Validating the use of Hippobromus pauciflorus (L.f) Radlk for the treatment of eye infections in the Eastern Cape South Africa
- Authors: Pendota, Srinivasa Chary
- Date: 2010
- Subjects: Medicinal plants -- South Africa -- Eastern Cape , Herbs -- Therapeutic use , Eye -- Infections -- South Africa -- Eastern Cape , Sapindaceae
- Language: English
- Type: Thesis , Doctoral , PhD (Botany)
- Identifier: vital:11303 , http://hdl.handle.net/10353/d1001052 , Medicinal plants -- South Africa -- Eastern Cape , Herbs -- Therapeutic use , Eye -- Infections -- South Africa -- Eastern Cape , Sapindaceae
- Description: An ethnobotanical survey of plants used for the treatment of eye infections was carried out in the Eastern Cape Province of South Africa. The study revealed that 12 plant species are commonly used with Hippobromus pauciflorus (L.f) Radlk being the most frequent. The crude extracts of the leaves, stem bark and roots of the plant were investigated for antimicrobial activity against 10 bacterial and four fungal strains. The methanol extracts of the plant parts were the most active and showed appreciable activity against Gram-positive and Gram-negative bacteria. The methanol extracts of the leaves and stem bark inhibited the growth of fungi with activities ranging from 78.70 percent to 100 percent on Aspergillus niger and Penicillium notatum. The acetone extracts of the leaves and stem bark were active against A. niger (51.76 percent) and P. notatum (77.22 percent). The aqueous extract of Hippobromus pauciflorus leaves at 50, 100 and 200 mg/kg body weight doses were evaluated for anti-inflammatory, analgesic and antipyretic activities in male Wistar rats. Anti-inflammatory activity was studied by using carrageenan-and histamine induced oedema right hind paw volume while the analgesic effect was evaluated using formalin-induced pain and tail flick nociception response. The brewer’s yeast-induced pyrexia model was used for the antipyretic investigation. The extract at all the doses used significantly inhibited both the carrageenan- and histamine-induced inflammation in a manner that was not dose dependent. The extract reduced the formalin-induced pain licking as well as prolonged the reaction time in the tail flick-induced pain. The effects of the aqueous extract of the plant leaves at 50, 100 and 200 mg/kg body weight doses were investigated for 14 days on some biochemical parameters of male Wistar rats. The extract at all the doses tested did not significantly alter the levels of white blood cells, red blood cells, mean corpuscular volume, platelets, neutrophils, monocytes, lymphocytes and large unstained cells. While the levels of haemoglobin, packed cell volume and basophils increased at specific doses, those of mean corpuscular haemoglobin, mean corpuscular haemoglobin concentration and eosinophils decreased. In vitro antiviral activities of the plant against herpes simplex virus type 1(HSV-1) and coxsakie virus B6 were investigated. Cytotoxicity was evaluated by MTT assay in Vero cells. At concentrations ranging from 165-270/μg/ml there was significant antiviral activity against HSV-1, but toxicity was also noted. There was no antiviral activity against coxsakie virus B6. Bioactivity-guided fractionation of the leaves of H. pauciflorus yielded three known compounds. From the ethyl acetate fraction, two compounds were isolated (epicatechin and -sitosterol ) and from the n- hexane fractions, one compound (lupeol) was isolated. They were isolated and identified using various techniques. The antimicrobial, anti-inflammatory, analgesic and anti-pyretic activity of these compounds have been reported in literature. The structure and distribution of foliar appendages on the leaves of H. pauciflorus were examined by scanning electron microscope. The leaves have long unicellular nonglandular trichomes which were distributed over the mid rib and densely populated at the edges of the adaxial and abaxial surfaces. In general, the experiments and tests conducted in this study appear to have justified the use of Hippobromus pauciflorus for the treatment of eye infections and make a substantial contribution to the knowledge base of the use of herbal medicine for the treatment of the eye infections.
- Full Text:
- Date Issued: 2010
Time budgets, avoidance distance scores-related behaviour and milk yield of pasture-based Jersey, Friesland and cross bred cows
- Authors: Dodzi, Madodana Sunson
- Date: 2010
- Subjects: Dairy products -- Analysis , Jersey cattle , Milk yield , Dairy cattle -- Feed utilization efficiency , Dairy farming
- Language: English
- Type: Thesis , Masters , MSc Agric (Animal Science)
- Identifier: vital:11817 , http://hdl.handle.net/10353/474 , Dairy products -- Analysis , Jersey cattle , Milk yield , Dairy cattle -- Feed utilization efficiency , Dairy farming
- Description: Time budgets, avoidance distance scores-related behaviour and milk yield of pasture-based Jersey, Friesland and crossbred cows. by Madodana Sunson Dodzi The study was conducted at the University of Fort Hare farm to determine the time budgets, the avoidance-related behaviour variables and their relationship with milk yield in three pasturebased dairy genotypes: Jersey, Friesland and crossbreed. Twenty one clinically health dairy cows aged between 52 and 55 months, in mid lactation and comprising of seven cows from each genotype were used in the study. The time spent on different activities (grazing, lying down, standing and others) at pasture was recorded using stop watches across four seasons. The behavioural responses of the three genotypes to humans were determined by recording their avoidance distance scores (AD), exit speed (ES), pen scores (PS), pen behaviour scores (PBS), plat form scores (PLS) and the occurrence of kicking (KCK) and stepping (SPG) during milking on four consecutive days in four seasons. Time spent standing was higher (P < 0.05) for Friesland compared to Jersey and crossbred during the hot-wet season. In the cool-dry season the Jersey spent more time (P < 0.05) grazing than the other breeds. The Friesland and crossbred on the other hand devoted most of their time lying down compared to Jersey in the cool- dry season (P < 0.05). There were season differences in time spent on all activities (P < 0.05). Time spent on grazing was longest in post-rainy seasonal and lowest in hot- wet season (P < 0.05). The longest lying down period was observed in the hot-dry season and lowest in hot-wet season (P < 0.05). iii Daily milk yield Varied (P < 0.05) with genotype with the Friesland and Jersey producing higher yield than the crossbred. The highest amount was produced in hot-dry and the least in hot-wet season. Milk yield was positively correlated (P < 0.05) with lying down. Standing was negatively correlated with milk yield (P < 0.05). The Friesland had the highest avoidance distance scores (P < 0.05) and the Jersey had the lowest avoidance distance scores in all seasons. There was an association (P < 0.05) between genotype and exit speed scores, pen scores and stepping behaviour scores. The Friesland exhibited the highest exit speed scores than the other breeds. The Jersey had the lowest (P < 0.05) kicking behaviour scores. There was a relationship (r = 0.64) between avoidance distance scores and exit speed. Exit speed scores were correlated with pen score(r= 0.23). Milk yield was significant related (r= 0.17) to the occurrence of kicking behaviour. The genotypes showed different levels of sensitivity to season and milk yield was influenced by breed and season. It can be concluded that time budgets vary with season and farmers need to adopt measures that buffer the effect of season on welfare of dairy cows. It can also be concluded that avoidance distance scores differs according to genotype with Jersey being more confident to humans than other two breeds. It is therefore recommended that provision of shades or cooling mechanism should be adopted to buffer the effects of hot-wet season. Improving quality of feed during the cool-dry season may be critical for Jersey cows. Finally positive handling of the dairy cows is recommended in order to improve the welfare and milk yield of pasture based dairy cows.
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- Date Issued: 2010
Tillage and crop rotation impacts on soil, quality parameters and maize yield in Zanyokwe Irrigation Scheme, South Africa
- Authors: Njaimwe, Arnold Ngare
- Date: 2010
- Subjects: No-tillage , Soil mechanics , Soils -- Quality , Cover crops , Corn -- Irrigation
- Language: English
- Type: Thesis , Doctoral , PhD (Soil Science)
- Identifier: vital:11962 , http://hdl.handle.net/10353/460 , No-tillage , Soil mechanics , Soils -- Quality , Cover crops , Corn -- Irrigation
- Description: Intensive tillage and monoculture cropping practices reduce soil C accumulation hence increasing soil vulnerability to chemical, physical and biological degradation. This study focussed on enhancing biomass production of wheat and oat winter cover crops as a means of increasing C sequestration in the low organic C soils of the central part of Eastern Cape Province. The specific objectives were (i) to evaluate the short-term effects of no till and cereal-fallow based crop rotations on; soil organic matter related parameters, pH and electrical conductivity, (ii) soil bulk density, water retention and aggregate stability, (iii) soil microbial biomass C and N, mineralizable N, soil respiration, and dehydrogenase enzyme activity, (iv) grain yield, soil nutrient concentration (N, P and K) and their uptake by maize, and (v) to identify soil parameters with high sensitivity to tillage under maize-fallow-maize, maize-wheat-maize and maize-oat-maize rotational cover cropping practices. The experiment was laid out as a split-plot arrangement in a randomized complete block design with 4 replicates. Tillage treatments (CT and NT) were applied on the main plots which measured 8 × 18 m while crop rotation treatments were applied in the subplots which measured 8 × 6 m. The rotation treatments were maize-fallow-maize (MFM), maize-wheat-maize (MWM) and maize-oat-maize (MOM). Weed control in NT plots involved preplant application of glyphosate to control mainly the grass weeds while post emergence weed management was done using Atrazine (485 atrazine and 15 g l-1 triazines). Initial weed control in CT plots was achieved through ploughing to a depth of 20 cm followed by disking while post emergence weed iii management was done by hand hoeing. Soil parameters measured were; (i) particulate organic matter (POM), soil organic carbon (SOC), total nitrogen (TN), pH and electrical conductivity (EC), (ii) soil bulk density (b), moisture at field capacity (FC), aggregate mean weight diameter (MWD) determined by fast wetting (FW), slow wetting (SW), mechanical breakdown by shaking (MB) and the stability index (SI), (iii) soil microbial biomass C (MBC) and N (MBN), mineralizable N (MN), soil respiration (SR), and dehydrogenase enzyme activity (DHEA). No-till increased POM and TN compared to CT in Lenye and Burnshill, respectively. The MWM and the MOM rotations increased TN relative to the MFM rotation in Lenye. The MWM and MOM rotations enhanced SOC relative to MFM in all sampled soil depths at Burnshill and similar observations were made under MOM rotation in the 5-20 cm depth in Lenye. The MWM and MOM rotations tended to depress soil pH relative to the MFM rotation in both sampled soil depths in Lenye while NT reduced soil pH relative to CT on the surface soil layer in Burnshill. Soil EC and pH varied with depth across tillage practices but both parameters remained within the ideal range for successful crop production over the study period. Soil stability index (SI) and aggregate MWD determined by FW, SW and MB were higher in Lenye compared to Burnshill. The MOM rotation enhanced the SI relative to MFM and MWM rotations at both sites. Scanning electron microscope (SEM) showed that more organic C was incorporated into the soil under NT and MOM rotation compared to CT and MFM rotation which had few organic coatings on the soil particles. Microbial properties varied with plant biomass input as influenced by tillage and type of rotational cover crop at both sites. Like in other past studies, NT showed higher levels of MBC, MBN, NM and SR at the soil surface layer compared to CT in Burnshill. No till increased MN iv relative to CT in both sampled soil depths in Lenye and resulted in higher DHEA compared to CT in Burnshill. The MOM rotation increased MBC, MBN, MN relative to MFM rotation especially within surface soil layer. Similar observations were made with respect to MN and SR in both sampled soil layers at Lenye. By contrast, the DHEA was higher under the MFM relative to the MWM and MOM rotations in Lenye but similar under the MFM and MOM rotations in Burnshill. Maize grain yield was not affected by both tillage and crop rotations but varied with cropping season. Comparable grain yields observed under the two tillage practices with similar fertilizer application rates indicated the advantage of NT over CT in saving on labour costs in maize production without compromising yields. High plant biomass retention under NT relative to CT contributed to high soil N and P levels under the former compared to the latter tillage practice especially on soil surface layer at both study sites. Principal component analysis (PCA) revealed that soil chemical and biological parameters closely linked to organic matter, namely SOC, MN, MBC and MBN showed the highest sensitivity to tillage and crop rotation treatments. Soil aggregate MWD determined by SW and b were the physical parameters which were highly altered by agronomic management practice. The MWM and MOM rotations were clustered together and clearly separated from the MFM rotation and this observed trend only applied to the 0-5 and 5-20 cm depths in Lenye site only. No till, MWM and MOM rotations enhanced POM, SOC and TN relative to CT and MFM rotation suggesting these practices have greater potential to improve soil chemical properties compared to intensive tillage and maize monoculture based production practices. Reduced soil b under MOM rotation and improved SI under NT compared to MFM and CT, respectively v indicate that these practices have the potential to improve degraded soils. Although not significantly different, NT values for MBC, MBN, MN, SR and DHEA were higher compared to CT indicating the potential of the practice to improve soil biotic activity relative to conventional tillage practices. No till enhanced surface soil nitrate N and extractable P compared to CT at both sites revealing the long-term potential of NT in improving the supply of these essential plant nutrients compared to CT. Principal component analysis showed that SOC, MN, K, P, MBC, MBN, soil aggregate MWD determined by SW and b were the most sensitive parameters to tillage and crop rotations. Therefore, these parameters could constitute the minimum data set for assessments of the impact of selected CA practices on soil quality attributes.
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- Date Issued: 2010
Synergistic potententials and isolation of bioactive compounds from the extracts of two helichrysum species indigenous to the Eastern Cape province
- Authors: Aiyegoro, Olayinka Ayobami
- Date: 2010
- Subjects: Helichrysum -- South Africa -- Eastern Cape , Antibiotics , Antioxidants , Medicinal plants -- South Africa -- Eastern Cape , Traditional medicine -- South Africa -- Eastern Cape
- Language: English
- Type: Thesis , Doctoral , PhD (Microbiology)
- Identifier: vital:11268 , http://hdl.handle.net/10353/250 , Helichrysum -- South Africa -- Eastern Cape , Antibiotics , Antioxidants , Medicinal plants -- South Africa -- Eastern Cape , Traditional medicine -- South Africa -- Eastern Cape
- Description: Helichrysum longifolium and H. pedunculatum belong to the Astereceae family and are used extensively in folkloric medicine in South Africa to manage stress-related ailments and as dressings for wounds normally encountered in circumcision rites, bruises, cuts and sores. The in vitro antibacterial time-kill studies, the synergistic potentials, the phytochemical screenings and antioxidant potentials as well as the isolation of the bioactive compounds from the extracts of these two plants were carried out in this study. The in vitro antibacterial activities and time kill regimes of crude extracts of H. pedunculatum was assessed. The extracts was active against both Gram positive and Gram negative bacteria tested at a concentration of 10 mg/ml. Minimum Inhibitory Concentration (MIC) values for all the susceptible bacteria ranged between 0.1 – 35 mg/ml. The average log reduction in viable cell count in time kill assay ranged between 0.17 Log10 to 6.37 Log10 cfu/ml after 6 h of interaction, and between 0.14 Log10 and 6.99 Log10 cfu/ml after 12 h interaction in 1 × MIC and 2 × MIC of the extract. The effect of the aqueous extract was only bacteriostatic on both reference and environmental strains and the clinical isolates were outrightly resistant to aqueous extract. This is worrisome and this could be one reason why, there is an incidence of high death rate resulting from circumcision wounds infection even after treating such wounds with H. pedunculatum leaf. In vitro antibacterial time kill studies of extracts of H. longifolium was assessed. All test bacteria were susceptible to the methanol extract, while none was susceptible to the aqueous extract. Two of the test bacteria were susceptible to the ethyl acetate extract, while ten and seven were susceptible to the acetone and chloroform extracts respectively at the test concentration of 5 mg/ml. The minimum inhibitory concentrations (MICs) ranged between 0.1 and 5.0 mg/ml, while minimum bactericidal concentrations (MBCs) ranged between 1.0 and >5 mg/ml for all the extracts. Average log reductions in viable cell counts for all the extracts ranged between 0.1 Log10 and 7.5 Log10 cfu/ml after 12 h interaction at 1 × MIC and 2 × MIC. Most of the extracts were rapidly bactericidal at 2 × MIC achieving a complete elimination of most of the test organisms within 12 h exposure time. The effect of combinations of the crude extracts of H. pedunculatum leaves and eight antibiotics was investigated by means of checkerboard and time-kill methods. In the checkerboard method, synergies of between 45.83-56.81 percent were observed and this is independent of Gram reaction, with combinations in the aqueous extract yielding largely antagonistic interactions (18.75 percent). The time kill assay also detected synergy that is independent of Gram reaction with a ≥ 3Log10 potentiation of the bactericidal activity of the test antibiotics. We conclude that the crude leaf extracts of H. pedunculatum could be potential source of broad spectrum antibiotics resistance modulating compounds. The interactions between crude extracts of H. longifolium in combination with six first-line antibiotics using both the time-kill and the checkerboard methods were carried out. The time-kill method revealed the highest bactericidal activity exemplified by a 6.7 Log10 reduction in cell density against Salmonella sp. when the extract and Penicillin G are combined at ½ × MIC. Synergistic response constituted about 65 percent, while indifference and antagonism constituted about 28.33 percent and 6.67 percent in the time kill assay, respectively. The checkerboard method also revealed that the extracts improved bactericidal effects of the antibiotics. About 61.67 percent of all the interactions were synergistic, while indifference interactions constituted about 26.67 percent and antagonistic interactions was observed in approximately 11.66 percent. The in vitro antioxidant property and phytochemical constituents of the aqueous crude leaf extracts of H. longifolium and H. pedunculatum was investigated. The scavenging activity on superoxide anions, DPPH, H2O2, NO and ABTS; and the reducing power were determined, as well as the flavonoid, proanthocyanidin and phenolic contents of the extracts. The extracts exhibited scavenging activity in all radicals tested due to the presence of relatively high total phenol and flavonoids contents in the extracts. Our findings suggest that H. longifolium and H. pedunculatum are endowed with antioxidant phytochemicals and could serve as a base for future drugs. Bioactivity-guided fractionation of the leaves of H. longifolium and H. pedunculatum yielded two known compounds. From the n-hexane fraction of H. longifolium a compound was isolated (Stigmasterol) and from the ethyl acetate fraction of H. pedunculatum another compound (β-sitosterol) was isolated. The compounds were isolated and identified using various techniques. The antimicrobial, anti-inflammatory, antioxidant, analgesic and anti-pyretic activities of these compounds have been reported in literatures. In general, the experiments and tests conducted in this study appear to have justified the folkloric medicinal uses of H. longifolium and H. pedunculatum for the treatment of stress related ailments and wound infections and make a substantial contribution to the knowledge base of the use of herbal medicine for the treatment of the microbial infections.
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- Date Issued: 2010
Surveillance of invasive vibro species in discharged aqueous efflents of wastewater treatment plants in the Eastern Cape province of South Africa
- Authors: Igbinosa, Etinosa Ogbomoede
- Date: 2010
- Subjects: Vibrio -- South Africa -- Eastern Cape , Water -- Fluoridation -- South Africa -- Eastern Cape , Water -- Pollution -- South Africa -- Eastern Cape , Effluent quality -- South Africa -- Eastern Cape , Water -- Purification -- South Africa -- Eastern Cape
- Language: English
- Type: Thesis , Doctoral , PhD (Microbiology)
- Identifier: vital:11267 , http://hdl.handle.net/10353/245 , Vibrio -- South Africa -- Eastern Cape , Water -- Fluoridation -- South Africa -- Eastern Cape , Water -- Pollution -- South Africa -- Eastern Cape , Effluent quality -- South Africa -- Eastern Cape , Water -- Purification -- South Africa -- Eastern Cape
- Description: Vibrio infections remain a serious threat to public health. In the last decade, Vibrio disease outbreaks have created a painful awareness of the personal, economic, societal, and public health costs associated with the impact of contaminated water in the aquatic milieu. This study was therefore designed to assess the prevalence of Vibrio pathogens in the final effluents of wastewater treatment plants (WWTPs) in the Eastern Cape Province, as well as their abilities to survive the treatment processes of the activated sludge system either as free cells or as plankton-associated entities in relation to the physicochemical qualities of the effluents. Three wastewater treatment facilities were selected to represent typical urban, sub-urban and rural communities, and samples were collected monthly from August 2007 to July 2008 from the final effluent, discharge point, 500 meter upstream and downstream of the discharge points and analysed for physicochemical parameters, Vibrio pathogens prevalence and their antibiogram characteristics using both culture based and molecular techniques. Physicochemical parameters measured include pH, temperature, electrical conductivity, salinity, turbidity, total dissolved solid (TDS), dissolved oxygen (DO), chemical oxygen demand (COD), nitrate, nitrite and orthophosphate levels. Unacceptably high levels of the assayed parameters were observed in many cases for COD (<10 - 1180 mg/l), nitrate (0.08 - 13.14 mg NO3- as N/l), nitrite (0.06 - 6.78 mg NO2- as N/l), orthophosphate (0.07-4.81 mg PO43- as P/l), DO (1.24 - 11.22 mg/l) and turbidity (2.04 -159.06 NTU). Temperature, COD and nitrite varied significantly with season (P < 0.05), while pH, EC, salinity, TDS, COD, and nitrate all varied significantly with sampling site (P < 0.01; P < 0.05). In the rural wastewater treatment facility, free-living Vibrio densities varied from 0 to 3.45 × 101 cfu ml-1, while the plankton-associated Vibrio densities vary with plankton sizes as follows: 180 μm (0 – 4.50 × 103 cfu ml-1); 60 μm (0 – 4.86 × 103 cfu ml-1); 20 μm (0 – 1.9 × 105 cfu ml-1). The seasonal variations in the Vibrio densities in the 180 and 60 μm plankton size samples were significant (P < 0.05), while the 20 μm plankton size and free-living vibrios densities were not. Molecular confirmation of the presumptive vibrios isolates revealed V. fluvialis (36.5 percent), as the predominant species, followed by V. vulnificus (34.6 percent), and V. parahaemolyticus (23.1 percent), and V. metschnikovii (5.8 percent) (detected using only API 20 NE), suggesting high incidence of pathogenic Vibrio species in the final effluent of the wastewater facility. Correlation analysis suggested that the concentration of Vibrio species correlated negatively with salinity and temperature (P < 0.001 and P < 0.002 respectively) as well as with pH and turbidity (P < 0.001), in the final effluent. Population density of total Vibrio ranged from 2.1 × 101 to 4.36 × 104 cfu ml-1 and from 2.80 ×101 to 1.80 × 105 cfu ml-1 for the sub-urban and urban communities treatment facilities respectively. Vibrio species associated with 180 μm, 60 μm, and 20 μm plankton sizes, were observed at densities of 0 - 1.36 × 103 cfu ml-1, 0 - 8.40 × 102 cfu ml-1 and 0 - 6.80 × 102 cfu ml-1 respectively at the sub-urban community‘s WWTP. In the urban community, counts of culturable vibrios ranged from 0 - 2.80 × 102 cfu ml-1 (180 μm); 0 - 6.60 × 102 cfu ml-1 (60 μm) and 0 -1.80 × 103 cfu ml-1 (20 μm). Abundance of free-living Vibrio species varied between 0 and the orders of 102 and 103 cfu ml-1 in the sub-urban and urban communities WWTPs respectively. Molecular confirmation of the presumptive vibrios isolates revealed the presence of V. fluvialis (41.38 percent), V. vulnificus (34.48 percent), and V. parahaemolyticus (24.14 percent) in the sub-urban community effluents. In the urban community V. fluvialis (40 percent), V. vulnificus (36 percent), and V. parahaemolyticus (24 percent) were detected. There was no significant correlation between Vibrio abundance and season, either as free-living or plankton-associated entities, while Vibrio species abundance correlated positively with temperature (r = 0.565; P < 0.01), salinity and dissolved oxygen (P < 0.05). Turbidity and pH showed significant seasonal variation (P < 0.05) in both locations. The Vibrio strains showed the typical multi-antibiotic-resistance of an SXT element. They were resistant to sulfamethoxazole (Sul), trimethoprim (Tmp), cotrimoxazole (Cot), chloramphenicol (Chl) and streptomycin (Str), as well as other antibiotics such as ampicillin (Amp), penicillin (Pen), erythromycin (Ery), tetracycline (Tet), nalidixic acid (Nal), and gentamicin (Gen). The antibiotic resistance genes detected includes dfr18 and dfrA1 for trimethoprim; tetA, strB, floR, sul2 blaP1, for tetracycline, streptomycin, chloramphenicol, sulfamethoxazole and β-lactams respectively. A number of these genes were only recently described from clinical isolates, demonstrating genetic exchange between clinical and environmental Vibrio species. This study revealed that there was an adverse impact on the physicochemical characteristics of the receiving watershed as a result of the discharge of inadequately treated effluents from the wastewater treatment facilities. The occurrence of Vibrio species as plankton-associated entities confirms the role of plankton as potential reservoir for this pathogen. Also the treated final effluents are reservoirs of various antibiotics resistance genes. This could pose significant health and environmental risk to the biotic component of the environment including communities that rely on the receiving water for domestic purposes and may also affect the health status of the aquatic milieu in the receiving water. There is need for consistent monitoring programme by appropriate regulatory agencies to ensure compliance of the wastewater treatment facilities to regulatory effluent quality standards.
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- Date Issued: 2010
Suitability of the leaf-mining fly, Pseudonapomyza sp. (Diptera: Agromyzidae), for biological control of Tecoma stans L. (Bignoniaceae) in South Africa
- Authors: Madire, Lulama Gracious
- Date: 2010
- Subjects: Diptera -- Biological control , Bignoniaceae -- Biological control , Plants, Ornamental -- Diseases and pests , Agromyzidae
- Language: English
- Type: Thesis , Masters , MSc (Zoology)
- Identifier: vital:11790 , http://hdl.handle.net/10353/255 , Diptera -- Biological control , Bignoniaceae -- Biological control , Plants, Ornamental -- Diseases and pests , Agromyzidae
- Description: Tecoma stans (L.) Juss. Ex Kunth (Bignoniaceae) also known as yellow bells, has a native distribution from Northern Argentina, central America, Mexico and the Southern USA. In many warm climatic regions of the world, T. stans is commonly planted as an ornamental plant because of its yellow flowers, hence the name yellow bells, and pinnate foliage. As a result, this evergreen shrub has wide distribution in the tropical and subtropical parts of the western hemisphere. As is the case in many other parts of the world, T. stans was introduced into South Africa as an ornamental plant, but escaped cultivation and now invades roadsides, urban open spaces, watercourses, rocky sites in subtropical and tropical areas of five South African provinces; Gauteng, Mpumalanga, Limpopo, KwaZulu-Natal, Eastern Cape and neighboring countries. Tecoma stans has the potential of extending its range because its seeds are easily dispersed by wind. The purpose of this work was to carry out pre-release efficacy studies to determine the host specificity and suitability of Pseudonapomyza sp. (Diptera: Agromyzidae), a leaf-mining fly, as a biological control agent of T. stans. Available information suggests that the fly was brought to South Africa (SA) from Argentina in 2005. In that year a worker collected adult root feeding fleabeetles from T. stans and their eggs by collecting soil around the plants in the Argentinian Province of Jujuy, at San Pedro (24°12’592”S, 64°51’328”W). The soil was brought to the SA quarantine laboratory of the Agricultural Research Council, Plant Protection Research Institute (Weeds Division), Pretoria, and placed in a cage containing T. stans plants for flea-beetle larvae to emerge from the eggs. The Pseudonapomyza sp. flies which emerged from that soil were reared to produce a colony of flies used in the study reported here. The feeding behavior of Pseudonapomyza sp. adults is initiated by females which use their ovipositor to puncture holes in the leaf mesophyll and then they feed on the sap oozing from the holes. Since males have no means of puncturing the leaves, they feed from holes made by females. Eggs are laid singly into the tubular leaf punctures. Soon after hatching, the larva feeds on the leaf mesophyll tissue. As the larva feeds within the leaf it creates mines which eventually coalesce to form large blotches. The damaged leaf area reduces the photosynthetic potential of the plant especially when damaged leaves dry and fall off the plants. The potential of Pseudonapomyza sp. as a biocontrol agent is enhanced by the fact that it has a high level of fecundity and a short life cycle. As a result, its populations can build up rapidly to exert a significant impact on T. stans. Host-specificity tests undertaken on 35 plant species in 12 plant families showed that out of the 35 plant species tested, the fly was able to develop on T. stans only. Although Pseudonapomyza sp. adults fed on T. capensis, a South African indigenous ornamental shrub, no larval mines were observed on this plant. This suggests two possibilities; either females of Pseudonapomyza sp. do not oviposit on T. capensis or oviposition takes place but larvae cannot feed and develop on this plant. These studies indicate that this fly is sufficiently host-specific, and can be released against T. stans without posing any threat to either commercial or indigenous plant species grown in South Africa. Experimental designs simulating high populations of Pseudonapomyza sp. showed that the impact of leaf mining fly on T. stans can cause approximately 56 percent aboveground biomass reduction. Other concurrent studies have also showed that low and high density fly infestations can cause 23 percent and 48 percent belowground biomass reductions, respectively. Based on the available information, it appears that Pseudonapomyza sp. may have the potential to reduce the invasive capacity of T. stans in the affected areas. In order to exert more herbivore pressure on T. stans, it is suggested that agents belonging to other feeding guilds, such as root-, stem- and seed-feeding insects, be considered for release to complement the leaf-feeding of Pseudonapomyza sp. An application to release this fly in SA has been submitted to one of the two regulatory authorities.
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- Date Issued: 2010
Studies on the nutritional value of seven accessions of cocoyam growing in South Africa
- Authors: Lewu, Muinat Nike
- Date: 2010
- Subjects: Taro , Nutrition , Field crops -- Nutrition , Taro -- Nutritional aspects
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:11305 , http://hdl.handle.net/10353/d1001054 , Taro , Nutrition , Field crops -- Nutrition , Taro -- Nutritional aspects
- Description: Cocoyam [Colocasia esculenta (L.) Schott] is widely cultivated as a staple food in the tropical and subtropical regions of the world. The crop, however, remains unpopular and not well known outside KwaZulu-Natal Province of South Africa where it is cultivated mainly for subsistence. The aims of the study were to collect local landraces (accessions) of the crop from where it is found growing within the country for various studies and also to document its nutritional values as well as the safety/toxicity of the crop. The study was carried out using various methods. These included a comparative assessment of the proximate, mineral and antinutrient compositions of cooked and uncooked tubers of a typical commercially available cocoyam and potato found in South African markets. These investigations were repeated for the tubers and leaves of available landraces (seven accessions) of C. esculenta found growing in the farmers’ fields in KwaZulu-Natal Province. Also, an in vivo toxicological study on cooked accessions of the local landraces was conducted to determine possible toxicity effects after consumption using albino rats as a model. The results revealed that commercially available cocoyam and potato tubers have very close nutritional components. Analysis of the proximate composition of seven accessions (UFCe1- UFCe7) of cooked and uncooked tubers of cocoyam indicated that UFCe7 was better in ash, crude protein, crude fibre and crude lipid contents but with higher moisture which could make it more vulnerable to microbial attack. No tubers of the seven accessions appeared to be ii outstandingly better than the others based on their mineral compositions. However, in terms of antinutritional factors, UFCe1, UFCe3 and UFCe7 had the least amounts of oxalate, tannins and phytate in their cooked states. It was discovered however, that the leaves of the accessions of this vegetable contain substantial amount of minerals, and therefore, can contribute significantly to the nutrient requirements of humans and could be recommended as a cheap source of nutrients in South Africa. None of the accessions was outstandingly better than the others in terms of their mineral contents and anti-nutritional factors. Moreover, the current study has shown that boiling the leaves of cocoyam prior to consumption is an effective way of reducing the antinutrient contents of the leaves of the plant thereby making it safe for consumption. The findings also revealed that cooking C. esculenta leaves may increase the levels of protein, fibre and lipid contents while cooking may also decrease the mineral, carbohydrate and caloric contents of the leaves of the accessions. The leafy vegetable may, therefore, be recommended as a cheap source of plant protein. Cooking improved the nutritive value as a result of the reduction in antinutrient levels, thereby improving the food quality in all the tuber and leaf samples used for this study. At the same time, cooked samples also suffered loss of some nutrients with respect to the proximate and mineral compositions. However, supplementation from other food sources that are rich in these nutrients is necessary when these crops are cooked for consumption. Any of the cocoyam accessions may be recommended for consumption for improved protein and mineral nutrients while tubers of accession UFCe7 have also shown good promise in terms of protein and fibre content availability. The results of the in vivo study, using the liver and kidney functional endpoints of weanling albino rats (Rattus norvegicus) maintained on different accessions of cooked cocoyam-based iii diets (UFCe1-UFCe7) for 28 days, revealed that all the accessions produced selective alterations on the hepatorenal indices of weanling rats. The highest alterations were produced by UFCe4 while the least was from UFCe2. These alterations may have consequential effects on the normal functioning of the liver and kidney of the animals. The UFCe2 exhibited the least toxicity risk among the accessions of C. esculenta growing in KwaZulu-Natal Province of South Africa.
- Full Text:
- Date Issued: 2010
Stock farmers and the state: a case study of animal healthcare practices in Hertzog Eastern Cape Province South Africa
- Authors: Jenjezwa, Vimbai Rachel
- Date: 2010
- Subjects: Agriculture and state -- South Africa -- Eastern Cape , Traditional veterinary medicine -- South Africa -- Eastern Cape , Animal health , Domestic animals -- South Africa -- Eastern Cape
- Language: English
- Type: Thesis , Masters , MSc (Geography)
- Identifier: vital:11508 , http://hdl.handle.net/10353/269 , Agriculture and state -- South Africa -- Eastern Cape , Traditional veterinary medicine -- South Africa -- Eastern Cape , Animal health , Domestic animals -- South Africa -- Eastern Cape
- Description: The animal healthcare practices of most communal farmers involve the use of both conventional and ethnoveterinary medicines. This study presents information on the animal healthcare practices of stock farmers in Hertzog, Eastern Cape Province, South Africa. It also presents the findings on the social, economic and political aspects surrounding animal healthcare. The research applied two theories namely structuration theory and the Context, Practice and Belief (CPB) framework. Interviews and participant observation were used to collect data. The communal farmers widely used conventional medicines however, proper administration methods were not followed. Ethnoveterinary medicines were used to prevent and treat disease, even by the younger stock farmers. The stock farmers used ethnoveterinary medicines mainly because of the lack of finance to purchase the conventional medicines, even though the latter was preferred. The stock farmers actively participated in state programmes but felt that they needed more state veterinarian visits and state provided medications because they could not afford private veterinarians and conventional medicines. Therefore, this study attempts to contribute to an understanding of the use of ethnoveterinary medicine and communal farmers’ animal healthcare practices.
- Full Text:
- Date Issued: 2010
Statistical methods to model the influence of age and gender on the behavioral risk factors of HIV/AIDS
- Authors: Tlou, Boikhutso
- Date: 2010
- Subjects: AIDS (Disease) -- Statistics , HIV infections -- Statistics , AIDS (Disease) -- South Africa , Health risk assessment , HIV infections -- South Africa , AIDS (Disease) -- Social aspects
- Language: English
- Type: Thesis , Masters , MSc (Biostatistics and Epidemiology)
- Identifier: vital:11779 , http://hdl.handle.net/10353/400 , AIDS (Disease) -- Statistics , HIV infections -- Statistics , AIDS (Disease) -- South Africa , Health risk assessment , HIV infections -- South Africa , AIDS (Disease) -- Social aspects
- Description: The effects of gender and age on the behavioral risk of HIV/AIDS are not clearly understood as previous distinct studies which have been carried out, have given disputable and contradictory outcomes. This study therefore, discusses the statistical methods which can be used to model the influence of age and gender on the behavioral risk factors of HIV/AIDS. In general, generalized linear models are the main methods which can be applied to depict the impact of age and gender on the behavioral risk of becoming infected with HIV/AIDS virus. In this study, the main methods used were logistic regression, log-linear regression and multiple regressions. Behavioral risk was taken as the dependent variable while age, gender, number of sexual partners, religious beliefs and alcohol and drug abuse were fitted as predictor variables. The three statistical methods gave significant results for gender and insignificant results for age. Furthermore, comparisons were made on the three regression methods and the logistic regression gave the best results. It was therefore concluded that gender plays a significant role on the behavioral risk of HIV/AIDS. The results of the study showed that gender of the student and number of sexual partners had a significant effect on the risk behavior of the university students. In future, it may be very important to find out why age is not a significant factor on risk behavior of HIV/AIDS among university students.
- Full Text:
- Date Issued: 2010
Sheep production practices, flock dynamics, body condition and weight variation in two ecologically different resource-poor communal farming systems
- Authors: Mapiliyao, Luke
- Date: 2010
- Subjects: Sheep -- Breeding -- South Africa -- Eastern Cape , Sheep breeds -- South Africa -- Eastern Cape , Communal rangelands -- South Africa -- Eastern Cape , Sheep ranchers -- South Africa -- Eastern Cape , Sheep -- Feeding and feeds -- South Africa -- Eastern Cape , Forage , Grazing -- South Africa -- Eastern Cape , Sheep -- Diseases -- South Africa -- Eastern Cape
- Language: English
- Type: Thesis , Masters , MSc Agric (Animal Science)
- Identifier: vital:11816 , http://hdl.handle.net/10353/340 , http://hdl.handle.net/10353/d1001041 , Sheep -- Breeding -- South Africa -- Eastern Cape , Sheep breeds -- South Africa -- Eastern Cape , Communal rangelands -- South Africa -- Eastern Cape , Sheep ranchers -- South Africa -- Eastern Cape , Sheep -- Feeding and feeds -- South Africa -- Eastern Cape , Forage , Grazing -- South Africa -- Eastern Cape , Sheep -- Diseases -- South Africa -- Eastern Cape
- Description: The objective of this study was to determine sheep production practices, constraints, flock dynamics, body condition and weight variation in two ecologically different resource-poor communal farming systems of the Eastern Cape Province of South Africa. Mean sheep flock sizes per household were not significantly different between the two ecologically different areas (villages); Gaga (19.0±3.10) and Sompondo (18.3±3.10). Shortage of feed, disease and parasite were reported the most important constraints across the two villages. In both villages, sheep housing was poorly constructed using acacia brushwoods. Fewer farmers owned rams: the rams to ewes ratio for the two villages were 1:20, 1:19 for Gaga and Sompondo, respectively. The low ram: ewe ratios reported suggest that inbreeding might have been reducing productivity of their flocks. There was also uncontrolled breeding due to undefined and mating seasons. Gall sickness, heart water and footrot caused most of the sheep mortalities. Dohne Merinos were the common genotypes in the two villages. Total entrances for each flock were higher (p < 0.05) in hot-dry season and hot-wet season than in other seasons. Most of the entrances were lambs and were born in hot-dry season (September) and cool-dry season (June) for larger flocks (10.90 ± 3.02) and for small flocks (3.65 ± 3.02). High lamb mortalities were experienced in the post-rainy (April) and hot-wet (December) season. There was a significant interaction between season and flock size. Most of the sales occurred in the hot-wet season. Ecological area had significant effect on sheep production potential (p < 0.05) in both flock classes. The average sheep production efficiency (SPE) value for Gaga and Sompondo were 0.50 ± 0.116 and 0.50 ± 0.096 respectively. The SPE for large flock was higher (p < 0.05) by season and flock size. Large flocks had a higher (p < 0.05) SPE values and the SPE ranged from 1.11 ± 0.193 in April, a post-rainy season month to 1.55 ± 0.193 in December, a hot-wet season month. Lamb mortalities constituted the greater part of outflows. High lamb mortalities occurred in hot-wet (December), hot-dry (September) and post-rainy (April) seasons. There was a significant interaction between season and age of sheep on body weight of sheep. Highest (p < 0.05) body weights were recorded in the post-rainy and autumn season in both lambs and ewes. It is therefore very important to come up with affordable interventions which take into play ecological differences of the areas for improved nutritional status of sheep in communal areas which will lead to improved sheep productivity and the poor-resourced farmer human nutritional and livelihood.
- Full Text:
- Date Issued: 2010
Prevalence of listeria pathogens in effluents of some wastewater treatment facilities in the Eastern Cape province of South Africa
- Authors: Odjadjare, Emmanuel Erufuare Onogwuwhenya
- Date: 2010
- Subjects: Listeria -- South Africa -- Eastern Cape , Sewage -- Purification -- South Africa -- Eastern Cape , Effluent quality -- South Africa -- Eastern Cape , Water -- Pollution -- South Africa -- Eastern Cape , Water -- Purification -- South Africa -- Eastern Cape
- Language: English
- Type: Thesis , Doctoral , PhD (Microbiology)
- Identifier: vital:11264 , http://hdl.handle.net/10353/246 , Listeria -- South Africa -- Eastern Cape , Sewage -- Purification -- South Africa -- Eastern Cape , Effluent quality -- South Africa -- Eastern Cape , Water -- Pollution -- South Africa -- Eastern Cape , Water -- Purification -- South Africa -- Eastern Cape
- Description: Wastewater discharges may contain health compromising pathogens and carcinogenic and/or chemical substances that could compromise the public health and impact negatively on the environment. The present study was conducted between August 2007 and July 2008 to evaluate the Listeria abundance (as free-living and plankton associated species) and physicochemical qualities of the final effluents of three wastewater treatment facilities in the Eastern Cape Province of South Africa selected to represent typical urban, peri-urban and rural communities and the impact of the discharged final effluents on their respective receiving watershed, as well as to elucidated the in vitro antibiotic susceptibilities and resistance genes profile of Listeria species isolated from the final effluents. The suitability of the secondary effluent of the urban treatment facility (as a case study) for use in agriculture and aquaculture with reference to recommended standards was also determined. Wastewater samples were collected from the raw sewage, secondary effluent, final treated effluent, discharge point, 500 m upstream discharge point, and 500 m downstream discharge point from all three locations on a monthly basis throughout the study period. Listeria abundance in the final effluents and the receiving watersheds varied between 2.9× 100 and 3.52 × 105cfu/ml across the sampled locations. Free-living listerial density across the sampled locations ranged between 0 and 3.2 × 103cfu/ml while counts of Listeria species attached to large (180 μm) planktons varied from 0 to 1.58 × 105 cfu/ml and those of the 60 and 20 μm categories were in the range of 0 to 1.32 × 103 cfu/ml and 0 to 2.82 × 105 cfu/ml respectively. Listeria abundance did not vary significantly with location and season; there was however, significant (P < 0.05; P < 0.01) variance in Listeria abundance with plankton sizes across the locations. Free-living Listeria species were more abundant in the rural and urban xii communities than plankton attached Listeria species; whereas the reverse was the case in the peri-urban community. Prevalence of Listeria in terms of total counts was 100 percent across all sampled locations. Free-living Listeria species showed prevalence ranging from 84-96 percent across the sampling locations; while Listeria species attached to large (180 μm) planktons exhibited prevalence ranging from 75 percent to 90 percent. The prevalence of medium-sized (60 μm) plankton associated Listeria species varied between 58 percent and 92.5 percent; whereas those of Listeria species attached to small (20 μm) planktons ranged from 65-100 percent across all three communities. Listeria prevalence was generally a reflection of the turbidity of the water system, with free-living Listeria species being more prevalent than plankton associated cells in the relatively less turbid rural and urban waters compared to the more turbid peri-urban waters where plankton attached cells were more prevalent in comparison with their free living counterparts The final treated effluent quality fell short of recommended standards for turbidity, chemical oxygen demand and phosphate across all three communities. In addition, the final effluent of the rural treatment plant also fell short of recommended standard for NO3, while that of the urban treatment plant did not comply with acceptable limits for dissolved oxygen and nitrite. Other physicochemical parameters were compliant with set standards after treatment. An inverse relationship was observed between chlorine residual and listerial density across the sampled facilities; the effect of chlorine was however not enough to eliminate the pathogen from the water systems. At the urban treatment plant and its receiving watershed, pH, temperature, EC, turbidity, TDS, DO, and nitrate varied significantly with season and sampling point (P < 0.05; P < 0.01). Salinity also varied significantly with sampling point (P < 0.01), while COD and nitrite varied significantly with season (P < 0.05). Although, the treated effluent fell within recommended water quality standard for pH, TDS, nitrate and nitrite, it fell short of stipulated standards for other parameters. Whereas the microbial quality of the secondary treated effluent at this (urban) facility fell short of recommended standard after secondary treatment, its physicochemical quality were generally compliant with recommended standards for reuse wastewater in agriculture and aquaculture. Listeria pathogens isolated from effluents of the rural wastewater facility were sensitive to 11 (55 percent) of the 20 test antibiotics, and showed varying (7-71 percent) levels of resistance to 8 antibiotics; whereas those isolated from the peri-urban community showed sensitivity to 6 (30 percent) of the 20 test antibiotics, and varying (6-94 percent) levels of resistance to 12 antibiotics; while the urban effluent isolates were sensitive to 3 (15 percent) of the 20 test antibiotics, and showed varying (4.5-91 percent) levels of resistance to 17 antibiotics. Multiple antibiotic resistances involving 78.5-100 percent of isolates and antibiotics combination ranging from 2-10 antibiotics was observed across the sampled locations. Penicillin G and ampicillin showed remarkably high (64-91 percent) phenotypic resistance across the three sampled facilities. Other antibiotics, to which isolates showed significant resistance, were linezolid (22-88 percent); erythromycin (43-94 percent) and sulphamethoxazole (7-94 percent). Two of the 14 Listeria strains isolated from the rural effluents were positive for ereA and sul1 antibiotic resistance genes; while sulII genes were detected in five of the 23 Listeria isolates from the urban effluent and none was detected in isolates from the peri-urban community. The presence of antimicrobial resistance genes in the isolates did not correlate with phenotypic antibiotic resistance. The current study demonstrated that Listeria pathogens easily survived the activated sludge treatment process as free-living and plankton attached entities and suggests that municipal wastewater treatment plants are a significant source of multiple resistant Listeria pathogens in the South African aquatic milieu. While the physicochemical quality of the urban final effluent suggests that it is a major source of pollution to the receiving watershed, the secondary effluent quality demonstrated a great potential for use in agriculture and aquaculture.
- Full Text:
- Date Issued: 2010
Prevalence and risk factors for Helicobacter pylori transmission in the Eastern Cape Province application of immunological molecular and demographic methods
- Authors: Dube, Callote
- Date: 2010
- Subjects: Helicobacter pylori , Bacterial diseases , Gastritis -- Risk factors , Bacterial diseases -- Risk factors , Gram-negative bacteria , Gram-negative bacterial infections , Helicobacter , Helicobacter infections , Helicobacter pylori -- South Africa -- Eastern Cape
- Language: English
- Type: Thesis , Masters , MSc (Microbiology)
- Identifier: vital:11262 , http://hdl.handle.net/10353/265 , Helicobacter pylori , Bacterial diseases , Gastritis -- Risk factors , Bacterial diseases -- Risk factors , Gram-negative bacteria , Gram-negative bacterial infections , Helicobacter , Helicobacter infections , Helicobacter pylori -- South Africa -- Eastern Cape
- Description: Helicobacter pylori (H. pylori) is a microaerophilic, Gram-negative motile curved rod that inhabits the gastric mucosa of the human stomach. The organism chronically infects billions of people worldwide and is one of the most genetically diverse of bacterial species. Infection with the organism potentially induces chronic gastritis and peptic ulcer disease. In addition, H. pylori plays a role in the etiology of gastric cancer and gastric MALT lymphoma. The risk of infection is increased in those living in the developing world, which has been ascribed to precarious hygiene standards, crowded households, and deficient sanitation common in this part of the world. Thus, the aim of this study was to identify the risk factors in the transmission of H. pylori in our environment, i.e. in Nkonkobe Municipality in the Eastern Cape Province, South Africa. Faecal samples were collected from 356 apparently healthy subjects, consisting of 168 males and 188 females aged from 3 months to 60 years (Mean = 31 years). A standardized questionnaire was applied, it described demographic characteristics including age, sex, household hygiene, socioeconomic status, area of residence, duration of stay in the area, sharing bath water, sharing tooth brush, habit of sucking thumb, medication currently being taken or medication taken within the past three months, source of water, type of toilet used, education and occupation. A sandwich-type enzyme immunoassay amplification technology (Amplified IDEIA TM Hp StAR TM , Oxoid, UK) was used to analyze the faecal samples for the detection of H. pylori antigens using monoclonal antibodies specific for H. pylori antigens. To assess the possibility of faecal oral route with tap water as an intermediary link, PCR targeting the ureC (glmM), a highly conserved gene in H. pylori ii was carried out to detect H. pylori DNA in faecal samples of already positive samples by HpSA test as well as in direct tap water used by the H. pylori positive subjects. QIAamp DNA stool mini kit was used to extract DNA from faecal samples. Tap water samples were then obtained using sterile bottles from areas inhabited by H. pylori positive subjects as determined by HpSA test and PCR. DNA extraction from water samples was done using UltraCleanTM Water DNA Isolation Kit (0.22μm) according to the manufacturer’s instructions. PCR with primers specific for H. pylori glmM gene was carried out with both positive and negative controls incorporated. Fisher’s exact test was used to assess the univariate association between H. pylori infection and the possible risk factors. Odds ratio (OR) and the corresponding 95 percent confidence interval (CI) were calculated to measure the strength of association using EPI INFO 3.41 package. P values of < .05 were required for significance. The precision rate of the diagnostic tests used was also determined. H. pylori antigen was detected in 316 of the 356 subjects giving an overall prevalence of 88.8 percent. Prevalence increased with age from 75.9 percent in children < 12 years age to 100 percent in the age group from 13 years to 24 years, also 100 percent prevalence of H. pylori was recorded in young adults aged 25-47 years and subjects aged 60 years (P < .05). H. pylori prevalence was higher in females than in males. Of 188 females who participated in the study, H. pylori antigen was detected in 172 (91.5 percent) versus 144 (85.7 percent) of 168 males (P > .05). Interestingly, H pylori antigen was detected more often (100 percent) in the high socioeconomic group than in those of low socioeconomic group (85.9 percent). Sixteen (66.7 percent) of twenty four faecal samples that had previously tested positive for the organism by HpSA test were confirmed positive by PCR. However none of the treated tap water samples tested positive for the organism by PCR. The present iii study revealed a high prevalence of H. pylori in faecal samples of asymptomatic individuals in the Nkonkobe Municipality, an indication of active infection. The obtained results also revealed that direct treated tap water might not be playing a crucial role in the oral transmission of H. pylori in the studied population.
- Full Text:
- Date Issued: 2010
Population biology and aspects of the socio-spatial organisation of the woodland dormouse Graphiurus Murinus (Desmaret, 1822) in the Great Fish River Reserve, South Africa
- Authors: Madikiza, Zimkitha Josephine Kimberly
- Date: 2010
- Subjects: Dormice , Mice , Muridae , Spatial behavior , Territoriality (Zoology) , Crowding stress
- Language: English
- Type: Thesis , Masters , MSc (Zoology)
- Identifier: vital:11788 , http://hdl.handle.net/10353/443 , Dormice , Mice , Muridae , Spatial behavior , Territoriality (Zoology) , Crowding stress
- Description: The population biology and socio-spatial organisation of the woodland dormouse, Graphiurus murinus (Desmarest, 1822), was investigated in a riverine forest at the Great Fish River Reserve (GFRR), South Africa. Data were collected by means of a monthly live trapping and nestbox monitoring programme. Between February 2006 and June 2007, 75 woodland dormice were trapped and/or found in nestboxes and marked: these were 39 adults (13 males, 21 females, five undetermined) and 36 juveniles (five males, 14 females, 17 undetermined). The population showed a steady increase from June 2006–November 2006 and a peak in December 2006–January 2007 as a result of the influx of juveniles. The minimum number of dormice known to be alive (MNA) varied between 40 in December 2006– January 2007 (summer), and a low of three in June 2007 (winter). The range in population density was therefore between 1.2 and 16 dormice per ha. Winter mortality and/or spring dispersal accounted for the disappearance of 55 percent of juveniles. The overall annual adult:juvenile ratio was 1.08. The overall sex ratio was 1.94 female per one male. In females, reproductive activity was observed from September 2006 to end January 2007. The pattern observed in males was similar, as dormice with descended testes were exclusively found from October to end January. Females gave birth during the second half of October to beginning of February. Litters (n = 11) consisted of an average (± SD) 3.73 ± 0.47 young. Over the study period, 27 dormice were trapped or found in nestboxes more than eight times, thus allowing me to estimate their home range size and the spatial overlap between these individuals. On average, dormouse home range size was 2,514 m2 (range: 319 – 4,863 m2). No difference was recorded between one-year old adults and older adults, or between all adults and juveniles. However, adult male dormice (3,989 m2, n = 5) had home ranges almost twice as large as females (2,091 m2, n = 9). No similar trend was found in juveniles. Intrasexual home range overlap was on average 62 percent in adult males, and 26 percent in adult females. However, females overlapped with more neighbouring female home ranges than did males with neighbouring male home ranges, so that, as for males, only small parts of female home ranges were really exclusive. On average, males overlapped a larger Abstract Ecology of woodland dormice M.Sc. Thesis 16 proportion (48 percent) of female home ranges than did females with neighbouring male home ranges (27 percent). In addition, males overlapped with significantly more female home ranges (7.8) than did females with male home ranges (4.9). Trapping success and nestbox data agree with the socio-ecological model. Females showed increased mobility during summer, more likely to find suitable nesting sites, and food for milk production during the reproductive season. The use of nestboxes, however, was constant throughout the year. In males, both the trapping success and nestbox use were higher during the mating season (spring), when an increased mobility and occupation of nestboxes probably increased the chances to locate and mate with (a) receptive female(s). Hence, food and (artificial) nest sites may constitute an important resource for females, whereas females seem to represent the main resource for males. Although food availability was not determined, a comparison of female and male distribution patterns provided interesting information on the mating system of woodland dormice. In GFRR, the dispersion pattern of female woodland dormice was “rather” clumped, i.e. females were non-territorial. As some females showed a dyadic intrasexual overlap of up to 90 percent, and population density was very high at the study site, this may indicate that food was very abundant and/or renewed rapidly. Based on the wide range of birth dates observed during the study period, females clearly come into oestrus at different times. In such circumstances (asynchronous sexual receptivity in females), the Female in Space and Time Hypothesis (Ims 1987a) predicts that males will be non-territorial and promiscuous. Live-trapping, nestbox use and home range data indeed suggested that male woodland dormice do not defend territories, but search for and aggregate around receptive females during the mating season.
- Full Text:
- Date Issued: 2010
Neotectonics and its applications for the exploration of groundwater in the fractured Karoo aquifers in the Eastern Cape,South Africa
- Authors: Madi, Kakaba
- Date: 2010
- Subjects: Water well drilling -- South Africa -- Eastern Cape , Aquifers -- South Africa -- Eastern Cape , Water -- supply engineering -- South Africa -- Eastern Cape , Prospecting -- Geophysical methods , Groundwater -- Research -- Methodology
- Language: English
- Type: Thesis , Masters , MSc (Geology)
- Identifier: vital:11523 , http://hdl.handle.net/10353/362 , Water well drilling -- South Africa -- Eastern Cape , Aquifers -- South Africa -- Eastern Cape , Water -- supply engineering -- South Africa -- Eastern Cape , Prospecting -- Geophysical methods , Groundwater -- Research -- Methodology
- Description: This study is part of an NRF sponsored research project entitled “Neotectonics and its applications for the exploration of groundwater in the fractured Karoo aquifers in the Eastern Cape” under the NRF Niche area of Water Resources Management and Sustainable Development in the Eastern Cape Province. The identification of relatively highly productive wells in the Karoo fractured aquifers is extremely difficult. This study aims to identify neotectonic zones and lower stress fields, and apply the results to groundwater exploration in the Eastern Cape Province. The methodologies adopted in this study include: a comprehensive literature review, extensive field mapping and investigation such as road cuts, sampling for laboratory studies, examination of seismic data, study of hot and ordinary springs, and interpretation of aerial photography and satellite images. Three main neotectonic belts were identified in the Eastern Cape (southern neotectonic belt, northern neotectonic belt and eastern neotectonic belt) based on literature review and field interpretations. The southern neotectonic belt (from the Cape Fold Belt to the lower Beaufort Group boundary) is characterized by the reactivation of the Coega-Bavianskloof and Sauer faults, the presence of a hot spring near Fort Beaufort, the slickenlines and discrete slickenlines and specifically the seismic events that were recorded in the Eastern Cape from 1850 to 2007. In this southern neotectonic belt the remote sensing has also revealed the presence of the Fort Beaufort fracture, the quartz veins seen in some dolerites and the different vegetation types along it may indicate that this fracture is possibly a fault; moreover the Quaternary sediments and weathered dolerites indicate that the Fort iii Beaufort fracture is characterized by groundwater circulation and accordingly is a good target for groundwater exploration, this fracture is a post-Karoo structure and possibly a neotectonic feature. In addition, the kaolin deposit, chiefly developed in the Dwyka tillite near Grahamstown is clearly controlled by neotectonic fracture zones. The northern neotectonic belt near the country of Lesotho is marked by the presence of the Senqu seismotectonic regime and hot springs. The Quaternary Amatole-Swaziland (formerly Ciskei-Swaziland) axis of uplift makes the eastern part of the province the third neotectonic zone, the asymmetric meanders of the Mbashe river in the vicinity of Qunu near Mthatha derived possibly from this Quaternary uplift; this asymmetric feature of meanders implies that the river has tried to maintain stability of its valley where tilting occurred. Within these neotectonic belts the central part of the Eastern Cape may be considered a static and inactive belt. A northwesterly trend for the maximum principal compresssional stress predominates in the Eastern Cape and is correlated with the present major structural control of the province. The current stress regime determination was derived from faults, joints and quartz veins only on kaolin deposits. Systematic joints reflect regional tectonic stress trajectories at the time of fracturing. Discharge rates of groundwater from boreholes as provided by the Department of Water and Forestry were used to confirm and predict water exploration targets. The region of Tabankulu (near Kwazulu Natal) in the northern neotectonic belt has remarkable discharge rates of groundwater (11.1 l/s, 4.65 l/s, 6.49 l/s, 42 l/s). The region of Mthatha, nearly surrounding the Amatole-Swaziland axis (former Ciskei-Swaziland iv axis) of uplift which might have generated some new faults, has a number of springs. These two regions should serve as case studies for future research. Apart from these two regions, two others regions can be considered as case studies for future groundwater exploration targets: the Bath Farm hot spring near the Fort Beaufort neotectonic fault and the vicinity of what is known as the Fort Beaufort fracture near Teba and Cimezile villages 20km north west of Fort Beaufort. It is concluded that the study of neotectonics and stress fields may be a useful tool for groundwater exploration in the Karoo fractured aquifers in the Eastern Cape, and in similar regions elsewhere in South Africa and in Africa.
- Full Text:
- Date Issued: 2010
Mobile phones interaction techniques for second economy people
- Authors: Edim, Azom Emmanuel
- Date: 2010
- Subjects: Rural development projects -- South Africa -- Eastern Cape , Poverty -- South Africa -- Eastern Cape , Cell phone systems -- South Africa -- Eastern Cape , User interfaces (Computer systems) , Human-computer interaction , Community development -- South Africa -- Eastern Cape
- Language: English
- Type: Thesis , Doctoral , PhD (Computer Science)
- Identifier: vital:11392 , http://hdl.handle.net/10353/519 , Rural development projects -- South Africa -- Eastern Cape , Poverty -- South Africa -- Eastern Cape , Cell phone systems -- South Africa -- Eastern Cape , User interfaces (Computer systems) , Human-computer interaction , Community development -- South Africa -- Eastern Cape
- Description: Second economy people in developing countries are people living in communities that are underserved in terms of basic amenities and social services. Due to literacy challenges and user accessibility problems in rural communities, it is often difficult to design user interfaces that conform to the capabilities and cultural experiences of low-literacy rural community users. Rural community users are technologically illiterate and lack the knowledge of the potential of information and communication technologies. In order to embrace new technology, users will need to perceive the user interface and application as useful and easy to interact with. This requires proper understanding of the users and their socio-cultural environment. This will enable the interfaces and interactions to conform to their behaviours, motivations as well as cultural experiences and preferences and thus enhance usability and user experience. Mobile phones have the potential to increase access to information and provide a platform for economic development in rural communities. Rural communities have economic potential in terms of agriculture and micro-enterprises. Information technology can be used to enhance socio-economic activities and improve rural livelihood. We conducted a study to design user interfaces for a mobile commerce application for micro-entrepreneurs in a rural community in South Africa. The aim of the study was to design mobile interfaces and interaction techniques that are easy to use and meet the cultural preferences and experiences of users who have little to no previous experience of mobile commerce technology. And also to explore the potentials of information technologies rural community users, and bring mobile added value services to rural micro-entrepreneurs. We applied a user-centred design approach in Dwesa community and used qualitative and quantitative research methods to collect data for the design of the user interfaces (graphic user interface and voice user interface) and mobile commerce application. We identified and used several interface elements to design and finally evaluate the graphical user interface. The statistics analysis of the evaluation results show that the users in the community have positive perception of the usefulness of the application, the ease of use and intention to use the application. Community users with no prior experience with this technology were able to learn and understand the interface, recorded minimum errors and a high level of v precision during task performance when they interacted with the shop-owner graphic user interface. The voice user interface designed in this study consists of two flavours (dual tone multi-frequency input and voice input) for rural users. The evaluation results show that community users recorded higher tasks successes and minimum errors with the dual tone multi-frequency input interface than the voice only input interface. Also, a higher percentage of users prefer the dual tone multi-frequency input interface. The t-Test statistical analysis performed on the tasks completion times and error rate show that there was significant statistical difference between the dual tone multi-frequency input interface and the voice input interface. The interfaces were easy to learn, understand and use. Properly designed user interfaces that meet the experience and capabilities of low-literacy users in rural areas will improve usability and users‟ experiences. Adaptation of interfaces to users‟ culture and preferences will enhance information services accessibility among different user groups in different regions. This will promote technology acceptance in rural communities for socio-economic benefits. The user interfaces presented in this study can be adapted to different cultures to provide similar services for marginalised communities in developing countries
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- Date Issued: 2010
Maximization of power in randomized clinical trials using the minimization treatment allocation technique
- Authors: Marange, Chioneso Show
- Date: 2010
- Subjects: Clinical trials -- Statistical methods , Statistical hypothesis testing , Regression analysis , Logistic distribution , Estimation theory
- Language: English
- Type: Thesis , Masters , MSc (Biostatistics and Epidemiology)
- Identifier: vital:11777 , http://hdl.handle.net/10353/399 , Clinical trials -- Statistical methods , Statistical hypothesis testing , Regression analysis , Logistic distribution , Estimation theory
- Description: Generally the primary goal of randomized clinical trials (RCT) is to make comparisons among two or more treatments hence clinical investigators require the most appropriate treatment allocation procedure to yield reliable results regardless of whether the ultimate data suggest a clinically important difference between the treatments being studied. Although recommended by many researchers, the utilization of minimization has been seldom reported in randomized trials mainly because of the controversy surrounding the statistical efficiency in detecting treatment effect and its complexity in implementation. Methods: A SAS simulation code was designed for allocating patients into two different treatment groups. Categorical prognostic factors were used together with multi-level response variables and demonstration of how simulation of data can help to determine the power of the minimization technique was carried out using ordinal logistic regression models. Results: Several scenarios were simulated in this study. Within the selected scenarios, increasing the sample size significantly increased the power of detecting the treatment effect. This was contrary to the case when the probability of allocation was decreased. Power did not change when the probability of allocation given that the treatment groups are balanced was increased. The probability of allocation { } k P was seen to be the only one with a significant effect on treatment balance. Conclusion: Maximum power can be achieved with a sample of size 300 although a small sample of size 200 can be adequate to attain at least 80% power. In order to have maximum power, the probability of allocation should be fixed at 0.75 and set to 0.5 if the treatment groups are equally balanced.
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- Date Issued: 2010
Manure production and nutrient management in pasture-based dairy production systems
- Authors: Svinurai, Walter
- Date: 2010
- Subjects: Manures , Nitrogen -- Metabolism , Aloe -- South Africa , Pine bark , Pastures , Dairy cattle -- Nutrition , Dairy cattle -- Management , Dairy cattle -- Feeding and feeds
- Language: English
- Type: Thesis , Masters , MSc Agric (Animal Science)
- Identifier: vital:11812 , http://hdl.handle.net/10353/475 , Manures , Nitrogen -- Metabolism , Aloe -- South Africa , Pine bark , Pastures , Dairy cattle -- Nutrition , Dairy cattle -- Management , Dairy cattle -- Feeding and feeds
- Description: Manure production and nutrient management in pasture-based dairy production systems by Walter Svinurai The effect of dietary treatments on nutrient excretion was determined and an attempt to improving the retention of excreted nitrogen in stored manure using Aloe ferox leaf gel (AFLG) and pine bark was conducted at a pasture-based dairy farm. The animal mass-balance method was used to determine nutrient excretion by cows fed on three dietary treatments, Lolium perrene-based treatment (LP), Lolium multiforium-based treatment (LM) and Lolium perenne- Trifolium repens -based treatment (LTF). In separate experiments, slurry from dairy cows fed LM was amended with AFLG and pine bark at concentrations of 25, 50, 75 and 100 g/l and stored under anaerobic conditions for 16 days. The highest and lowest excretions of N, P and K were observed in LM and LP treatments, respectively. Increasing dietary N improved K and N retention in milk and, consequently increased milk urea nitrogen (MUN) and N excretion (P < 0.05). The concentrations of AFLG affected N and P retention in manure (P < 0.05). The highest retention in total Kjeldahl nitrogen (TKN) of the initial was 42% AFLG at 25g/l inclusion rate. Ammonium nitrogen (AMN) concentration increased significantly due to the interactive effect of AFLG inclusion rate and time. Pine bark powder significantly improved N and P retention in manure at all concentrations. The retention in TKN was higher (P < 0.05) at 25g/l pine bark powder than other concentrations. The interaction effect of inclusion rate and time increased iii AMN (P < 0.05). Dietary treatments significantly affected nutrient excretion, and AFLG and pine bark considerably improved N retention in stored slurry. Findings from the filed trial suggest the need for more attention on managing dietary nutrients in the post-rainy and cool-dry season when growth of pasture influenced choice of dietary treatments that led to high nutrient excretion. Field simulation of the additives to determine their efficacy and environmental hazards was recommended.
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- Date Issued: 2010
Local economic development: a case study of the Blue Crane Route Municipality, Eastern Cape, South Africa
- Authors: Boose, Refuoe
- Date: 2010
- Subjects: Local government -- South Africa -- Eastern Cape , Sustainable development -- South Africa -- Eastern Cape , Rural-urban relations -- South Africa -- Eastern Cape
- Language: English
- Type: Thesis , Doctoral , PhD (Geography)
- Identifier: vital:11509 , http://hdl.handle.net/10353/248 , Local government -- South Africa -- Eastern Cape , Sustainable development -- South Africa -- Eastern Cape , Rural-urban relations -- South Africa -- Eastern Cape
- Description: Local economic development (LED) in the countries of the North is a voluntary activity of local government, in South Africa it is a mandatory activity. The purpose of LED is to build the capacity of a local area to improve its economic future and the quality of life for all. While local governments in South Africa are currently engaged with the concept of LED which is seen as a tool through which to achieve sustainable development, it is now recognized that there exists economic, social and environmental interdependence between rural and urban areas and a need for a balanced and mutually supportive approach to development of the rural and urban areas. Adopting the Rural-Urban, Economic and Enterprise Development (RUEED) concept, this study highlights the challenges and development problems experienced by the deep rural and urban communities in the implementation of LED activities within the Blue Crane Route Municipality (BCRM) due to the lack of social, economic and environmental sustainability and rural-urban linkages. This study located in the Blue Crane Route Municipality in the Eastern Cape, seeks to investigate and recommend a map or strategies linking together the urban communities with the poorer neighbourhoods in LED activities. The intensive research design that incorporates the case study method was used to achieve the objectives of this study. The empirical findings of the research indicate that the concept of rural-urban linkages is not an adopted strategy in implementing development programmes resulting in deep rural communities being excluded in LED activities initiated within the Blue Crane Route Municipality. The findings also reveal that the creation of employment opportunities and improvement in the standard of living are important dimensions of LED and rural-urban linkages. This study therefore recommends the adoption of a new perspective referred to as the rural-urban linkages for LED and the consideration of economic, social and environmental complementaries that exist between rural and urban areas in the Blue Crane Route Municipality. The study further indicates that it is critical that the LED policy and interventions reflect the existing patterns of interactions between the rural and urban areas of the Municipality.
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- Date Issued: 2010
Investigation and development of an e judiciary service for a citizen oriented judiciary system for rural communities
- Authors: Scott, Mfundo Shakes
- Date: 2010
- Subjects: Digital divide -- South Africa -- Eastern Cape , Rural development projects -- South Africa -- Eastern Cape , Community development -- South Africa -- Eastern Cape , User interfaces (Computer systems)
- Language: English
- Type: Thesis , Masters , MSc (Computer Science)
- Identifier: vital:11390 , http://hdl.handle.net/10353/275 , Digital divide -- South Africa -- Eastern Cape , Rural development projects -- South Africa -- Eastern Cape , Community development -- South Africa -- Eastern Cape , User interfaces (Computer systems)
- Description: One of the factors that contribute towards slow rural development is the presence of the digital divide. An area where the digital divide is still prevalent is the administration of justice within traditional contexts. One of the areas affected by this problem is the Dwesa rural community, situated on the Wild Coast of the former homeland of Transkei, in the Eastern Cape Province of South Africa. To address this problem for the Dwesa community, a research project on developing and implementing an e-Judiciary service was undertaken. The primary objective of this project was to develop a web application to support traditional justice administration in the Dwesa community. Due to the lack of a proper legal environment in this community, the e-Judiciary service acts as a portal for safe-keeping of judicial information. Such a system also serves as a platform for the administration of minor offences that are solved by the traditional courts. Furthermore, it provides a better working environment for traditional judicial leaders and eliminates the difficulty of accessing legal information by the rest of the community. Through the availability and use of the service, community members are provided with understanding and knowledge about judiciary operations and services in their community.
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- Date Issued: 2010
Influence of mite predation on the efficacy of the gall midge Dasineura sp. as a biocontrol agent of Australian myrtle Leptospermum laevigatum (Myrtaceae) in South Africa
- Authors: Mdlangu, Thabisa Lynette Honey
- Date: 2010
- Subjects: Dasyneura leguminicola , Myrtaceae -- South Africa , Mites as biological pest control agents , Pests -- Biological control , Biological pest control agents , Predation (Biology)
- Language: English
- Type: Thesis , Masters , MSc (Zoology)
- Identifier: vital:11789 , http://hdl.handle.net/10353/272 , Dasyneura leguminicola , Myrtaceae -- South Africa , Mites as biological pest control agents , Pests -- Biological control , Biological pest control agents , Predation (Biology)
- Description: Dasineura sp. is a gall forming midge that was introduced into South Africa for the biocontrol of the Australian myrtle, Leptospermum laevigatum. It causes galls on both the vegetative and reproductive buds of the plant. Although Dasineura sp. was initially regarded as a potentially successful agent, galling up to 99 percent of the buds of the host plant, it has been preyed on by native opportunistic mites, which caused a decline in the performance of the midge as a biocontrol agent of L. laevigatum. This raised a concern about whether this fly will be able to perform effectively in the presence of its new natural enemies. Therefore, the objectives of this study were to: 1) ascertain whether mite abundance has seasonal variations; 2) determine if plant density and plant size have an effect on midge predation by the mites; and 3) determine if midge predation varies in different locations. The study was conducted at three sites in the Hermanus area, Western Cape Province. Every three weeks for thirteen months, galls were collected and dissected so as to count and record the numbers of midge larvae, pupae, adults and mites that were found. Data collected showed that predation varied with season, and the mites were scarce during the flowering season. Predation also varied among the study sites and plant density had an effect on midge predation. Midges in smaller plants (saplings) were more vulnerable to predation than those in the bigger plants (plants from isolates and thickets). It was concluded that although mites have an effect on midge populations, they do not prevent their establishment on the plant. Therefore, a survey should be done in two to three years time to check if the midges are still persisting on the plant, vi and recommendations are that a new agent should be released to supplement the midges.
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- Date Issued: 2010