time, formation of self-serving legal entities and unlocking the private sector investment. The gross margins generated from the programme have been observed to be non-viable and unsustainable. As a result, only 31% of the respondents were able to attain a gross margin equal or greater than the allocable costs of producing maize both under irrigation and dry land. The results of the regression model indicated that, only 5 of the 13 independent variables (household gender, marital status, years of participation, area planted and yield) were found to have a significant effect to the maize enterprise income. Overall, the DRDAR’s maize cropping programme has failed to meet its intended objectives. In addition, more than 70 percent of the programme participants produced for subsistence purposes and showed no desire to fully commercialise their operations.
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- Date Issued: 2017
Falcipains as malarial drug targets
- Authors: Kanzi, Aquillah Mumo
- Date: 2013
- Subjects: Malaria Malaria -- Chemotherapy Plasmodium falciparum Antimalarials -- Development Cysteine proteinases Cysteine proteinases -- Inhibitors Papain Drug development Bioinformatics
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:3897 , http://hdl.handle.net/10962/d1003842
- Description: Malaria is an infectious disease caused by parasites of the Plasmodium genus with mortality rates of more than a million annually, hence a major global public health concern. Plasmodium falciparum (P. falciparum) accounts for over 90% of malaria incidence. Increased resistance to antimalarial drugs by the Plasmodium parasite, coupled with the lack of an effective malaria vaccine necessitates the urgent need for new research avenues to develop novel and more potent antimalarial drugs. This study focused on falcipains, a group of P. falciparum cysteine proteases that belong to the clan CA and papain family C1, that have emerged as potential drug targets due to their involvement in a range of crucial functions in the P. falciparum life cycle. Recently, falcipain-2 has been validated as a drug target but little is known of its Plasmodium orthologs. Currently, there are several falcipain inhibitors that have been identified, most of which are peptide based but none has proceeded to drug development due to associated poor pharmacological profiles and susceptibility to degradation by host cysteine proteases. Non-peptides inhibitors have been shown to be more stable in vivo but limited information exists. In vivo studies on falcipain-2 and falcipain-3 inhibitors have also been complicated by varying outcomes, thus a good understanding of the structural variations of falcipain Plasmodium orthologs at the active site could go a long way to ease in vivo results interpretation and effective inhibitor design. In this study, we use bioinformatics approaches to perform comparative sequence and structural analysis and molecular docking to characterize protein-inhibitor interactions of falcipain homologs at the active site. Known FP-2 and FP-3 small molecule nonpeptide inhibitors were used to identify residue variations and their effect on inhibitor binding. This was done with the aim of screening a collection of selected non-peptide compounds of South African natural origin to identify possible new inhibitor leads. Natural compounds with high binding affinities across all Plasmodium orthologs were identified. These compounds were then used to search the ZINC database for similar compounds which could have better binding affinities across all selected falcipain homologs. Compounds with high binding affinities across all Plasmodium orthologs were found.
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- Date Issued: 2013
The effects of a lion (Panthera Leo) re-introduction on a resident cheetah (Acinonyx Jubatus) population In Mountain Zebra National Park, Eastern Cape, South Africa
- Authors: Van de Vyver, Daniel
- Date: 2017
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/7420 , vital:21259
- Description: The global decline of large (> 10 kg) carnivores has resulted in a variety of conservation measures being put into practice to prevent extinctions. The establishment of predator-proof fences around protected areas has been a successful tool for reducing human-predator conflict. Furthermore, the re-introduction of large carnivores into small (< 1 000 km²), enclosed reserves has aided in the conservation of many species. Cheetahs (Acinonyx jubatus) and lions (Panthera leo) have benefitted from such re-introductions. The re-introduction of cheetahs before lions into the Mountain Zebra National Park (MZNP) in the Eastern Cape Province of South Africa provided a unique opportunity to study the effects of lions on an already established cheetah population. Spatial data were downloaded remotely from GPS collared individuals (n=4) and cheetah kill data were collected using the GPS cluster method before (2012-2013) and after (2013-2014) the lion (n=3) re-introduction. The same methods were used for lion kill data collection once they had been re-introduced. In general, cheetah home range size did not change after the lion re-introduction. Cheetahs selected areas with a combination of open and closed vegetation covers, while lions selected either open or closed areas of vegetation covers. In addition, as vegetation cover became thicker, the presence of cheetahs decreased. The cheetahs preyed upon seven species before and 11 species after the lion re-introduction. Medium sized prey comprised the bulk of the cheetah diet with kudu (Tragelaphus strepsiceros) and springbok (Antidorcas marsupialis) being the preferred species both before and after the lion re-introduction. The lion diets consisted of medium to large sized prey, with the male lions selecting eland (Tragelaphus oryx) and buffalo (Syncerus caffer) and the lioness selecting red hartebeest (Alcelaphus buselaphus). The cheetahs had no significant dietary overlap with the lions and there was only one record of kleptoparasitism. The results of my study indicate that cheetahs are able to co-exist with lions when lions are at low densities in an enclosed reserve. The cheetahs did not experience landscape-level displacement because they made fine-scale adjustments to avoid lions within their environment. This adaptability may have important management implications for future re-introductions of cheetahs into enclosed game reserves.
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- Date Issued: 2017
The recording, retrieval and analysis of some electrophysiological measures relevant to psychology
- Authors: Barnes, Robert M
- Date: 1981
- Subjects: Psychology -- Computer programs Electroencephalography -- Research Electrophysiology -- Research
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:2914 , http://hdl.handle.net/10962/d1002079
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- Date Issued: 1981