A physiological study on a commercial reef fish to quantify the relationship between exploitation and climate change resilience
- Authors: Duncan, Murray Ian
- Date: 2019
- Subjects: Chrysoblephus laticeps -- Climatic factors , Chrysoblephus laticeps -- Physiology , Sparidae -- South Africa -- Climatic factors , Reef fishes -- South Africa -- Climatic factors , Fish populations -- South Africa -- Climatic factors , Fish populations -- Measurement , Fish populations -- Monitoring , Fisheries -- South Africa -- Environmental aspects , Ocean temperature -- Physiological effect -- South Africa
- Language: English
- Type: text , Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10962/76541 , vital:30599
- Description: The persistence of harvested fish populations in the Anthropocene will be determined, above all, by how they respond to the interacting effects of climate change and fisheries exploitation. Predicting how populations will respond to both these threats is essential for any adaptive and sustainable management strategy. The response of fish populations to climate change is underpinned by physiological rates and tolerances, and emerging evidence suggests there may be physiological-based selection in capture fisheries. By quantifying important physiological rates of a model species, the endemic seabream, Chrysoblephus laticeps, across ecologically relevant thermal gradients and from populations subjected to varying intensities of commercial exploitation, this thesis aimed to 1) provide the first physiologically grounded climate resilience assessment for a South African linefish species, and 2) elucidate whether exploitation can drive populations to less physiologically resilient states in response to climate change. To identify physiologically limiting sea temperatures and to determine if exploitation alters physiological trait distributions, an intermittent flow respirometry experiment was used to test the metabolic response of spatially protected and exploited populations of C. laticeps to acute thermal variability. Exploited populations showed reduced metabolic phenotype diversity, fewer high-performance aerobic scope phenotypes, and a significantly lower aerobic scope curve across all test temperatures. Although both populations maintained a relatively high aerobic scope across a wide thermal range, their metabolic rates were compromised when extreme cold events were simulated (8 °C), suggesting that predicted future increases in upwelling frequency and intensity may be the primary limiting factor in a more thermally variable future ocean. The increment widths of annuli in the otoliths of C. laticeps from contemporary and historic collections were measured, as a proxy for the annual growth rate of exploited and protected populations. Hierarchical mixed models were used to partition growth variation within and among individuals and ascribe growth to intrinsic and extrinsic effects. The best model for the protected population indicated that the growth response of C. laticeps was poorer during years characterised by a high cumulative upwelling intensity, and better during years characterised by higher mean autumn sea surface temperatures. The exploited population growth chronology was too short to identify an extrinsic growth driver. The growth results again highlight the role of thermal variability in modulating the response of C. laticeps to its ambient environment and indicate that the predicted increases in upwelling frequency and intensity may constrain future growth rates of this species. A metabolic index (ϕ), representing the ratio of O2 supply to demand at various temperatures and oxygen concentrations, was estimated for exploited and protected populations of C. laticeps and used to predict future distribution responses. There was no difference in the laboratory calibrations of ϕ between populations, and all data was subsequently combined into a single piecewise (12 °C) calibrated ϕ model. To predict the distribution of C. laticeps, ϕ was projected across a high-resolution ocean model of the South African coastal zone, and a species distribution model implemented using the random forest algorithm and C. laticeps occurrence points. The future distribution of C. laticeps was estimated by predicting trained models across ocean model projections up to 2100. The best predictor of C. laticeps’ current distribution was minimum monthly ϕ and future predictions indicated only a slight range contraction on either edge of C. laticeps’ distribution by 2100. In order to provide policy makers, currently developing climate change management frameworks for South Africa’s ocean, with a usable output, the results of all research chapters were combined into a marine spatial model. The spatial model identified areas where C. laticeps is predicted to be resilient to climate change in terms of physiology, growth and distribution responses, which can then be prioritised for adaptation measures, such as spatial protection from exploitation. While these results are specific to C. laticeps, the methodology developed to identify areas of climate resilience has broad applications across taxa. From a global perspective, perhaps the most salient points to consider from this case study are the evidence of selective exploitation on physiological traits and the importance of environmental variability, rather than long-term mean climate changes, in affecting organism performance. These ideas are congruent with the current paradigm shift in how we think of the ocean, selective fisheries, and how they relate to organism climate resilience.
- Full Text:
- Date Issued: 2019
Secret sex lives in the intertidal: insights into the mating systems of clinid fishes from molecular parentage analyses
- Authors: Scheeper, Martinus Johannes
- Date: 2019
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/72438 , vital:30048
- Description: Expected release date-April 2020
- Full Text: false
- Date Issued: 2019
The development of a larval feeding regimen for dusky kob, Argyrosomus japonicus, with a specific focus on the effect of weaning period on larval development and survival
- Authors: Keet, Thomas
- Date: 2019
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/96897 , vital:31344
- Description: One of the biggest limiting factors in marine finfish aquaculture is the low survival rate of early-stage larvae. Most mortalities can be ascribed to the poor nutritional value of live feeds, sibling cannibalism, and various stressors that result in swim bladder hyperinflation and/or starvation during the larval stage. Research results vary on the best timing for the introduction of artificial feed for good survival and growth rate in dusky kob larvae. The main objective of this experiment was to improve survival and growth rate. The experiment focused on a new feeding regime that sought to wean larvae onto an artificial diet earlier than the current Argyrosomus japonicus standard (weaning commenced at 16 days after hatch (DAH) versus 20 days after hatch), based on findings and recommendations made by Musson & Kaiser (2014). Three trials were conducted, each with five replicates of the two treatments, namely the new feeding regime and the standard feeding regime in a fully randomised design. Samples from each tank were collected every two days for the duration of the trial. Morphometric measurements (standard length; body depth; eye diameter) obtained from these sample larvae were used to compare growth rates between treatments. The ratio of BD:SL was used to assess larval condition throughout each trial. Tank survival rates were calculated on the last day of each trial.The study indicated that in mean water temperatures ranging from 24.3 – 25.2 °C, dusky kob larvae can be weaned onto an artificial pellet diet from 16 - 21 DAH without any negative effects on growth, condition and survival. Results from the highest mean temperatures of Trial 2 show a better mean condition in the treatment group during the weaning period (p < 0.05). In Trial 3, with its lower mean water temperatures of 23.2 °C, larvae in both treatments showed stunted absolute growth rates of all biometrics when compared to results from the higher mean temperatures of Trials 1 and 2. During the first 6 days of Trial 3 larvae were in relatively poor condition, BD:SL ≤ 0.30. During this same period in Trials 1 and 2, mean BD:SL ≥ 0.31, suggesting that a BD:SL ratio of ≤ 0.30 in non-weaned dusky kob larvae is an indicator of a degree of starvation. A future study on the morphology and histology of the larval gastrointestinal tract, specifically the liver and intestines, and how this early weaning regime affects their ontogeny under differing temperature conditions this needed to investigate the validity of these initial data on dusky kob larvae condition.
- Full Text:
- Date Issued: 2019
The development of a larval feeding regimen for dusky kob, Argyrosomus japonicus, with a specific focus on the effect of weaning period on larval development and survival
- Authors: Keet, Thomas
- Date: 2019
- Subjects: Argyrosomus japonicus , Argyrosomus , Argyrosomus japonicus -- Larvae , Argyrosomus -- Larvae , Argyrosomus japonicus -- Larvae -- Nutrition , Argyrosomus -- Larvae -- Nutrition
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/146577 , vital:38538
- Description: One of the biggest limiting factors in marine finfish aquaculture is the low survival rate of early-stage larvae. Most mortalities can be ascribed to the poor nutritional value of live feeds, sibling cannibalism, and various stressors that result in swim bladder hyperinflation and/or starvation during the larval stage. Research results vary on the best timing for the introduction of artificial feed for good survival and growth rate in dusky kob larvae. The main objective of this experiment was to improve survival and growth rate. The experiment focused on a new feeding regime that sought to wean larvae onto an artificial diet earlier than the current Argyrosomus japonicus standard (weaning commenced at 16 days after hatch (DAH) versus 20 days after hatch), based on findings and recommendations made by Musson & Kaiser (2014). Three trials were conducted, each with five replicates of the two treatments, namely the new feeding regime and the standard feeding regime in a fully randomised design. Samples from each tank were collected every two days for the duration of the trial. Morphometric measurements (standard length; body depth; eye diameter) obtained from these sample larvae were used to compare growth rates between treatments. The ratio of BD:SL was used to assess larval condition throughout each trial. Tank survival rates were calculated on the last day of each trial.The study indicated that in mean water temperatures ranging from 24.3 – 25.2 °C, dusky kob larvae can be weaned onto an artificial pellet diet from 16 - 21 DAH without any negative effects on growth, condition and survival. Results from the highest mean temperatures of Trial 2 show a better mean condition in the treatment group during the weaning period (p < 0.05). In Trial 3, with its lower mean water temperatures of 23.2 °C, larvae in both treatments showed stunted absolute growth rates of all biometrics when compared to results from the higher mean temperatures of Trials 1 and 2. During the first 6 days of Trial 3 larvae were in relatively poor condition, BD:SL ≤ 0.30. During this same period in Trials 1 and 2, mean BD:SL ≥ 0.31, suggesting that a BD:SL ratio of ≤ 0.30 in non-weaned dusky kob larvae is an indicator of a degree of starvation. A future study on the morphology and histology of the larval gastrointestinal tract, specifically the liver and intestines, and how this early weaning regime affects their ontogeny under differing temperature conditions this needed to investigate the validity of these initial data on dusky kob larvae condition.
- Full Text:
- Date Issued: 2019
The effect of bait on fine-scale habitat associations of reef fish investigated with remote underwater video systems
- Authors: Schmidt, Nicholas C
- Date: 2019
- Subjects: Baited remote underwater stereo-video systems (stereo-BRUVs) , Remote underwater stereo-video systems , Underwater videography in wildlife monitoring -- South Africa -- Tsitsikamma , Fish stock assessment -- South Africa -- Tsitsikamma , Fish populations -- Monitoring -- South Africa -- Tsitsikamma , Fishes -- Habitat -- South Africa -- Tsitsikamma
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/68380 , vital:29249
- Description: Establishing the associations between fish and their habitats can aid in the monitoring of fish stocks and the design of effective marine protected areas (MPAs). Baited remote underwater stereo-video systems (stereo-BRUVs) are now commonly used to asses fish populations. The habitats seen in the video footage of stereo-BRUVs can be used to link fish fauna to preferred habitat types. However, the application of bait potentially attracts fish from surrounding habitats, and might result in a biased understanding of fish–habitat associations. A field study was conducted in the Tsitsikamma National Park MPA to determine the effect of bait on fine-scale fish–habitat associations, using remote photographic and video methods. The study was conducted over the summer season of 2015 and 2016. Data were collected within a 1x1 km shallow (9–44 m) reef complex. Within the sampling area, 944 photo-quadrats of the macrobenthos were taken 30 m apart by means of a drop camera. By separating the macrobenthos into broad taxonomic groups, five habitat types were identified, namely Shallow Sand, Shallow Reef, Deep Reef, Deep Sand and Patch Reef. The results show that even on a fine scale, depth is an important predictor of macrobenthic distribution and assemblage structure. Baited (stereo-BRUVs) and unbaited (stereo-RUVs) surveys were then conducted to sample the fish community in the same area during the period under study. Higher abundances of fish were observed in reef than in sandy habitats, and bait was seen to have a positive effect on species richness and fish abundance. When comparing habitats, fish abundance and composition on reef habitats were significantly different from sand habitats. This was observed in both the stereo-RUVs and stereo-BRUVs methods. High counts of roman (Chrysoblephus laticeps), fransmadam (Boopsoidea inornata) and steentjie (Spondyliosoma emarginatum) in reef habitats were contrasted by high counts of white sea catfish (Galeichthys feliceps), evil-eye puffer (Amblyrhynchotes honckenii) and lesser guitarfish (Rhinecanthus annulatus) in sandy habitats. Overall, the underlying patterns in fish diversity recorded with the two video methods were generally comparable. However, stereo-RUVs appeared to be unable to detect species that were present in sand habitats, while stereo-BRUVs increased the number and abundance of species recorded in all habitat types. In the stereo-RUVs footage, differences between reef habitats were dampened by the presence of highly abundant fish species. In the stereo-BRUVs footage, although bait appeared to have an effect on the observed fish assemblage, this manifested in an increase in species richness, higher fish abundances and a better overall ability to detect fish–habitat relationships. As such, stereo-BRUVs are considered a robust, effective and recommended method for detecting fish–habitat relationships, even over a fine scale.
- Full Text:
- Date Issued: 2019
The integration of effluent treatment using constructed wetlands, with crop production and aquaculture
- Authors: de Jong, Martyn
- Date: 2019
- Subjects: Recycling (Waste, etc.) , Brewery waste , Sewage -- Purification , Beets , Mozambique tilapia
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/95767 , vital:31197
- Description: Breweries are major consumers of water and produce nutrient rich wastewater. Therefore, it is important to research technologies that optimise the reuse and recycling of this waste. This study compared different constructed wetlands (CWs) in terms of their potential for cleaning brewery effluent and simultaneously producing crops Beta vulgaris and fish Oreochromis mossambicus. Filling and draining times (FDT; 15 min, 30 min and 60 min) in tidal CWs were compared in Experiment 1. The 15 min FDT (6.52 ± 0.09 mg/l) and 30 min FDT (5.74 ± 0.09 mg/l) had higher dissolved oxygen (DO) than the 60 min FDT (5.40 ± 0.09 mg/l; p<0.05). This resulted in the 15 and 30 min FDT treatments reaching ammonia effluent discharge standards sooner than the 60 min FDT. Total plant harvest increased with increasing FDT; therefore, 15 min FDT was used as the FDT in tidal treatments in the following experiments. The aerated CW (5.81 ± 0.07 mg/l) and tidal CW (5.67 ± 0.07 mg/l) treatments had higher DO concentrations than the unaerated CW treatment (3.76 ± 0.07 mg/l; p<0.05) in Experiment 2. This resulted in lower ammonia concentrations on day 5 in the aerated and tidal CWs compared with the unaerated treatment (p<0.05). The tidal CW (23.97 ± 2.57 kg) had a total harvest that was approximately four times higher than the unaerated CW (p<0.05), which had the highest frequency of chlorosis and plant mortality; and was unable to treat ammonia to discharge standards. In Experiment 3, the aerated and tidal CW were compared with municipal-water as water sources for aquaculture. There were no differences in fish growth (p > 0.05). However, there were differences in water quality; with the municipal treatment having the lowest pH, EC and nitrate concentration (p<0.05); but all water quality parameters remained in a range suitably for fish production. Due to the tidal CW having the highest plant harvest and lowest frequency of chlorosis and mortality; it was the most suitable CW technology to clean the brewery effluent, and to produce B. vulgaris and water that could be used downstream in aquaculture.
- Full Text:
- Date Issued: 2019
The morphological and molecular variation of southern African Nannocharax (Characiformes: Distichodontidae), and its taxonomic implications
- Authors: Smith, Timothy
- Date: 2019
- Subjects: Nannocharax -- Africa, Southern , Distichodontidae -- Africa, Southern , Freshwater fishes -- Africa, Southern , Nannocharax -- Genetics -- Africa, Southern , Distichodontidae -- Genetics -- Africa, Southern , Freshwater fishes -- Genetics -- Africa, Southern
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/69212 , vital:29446
- Description: Nannocharax is the most species rich genus in the family Distichodontidae, being currently represented by 41 species. The genus is widely distributed across much of sub-Saharan Africa, with a range extending from the Zambezi ichthyofaunal province in the south to the Nilo-Sudan ichthyofaunal province in the north. In southern Africa, the genus is currently represented by four species, Nannocharax dageti Jerep, Vari, & Vreven, 2014, N. machadoi (Poll, 1967), N. macropterus Pellegrin, 1926, and N. multifasciatus Boulenger, 1923. Each of these species exhibit considerable intraspecific pigmentation pattern variation across their respective distribution ranges, suggesting that the current taxonomy possibly underestimates the taxonomic diversity of Nannocharax species in southern Africa. Much pigmentation pattern variation within these southern African species has been observed by both collectors and scientists in the field, prompting an investigation into the extent of this morphological variation as well as what molecular variation may occur as well. The genus displays a high degree of morphological conservatisim, making it difficult to assign external morphological characters as diagnostic. To this end, this study was conducted to determine the extent of diversity of this genus in the region, employing an integrative approach with traditional morphological analysis techniques as well as sequencing the ‘barcoding gene’, cytochrome oxidase I, testing the hypothesis that there is a greater, hidden diversity of this genus in the region than currently recognised. This study aims to identify these potential lineages and accurately map their distributions. Phylogenetic analyses were performed using maximum parsimony, maximum likelihood, and Bayesian inference, using the mitochondrial cytochrome oxidase I gene region. Massive genetic divergence was detected between populations of taxa previously considered to be singular, widely distributed species. The three approaches of phylogenetic inference used in this study yielded trees of comparable overall topology, with the exception of the maximum parsimony tree which indicated additional lineages within the southern African N. multifasciatus group. These analyses revealed four deeply divergent (1.3 – 12.3%) lineages within southern African N. macropterus, as well as two deeply divergent (0.4-14.6%) populations from the Congo ichthyofaunal region, the lineages here named “N. macropterus Congo 1” and “N. macropterus Congo 2”. Within the southern African region, two deeply divergent (10.3%) lineages of N. macropterus were identified from the Okavango River system, identified as “N. macropterus Okavango 2” lineage restricted to the Cuito-Canavale tributary, and “N. macropterus Okavango 1” distributed throughout the remainder of the Okavango system. “N. macropterus Okavango 2” shares a closer relationship with the unique lineage from the Kwanza ichthyofaunal region, named N. macropterus “Kwanza”, which itself is deeply divergent from the N. macropterus “Okavango 1”, N. macropterus “Zambezi”, N. macropterus “Congo 1” and N. macropterus “Congo 2” lineages (3.1-14.4%). Principal component analyses (PCA) and discriminant function analyses (DFA) produced overlapping clusters for all identified lineages, with the exception of the N. macropterus “Kwanza” lineage, which in all analyses clustered away from the other lineages. Analysis of variance (ANOVA) and Kruskall-Wallis tests indicated significant differences in means between character traits between lineages, however, overlap in measurements and counts occurred in all instances except between the N. macropterus “Kwanza” and N. macropterus Congo lineages. However the N. macropterus “Kwanza” lineages could be distinguished from the other lineages by generally smaller fin lengths (dorsal fin 19.5%SL vs 20.0-22.1%SL in others; pectoral fin 16.5%SL vs 20.6-21.8%SL in others; pelvic fin 18.3%SL vs 21.3-22.4) and pigmentation pattern differences. The N. macropterus species group displayed extensive pigmentation pattern variation, to the extent that five pattern grades could be used to classify them. These pattern grades, while not specific to river systems, showed patterns similar to that which was seen in the molecular analyses and could be linked to lineages with only minor overlap between them. Three lineages of N. multifasciatus were identified, with two occurring in the southern African region, each corresponding to a river system, being the N. multifasciatus “Zambezi” and N. multifasciatus “Okavango” lineages. This species group displayed shallower divergence between lineages than did the N. macropterus group, at 2.5% genetic distance. Genetic analysis inferred a closer relationship between the N. multifasciatus “Zambezi” and N. multifasciatus “Congo” lineages than with the N. multifasciatus “Okavango” lineage. Morphological PCA and DFA analyses indicated morphological divergence of the N. multifasciatus “Congo” lineage, with generally larger proportional measurements than southern African specimens (body width 12.6%SL vs 9.5-9.7%SL; body depth 26.6%SL vs 21.6-21.9%SL; head width 12.0%SL vs 10.0-10.4%SL). PCA, DFA, and measurements show a near complete overlap between the N. multifasciatus “Okavango” and N. multifasciatus “Zambezi” lineages. Pigmentation pattern variation occurred within this group, but none that could be assigned to a particular lineage. The N. machadoi species group in southern Africa consists of five lineages: N. machadoi “Zambezi 1”, N. machadoi “Zambezi 2”, N. machadoi “Kafue 1”, N. machadoi “Kafue 2”, and N. machadoi “Okavango”. This group displayed shallower genetic divergence between lineages than the other southern African Nannocharax species groups (0.4-1.3%). This shallow genetic divergence is paralleled by near complete morphological overlap, with PCA and DFA producing overlapping clusters, and measurements, meristics, and pigmentation pattern metrics consisting of very similar values for the lineages. These results indicate that what is considered to be “N. macropterus” in southern Africa should not be named as such. The N. macropterus “Zambezi” and the N. macropterus “Okavango 1” lineages, are misidentifications of Nannocharax dageti. Other “N. macropterus” from the southern African region possesses fewer circumpeduncular scales than the true N. macropterus as described by Pellegrin (1926), and require taxonomic re-evaluation, each here being recognised as a unique lineage with species status, here named N. macropterus “Okavango 2” and N. macropterus “Kwanza”. In particular, N. macropterus “Kwanza” displays deep genetic divergence as well as morphological dissimilarity with the other southern African “N. macropterus” groups. Nannocharax fasciolaris and N. monardi are here placed as junior synonyms of N. multifasciatus, owing to vast overlaps in measurements and character counts of these species and N. multifasciatus, which is also known to occur within the same geographical distribution, as well as dubious arguments from the original publications in delineating these species from N. multifasciatus. Therefore, there is insufficient evidence indicating the presence of multiple species originating from the Okavango system, where it is here indicated that only a single lineage of banded, adipose fin-bearing Nannocharax occurs, namely N. multifasciatus “Okavango”.
- Full Text:
- Date Issued: 2019
The trophic and spatial ecology of a sympatric dasyatid community at a remote Atoll, Seychelles
- Authors: Elston, Chantel
- Date: 2019
- Subjects: Dasyatidae -- Seychelles -- Ecology , Rays (Fishes) -- Seychelles -- Ecology , Ecology -- Seychelles , Dasyatidae -- Seychelles -- Conservation , Pastinachus sephen , Urogymnus granulatus , Urogymnus asperrimus
- Language: English
- Type: text , Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10962/95756 , vital:31196 , DOI https://doi.org/10.21504/10962/95756
- Description: Batoid populations are declining globally but the paucity of information makes management or conservation efforts difficult. Additionally, batoids are mesopredators and are hypothesised to play important ecological roles, but a comprehensive understanding of these roles is also limited. Therefore, information on batoid habitat use, foraging ecology, and resource partitioning is needed. St. Joseph Atoll is a relatively pristine ecosystem that hosts a sympatric dasyatid community (Pastinachus sephen, Urogymnus granulatus, and U. asperrimus). Passive acoustic telemetry identified high levels of long-term site affinity by both juvenile and adult dasyatids to St. Joseph Atoll. Dispersal from the atoll by larger juveniles was also evident. Juveniles displayed restricted horizontal movements in the atoll, but the extent of these movements differed seasonally. Stomach content and stable isotope analyses identified inter-specific prey partitioning (P. sephen juveniles were mollusc specialists and U. granulatus juveniles were crustacean specialists) and intra-specific prey partitioning. Juveniles were reliant upon a seagrass-based food web, whereas adults were reliant on phytoplankton-based food web. Adults fed at higher trophic levels compared to juveniles (mean of 4.6 and 3.4 respectively). Juvenile dasyatids preferentially selected the shallow reef at habitat of the atoll, where there was no evidence for inter-specific habitat partitioning (individuals co-occurred randomly with con-and hetero-specifics). Conversely, resident adults were more reliant on the deeper lagoon. Juveniles selected the reef at habitat likely because it provided refuge from predation and foraging opportunities. However, juveniles were also detected in the lagoon habitat and this appeared to be necessitated by physical factors as they were detected more frequently in the lagoon at low tides and when temperatures on the reef fats became too warm or too cold. All results together suggest that St. Joseph Atoll is a nursery area for these dasyatids. Juveniles may be limited by resources as prey was partitioned between species. However, top-down control by larger sharks was likely a significant influence on habitat selection, as was the physical effects of tide and temperature. Finally, St. Joseph Atoll is suitable for the designation of a Marine Protected Area, which would likely confer high conservation benefits to this dasyatid community.
- Full Text:
- Date Issued: 2019
The use of filter-feeding fish (Clarias gariepinus and Oreochromis mossambicus) to remove microalgae from brewery effluent treatment ponds
- Authors: Nombembe, Lwazi
- Date: 2019
- Subjects: Clarias gariepinus -- Food , Mozambique tilapia -- Food , Water -- Purification -- South Africa , Algae -- Biotechnology -- South Africa , Microalgae -- Biotechnology-- South Africa , Brewery waste -- South Africa , Fish culture -- South Africa
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/95745 , vital:31194
- Description: The removal of microalgae from high rate algal ponds (HRAP) in waste-water treatment systems remains a constraint to their use in effluent treatment systems. Conventional algae harvesting methods often have high energy demands, take up lots of space, are expensive to operate or are time consuming. The aim of the study was to determine if fish such as Clarias gariepinus and Oreochromis mossambicus, could be used to remove microalgae from waste-water treatment ponds (in the absence/presence of a flocculent in the former and in the absence or presence of pH moderation in the latter), and to investigate the subsequent influence of algae concentration on several water quality parameters. The age of Clarias gariepinus (3-12 months) had a positive relationship with the distance between gill rakers (98.27 to 163.34 μm; y=90.576+4.823*x: R²=0.549; F(1,18)=21.867; p<0.001) and these data suggested that these fish might be efficient at removing algae from HRAP effluent. However, this was not the case, even with flocculent application (but this result might have been confounded by very high pH readings, at which flocculation is less likely to occur). Oreochromis mossambicus removed some of this algae, but the pH was too high for tilapia culture. It was not possible to moderate the increase in pH by keeping tanks in the dark and thus preventing photosynthesis; but pH fluctuation in HRAP effluent could be moderated using CO2 sparging in an attempt to make the environment more hospitable for tilapia (the average pH that was moderated with CO2 was 8.43±0.06, whereas the unmoderated average was 10.65±0.06). However, pH moderation using CO2 sparging did not increase the rate at which algae were removed by O. mossambicus; rather, it compromised O2 concentration which dropped to 4.17±1.26 mg/l after five hours of CO2 sparging, whereas it increased to 20.50±1.41 mg/l in treatments with unadjusted pH over the same period. Fish can be used to remove algae from treated effluent, and Oreochromis mossambicus remains a recommended species. Future work needs to investigate moderating fluctuations in pH and O2 concentration to further facilitate this method of algae removal.
- Full Text:
- Date Issued: 2019
Towards a norm of compliance in recreational fisheries
- Authors: Bova, Christopher S
- Date: 2019
- Subjects: Fishing -- Management -- South Africa , Fishery law and legislation -- South Africa
- Language: English
- Type: text , Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10962/95909 , vital:31213
- Description: The activity of fishing can be traced back to prehistoric times. However, only in the last century has there been a focus on the management of fisheries. Fishery regulations are tools used by resource managers with the aim of protecting the long-term sustainability of fishery resources. Although there is an overwhelming amount of evidence demonstrating the decline of fisheries, non-compliance with these regulations by fishers continues to manifest, which can exacerbate the negative ecological impacts of fisheries. Popular methods towards the measurement of noncompliance in fisheries derived from previous human dimensions literature may be flawed. Theories on improving compliance behaviour have typically relied on theory, which has at times proved paradoxical. Addressing the issues of non-compliance within a fishery of interest requires measuring the levels of non-compliance within the fishery and determining the relevant sociopsychological drivers behind the non-compliant behaviour. The data collection methods used during these assessments are limited in human dimensions research and are often case and context specific, requiring researchers to identify which approach is most practical for the specific fishery of interest. By identifying relevant behavioural drivers of non-compliance, a more effective approach aimed at improving compliance can be tailored. The recreational marine-based shore fishery (MBSF) in South Africa is not impervious to noncomplaint behaviour. In fact, it has been estimated to have relatively high rates of non-compliance. This high level of non-compliance makes the South African MBSF a unique and optimal context in which to undertake research that aims to formulate a framework towards compliance assessments and that develops a suitable approach for improving compliance rates. Using surveys to obtain compliance data can provide a range of details about violators, however they are susceptible to social desirability bias (SDB). Choosing the best method for controlling SDB required an assessment of existing methods for doing so. In this first part of the study, only fishers who were covertly observed breaking the rules were surveyed, using one of three methods for reducing SDB, to ground-truth the responses. Ground-truthing was done to determine which method would be most effective for a large-scale study within the same fishery. Of the methods used, which include the direct questioning method (DQM), the random response technique (RRT) and the ballot box method (BBM), all contained some level of SDB. However, the BBM provided a significantly higher level of response accuracy (79.6% ± 11.9) than the DQM (46.5% ± 14.9) and the RRT (44.3% ± 12.5). Random-stratified roving creel compliance surveys that employed the BBM were then undertaken at various locations along South Africa’s coastline to estimate current rates of non-compliance, and the face-to-face results were compared to results from an identical online survey to determine the suitability of online surveys as a replacement. The results indicated that online surveys only represent a subgroup of the fisher population within the MBSF, suggesting that face-to-face survey methods are required to obtain a more comprehensive sample and a more robust estimate of noncompliance. The results, based on 453 face-to-face surveys, showed a high level of overall self-reported noncompliance (48.3%) within the fishery. Responses to Likert scale survey questions on various aspects of the fishery, including angler motivations for fishing, were then modelled to test the relationship between the anglers’ responses and their compliance behaviour. In the South African MBSF context, the most significant behavioural drivers behind non-compliance related to normative concepts. Specifically, the poor perceptions of management and value-based legitimacy as well as low levels of moral obligation to adhere to the regulations appeared to contribute most to the observed non-compliant behaviour. Angler motivations for fishing also played a significant role in determining the compliance behaviour of anglers, with those fishing for food being more likely to violate regulations. In most countries, regardless of economic context, interventions to improve recreational fishery compliance have been developed around the instrumental concept. However, these findings suggest that for recreational fisheries, managers would do well to evaluate the impact of normative concepts on compliance and to design interventions aimed at addressing these. In the case of the South African MBSF, interventions that address angler perceptions of legitimacy and aim to correct misperceptions about social norms of compliance may provide a more practical and cost- effective method for improving poor compliance behaviour.
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- Date Issued: 2019
Towards defining the tipping point of tolerance to CO2-induced ocean acidification for the growth, development and metabolism of larval dusky kob Argyrosomus japonicus (Pisces: Sciaenidae)
- Authors: Mpopetsi, Pule Peter
- Date: 2019
- Subjects: Argyrosomus japonicus , Argyrosomus , Argyrosomus japonicus -- Larvae , Argyrosomus -- Larvae -- Effect of water acidification on , Argyrosomus japonicus -- Larvae -- Nutrition , Argyrosomus -- Larvae -- Nutrition , Ocean acidification
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/71602 , vital:29924
- Description: Increased CO2 production and the consequent ocean acidification (OA) have been identified as one of the greatest threats to both calcifying and non-calcifying marine organisms. Traditionally, marine fishes, as non-calcifying organisms, were considered to have a higher tolerance to near-future OA conditions owing to their well-developed ion regulatory mechanisms. However, recent studies provide evidence to suggest that they may not be as resilient to near-future OA conditions as previously thought. In addition, earlier life stages of marine fishes are thought to be less tolerant than juveniles and adults of the same species as they lack well-developed ion regulatory mechanisms for maintaining homeostasis. This study follows up on previous studies examining the effects of near-future OA on larval Argyrosomus japonicus, an estuarine-dependent marine fish species, in order to identify the tipping point of tolerance for the larvae of this species. These previous studies showed that elevated pCO2, predicted for the year 2100, had negative effects on growth, development and metabolism and ultimately, survival of larval A. japonicus from post-flexion stage. Larval A. japonicus in the present study were reared from egg up to 22 DAH (days after hatching) under three treatments. The three treatments, (pCO2 353 μatm; pH 8.03), (pCO2 451 μatm; pH 7.93) and (pCO2 602 μatm; pH 7.83) corresponded to levels predicted to occur in year 2050, 2068 and 2090 respectively under the Intergovernmental Panel on Climate Change (IPCC) Representative Concentration Pathways (IPCC RCP) 8.5 model. Size-at-hatch, growth, development and metabolic responses (standard and active metabolic rates and metabolic scope) were assessed and compared between the three treatments throughout the rearing period. Five earlier larval life stages (hatchling – flexion/post-flexion) were identified by the end of the experiment. There were no significant differences in size-at-hatch (P > 0.05), development or the active metabolic (P > 0.05) or metabolic scope (P > 0.05) of fish in the three treatments throughout the study. However, the standard metabolic rate was significantly higher in the year 2068 treatment but only at the flexion/post-flexion stage which could be attributed to differences in developmental rates (including the development of the gills) between the 2068 and the other two treatments. Overall, the metabolic scope was narrowest in the 2090 treatment, but varied according to life stage. Although not significantly different, metabolic scope in the 2090 treatment was noticeably lower at the flexion stage compared to the other two treatments, and the development appeared slower, suggesting that this could be the stage most prone to OA. The study concluded that, in isolation, OA levels predicted to occur between 2050 and 2090 will not negatively affect size-at-hatch, growth, development, and metabolic responses of larval A. japonicus up to 22 DAH (flexion/post-flexion stage). Taken together with the previous studies of the same species, the tipping point of tolerance (where negative impacts will begin) in larvae of the species appears to be between the years 2090 and 2100.
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- Date Issued: 2019
Using a multi-method approach to understand the movement patterns and the associated environmental correlates of an iconic West African recreational fish
- Authors: Winkler, Alexander Claus
- Date: 2019
- Subjects: Carangidae fishing , Carangidae -- Migration , Carangidae -- Namibia , Carangidae -- Angola , Fish tagging , Carangidae -- Benguela Current , Underwater acoustic telemetry , Ocean temperature -- Physiological effect , Fishes -- Effect of temperature on
- Language: English
- Type: text , Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10962/76530 , vital:30597
- Description: The leerfish (Lichia amia), is a large, primarily coastal recreational fish species with a distribution extending from Portugal down the west coast of African to southern Mozambique. Owing to its large size (30 kg), strong fighting abilities and habit of taking surface artificial lures, this species has taken on an iconic stature among shore-based recreational anglers. Its reputation has made it an important angling tourism species that makes an important contribution to the economy of developing countries. For example, the species brought US$243 per harvested kilogramme into the local southern Angola economy. Despite its high value, little is known about its movement patterns in the northern Benguela coastal region, a region which includes southern Angola and northern Namibia. While much is known about the migratory patterns of the South African stock of L. amia, recent molecular studies have shown that the northern Benguela stock of L. amia has been isolated from the South African population for at least two million years, a consequence of the development of the cold Lüderitz upwelling cell in southern Namibia. Although the global population of L. amia is considered a single species, prominent biogeographic barriers within its distribution and subtle morphological differences between specimens captured within its tropical versus warm-temperate distribution suggest otherwise. A multi-method approach incorporating passive acoustic telemetry (PAT), recreational catch-per-unit-effort (CPUE) and conventional tagging (CT) in southern Angola, as well as recreational fisher-ecological knowledge (FEK) from Namibia, was used to investigate the large-scale movement patterns of L. amia within the northern Benguela coastal region. While each method had its own associated limitations, the combination provided a holistic picture of the population's seasonal migratory patterns. Furthermore, PAT successfully identified partial migration with 25% vs 75% of monitored fish exhibiting resident (movements < 100 km) or migratory (movements > 100 km) behaviour, respectively. Further behavioural diversity was observed with ‘resident’, ‘roaming’ and ‘embayment’ contingents identified based on varying levels of affinity to certain habitats. The presence of both resident and migratory individuals within the northernmost study during June and July, combined with available biological information, suggested that area-specific spawning may take place. While PAT, CPUE and CT largely aligned in determining area specific high-area use, results from network analyses and mixed effects models conducted on the PAT data supported the spawning hypothesis, with anomalous behaviour around specific receivers during the spawning season. All fish, regardless of behavioural contingent, displayed similar movement behaviour during the spawning season and this was driven by factors generally associated with reproduction, such as lunar illumination. Interestingly, these drivers were different from those that determined the area specific use of individuals outside of the spawning season. The environmental drivers of longshore migration into the northern study site were identified as a decline in water temperature and shorter day lengths. The results of this study highlight the importance of using a multi-method approach in determining migratory movement behaviour, area specific area use, and stock structure of key fisheries species. The identification of different behavioural contingents highlights the importance of acknowledging individual variation in movement and habitat-use patterns. This is particularly relevant as future climate change and spatiotemporal variation in fishing effort may artificially skew natural selection processes to favour certain behavioural groups. This study also highlighted the importance of scientists forming relationships with resource-users, such as recreational angling lodges in areas where limited research has been conducted. This is particularly relevant within the West African context where little is known about many of the fish species that are being increasingly targeted by tourism angling ventures.
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- Date Issued: 2019