Investigating long-term host-parasite dynamics in odontocetes in Southern Africa
- Authors: Adams, Inge Alison
- Date: 2018
- Subjects: Biological invasions -- Environmental aspects , Cetacea -- Indian Ocean , Ecological disturbances
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/23437 , vital:30543
- Description: Cetaceans are a very diverse family and globally, various aspects about their biology have been studied, including infection by parasites. Twenty-five dolphin species can be found in the South African subregion and very little information is available detailing which parasites are infecting them. Parasite samples have been collected opportunistically since the 1970’s from dolphins incidentally caught in shark nets off the KwaZulu-Natal coastline as well as from dolphins stranded along the Eastern Cape coastline. These samples have been stored in the Graham Ross Marine Mammal Collection at the Port Elizabeth Museum and samples belonging to eight odontocete species have been used in the present analysis. These eight species are: the Indian Ocean Humpback Dolphin (Sousa plumbea), the Indo-Pacific Bottlenose Dolphin (Tursiops aduncus), the Long-beaked Common Dolphin (Delphinus capensis), the Risso’s Dolphin (Grampus griseus), the Pantropical Spotted Dolphin (Stenella attenuata), the Striped Dolphin (Stenella coeruleoalba), the Pygmy Sperm Whale (Kogia breviceps) and the Dwarf Sperm Whale (Kogia breviceps). This study aims to investigate which parasites are infecting odontocetes in Southern Africa. Secondly, this study aims to investigate whether any trends in infection exist between sexes, age groups, cause of death and over time. Eighteen parasite species were found to infect odontocetes in Southern Africa. Two could only be identified to family level, seven to genus level and eight to species level. Only one parasite, a trematode, could not be identified and several parasite species were new host records for the subregion. Results showed that the prevalence of parasitic infection has increased over the last four decades, prompting questions regarding the health of our oceans. This study is the first to comprehensively investigate which parasite species are found in these eight odontocete species in Southern Africa. This baseline data will contribute greatly to other types of research involving parasites and provides us with information regarding the health of our ocean.
- Full Text:
- Date Issued: 2018
- Authors: Adams, Inge Alison
- Date: 2018
- Subjects: Biological invasions -- Environmental aspects , Cetacea -- Indian Ocean , Ecological disturbances
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/23437 , vital:30543
- Description: Cetaceans are a very diverse family and globally, various aspects about their biology have been studied, including infection by parasites. Twenty-five dolphin species can be found in the South African subregion and very little information is available detailing which parasites are infecting them. Parasite samples have been collected opportunistically since the 1970’s from dolphins incidentally caught in shark nets off the KwaZulu-Natal coastline as well as from dolphins stranded along the Eastern Cape coastline. These samples have been stored in the Graham Ross Marine Mammal Collection at the Port Elizabeth Museum and samples belonging to eight odontocete species have been used in the present analysis. These eight species are: the Indian Ocean Humpback Dolphin (Sousa plumbea), the Indo-Pacific Bottlenose Dolphin (Tursiops aduncus), the Long-beaked Common Dolphin (Delphinus capensis), the Risso’s Dolphin (Grampus griseus), the Pantropical Spotted Dolphin (Stenella attenuata), the Striped Dolphin (Stenella coeruleoalba), the Pygmy Sperm Whale (Kogia breviceps) and the Dwarf Sperm Whale (Kogia breviceps). This study aims to investigate which parasites are infecting odontocetes in Southern Africa. Secondly, this study aims to investigate whether any trends in infection exist between sexes, age groups, cause of death and over time. Eighteen parasite species were found to infect odontocetes in Southern Africa. Two could only be identified to family level, seven to genus level and eight to species level. Only one parasite, a trematode, could not be identified and several parasite species were new host records for the subregion. Results showed that the prevalence of parasitic infection has increased over the last four decades, prompting questions regarding the health of our oceans. This study is the first to comprehensively investigate which parasite species are found in these eight odontocete species in Southern Africa. This baseline data will contribute greatly to other types of research involving parasites and provides us with information regarding the health of our ocean.
- Full Text:
- Date Issued: 2018
Potential use of carbon nanotubes as a nanofiller for natural rubber latex condoms
- Authors: Agbakoba, Victor Chike
- Date: 2018
- Subjects: Nanotubes , Rubber chemistry Nanocomposites (Materials) Nanostructured materials
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/23393 , vital:30538
- Description: The recent advancement in the field of nano-technology has raised much interest in the area of natural rubber latex (NRL) processing. This interest stems from the exceptional properties of nano-material and the promising results obtained by several researchers. Studies have shown that very low loadings of inorganic nanomaterials such as carbon nanotube (CNT) in NRL matrix leads to enhanced tensile strength, tensile modulus, tear resistance and aberration resistance. Thus providing a great prospect for reinforcement of thin film NRL articles such as condom. In this research, prevulcanised natural rubber latex (PvNRL) composite blends containing single walled carbon nanotubes (SWCNTs) were prepared via direct mixing. A progressive discolouration of PvNRL was observed with increased loadings of CNTs. Thermal analysis revealed faster drying rates for the composite blends containing SWCNT. Results from equilibrium swelling experiments also suggested a slight increase in crosslink density in the presence of SWCNT. There was a significant influence on flow behaviour of PvNRL as a result of varying loadings of SWCNT suspension. This was reflected as a change in pseudoplasticity and apparent viscosity. For Instance, apparent viscosity at a shear rate of 1 s-1 at 25°C for PvNRL with ~0.08% SWCNT was 2.5 Pa.s, compared to 0.49 Pa.s for the blends with 0.02% SWCNT. Condoms were moulded via the straight dipping technique using custom made glass formers. A series of dilutions was performed to correct the viscosity differences. This also ensured good consistency and promoted uniform deposition of PvNRL on the glass former. The average dimensions of the condoms produced in terms of length and width were ~191.17 ± 5.17 mm and 52.67 ± 5.17 mm respectively. Thickness measurement varied slightly according to the method of determination. The water leakage test suggested the absence of holes in the condoms produced. However, results from electrical leakage test contradicted those from water leak test. The results from infrared spectroscopy (FTIR) did not confirm the presence of chemical interactions between the SWCNT and PvNRL matrix. Glass transition temperature (Tg) was also unaffected across the blends. The stiffness (or modulus) was unaffected in all the condoms, as revealed by results from indentation hardness analysis. The SWCNT showed no significant influence on thermal decomposition temperatures of the condoms. Nonetheless, images from optical microscopy revealed increased surface roughness corresponding to higher loadings of SWCNT. Results from stress relaxation studies revealed improved retention of modulus under constant strain for condom samples containing SWCNT.
- Full Text:
- Date Issued: 2018
- Authors: Agbakoba, Victor Chike
- Date: 2018
- Subjects: Nanotubes , Rubber chemistry Nanocomposites (Materials) Nanostructured materials
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/23393 , vital:30538
- Description: The recent advancement in the field of nano-technology has raised much interest in the area of natural rubber latex (NRL) processing. This interest stems from the exceptional properties of nano-material and the promising results obtained by several researchers. Studies have shown that very low loadings of inorganic nanomaterials such as carbon nanotube (CNT) in NRL matrix leads to enhanced tensile strength, tensile modulus, tear resistance and aberration resistance. Thus providing a great prospect for reinforcement of thin film NRL articles such as condom. In this research, prevulcanised natural rubber latex (PvNRL) composite blends containing single walled carbon nanotubes (SWCNTs) were prepared via direct mixing. A progressive discolouration of PvNRL was observed with increased loadings of CNTs. Thermal analysis revealed faster drying rates for the composite blends containing SWCNT. Results from equilibrium swelling experiments also suggested a slight increase in crosslink density in the presence of SWCNT. There was a significant influence on flow behaviour of PvNRL as a result of varying loadings of SWCNT suspension. This was reflected as a change in pseudoplasticity and apparent viscosity. For Instance, apparent viscosity at a shear rate of 1 s-1 at 25°C for PvNRL with ~0.08% SWCNT was 2.5 Pa.s, compared to 0.49 Pa.s for the blends with 0.02% SWCNT. Condoms were moulded via the straight dipping technique using custom made glass formers. A series of dilutions was performed to correct the viscosity differences. This also ensured good consistency and promoted uniform deposition of PvNRL on the glass former. The average dimensions of the condoms produced in terms of length and width were ~191.17 ± 5.17 mm and 52.67 ± 5.17 mm respectively. Thickness measurement varied slightly according to the method of determination. The water leakage test suggested the absence of holes in the condoms produced. However, results from electrical leakage test contradicted those from water leak test. The results from infrared spectroscopy (FTIR) did not confirm the presence of chemical interactions between the SWCNT and PvNRL matrix. Glass transition temperature (Tg) was also unaffected across the blends. The stiffness (or modulus) was unaffected in all the condoms, as revealed by results from indentation hardness analysis. The SWCNT showed no significant influence on thermal decomposition temperatures of the condoms. Nonetheless, images from optical microscopy revealed increased surface roughness corresponding to higher loadings of SWCNT. Results from stress relaxation studies revealed improved retention of modulus under constant strain for condom samples containing SWCNT.
- Full Text:
- Date Issued: 2018
Citizen science, treatment and microbial compliance monitoring in rainwater harvesting in Namibia
- Angala, Hallo Angaleni Nameya
- Authors: Angala, Hallo Angaleni Nameya
- Date: 2018
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/62082 , vital:28105
- Description: Expected release date-April 2020
- Full Text:
- Date Issued: 2018
- Authors: Angala, Hallo Angaleni Nameya
- Date: 2018
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/62082 , vital:28105
- Description: Expected release date-April 2020
- Full Text:
- Date Issued: 2018
Incidence of bacterial infections and colonisation in patients admitted to a tuberculosis hospital
- Authors: Annear, Dale John
- Date: 2018
- Subjects: Medical microbiology , Microbiology Bacteriology Tuberculosis -- Hospitals -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/21482 , vital:29526
- Description: Patients with drug resistant tuberculosis (TB) are treated with multiple antibiotics including moxifloxacin, linezolid, and meropenem, which puts them at greater risk for colonisation by multi-drug resistant (MDR) bacteria. The objectives of this study were to: (i) assess the antimicrobial prescribing patterns practiced within the hospital by retrospective patient file review; (ii) determine the spectrum of bacterial colonisation in TB patients upon admission and during hospitalisation; (iii) identify bacterial isolates and evaluate antimicrobial susceptibility profiles; (iv) detect antimicrobial resistance genes in the bacterial isolates by PCR and DNA sequencing; and (v) investigate genetic relatedness of Klebsiella pneumoniae isolates using Multi Locus Sequence Typing. Nasal, groin and rectal swabs [for the detection of extended spectrum beta lactamases (EBSLs), carbapenem-resistant Enterobacteriaceae (CRE), vancomycin-resistant enterococci (VRE) and methicillin-resistant Staphylococcus aureus (MRSA)] were analysed from a cohort of patients (n=37) admitted either from the community (n = 28) or from other healthcare facilities (n=9) to a TB hospital. Swab samples were collected at admission and at four week intervals thereafter during hospitalization. Identification and antimicrobial susceptibility testing of bacterial isolates (n=62) were determined at the National Health Laboratory Services (NHLS) by the VITEK-MS and Vitek 2 systems respectively. Additional antimicrobial susceptibility testing was conducted by Sensititre Gram Negative Xtra (GNFX2) MIC plates. PCR and DNA sequencing were used for detection of resistance genes. Patients (n=13/37; 35%) were colonized by MDR bacteria (ESBLs [n=11], MRSA [n=2]) on admission. Colonization rates were lower in patients admitted from the community (9/28; 32%) compared to those transferred from other healthcare facilities (4/9; 44%). All admitted patients who did not exhibit colonization at baseline and who were resident within the hospital for longer than 4 weeks (17/37; 46% of total patients) became colonised by an ESBL-producing Enterobacteriaceae species. No patients acquired MRSA during hospitalisation. Among ESBL Enterobacteriaceae, Escherichia coli (41/62; 66%) and K. pneumoniae [14/62; 23%]) predominated. Nineteen percent (7/37) of patients demised during their hospitalization. Both the Vitek system and Sensititre Gram Negative Xtra (GNFX2) MIC plates susceptibilities were similar for most antimicrobials, however there were discrepancies for tigecycline susceptibility profiles. A high number of isolates exhibited resistance to aminoglycosides and fluoroquinolones. Genes encoding for ESBLs (CTX-M-14, CTX-M-15, SHV-28, OXA-1, and OXY-2-9) were detected among ESBL Enterobacteriaceae. Two Enterobacteriaceae isolates with reduced carbapenem susceptibility did not contain carbapenemase-encoding genes. MLST revealed unique sequence types and genetic diversity among the K. pneumoniae isolates from hospitalised patients. However, the source and colonization routes of these isolates could not be determined, which requires further investigation. This study provides insight into the spectrum of bacterial pathogen colonisation in hospitalised TB patients and suggests a review of infection control programs and practices at the TB hospital.
- Full Text:
- Date Issued: 2018
- Authors: Annear, Dale John
- Date: 2018
- Subjects: Medical microbiology , Microbiology Bacteriology Tuberculosis -- Hospitals -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/21482 , vital:29526
- Description: Patients with drug resistant tuberculosis (TB) are treated with multiple antibiotics including moxifloxacin, linezolid, and meropenem, which puts them at greater risk for colonisation by multi-drug resistant (MDR) bacteria. The objectives of this study were to: (i) assess the antimicrobial prescribing patterns practiced within the hospital by retrospective patient file review; (ii) determine the spectrum of bacterial colonisation in TB patients upon admission and during hospitalisation; (iii) identify bacterial isolates and evaluate antimicrobial susceptibility profiles; (iv) detect antimicrobial resistance genes in the bacterial isolates by PCR and DNA sequencing; and (v) investigate genetic relatedness of Klebsiella pneumoniae isolates using Multi Locus Sequence Typing. Nasal, groin and rectal swabs [for the detection of extended spectrum beta lactamases (EBSLs), carbapenem-resistant Enterobacteriaceae (CRE), vancomycin-resistant enterococci (VRE) and methicillin-resistant Staphylococcus aureus (MRSA)] were analysed from a cohort of patients (n=37) admitted either from the community (n = 28) or from other healthcare facilities (n=9) to a TB hospital. Swab samples were collected at admission and at four week intervals thereafter during hospitalization. Identification and antimicrobial susceptibility testing of bacterial isolates (n=62) were determined at the National Health Laboratory Services (NHLS) by the VITEK-MS and Vitek 2 systems respectively. Additional antimicrobial susceptibility testing was conducted by Sensititre Gram Negative Xtra (GNFX2) MIC plates. PCR and DNA sequencing were used for detection of resistance genes. Patients (n=13/37; 35%) were colonized by MDR bacteria (ESBLs [n=11], MRSA [n=2]) on admission. Colonization rates were lower in patients admitted from the community (9/28; 32%) compared to those transferred from other healthcare facilities (4/9; 44%). All admitted patients who did not exhibit colonization at baseline and who were resident within the hospital for longer than 4 weeks (17/37; 46% of total patients) became colonised by an ESBL-producing Enterobacteriaceae species. No patients acquired MRSA during hospitalisation. Among ESBL Enterobacteriaceae, Escherichia coli (41/62; 66%) and K. pneumoniae [14/62; 23%]) predominated. Nineteen percent (7/37) of patients demised during their hospitalization. Both the Vitek system and Sensititre Gram Negative Xtra (GNFX2) MIC plates susceptibilities were similar for most antimicrobials, however there were discrepancies for tigecycline susceptibility profiles. A high number of isolates exhibited resistance to aminoglycosides and fluoroquinolones. Genes encoding for ESBLs (CTX-M-14, CTX-M-15, SHV-28, OXA-1, and OXY-2-9) were detected among ESBL Enterobacteriaceae. Two Enterobacteriaceae isolates with reduced carbapenem susceptibility did not contain carbapenemase-encoding genes. MLST revealed unique sequence types and genetic diversity among the K. pneumoniae isolates from hospitalised patients. However, the source and colonization routes of these isolates could not be determined, which requires further investigation. This study provides insight into the spectrum of bacterial pathogen colonisation in hospitalised TB patients and suggests a review of infection control programs and practices at the TB hospital.
- Full Text:
- Date Issued: 2018
Towards understanding the effect of size variation on the aggressive and feeding behaviours of juvenile dusky kob Argyrosomus japonicus (Pisces: Sciaenidae)
- Authors: Babane, Siviwe Elvis
- Date: 2018
- Subjects: Argyrosomus -- Feeding and feeds , Aquaculture , Fishes -- Cannibalism , Fishes -- Feeding and feeds
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/59592 , vital:27629
- Description: Many studies have been conducted on the effect of size-grading in other fish species. However, there is a paucity of scientific information on the effects of size variation on cannibalism of juvenile dusky kob. Thus, a study focusing on the effect of size variation on juvenile dusky kob aggressive and feeding (browsing) behaviours was conducted. Three separate groups of hatchery-reared juvenile dusky kob of were obtained from Oceanwise (Pty) Ltd for use in a series of three experimental trials. In all trials, juvenile fish of the same age were size-graded and the COV-value was used to determine the size variation. The focal fish (largest fish) was exposed to groups of fish with different size variation for 30-min. behavioural observations before and after feeding in randomised trials. The first experimental trial (Chapter 2) quantified the effect of increasing size variation and observation time on the aggressive and browsing behaviours of juvenile dusky kob. On average, juvenile dusky kob weighed 3.60 ± 0.68 g fish-1 and measured 5.8 ± 0.41 mm. Each focal fish was observed (a) before feeding in the morning, (b) 2 h after feeding, (c) 6 h after feeding and (d) 12 h after feeding. Fish increased browsing behaviours (averaging 6.60 ± 0.56) and decreased intimidating aggressive behaviours (18.60 ± 1.39) 12 h after feeding. Other aggressive behaviours occurred but did not differ between observation times. Aggressive and browsing behaviours positively correlated with size variation variables, predominantly, 12 h after feeding. An average frequency of 19 chases were observed positively correlated with size variation, followed by average frequencies of 17 body bites and browses, and 11 tail bites per 30 min. Some behaviours including average frequencies of 0.2 chases, 4 tail bites, 2.4 intimidating and 0.3 browsing behaviours negatively correlated with the size variation, generally closer to the last meal. These preliminary observations thus showed that fish have become hungry approximately 6-12 h after feeding and substituted certain behaviours for others as time after feeding passed and as size variation increased. The second experimental trial (Chapter 3) consisted of the observations further testing the relationship between aggressive behaviours and size variation of juveniles of dusky kob averaging 0.43 ± 0.27 g fish-1. The focal fish was exposed to groups of fish of four size variation (COV) treatments for observations before and 12 h after feeding. Aggressive behaviours positively correlated with size variation both before and 12 h after feeding. An average frequency of 437 body bites positively correlated more often with COV, followed by average frequencies of 365 intimidating behaviours and 199 tail bites per 30 min., respectively, before and 12 h after feeding. The least often exhibited aggressive behaviours averaged 26 chases while positively correlating with size variation on the times specified. An average frequency of 311 intimidating behaviours before and after feeding including average of 28 tail bites after feeding negatively correlated with size variation. This may relate to shift of behaviours depending on the needs and capacity of the fish. Apparently, aggressive fish can change its behaviour as a function of COV-values rather than the mean size of the other fish. The third trial (Chapter 4) investigated the effect of the aggressor’s (focal fish) size in relation its aggressive and browsing behaviours to other fish (non-focal fish). Juvenile fish used for this trial, on average, weighed 30 ± 7.63 g fish-1. Aggressive and browsing behaviours were observed in four treatments of a) high COV and mean weight below, b) low COV and mean weight less, c) high COV and mean weight equivalent to and d) low COV and mean weight higher than that of the focal fish. Increased frequencies of aggressive and browsing behaviours per 30 min. occurred in treatment A, sharing similar frequencies in treatment C, compared to the other treatments (B and D) which shared certain frequencies. The intimidating behaviours predominated, followed by browsing, body bites, chases and tail bites, respectively. The results of the overall study suggest that the time passed after feeding and increasing size variation and differences facilitated aggressive and browsing behaviours in juvenile dusky kob. Dusky kob showed increasing aggressive behaviours as early as in the first two weeks after hatching, averaging 0.43 ± 0.27 g fish-1 with the frequency correlating with size differences. Consistent size-grading technique in the same-age fish should be used to manage size variation associated with aggressive behaviours. The period of about 4-6 h after feeding may explain the noticeable increased aggressive and browsing behaviours. Thus, fish should be fed immediately before or after evacuation of their guts to maintain less-aggressive behaviours of juvenile dusky kob. Fish generally increased aggressive and browsing acts before and long time after feeding than closer to after feeding. The study has provided the fundamental scientific groundwork for fish farmers and future researchers can further explore size variation, time after feeding and gut evacuation rate as critical components of aggressive behaviours. The scientific knowledge of aggressive and cannibalistic behaviours has essential application in farming management to achieve improved survival and growth rates in juvenile fish.
- Full Text:
- Date Issued: 2018
- Authors: Babane, Siviwe Elvis
- Date: 2018
- Subjects: Argyrosomus -- Feeding and feeds , Aquaculture , Fishes -- Cannibalism , Fishes -- Feeding and feeds
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/59592 , vital:27629
- Description: Many studies have been conducted on the effect of size-grading in other fish species. However, there is a paucity of scientific information on the effects of size variation on cannibalism of juvenile dusky kob. Thus, a study focusing on the effect of size variation on juvenile dusky kob aggressive and feeding (browsing) behaviours was conducted. Three separate groups of hatchery-reared juvenile dusky kob of were obtained from Oceanwise (Pty) Ltd for use in a series of three experimental trials. In all trials, juvenile fish of the same age were size-graded and the COV-value was used to determine the size variation. The focal fish (largest fish) was exposed to groups of fish with different size variation for 30-min. behavioural observations before and after feeding in randomised trials. The first experimental trial (Chapter 2) quantified the effect of increasing size variation and observation time on the aggressive and browsing behaviours of juvenile dusky kob. On average, juvenile dusky kob weighed 3.60 ± 0.68 g fish-1 and measured 5.8 ± 0.41 mm. Each focal fish was observed (a) before feeding in the morning, (b) 2 h after feeding, (c) 6 h after feeding and (d) 12 h after feeding. Fish increased browsing behaviours (averaging 6.60 ± 0.56) and decreased intimidating aggressive behaviours (18.60 ± 1.39) 12 h after feeding. Other aggressive behaviours occurred but did not differ between observation times. Aggressive and browsing behaviours positively correlated with size variation variables, predominantly, 12 h after feeding. An average frequency of 19 chases were observed positively correlated with size variation, followed by average frequencies of 17 body bites and browses, and 11 tail bites per 30 min. Some behaviours including average frequencies of 0.2 chases, 4 tail bites, 2.4 intimidating and 0.3 browsing behaviours negatively correlated with the size variation, generally closer to the last meal. These preliminary observations thus showed that fish have become hungry approximately 6-12 h after feeding and substituted certain behaviours for others as time after feeding passed and as size variation increased. The second experimental trial (Chapter 3) consisted of the observations further testing the relationship between aggressive behaviours and size variation of juveniles of dusky kob averaging 0.43 ± 0.27 g fish-1. The focal fish was exposed to groups of fish of four size variation (COV) treatments for observations before and 12 h after feeding. Aggressive behaviours positively correlated with size variation both before and 12 h after feeding. An average frequency of 437 body bites positively correlated more often with COV, followed by average frequencies of 365 intimidating behaviours and 199 tail bites per 30 min., respectively, before and 12 h after feeding. The least often exhibited aggressive behaviours averaged 26 chases while positively correlating with size variation on the times specified. An average frequency of 311 intimidating behaviours before and after feeding including average of 28 tail bites after feeding negatively correlated with size variation. This may relate to shift of behaviours depending on the needs and capacity of the fish. Apparently, aggressive fish can change its behaviour as a function of COV-values rather than the mean size of the other fish. The third trial (Chapter 4) investigated the effect of the aggressor’s (focal fish) size in relation its aggressive and browsing behaviours to other fish (non-focal fish). Juvenile fish used for this trial, on average, weighed 30 ± 7.63 g fish-1. Aggressive and browsing behaviours were observed in four treatments of a) high COV and mean weight below, b) low COV and mean weight less, c) high COV and mean weight equivalent to and d) low COV and mean weight higher than that of the focal fish. Increased frequencies of aggressive and browsing behaviours per 30 min. occurred in treatment A, sharing similar frequencies in treatment C, compared to the other treatments (B and D) which shared certain frequencies. The intimidating behaviours predominated, followed by browsing, body bites, chases and tail bites, respectively. The results of the overall study suggest that the time passed after feeding and increasing size variation and differences facilitated aggressive and browsing behaviours in juvenile dusky kob. Dusky kob showed increasing aggressive behaviours as early as in the first two weeks after hatching, averaging 0.43 ± 0.27 g fish-1 with the frequency correlating with size differences. Consistent size-grading technique in the same-age fish should be used to manage size variation associated with aggressive behaviours. The period of about 4-6 h after feeding may explain the noticeable increased aggressive and browsing behaviours. Thus, fish should be fed immediately before or after evacuation of their guts to maintain less-aggressive behaviours of juvenile dusky kob. Fish generally increased aggressive and browsing acts before and long time after feeding than closer to after feeding. The study has provided the fundamental scientific groundwork for fish farmers and future researchers can further explore size variation, time after feeding and gut evacuation rate as critical components of aggressive behaviours. The scientific knowledge of aggressive and cannibalistic behaviours has essential application in farming management to achieve improved survival and growth rates in juvenile fish.
- Full Text:
- Date Issued: 2018
The use of a silica based coating to reduce moisture absorption of flax fibre reinforced composites
- Authors: Bala, Sandisiwe
- Date: 2018
- Subjects: Chromatographic analysis , Nonwoven fabrics Nanocomposites (Materials)
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/23349 , vital:30534
- Description: This study deals with the synthesis of silica particles, treatment of flax fabrics with silica, and the preparation and characterization of silica coated flax fibre reinforced phenolic composites treated with silica. Silica particles were successfully prepared by means of a hydrolytic sol-gel route. Two types of silica were prepared by employing either ammonium hydroxide solution as a base catalyst and acetic acid as an acid catalyst. The silica sols were then aged from three to five days in order to determine the effects of aging on the final properties of the silica. The chemical composition of the silica particles was evaluated by fourier transform infrared spectroscopy (FTIR), thermal stability was determined by using thermogravimetric analysis (TGA), and structural and physical properties of the silica particles prepared via two catalysts and aged at different time periods was investigated by x-ray diffraction (XRD). Silica sols, prepared at different conditions were then applied to treat flax fabrics (untreated/scoured) by use of the padding technique. The effects of the silica treatments on flax fabrics were evaluated by FTIR, XRD, determination of moisture content and mechanical properties. The FTIR revealed presence of silica groups on the silica treated flax fabrics, thus resulting in low moisture content for silica treated flax fabrics. XRD analysis revealed that aging the silica sols increases the crystallinity index. Silica treated flax fabrics showed enhanced tensile properties in the weft direction. The thermal, mechanical and water sorption properties of the composites were evaluated. TGA results revealed that the decomposition temperatures of the silica treated composites shifted to higher temperatures. Thus, silica treatments lead to an improvement in thermal stability for composites. A reduction in mechanical properties was also observed for silica treated composites and some composites showed a reduction in water absorption. It was quite evident from this study that the type of catalyst system used in silica preparation has a great influence on the final properties of the silica, which to a large extent changes the thermal, mechanical and water sorption properties of the composites.
- Full Text:
- Date Issued: 2018
- Authors: Bala, Sandisiwe
- Date: 2018
- Subjects: Chromatographic analysis , Nonwoven fabrics Nanocomposites (Materials)
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/23349 , vital:30534
- Description: This study deals with the synthesis of silica particles, treatment of flax fabrics with silica, and the preparation and characterization of silica coated flax fibre reinforced phenolic composites treated with silica. Silica particles were successfully prepared by means of a hydrolytic sol-gel route. Two types of silica were prepared by employing either ammonium hydroxide solution as a base catalyst and acetic acid as an acid catalyst. The silica sols were then aged from three to five days in order to determine the effects of aging on the final properties of the silica. The chemical composition of the silica particles was evaluated by fourier transform infrared spectroscopy (FTIR), thermal stability was determined by using thermogravimetric analysis (TGA), and structural and physical properties of the silica particles prepared via two catalysts and aged at different time periods was investigated by x-ray diffraction (XRD). Silica sols, prepared at different conditions were then applied to treat flax fabrics (untreated/scoured) by use of the padding technique. The effects of the silica treatments on flax fabrics were evaluated by FTIR, XRD, determination of moisture content and mechanical properties. The FTIR revealed presence of silica groups on the silica treated flax fabrics, thus resulting in low moisture content for silica treated flax fabrics. XRD analysis revealed that aging the silica sols increases the crystallinity index. Silica treated flax fabrics showed enhanced tensile properties in the weft direction. The thermal, mechanical and water sorption properties of the composites were evaluated. TGA results revealed that the decomposition temperatures of the silica treated composites shifted to higher temperatures. Thus, silica treatments lead to an improvement in thermal stability for composites. A reduction in mechanical properties was also observed for silica treated composites and some composites showed a reduction in water absorption. It was quite evident from this study that the type of catalyst system used in silica preparation has a great influence on the final properties of the silica, which to a large extent changes the thermal, mechanical and water sorption properties of the composites.
- Full Text:
- Date Issued: 2018
An analysis on the use of web-based ontology to support ubiquitous learning in South African secondary schools
- Bamigboye, Oluwatosin Omotoyosi
- Authors: Bamigboye, Oluwatosin Omotoyosi
- Date: 2018
- Subjects: Internet in education World Wide Web Ontology
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10353/12859 , vital:39385
- Description: There is certainly a need to upgrade our educational system and this can be done through technology-enhanced learning. Technology-enhanced learning can be achieved by developing a web-based ontology e-learning platform, which allows learning to take place ubiquitously. In achieving this task, this research is focusing on analyzing the use of web-based ontology to support the design and implementation of a ubiquitous learning system in South Africa. The implemented web-based ontology e-learning system was deployed and tested. The system testing was done on two variables (Information retrieval and Scalability) of localhost and client system, with the following testing metrics: time is taken for information retrieval, request time to process the request, transfer rate, time localhost receives request, time to respond, roundtrip time for request and network usage. The metrics testing was achieved using apache benchmarking console and gnuplot application to generate the data captured and performance graph, while Wireshark was also used to test/analyze round trip time and network usage through the deployed system. The results of the findings in this study show that the relationship between student and learning content becomes explicit when using ontology technology in searching, organizing, gathering and development content. Results obtained from information retrieval show that the transfer rate of information on localhost for 100 request @ current level of 5 is 37169.89kb/s, while on the client’s system, the transfer rate was 48494.36kb/s which was due to multiple request on the client’s side. Results obtained on scalability shows the round trip time which was (time to respond-time to request). The longest roundtrip was 8 seconds as a result of network being congested with multiple packets request from various sources trying to access the localhost at the same time while the fastest was 1 seconds. The implications of this results show that web-based ontology e-learning system has a positive input to teaching and learning processes in schools for content retrieval and network usage. The system furthermore shows the relationship adopted by learners and teachers, and also the match needs that arise in between. The contribution of this study adds to the existing discoveries on the use of web-based and knowledge-based ontology.
- Full Text:
- Date Issued: 2018
- Authors: Bamigboye, Oluwatosin Omotoyosi
- Date: 2018
- Subjects: Internet in education World Wide Web Ontology
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10353/12859 , vital:39385
- Description: There is certainly a need to upgrade our educational system and this can be done through technology-enhanced learning. Technology-enhanced learning can be achieved by developing a web-based ontology e-learning platform, which allows learning to take place ubiquitously. In achieving this task, this research is focusing on analyzing the use of web-based ontology to support the design and implementation of a ubiquitous learning system in South Africa. The implemented web-based ontology e-learning system was deployed and tested. The system testing was done on two variables (Information retrieval and Scalability) of localhost and client system, with the following testing metrics: time is taken for information retrieval, request time to process the request, transfer rate, time localhost receives request, time to respond, roundtrip time for request and network usage. The metrics testing was achieved using apache benchmarking console and gnuplot application to generate the data captured and performance graph, while Wireshark was also used to test/analyze round trip time and network usage through the deployed system. The results of the findings in this study show that the relationship between student and learning content becomes explicit when using ontology technology in searching, organizing, gathering and development content. Results obtained from information retrieval show that the transfer rate of information on localhost for 100 request @ current level of 5 is 37169.89kb/s, while on the client’s system, the transfer rate was 48494.36kb/s which was due to multiple request on the client’s side. Results obtained on scalability shows the round trip time which was (time to respond-time to request). The longest roundtrip was 8 seconds as a result of network being congested with multiple packets request from various sources trying to access the localhost at the same time while the fastest was 1 seconds. The implications of this results show that web-based ontology e-learning system has a positive input to teaching and learning processes in schools for content retrieval and network usage. The system furthermore shows the relationship adopted by learners and teachers, and also the match needs that arise in between. The contribution of this study adds to the existing discoveries on the use of web-based and knowledge-based ontology.
- Full Text:
- Date Issued: 2018
Developing a citizen technician based approach to suspended sediment monitoring in the Tsitsa River catchment, Eastern Cape, South Africa
- Authors: Bannatyne, Laura Joan
- Date: 2018
- Subjects: Sediments (Geology) -- Management , Sediments (Geology) -- South Africa -- Eastern Cape , Watersheds -- South Africa -- Eastern Cape , Suspended sediments -- South Africa -- Eastern Cape , Suspended sediments -- Monitoring -- Citizen participation , Tsitsa River
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/62593 , vital:28211
- Description: Suspended sediment (SS) in channels is spatiotemporally heterogeneous and, over the long term, is known to be moved predominantly by flood flows with return periods of ~1 - 1.5 years. Flood flows in the Tsitsa catchment (Eastern Cape Province, South Africa) are unpredictable, and display a wide range of discharges. Direct, flood-focused SS sampling at sub-catchment scale was required to provide a SS baseline against which to monitor the impact on SS of catchment rehabilitation interventions, to determine the relative contributions of sub-catchments to SS loads and yields at the site of the proposed Ntabelanga Dam wall, and to verify modelled SS baselines, loads and yields. Approaches to SS sampling relying on researcher presence and/or installed equipment to adequately monitor SS through flood flows were precluded by cost, and the physical and socioeconomic conditions in the project area. A citizen technician (CT)-based flood-focused approach to direct SS sampling was developed and implemented. It was assessed in terms of its efficiency and effectiveness, the proficiency of the laboratory analysis methods, and the accuracy of the resulting SS data. A basic laboratory protocol for SSC analysis was developed, but is not the focus of this thesis. Using basic sampling equipment and smartphone-based reporting protocols, local residents at eleven points on the Tsitsa River and its major tributaries were employed as CTs. They were paid to take water samples during daylight hours at sub-daily timestep, with the emphasis on sampling through flood flows. The method was innovative in that it opted for manual sampling against a global trend towards instrumentation. Whilst the management of CTs formed a significant project component, the CTs benefitted directly through remuneration and work experience opportunities. The sampling method was evaluated at four sites from December 2015 - May 2016. The CTs were found to have efficiently and effectively sampled SS through a range of water levels, particularly in the main Tsitsa channel. An acceptable level of proficiency and accuracy was achieved, and many flood events were successfully defined by multiple data points. The method was chiefly limited by the inability of CTs to sample overnight rises and peaks occurring as a result of afternoon thunderstorms, particularly in small tributaries. The laboratory process was responsible for some losses in proficiency and accuracy. Improved laboratory quality control was therefore recommended. The CT-based approach can be adapted to other spatial and temporal scales in other areas, and to other environmental monitoring applications.
- Full Text:
- Date Issued: 2018
- Authors: Bannatyne, Laura Joan
- Date: 2018
- Subjects: Sediments (Geology) -- Management , Sediments (Geology) -- South Africa -- Eastern Cape , Watersheds -- South Africa -- Eastern Cape , Suspended sediments -- South Africa -- Eastern Cape , Suspended sediments -- Monitoring -- Citizen participation , Tsitsa River
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/62593 , vital:28211
- Description: Suspended sediment (SS) in channels is spatiotemporally heterogeneous and, over the long term, is known to be moved predominantly by flood flows with return periods of ~1 - 1.5 years. Flood flows in the Tsitsa catchment (Eastern Cape Province, South Africa) are unpredictable, and display a wide range of discharges. Direct, flood-focused SS sampling at sub-catchment scale was required to provide a SS baseline against which to monitor the impact on SS of catchment rehabilitation interventions, to determine the relative contributions of sub-catchments to SS loads and yields at the site of the proposed Ntabelanga Dam wall, and to verify modelled SS baselines, loads and yields. Approaches to SS sampling relying on researcher presence and/or installed equipment to adequately monitor SS through flood flows were precluded by cost, and the physical and socioeconomic conditions in the project area. A citizen technician (CT)-based flood-focused approach to direct SS sampling was developed and implemented. It was assessed in terms of its efficiency and effectiveness, the proficiency of the laboratory analysis methods, and the accuracy of the resulting SS data. A basic laboratory protocol for SSC analysis was developed, but is not the focus of this thesis. Using basic sampling equipment and smartphone-based reporting protocols, local residents at eleven points on the Tsitsa River and its major tributaries were employed as CTs. They were paid to take water samples during daylight hours at sub-daily timestep, with the emphasis on sampling through flood flows. The method was innovative in that it opted for manual sampling against a global trend towards instrumentation. Whilst the management of CTs formed a significant project component, the CTs benefitted directly through remuneration and work experience opportunities. The sampling method was evaluated at four sites from December 2015 - May 2016. The CTs were found to have efficiently and effectively sampled SS through a range of water levels, particularly in the main Tsitsa channel. An acceptable level of proficiency and accuracy was achieved, and many flood events were successfully defined by multiple data points. The method was chiefly limited by the inability of CTs to sample overnight rises and peaks occurring as a result of afternoon thunderstorms, particularly in small tributaries. The laboratory process was responsible for some losses in proficiency and accuracy. Improved laboratory quality control was therefore recommended. The CT-based approach can be adapted to other spatial and temporal scales in other areas, and to other environmental monitoring applications.
- Full Text:
- Date Issued: 2018
Deep learning applied to the semantic segmentation of tyre stockpiles
- Barfknecht, Nicholas Christopher
- Authors: Barfknecht, Nicholas Christopher
- Date: 2018
- Subjects: Neural networks (Computer science)
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/23947 , vital:30647
- Description: The global push for manufacturing which is environmentally sustainable has disrupted standard methods of waste tyre disposal. This push is further intensified by the health and safety risks discarded tyres pose to the surrounding population. Waste tyre recycling initiatives in South Africa are on the increase; however, there is still a growing number of undocumented tyre stockpiles developing throughout the country. The plans put in place to eradicate these tyre stockpiles have been met with collection, transport and storage logistical issues caused by the remoteness and distant locales. Eastwood (2016) aimed at optimising the logistics associated with collection, by estimating the number of visible tyres from images of tyre stockpiles. This research was limited by the need for manual segmentation of each tyre stockpile located within each image. This research proposes the use of semantic segmentation to automatically segment images of tyre stockpiles. An initial review of neural network, convolutional network and semantic segmentation literature resulted in the selection of Dilated Net as the semantic segmentation architecture for this research. Dilated Net builds upon the VGG-16 classification architecture to perform semantic segmentation. This resulted in classification experiments which were evaluated using precision, recall and f1-score. The results indicated that regardless of tyre stockpile image dimension, fairly accurate levels of classification accuracy can be attained. This was followed by semantic segmentation experiments which made use of intersection over union (IoU) and pixel accuracy to evaluate the effectiveness of Dilated Net on images of tyre stockpiles. The results indicated that accurate tyre stockpile segmentation regions can be obtained and that the trained model generalises well to unseen images.
- Full Text:
- Date Issued: 2018
- Authors: Barfknecht, Nicholas Christopher
- Date: 2018
- Subjects: Neural networks (Computer science)
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/23947 , vital:30647
- Description: The global push for manufacturing which is environmentally sustainable has disrupted standard methods of waste tyre disposal. This push is further intensified by the health and safety risks discarded tyres pose to the surrounding population. Waste tyre recycling initiatives in South Africa are on the increase; however, there is still a growing number of undocumented tyre stockpiles developing throughout the country. The plans put in place to eradicate these tyre stockpiles have been met with collection, transport and storage logistical issues caused by the remoteness and distant locales. Eastwood (2016) aimed at optimising the logistics associated with collection, by estimating the number of visible tyres from images of tyre stockpiles. This research was limited by the need for manual segmentation of each tyre stockpile located within each image. This research proposes the use of semantic segmentation to automatically segment images of tyre stockpiles. An initial review of neural network, convolutional network and semantic segmentation literature resulted in the selection of Dilated Net as the semantic segmentation architecture for this research. Dilated Net builds upon the VGG-16 classification architecture to perform semantic segmentation. This resulted in classification experiments which were evaluated using precision, recall and f1-score. The results indicated that regardless of tyre stockpile image dimension, fairly accurate levels of classification accuracy can be attained. This was followed by semantic segmentation experiments which made use of intersection over union (IoU) and pixel accuracy to evaluate the effectiveness of Dilated Net on images of tyre stockpiles. The results indicated that accurate tyre stockpile segmentation regions can be obtained and that the trained model generalises well to unseen images.
- Full Text:
- Date Issued: 2018
The use of building information modelling as a tool to improve informed design communication between student and lecturer during critique sessions
- Authors: Basson, Jean-Pierre
- Date: 2018
- Subjects: Building information modeling , Building -- Data processing Construction industry -- South Africa Construction projects -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/23680 , vital:30598
- Description: Within the design studio at the Department of Architecture, Nelson Mandela University, the timeous submission of design projects is a problem. After close inspection, it is noted that students spend weeks on conceptual design ideas with no progressions towards completion. The purpose of the study is thus to determine whether building information modelling (BIM), as opposed to the traditional method of design, can be used to improve informed design communication during conceptual design for the first-year master of architecture students and contribute to timeous design project submission. A cohort comparison rubric will be used as the method for looking at the qualitative attributes of design intention, function, aesthetics, and sustainability. The 2016 cohort made use of the traditional design method, whereas for the 2017 cohort the BIM course was introduced in the computer module with implementation in the design studio. The work of nine students from both cohorts was analysed and findings include the following: improved drawing type availability, accuracy, and quality; reduced time spent on redundant work; inclusive discussions compared to isolated critique sessions; reduced printing costs - and the establishment of “what if” scenarios early in the project. Based upon the research findings it can be concluded that BIM as a teaching strategy and process has the capability of improving the communication between student and lecturer in the conceptual stage, thereby leading to a more timeous submission. It is recommended that BIM education must be incorporated in the undergraduate programme thereby providing students with an appropriate platform for expressing conceptual ideas more effectively within the design course.
- Full Text:
- Date Issued: 2018
- Authors: Basson, Jean-Pierre
- Date: 2018
- Subjects: Building information modeling , Building -- Data processing Construction industry -- South Africa Construction projects -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/23680 , vital:30598
- Description: Within the design studio at the Department of Architecture, Nelson Mandela University, the timeous submission of design projects is a problem. After close inspection, it is noted that students spend weeks on conceptual design ideas with no progressions towards completion. The purpose of the study is thus to determine whether building information modelling (BIM), as opposed to the traditional method of design, can be used to improve informed design communication during conceptual design for the first-year master of architecture students and contribute to timeous design project submission. A cohort comparison rubric will be used as the method for looking at the qualitative attributes of design intention, function, aesthetics, and sustainability. The 2016 cohort made use of the traditional design method, whereas for the 2017 cohort the BIM course was introduced in the computer module with implementation in the design studio. The work of nine students from both cohorts was analysed and findings include the following: improved drawing type availability, accuracy, and quality; reduced time spent on redundant work; inclusive discussions compared to isolated critique sessions; reduced printing costs - and the establishment of “what if” scenarios early in the project. Based upon the research findings it can be concluded that BIM as a teaching strategy and process has the capability of improving the communication between student and lecturer in the conceptual stage, thereby leading to a more timeous submission. It is recommended that BIM education must be incorporated in the undergraduate programme thereby providing students with an appropriate platform for expressing conceptual ideas more effectively within the design course.
- Full Text:
- Date Issued: 2018
Synthesis and application of novel coumarin-triazole-based polymeric sensors towards metal ion sensing
- Authors: Battison, Aidan Leigh
- Date: 2018
- Subjects: Polymers -- Optical properties , Polymers -- Electric properties Biosensors
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/23636 , vital:30591
- Description: One of the greatest challenges in the South African society is the pollutants which we are exposed to within our environment. The mismanagement and release of toxic analytes via different chemical, agricultural and industrial processes has led to a critical need for advanced monitoring systems for environmental protection, remediation and restoration. Industrial processes release a plethora of different pollutants into the earth, atmosphere, and aquatic ecosystems. Most pollutant causing activities are due to mining, agriculture, industry and chemical storage. Most contaminants released by these processes are not biodegradable and may be able to exude into water systems where they present an immense threat to environmental and human health. The number of different analytes released into the environment is greater than the number of sensors able to detect these species. Clearly, there is a need for a rapid and low-cost means of detection, recognition, and monitoring of these analytes. Fluorescent coumarin-triazole-based polymeric materials were designed and investigated as potential sensors for these metal ionic species. The Cu(I)-catalyzed 1,3-dipolar cycloaddition of azides and alkynes was the focus method of polymerization to form the fluorescence enhancing triazole moiety. The coumarin-triazole units formed the backbone of these polymeric material. The photophysical properties of the starting monomers and polymers were investigated in THF solvent. The polymers showed to have higher absorption and emission intensities than their respective starting monomers. The chemosensing capabilities of the polymers for metal ions were investigated through their emission properties. The polymers showed to have the greatest response towards Hg2+ and Ag+. Furthermore, the polymers displayed a reversible response towards Hg2+ in the presence of EDTA. The most responsive and reversible polymer system was applied for metal sensing capabilities towards Hg2+ from a known water source. This polymer proved to be a sensitive and reversible chemosensor for Hg2+ ions. The site of metal complexation on the polymer systems was verified by 1H NMR and FT-IR spectroscopy and was found to be mainly the triazole moieties from the polymer backbone. Finally, the possible mechanism for the fluorescent response of Hg2+ and Ag+ was also investigated.
- Full Text:
- Date Issued: 2018
- Authors: Battison, Aidan Leigh
- Date: 2018
- Subjects: Polymers -- Optical properties , Polymers -- Electric properties Biosensors
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/23636 , vital:30591
- Description: One of the greatest challenges in the South African society is the pollutants which we are exposed to within our environment. The mismanagement and release of toxic analytes via different chemical, agricultural and industrial processes has led to a critical need for advanced monitoring systems for environmental protection, remediation and restoration. Industrial processes release a plethora of different pollutants into the earth, atmosphere, and aquatic ecosystems. Most pollutant causing activities are due to mining, agriculture, industry and chemical storage. Most contaminants released by these processes are not biodegradable and may be able to exude into water systems where they present an immense threat to environmental and human health. The number of different analytes released into the environment is greater than the number of sensors able to detect these species. Clearly, there is a need for a rapid and low-cost means of detection, recognition, and monitoring of these analytes. Fluorescent coumarin-triazole-based polymeric materials were designed and investigated as potential sensors for these metal ionic species. The Cu(I)-catalyzed 1,3-dipolar cycloaddition of azides and alkynes was the focus method of polymerization to form the fluorescence enhancing triazole moiety. The coumarin-triazole units formed the backbone of these polymeric material. The photophysical properties of the starting monomers and polymers were investigated in THF solvent. The polymers showed to have higher absorption and emission intensities than their respective starting monomers. The chemosensing capabilities of the polymers for metal ions were investigated through their emission properties. The polymers showed to have the greatest response towards Hg2+ and Ag+. Furthermore, the polymers displayed a reversible response towards Hg2+ in the presence of EDTA. The most responsive and reversible polymer system was applied for metal sensing capabilities towards Hg2+ from a known water source. This polymer proved to be a sensitive and reversible chemosensor for Hg2+ ions. The site of metal complexation on the polymer systems was verified by 1H NMR and FT-IR spectroscopy and was found to be mainly the triazole moieties from the polymer backbone. Finally, the possible mechanism for the fluorescent response of Hg2+ and Ag+ was also investigated.
- Full Text:
- Date Issued: 2018
A reconciliation study of different resource estimation methods and drill hole spacing as applied to the Langer Heinrich calcrete-hosted uranium deposit, Namibia
- Authors: Baufeldt, Sven
- Date: 2018
- Subjects: Uranium -- Namibia , Calcretes -- Namibia , Carnotite -- Namibia , Uranium mines and mining -- Namibia , Uranium ores -- Geology -- Namibia , Langer-Heinrich Uranium mine
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/62527 , vital:28203
- Description: The Langer Heinrich calcrete hosted uranium deposit is situated approximately 90 km to east of the coastal town of Swakopmund in Namibia. It is run by an Australian owned company, Paladin Energy Limited, along with China National Nuclear Corporation (CNNC) who maintain 25% of the shares. Production commenced in 2007 and has been ongoing. Carnotite is the primary and only ore mineral, and the nature of mineralisation within the Langer Heinrich palaeo channel dictates westward-directed continuous open pit mining. Smaller-scale 1micro pits target near-surface, high-grade, lenses toward the east. The high variability in uranium grade over relatively short distances complicates the grade estimation process. This combined with a low uranium price, and a study aimed at optimising of mine production is one of the key drivers for the research presented in this thesis. The efficacy of four resource estimation techniques, commonly used in the mining industry, are investigated by application to variable exploration, infill drilling and grade-control drill pattern spacing. The drill spacing includes regular grids of 50 m x 50 m, 25 m x 25 m and 12,5 m x 12,5 m exploration data. Also included is grade control drill data, drilled on a 4 m x 4 m spacing. The current selective mining unit (SMU) is 4mE x 4mN x 3mRl which is an indication of the minimum dimension whereby the loading equipment can separate ore from waste. The two datasets are processed by four estimation techniques: Inverse Distance Weighting (IDW, squared and cubed), Ordinary Kriging (OK), Multiple Indicator Kriging (MIK) and Conditional Simulation (CS). The two datasets consisted of real-time mining data from pit G1 (micro-pit) in the eastern parts of the mining licence, and pit H1 (continuous larger open pit) in the western area of the palaeo channel. The reconciliation project aims to provide results suitable for devising optimised mining strategies, particularly in future targets where drill spacing can perhaps be improved to provide suitable data with a greater cost saving strategy. Along with the optimal drill spacing or combination thereof, a preferred estimation technique can be suggested and recommended for future operations that involve mining of surficial calcrete-hosted uranium deposits. Results of this study show that 12,5 m x 12,5 m drill spacing provided estimation accuracies similar to that of the narrow 4 m x 4 m grade control spacing (blast hole drilling spacing). The 12,5 m x 12,5m spacing has potential for accurate grade estimations during mining, and could be supplemented by infill downhole radiometric logging on a 4 m x 4 m spacing when 1 Micro pit: Small pits within palaeo channel usually targeted for their near surface high-grade ore necessary. In general, Multiple Indicator Kriging (MIK) provided the most accurate and robust estimations on the wider spaced exploration data and conditional simulation (CS) proved more efficient on the narrow grade control data. These results correspond with current exploration practices for surficial uranium deposits world-wide. Deposit type, therefore complexity and hence SMU sizes play a pivotal role in drill hole planning and estimation accuracies.
- Full Text:
- Date Issued: 2018
- Authors: Baufeldt, Sven
- Date: 2018
- Subjects: Uranium -- Namibia , Calcretes -- Namibia , Carnotite -- Namibia , Uranium mines and mining -- Namibia , Uranium ores -- Geology -- Namibia , Langer-Heinrich Uranium mine
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/62527 , vital:28203
- Description: The Langer Heinrich calcrete hosted uranium deposit is situated approximately 90 km to east of the coastal town of Swakopmund in Namibia. It is run by an Australian owned company, Paladin Energy Limited, along with China National Nuclear Corporation (CNNC) who maintain 25% of the shares. Production commenced in 2007 and has been ongoing. Carnotite is the primary and only ore mineral, and the nature of mineralisation within the Langer Heinrich palaeo channel dictates westward-directed continuous open pit mining. Smaller-scale 1micro pits target near-surface, high-grade, lenses toward the east. The high variability in uranium grade over relatively short distances complicates the grade estimation process. This combined with a low uranium price, and a study aimed at optimising of mine production is one of the key drivers for the research presented in this thesis. The efficacy of four resource estimation techniques, commonly used in the mining industry, are investigated by application to variable exploration, infill drilling and grade-control drill pattern spacing. The drill spacing includes regular grids of 50 m x 50 m, 25 m x 25 m and 12,5 m x 12,5 m exploration data. Also included is grade control drill data, drilled on a 4 m x 4 m spacing. The current selective mining unit (SMU) is 4mE x 4mN x 3mRl which is an indication of the minimum dimension whereby the loading equipment can separate ore from waste. The two datasets are processed by four estimation techniques: Inverse Distance Weighting (IDW, squared and cubed), Ordinary Kriging (OK), Multiple Indicator Kriging (MIK) and Conditional Simulation (CS). The two datasets consisted of real-time mining data from pit G1 (micro-pit) in the eastern parts of the mining licence, and pit H1 (continuous larger open pit) in the western area of the palaeo channel. The reconciliation project aims to provide results suitable for devising optimised mining strategies, particularly in future targets where drill spacing can perhaps be improved to provide suitable data with a greater cost saving strategy. Along with the optimal drill spacing or combination thereof, a preferred estimation technique can be suggested and recommended for future operations that involve mining of surficial calcrete-hosted uranium deposits. Results of this study show that 12,5 m x 12,5 m drill spacing provided estimation accuracies similar to that of the narrow 4 m x 4 m grade control spacing (blast hole drilling spacing). The 12,5 m x 12,5m spacing has potential for accurate grade estimations during mining, and could be supplemented by infill downhole radiometric logging on a 4 m x 4 m spacing when 1 Micro pit: Small pits within palaeo channel usually targeted for their near surface high-grade ore necessary. In general, Multiple Indicator Kriging (MIK) provided the most accurate and robust estimations on the wider spaced exploration data and conditional simulation (CS) proved more efficient on the narrow grade control data. These results correspond with current exploration practices for surficial uranium deposits world-wide. Deposit type, therefore complexity and hence SMU sizes play a pivotal role in drill hole planning and estimation accuracies.
- Full Text:
- Date Issued: 2018
The effect of water temperature on the distribution of the Eastern Cape redfin minnow, Pseudobarbus afer (Peters, 1864)
- Authors: Bloy, Lesley Elizabeth
- Date: 2018
- Subjects: Minnows -- South Africa -- Eastern Cape , Cyprinidae -- South Africa -- Eastern Cape , Minnows -- Effect of temperature on -- South Africa -- Eastern Cape , Minnows -- Effect of exotic animals on -- South Africa -- Eastern Cape , Introduced organisms -- South Africa -- Eastern Cape
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/62017 , vital:28096
- Description: The main objective of this MSc study was to disentangle whether temperature or the presence of non-native fish was limiting the distribution of Pseudobarbus afer (Peters, 1864) in the Blindekloof stream, Eastern Cape, South Africa. The aims were to: i) describe the thermal regime of the Blindekloof stream; ii) conduct experiments to determine the preferred and critical temperatures of P. afer and; iii) use snorkel surveys to contextualise the distribution of both native and non-native fishes in the Blindekloof stream to assess whether the downstream distribution of P. afer was likely to be influenced by temperature or by the presence of non-native, predatory fishes. To describe the thermal regime, year-long temperature data from four long term monitoring sites in the Blindekloof stream were collected using Hobo temperature loggers and analysed in order to better understand the thermal profile, the thermal variation and the rate of temperature change in the stream. The warmest temperatures were recorded in late December 2015 (absolute maximum of 29.4 °C). The coolest water temperatures were recorded in early August 2015 (absolute minimum of 9.5 °C). There is both seasonal and diel variation in temperature with mean, minimum, maximum, 7 day mean, 7 day maximum and temperature ranges differing significantly between sites. With knowledge of the thermal regime of a monitored reach of the Blindekloof stream, the thermal tolerance and preference of P. afer were investigated. The thermal tolerance of P. afer was investigated using the Critical Thermal Method (CTM) which uses non-lethal endpoints (the loss of equilibrium). At low acclimatization temperatures (11.9 ± 0.7 °C), the mean CTmax of P. afer was found to be 29.9 ± 0.7 °C, while at a higher acclimatization temperature (19.9 ± 0.1 °C), the mean CTmax was 35.1 ± 0.6°C. Custom-built thermal choice tanks were used to investigate the thermal preference of P. afer in both summer and winter. The preferred median temperatures for the summer experiments ranged from 22.4 - 29.3 °C while the winter preferred median temperatures ranged from 18.5 - 23.1 °C. The thermal tolerance of P. afer was compared to the thermal regime of the stream and the results suggest that temperature is not limiting the distribution of P. afer. Snorkel surveys were used to determine the distribution of fishes in the Blindekloof stream. Analysis of the distribution data suggests that, in the absence of non-native predatory species, native fishes have the potential to inhabit pools throughout the system right to the confluence, thus predatory fishes and not temperature was limiting P. afer distributions.
- Full Text:
- Date Issued: 2018
- Authors: Bloy, Lesley Elizabeth
- Date: 2018
- Subjects: Minnows -- South Africa -- Eastern Cape , Cyprinidae -- South Africa -- Eastern Cape , Minnows -- Effect of temperature on -- South Africa -- Eastern Cape , Minnows -- Effect of exotic animals on -- South Africa -- Eastern Cape , Introduced organisms -- South Africa -- Eastern Cape
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/62017 , vital:28096
- Description: The main objective of this MSc study was to disentangle whether temperature or the presence of non-native fish was limiting the distribution of Pseudobarbus afer (Peters, 1864) in the Blindekloof stream, Eastern Cape, South Africa. The aims were to: i) describe the thermal regime of the Blindekloof stream; ii) conduct experiments to determine the preferred and critical temperatures of P. afer and; iii) use snorkel surveys to contextualise the distribution of both native and non-native fishes in the Blindekloof stream to assess whether the downstream distribution of P. afer was likely to be influenced by temperature or by the presence of non-native, predatory fishes. To describe the thermal regime, year-long temperature data from four long term monitoring sites in the Blindekloof stream were collected using Hobo temperature loggers and analysed in order to better understand the thermal profile, the thermal variation and the rate of temperature change in the stream. The warmest temperatures were recorded in late December 2015 (absolute maximum of 29.4 °C). The coolest water temperatures were recorded in early August 2015 (absolute minimum of 9.5 °C). There is both seasonal and diel variation in temperature with mean, minimum, maximum, 7 day mean, 7 day maximum and temperature ranges differing significantly between sites. With knowledge of the thermal regime of a monitored reach of the Blindekloof stream, the thermal tolerance and preference of P. afer were investigated. The thermal tolerance of P. afer was investigated using the Critical Thermal Method (CTM) which uses non-lethal endpoints (the loss of equilibrium). At low acclimatization temperatures (11.9 ± 0.7 °C), the mean CTmax of P. afer was found to be 29.9 ± 0.7 °C, while at a higher acclimatization temperature (19.9 ± 0.1 °C), the mean CTmax was 35.1 ± 0.6°C. Custom-built thermal choice tanks were used to investigate the thermal preference of P. afer in both summer and winter. The preferred median temperatures for the summer experiments ranged from 22.4 - 29.3 °C while the winter preferred median temperatures ranged from 18.5 - 23.1 °C. The thermal tolerance of P. afer was compared to the thermal regime of the stream and the results suggest that temperature is not limiting the distribution of P. afer. Snorkel surveys were used to determine the distribution of fishes in the Blindekloof stream. Analysis of the distribution data suggests that, in the absence of non-native predatory species, native fishes have the potential to inhabit pools throughout the system right to the confluence, thus predatory fishes and not temperature was limiting P. afer distributions.
- Full Text:
- Date Issued: 2018
In silico characterization of plasmodial transketolases as potential malaria drug target
- Authors: Boateng, Rita Afriyie
- Date: 2018
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/63540 , vital:28433
- Description: Expected release date-April 2019
- Full Text:
- Date Issued: 2018
- Authors: Boateng, Rita Afriyie
- Date: 2018
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/63540 , vital:28433
- Description: Expected release date-April 2019
- Full Text:
- Date Issued: 2018
An appraisal of warm temperate mangrove estuaries as food patches using zooplankton and RNA: DNA ratios of Gilchristella aestuaria larvae as indicators
- Authors: Bornman, Eugin
- Date: 2018
- Subjects: Mangrove swamps Fishes -- Larvae , Mangrove ecology , Zooplankton
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/17908 , vital:28481
- Description: Mangrove habitats are considered as the ideal fish nursery as they are known to increase the growth and survival of juvenile fishes by providing enhanced food availability and protection. However, most studies have focused on tropical mangroves with a few recent warm temperate studies finding conflicting results. Furthermore, the nursery value of South African mangroves to fishes remain understudied in subtropical areas, while warm temperate mangroves are yet to be evaluated. This study aimed to assess whether mangrove presence leads to any advantage to the larvae of an important estuarine resident fish species, Gilchristella aestuaria, by comparing the food patch quality of South African warm temperate mangrove and non-mangrove estuaries. Results indicate that larvae fed primarily on the dominant prey species, Pseudodiaptomus hessei, Paracrtia longipatella, and Acartiella natalensis. However, postflexion larvae consumed more of the larger species, P. hessei, within the two mangrove estuaries (16.09 %V in Nahoon and 13.79 %V in Xhora) than the two nonmangrove estuaries (12.20 %V in Gonubie and 7.05 %V in Qora), despite other prey species occurring at similar densities. Results indicate that mangrove habitats acted as sediment sinks, slightly reducing the turbidity of these estuaries which resulted in postflexion larvae actively selecting larger, more nutritious prey, which in turn, significantly increased their individual instantaneous growth rates (0.11 ± 0.21 Gi) when compared to postflexion larvae in non-mangrove estuaries (0.09 ± 0.12 Gi). This study found that mangrove presence was significantly related to postflexion larval densities when coupled with abiotic (such as temperature and turbidity) and biotic factors (such as predator-prey interactions). Understanding the spatial and temporal dynamics, predator-prey interactions as well as the growth and survival of G. aestuaria is particularly important as they are key zooplanktivores that are prey to other species in estuarine food webs.
- Full Text:
- Date Issued: 2018
- Authors: Bornman, Eugin
- Date: 2018
- Subjects: Mangrove swamps Fishes -- Larvae , Mangrove ecology , Zooplankton
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/17908 , vital:28481
- Description: Mangrove habitats are considered as the ideal fish nursery as they are known to increase the growth and survival of juvenile fishes by providing enhanced food availability and protection. However, most studies have focused on tropical mangroves with a few recent warm temperate studies finding conflicting results. Furthermore, the nursery value of South African mangroves to fishes remain understudied in subtropical areas, while warm temperate mangroves are yet to be evaluated. This study aimed to assess whether mangrove presence leads to any advantage to the larvae of an important estuarine resident fish species, Gilchristella aestuaria, by comparing the food patch quality of South African warm temperate mangrove and non-mangrove estuaries. Results indicate that larvae fed primarily on the dominant prey species, Pseudodiaptomus hessei, Paracrtia longipatella, and Acartiella natalensis. However, postflexion larvae consumed more of the larger species, P. hessei, within the two mangrove estuaries (16.09 %V in Nahoon and 13.79 %V in Xhora) than the two nonmangrove estuaries (12.20 %V in Gonubie and 7.05 %V in Qora), despite other prey species occurring at similar densities. Results indicate that mangrove habitats acted as sediment sinks, slightly reducing the turbidity of these estuaries which resulted in postflexion larvae actively selecting larger, more nutritious prey, which in turn, significantly increased their individual instantaneous growth rates (0.11 ± 0.21 Gi) when compared to postflexion larvae in non-mangrove estuaries (0.09 ± 0.12 Gi). This study found that mangrove presence was significantly related to postflexion larval densities when coupled with abiotic (such as temperature and turbidity) and biotic factors (such as predator-prey interactions). Understanding the spatial and temporal dynamics, predator-prey interactions as well as the growth and survival of G. aestuaria is particularly important as they are key zooplanktivores that are prey to other species in estuarine food webs.
- Full Text:
- Date Issued: 2018
Energy maximisation strategies of different African herbivores in a fire dominated and nutrient poor grassland ecosystem
- Authors: Brooke, Christopher
- Date: 2018
- Subjects: Grassland ecology -- South Africa -- Eastern Cape , Animals -- Food -- South Africa -- Eastern Cape , Herbivores -- Ecology -- South Africa -- Eastern Cape , Fire ecology -- South Africa -- Eastern Cape
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/21961 , vital:29807
- Description: Fire and herbivory are both major drivers in grassland ecosystems throughout the world. Although these two driving forces act independently from one another the relationship between fire and herbivory may be more significant than either acting on their own. Heterogeneity within the landscape as a result of fire results in herbivores having to adapt their behaviour in space and time. My research focussed on 1) characterising the fire regime on Mkambati Nature Reserve (hereafter Mkambati) and 2) determining the foraging choices and energy maximisation principles displayed by herbivores in relation to the biomass of vegetation and post fire vegetation age. Fire regimes were characterised between 2007-2016 in the low nutrient coastal grasslands of Mkambati in terms of fire season, seasonality of fire-prone weather conditions, fire return interval (FRI) and influence of poaching-related ignitions. Based on these results I then assessed foraging choices in terms of energy maximisation of four large herbivore species. I explored what energy maximisation strategy was employed, i.e. maximisation of daily digestible energy (DDE) (recently burnt low biomass vegetation) or instantaneous digestible energy (IDE) (older high biomass vegetation), by herbivore species with different morpho-physiological traits. Common reedbuck (Redunca arundinum), red hartebeest (Alcelaphus buselaphus subsp. caama), zebra (Equus quagga) and eland (Tragelaphus oryx subsp. oryx) were fitted with GPS satellite tracking collars, and hourly GPS locations (observed) were taken between 2008 and 2016. Using mixed effects models, I compared observed and an associated set of random locations to determine the energy maximisation strategy employed by each species. Our results indicated that fires were concentrated in winter when monthly fire danger weather (FDI) was highest. The mean FRI at Mkambati was <3 years, but varied according to vegetation type, and whether censoring (for open ended FRIs) was applied to estimate mean FRIs. Poachers, with the intention of attracting ungulates, are an important source of ignition at Mkambati. Accordingly FRIs were shorter (approximately 2 years) in areas within 3 km of likely poacher entry points. Although all fires recorded at Mkambati during the study period were of anthropogenic origin, mean FRI still fell within the natural range reported for interior grasslands in South Africa. Based on these findings, underpinned by the fire regime information, I showed that red hartebeest and zebra maximised DDE inside and outside of fire seasons and frequently foraged in low biomass recently burnt grasslands. Eland generally favoured areas where they could maximise IDE outside of the fire season, however during the fire season they switched strategy to maximise DDE. Reedbuck did not maximise IDE or DDE at the same scale (patch scale) as the other species, but at a landscape (broader) scale they maximised both IDE and DDE. Through this research I have shown how regular fire affects the foraging and energy maximisation behaviour of large African herbivores and how morpho-physiological traits affect these decisions. In response to these results I recommend that the management of Mkambati implement a focused monitoring program comparing the frequently and less frequently burnt areas of the reserve in order to understand the complex effects of anthropogenic fire and its subsequent effects on the biota of Mkambati.
- Full Text:
- Date Issued: 2018
- Authors: Brooke, Christopher
- Date: 2018
- Subjects: Grassland ecology -- South Africa -- Eastern Cape , Animals -- Food -- South Africa -- Eastern Cape , Herbivores -- Ecology -- South Africa -- Eastern Cape , Fire ecology -- South Africa -- Eastern Cape
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/21961 , vital:29807
- Description: Fire and herbivory are both major drivers in grassland ecosystems throughout the world. Although these two driving forces act independently from one another the relationship between fire and herbivory may be more significant than either acting on their own. Heterogeneity within the landscape as a result of fire results in herbivores having to adapt their behaviour in space and time. My research focussed on 1) characterising the fire regime on Mkambati Nature Reserve (hereafter Mkambati) and 2) determining the foraging choices and energy maximisation principles displayed by herbivores in relation to the biomass of vegetation and post fire vegetation age. Fire regimes were characterised between 2007-2016 in the low nutrient coastal grasslands of Mkambati in terms of fire season, seasonality of fire-prone weather conditions, fire return interval (FRI) and influence of poaching-related ignitions. Based on these results I then assessed foraging choices in terms of energy maximisation of four large herbivore species. I explored what energy maximisation strategy was employed, i.e. maximisation of daily digestible energy (DDE) (recently burnt low biomass vegetation) or instantaneous digestible energy (IDE) (older high biomass vegetation), by herbivore species with different morpho-physiological traits. Common reedbuck (Redunca arundinum), red hartebeest (Alcelaphus buselaphus subsp. caama), zebra (Equus quagga) and eland (Tragelaphus oryx subsp. oryx) were fitted with GPS satellite tracking collars, and hourly GPS locations (observed) were taken between 2008 and 2016. Using mixed effects models, I compared observed and an associated set of random locations to determine the energy maximisation strategy employed by each species. Our results indicated that fires were concentrated in winter when monthly fire danger weather (FDI) was highest. The mean FRI at Mkambati was <3 years, but varied according to vegetation type, and whether censoring (for open ended FRIs) was applied to estimate mean FRIs. Poachers, with the intention of attracting ungulates, are an important source of ignition at Mkambati. Accordingly FRIs were shorter (approximately 2 years) in areas within 3 km of likely poacher entry points. Although all fires recorded at Mkambati during the study period were of anthropogenic origin, mean FRI still fell within the natural range reported for interior grasslands in South Africa. Based on these findings, underpinned by the fire regime information, I showed that red hartebeest and zebra maximised DDE inside and outside of fire seasons and frequently foraged in low biomass recently burnt grasslands. Eland generally favoured areas where they could maximise IDE outside of the fire season, however during the fire season they switched strategy to maximise DDE. Reedbuck did not maximise IDE or DDE at the same scale (patch scale) as the other species, but at a landscape (broader) scale they maximised both IDE and DDE. Through this research I have shown how regular fire affects the foraging and energy maximisation behaviour of large African herbivores and how morpho-physiological traits affect these decisions. In response to these results I recommend that the management of Mkambati implement a focused monitoring program comparing the frequently and less frequently burnt areas of the reserve in order to understand the complex effects of anthropogenic fire and its subsequent effects on the biota of Mkambati.
- Full Text:
- Date Issued: 2018
The role of field and garden cultivation for food security under a changing climate: the case of Fairbairn and Ntloko villages, Eastern Cape
- Authors: Brooks, Haydn
- Date: 2018
- Subjects: Climatic changes -- Economic aspects -- Eastern Cape (South Africa) , Climatic changes -- Social aspects -- South Africa , Food -- Economic aspects -- South Africa , Food security -- South Africa -- Eastern Cape
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/58013 , vital:27019
- Description: The world is becoming more complex due to the increasing occurrence of social-ecological change. This is particularly evident in the developing world, especially on the African continent, where existing vulnerabilities (i.e. endemic poverty, weak governance, overpopulation and HIV/AIDS) are being exacerbated by the impact of climate change. Climate change poses a very real threat to millions of Africans, especially those who rely on the natural world for their livelihoods. The increasing variability of climate and rainfall patterns are said to have dire consequences on agricultural production which is the main livelihood activity of rural dwellers across the continent. The impacts of such change and variability include, changes in the frequency and intensity of droughts, flooding and heavy storms, leading to worsening soil conditions, desertification as well as disease and pest out-breaks which will likely result in reduced crop and livestock yields. A reduction in agricultural production will likely have a negative effect on the food security of millions of people. This study was conducted in the Eastern Cape of South Africa, in two rural villages, Fairbairn and Ntloko located in the former Ciskei homeland, with the purpose of exploring the nexus between climate change, cultivation and food security. This study combined social-ecological thinking with that of political ecology to create a robust lens, in which to analyse the complex interactions between humans and the environment. A mixed methods approach was used to gather the data which consisted of a household survey, using a structured questionnaire as well as semi-structured interviews with various respondents. Quantitative data were analysed using Excel and Statistica 13, whilst coding was used for qualitative data. The main aim of the study was to explore the extent and characteristics of cultivation in the two study sites, the role of household food production in food security as well as the challenges that local cultivator’s face with regards to climate change. In recent decades, there has been a decline in rural agricultural production with many fields that were previously cultivated, lying vacant and unused. However, as this study found, cultivation is still important as over 50% of sampled households cultivated a small area within the homestead. This was mainly done to supplement household food expenditure in order to save cash incomes. The results also found that although participants had perceived negative changes in climate and rainfall (amount, onset, duration), it was not considered the most important challenge for own production. Rather, lack of fencing and capital were seen as major hindrances to efficient own production. Understanding the complexity of own production and food security under a changing climate can help form better and more resilient policies and strategies for rural development, in addition to strengthening future livelihoods of rural people in an ever changing world.
- Full Text:
- Date Issued: 2018
- Authors: Brooks, Haydn
- Date: 2018
- Subjects: Climatic changes -- Economic aspects -- Eastern Cape (South Africa) , Climatic changes -- Social aspects -- South Africa , Food -- Economic aspects -- South Africa , Food security -- South Africa -- Eastern Cape
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/58013 , vital:27019
- Description: The world is becoming more complex due to the increasing occurrence of social-ecological change. This is particularly evident in the developing world, especially on the African continent, where existing vulnerabilities (i.e. endemic poverty, weak governance, overpopulation and HIV/AIDS) are being exacerbated by the impact of climate change. Climate change poses a very real threat to millions of Africans, especially those who rely on the natural world for their livelihoods. The increasing variability of climate and rainfall patterns are said to have dire consequences on agricultural production which is the main livelihood activity of rural dwellers across the continent. The impacts of such change and variability include, changes in the frequency and intensity of droughts, flooding and heavy storms, leading to worsening soil conditions, desertification as well as disease and pest out-breaks which will likely result in reduced crop and livestock yields. A reduction in agricultural production will likely have a negative effect on the food security of millions of people. This study was conducted in the Eastern Cape of South Africa, in two rural villages, Fairbairn and Ntloko located in the former Ciskei homeland, with the purpose of exploring the nexus between climate change, cultivation and food security. This study combined social-ecological thinking with that of political ecology to create a robust lens, in which to analyse the complex interactions between humans and the environment. A mixed methods approach was used to gather the data which consisted of a household survey, using a structured questionnaire as well as semi-structured interviews with various respondents. Quantitative data were analysed using Excel and Statistica 13, whilst coding was used for qualitative data. The main aim of the study was to explore the extent and characteristics of cultivation in the two study sites, the role of household food production in food security as well as the challenges that local cultivator’s face with regards to climate change. In recent decades, there has been a decline in rural agricultural production with many fields that were previously cultivated, lying vacant and unused. However, as this study found, cultivation is still important as over 50% of sampled households cultivated a small area within the homestead. This was mainly done to supplement household food expenditure in order to save cash incomes. The results also found that although participants had perceived negative changes in climate and rainfall (amount, onset, duration), it was not considered the most important challenge for own production. Rather, lack of fencing and capital were seen as major hindrances to efficient own production. Understanding the complexity of own production and food security under a changing climate can help form better and more resilient policies and strategies for rural development, in addition to strengthening future livelihoods of rural people in an ever changing world.
- Full Text:
- Date Issued: 2018
The contribution of small-scale fisheries to rural livelihoods and food security : evidence from Hamburg, Eastern Cape Province, South Africa
- Authors: Budaza, Nwabisa
- Date: 2018
- Subjects: Small-scale fisheries -- South Africa -- Eastern Cape Food supply -- South Africa -- Eastern Cape Fishery management -- South Africa -- Eastern Cape
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10353/10338 , vital:35396
- Description: Small-scale fisheries are known to provide food and income to millions of people around the world, but their role and existence is often ignored in development planning. The growing human demand for animal protein has become one of the foremost world challenges for which aquatic organisms have a significant role to play. In South Africa, small-scale fisheries have been recognized since the end of Apartheid, but the extent of the contribution of the sector to rural livelihoods and food security is not well understood. Using data drawn from a sample of 80 fishers in the coastal community of Hamburg, Eastern Cape, this dissertation presents an assessment of the contribution of small-scale fisheries to rural livelihoods, income and food security. The primary data were collected from the fishers using a structured questionnaire and non-probability sampling. The data were analysed with the assistance of descriptive techniques and a few simply statistical tests. The results of the study indicate that fishers in Hamburg catch a wide range of fish, which include wild kob, octopus, spotted grunter, white/black mussel cracker and white steenbras. Fishers in the study area are not solely dependent on small-scale fisheries for their livelihoods, income and food security, but generally supplement their welfare payments with fishing in order to sustain their livelihoods. About 78percent of the surveyed fishers depend on government grants, including old age grants, child support grants and social care grant. In terms of employment, 15percent of the surveyed fishers are casually employed, while 6percent are formally employed on a contract basis. Although they are not only dependent on fishing, nevertheless fishing is an important source of livelihood, income and food security. About 37percent of the fishers harvest marine resources for home consumption, while 7percent harvest solely for income, and 56percent harvest for both home consumption and income. Income generated from fisheries is approximately R935 per month and is used to buy food, electricity, fishing equipment and other household needs. The findings from this research underline the need for interventions such as coordinated institutions, improved infrastructure, improved monitoring and enforcement systems, as well as improved access to permit/fishing rights for sustainable use of marine resources.
- Full Text:
- Date Issued: 2018
- Authors: Budaza, Nwabisa
- Date: 2018
- Subjects: Small-scale fisheries -- South Africa -- Eastern Cape Food supply -- South Africa -- Eastern Cape Fishery management -- South Africa -- Eastern Cape
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10353/10338 , vital:35396
- Description: Small-scale fisheries are known to provide food and income to millions of people around the world, but their role and existence is often ignored in development planning. The growing human demand for animal protein has become one of the foremost world challenges for which aquatic organisms have a significant role to play. In South Africa, small-scale fisheries have been recognized since the end of Apartheid, but the extent of the contribution of the sector to rural livelihoods and food security is not well understood. Using data drawn from a sample of 80 fishers in the coastal community of Hamburg, Eastern Cape, this dissertation presents an assessment of the contribution of small-scale fisheries to rural livelihoods, income and food security. The primary data were collected from the fishers using a structured questionnaire and non-probability sampling. The data were analysed with the assistance of descriptive techniques and a few simply statistical tests. The results of the study indicate that fishers in Hamburg catch a wide range of fish, which include wild kob, octopus, spotted grunter, white/black mussel cracker and white steenbras. Fishers in the study area are not solely dependent on small-scale fisheries for their livelihoods, income and food security, but generally supplement their welfare payments with fishing in order to sustain their livelihoods. About 78percent of the surveyed fishers depend on government grants, including old age grants, child support grants and social care grant. In terms of employment, 15percent of the surveyed fishers are casually employed, while 6percent are formally employed on a contract basis. Although they are not only dependent on fishing, nevertheless fishing is an important source of livelihood, income and food security. About 37percent of the fishers harvest marine resources for home consumption, while 7percent harvest solely for income, and 56percent harvest for both home consumption and income. Income generated from fisheries is approximately R935 per month and is used to buy food, electricity, fishing equipment and other household needs. The findings from this research underline the need for interventions such as coordinated institutions, improved infrastructure, improved monitoring and enforcement systems, as well as improved access to permit/fishing rights for sustainable use of marine resources.
- Full Text:
- Date Issued: 2018
Performance evaluation of an off-grid building integrated photovoltaic system in Alice, Eastern Cape province, South Africa
- Authors: Buma, Carine Lethem
- Date: 2018
- Subjects: Building-integrated photovoltaic systems Buildings -- Energy conservation Performance -- Evaluation
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10353/13227 , vital:39623
- Description: The constant increase in the global demand for energy and the current crisis on global warming and climate change has prompted a dying quest for clean, sustainable and reliable sources of energy. Amongst numerous renewable energy technologies, harnessing energy from the sun is the most viable way of guaranteeing a clean and sustainable supply of energy. Also, photovoltaic energy is one of the ways of using energy from the sun, where sunlight is converted to electricity using photovoltaic panels. Furthermore, the integration of photovoltaic modules into buildings is one of the most elegant innovations of this technology, as it plays the dual role of supplying energy to the building as well as protecting the building from outdoor weather conditions. Moreover, operating off the grid offers the possibility of energy access to locations far off from the grid and individuals willing to gain some degree of energy independence. Evaluating the performance of existing off grid and/or building integrated photovoltaic systems is the key to guaranteeing sustainable development and advancement in the technology. Thus, the aim of this work was to evaluate the performance of an off-grid building integrated photovoltaic system that was installed at the Fort Hare Institute of Technology. This entailed performing an in-depth characterisation of the solar resource at this location, evaluating the performance of the modules under outdoor weather conditions and also evaluating the performance of the balance of system (BOS) components. The system was monitored for a period of nine months (between February and October 2017). A data acquisition system was designed for measuring and recording both electrical system parameters and meteorological parameters affecting the performance of the system. These meteorological parameters include; solar irradiance, ambient temperature, cell temperature, relative humidity, wind speed and direction. A detailed characterisation of the solar resource at this location was carried out. It was observed that the solar declination angle varied from -23.5o on the summer solstice to 23.5o on the winter solstice. Also, the solar altitude angle (at solar noon) which is a complementary angle to the zenith angle varied from 33.7o in June to 80.65o in December. During the summer months, longer day lengths were experienced because the sun traversed the sky over a longer time, rising south of east and setting south of west. Whereas, in the winter months, the path length of the sun was shorter, with the sun rising north of east and setting north of west, hence, shorter day lengths. The solar radiation incident on a 25o north facing solar collector was found to be in three components; beam, diffuse and reflected. The beam component was higher in summer whereas the diffuse component was higher in winter due to an increase in the air mass ratio. However, the total daily average radiation was highest in January (7.12 peak sun hours) and least in June (3.04 peak sun hours). Finally, a comparison between the calculated and measured values of solar radiation showed just a 1.1percent difference over the year with disparities being in the individual months.m The influence of outdoor weather conditions on the performance of the system was also evaluated. Operating temperatures were noticed to have a great impact on the output voltage and power of the PV array. Significant correlations existed between various meteorological parameters. Also, a multiple linear regression model was developed to ascertain the dependence of module temperature on solar irradiance, ambient temperature, relative humidity, wind speed and wind direction. The coefficient of determination for the model was 0.928, showing a strong relationship between cell temperature and the chosen predictors. Also, the six thermocouples installed at various locations of the PV array revealed variations in the operating temperatures of the modules. The modules on the east side of the array recorded relatively lower temperatures because of the ceiling that had been removed beneath one of the modules on this side of the array, which permitted the free flow of air. Furthermore, I-V measurements conducted on various strings of the array revealed so many steps (hotspots), indicative of module (or cell) mismatch on almost all the cell strings.
- Full Text:
- Date Issued: 2018
- Authors: Buma, Carine Lethem
- Date: 2018
- Subjects: Building-integrated photovoltaic systems Buildings -- Energy conservation Performance -- Evaluation
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10353/13227 , vital:39623
- Description: The constant increase in the global demand for energy and the current crisis on global warming and climate change has prompted a dying quest for clean, sustainable and reliable sources of energy. Amongst numerous renewable energy technologies, harnessing energy from the sun is the most viable way of guaranteeing a clean and sustainable supply of energy. Also, photovoltaic energy is one of the ways of using energy from the sun, where sunlight is converted to electricity using photovoltaic panels. Furthermore, the integration of photovoltaic modules into buildings is one of the most elegant innovations of this technology, as it plays the dual role of supplying energy to the building as well as protecting the building from outdoor weather conditions. Moreover, operating off the grid offers the possibility of energy access to locations far off from the grid and individuals willing to gain some degree of energy independence. Evaluating the performance of existing off grid and/or building integrated photovoltaic systems is the key to guaranteeing sustainable development and advancement in the technology. Thus, the aim of this work was to evaluate the performance of an off-grid building integrated photovoltaic system that was installed at the Fort Hare Institute of Technology. This entailed performing an in-depth characterisation of the solar resource at this location, evaluating the performance of the modules under outdoor weather conditions and also evaluating the performance of the balance of system (BOS) components. The system was monitored for a period of nine months (between February and October 2017). A data acquisition system was designed for measuring and recording both electrical system parameters and meteorological parameters affecting the performance of the system. These meteorological parameters include; solar irradiance, ambient temperature, cell temperature, relative humidity, wind speed and direction. A detailed characterisation of the solar resource at this location was carried out. It was observed that the solar declination angle varied from -23.5o on the summer solstice to 23.5o on the winter solstice. Also, the solar altitude angle (at solar noon) which is a complementary angle to the zenith angle varied from 33.7o in June to 80.65o in December. During the summer months, longer day lengths were experienced because the sun traversed the sky over a longer time, rising south of east and setting south of west. Whereas, in the winter months, the path length of the sun was shorter, with the sun rising north of east and setting north of west, hence, shorter day lengths. The solar radiation incident on a 25o north facing solar collector was found to be in three components; beam, diffuse and reflected. The beam component was higher in summer whereas the diffuse component was higher in winter due to an increase in the air mass ratio. However, the total daily average radiation was highest in January (7.12 peak sun hours) and least in June (3.04 peak sun hours). Finally, a comparison between the calculated and measured values of solar radiation showed just a 1.1percent difference over the year with disparities being in the individual months.m The influence of outdoor weather conditions on the performance of the system was also evaluated. Operating temperatures were noticed to have a great impact on the output voltage and power of the PV array. Significant correlations existed between various meteorological parameters. Also, a multiple linear regression model was developed to ascertain the dependence of module temperature on solar irradiance, ambient temperature, relative humidity, wind speed and wind direction. The coefficient of determination for the model was 0.928, showing a strong relationship between cell temperature and the chosen predictors. Also, the six thermocouples installed at various locations of the PV array revealed variations in the operating temperatures of the modules. The modules on the east side of the array recorded relatively lower temperatures because of the ceiling that had been removed beneath one of the modules on this side of the array, which permitted the free flow of air. Furthermore, I-V measurements conducted on various strings of the array revealed so many steps (hotspots), indicative of module (or cell) mismatch on almost all the cell strings.
- Full Text:
- Date Issued: 2018
A mineralogical, geochemical and metallogenic study of unusual Mn/Na/Ba assemblages at the footwall of conglomeratic iron-ore at farm Langverwacht, Northern Cape Province of South Africa
- Authors: Bursey, James Rodney
- Date: 2018
- Subjects: Iron ores -- Geology -- South Africa -- Northern Cape , Conglomerate -- South Africa -- Northern Cape , Petrology -- South Africa -- Northern Cape , Manganese -- South Africa -- Northern Cape , Sodium -- South Africa -- Northern Cape , Barium -- South Africa -- Northern Cape
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/62516 , vital:28201
- Description: The Postmasburg Manganese Field (PMF), located in the Northern Cape province of South Africa, plays host to significant deposits of iron and manganese that have been utilized since their discovery in 1922 by Captain L.T. Shone. Further afield, lies the massive high-grade manganese deposit of the Kalahari Manganese Field (KMF), which drew attention away from the PMF after its discovery. These deposits are not limited to iron and manganese ore, but contain significant assemblages of alkali-rich rocks - which is the focus of this study. The existence of alkali-rich assemblages beneath conglomeratic iron-ore on farm Langwervacht, has come under investigation in this study, and in particular, the enrichment of these rocks in Ba, Na and Mn. Petrographic analysis of the clast-supported conglomerate unit (ore-zone), has uncovered the presence of vugs (up to 8mm across) which contain barite, K-feldspar and fluorapatite. In addition to this, the ore-zone of one of the three boreholes contains late carbonate veins (kutnohorite), which travel along Fe-clast boundaries, and exploit clast-fractures and areas of weakness. Further down, within the ‘enriched-zone’ of alkalis, the mineralogy is more diverse - containing elevated concentrations of Ba, Na and Mn. Seventeen distinct minerals containing these three key elements have been identified - along with one solid-solution series in the form of hollandite-coronadite. The existence of minerals such as natrolite, aegirine, albite, banalsite, barite, serandite, celsian and hollandite-coronadite are indicative of hydrothermal activity having influenced these rocks. Bulk-geochemistry was used to compare the major and trace elements of each borehole and the associated units. Both the trace elements and the REE’s from the ore-zone are enriched by an average of 5-10x relative to the BIF standard used - which immediately suggests an influx of elements. Compared to PAAS (Post Archaean Australian Shales), the ore-zone REE’s are slightly depleted, but more importantly the profiles are very similar to that of the Mapedi shales achieved in previous studies. This result points towards a strong shale influence in the ore-zone protolith. Expectedly, many of the enriched-zone trace elements and REE’s show far greater enrichment than what is observed in the ore-zone. Trace and Rare Earth Element profiles between the ore-zone and the enriched-zone are, however, generally correlative, with profiles reflecting similar enrichments and depletions for a given element - even within different rock units. This suggests that the hydrothermal fluid has moved in a general upward direction, reacting with host-rock units, and relinquishing elements carried in solution - wherever conditions have been favourable for the accommodation of these elements. This study has shed light on the relationship between the ore-zone and the enriched-zone, and results suggest that the process of alkali enrichment is not directly related to the process of upgrading of the iron ores. This is due to the extent of the alkali-enrichment below the ore-zone, as well as enrichment factors in some trace elements being superior to that of Fe2O3 in the ore- zone. Hence, both of these zones have both been affected by a later hydrothermal fluid. The source of the fluid is likely a mature basinal brine, of oxidized, alkaline nature - which leached elements (Ba, K, Na, Pb, Ca) from older rocks, and carried them in solution. On a local-scale, this fluid has exploited areas of weakness in the form of fractures, less consolidated conglomeratic material and crosscutting veins. Manganese and iron has been remobilized on a local scale - producing secondary textures and partitioning into phases such as Mn-rich calcite and serandite. Comparisons to other studies in the PMF and KMF have revealed very similar alkali-rich assemblages, bearing many of the same minerals observed in this study - even within more manganiferous deposits. These findings have led to suggestions of a possible regional-scale hydrothermal overprint, which may have imparted a similar geochemical signal over the entire region - with the assistance of faults and unconformities. Of course, proving this is no mean feat, but current work on the source of barium in barite, using Sr isotopes from samples across the region may shed light on the source of at least one key element of these deposits.
- Full Text:
- Date Issued: 2018
- Authors: Bursey, James Rodney
- Date: 2018
- Subjects: Iron ores -- Geology -- South Africa -- Northern Cape , Conglomerate -- South Africa -- Northern Cape , Petrology -- South Africa -- Northern Cape , Manganese -- South Africa -- Northern Cape , Sodium -- South Africa -- Northern Cape , Barium -- South Africa -- Northern Cape
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/62516 , vital:28201
- Description: The Postmasburg Manganese Field (PMF), located in the Northern Cape province of South Africa, plays host to significant deposits of iron and manganese that have been utilized since their discovery in 1922 by Captain L.T. Shone. Further afield, lies the massive high-grade manganese deposit of the Kalahari Manganese Field (KMF), which drew attention away from the PMF after its discovery. These deposits are not limited to iron and manganese ore, but contain significant assemblages of alkali-rich rocks - which is the focus of this study. The existence of alkali-rich assemblages beneath conglomeratic iron-ore on farm Langwervacht, has come under investigation in this study, and in particular, the enrichment of these rocks in Ba, Na and Mn. Petrographic analysis of the clast-supported conglomerate unit (ore-zone), has uncovered the presence of vugs (up to 8mm across) which contain barite, K-feldspar and fluorapatite. In addition to this, the ore-zone of one of the three boreholes contains late carbonate veins (kutnohorite), which travel along Fe-clast boundaries, and exploit clast-fractures and areas of weakness. Further down, within the ‘enriched-zone’ of alkalis, the mineralogy is more diverse - containing elevated concentrations of Ba, Na and Mn. Seventeen distinct minerals containing these three key elements have been identified - along with one solid-solution series in the form of hollandite-coronadite. The existence of minerals such as natrolite, aegirine, albite, banalsite, barite, serandite, celsian and hollandite-coronadite are indicative of hydrothermal activity having influenced these rocks. Bulk-geochemistry was used to compare the major and trace elements of each borehole and the associated units. Both the trace elements and the REE’s from the ore-zone are enriched by an average of 5-10x relative to the BIF standard used - which immediately suggests an influx of elements. Compared to PAAS (Post Archaean Australian Shales), the ore-zone REE’s are slightly depleted, but more importantly the profiles are very similar to that of the Mapedi shales achieved in previous studies. This result points towards a strong shale influence in the ore-zone protolith. Expectedly, many of the enriched-zone trace elements and REE’s show far greater enrichment than what is observed in the ore-zone. Trace and Rare Earth Element profiles between the ore-zone and the enriched-zone are, however, generally correlative, with profiles reflecting similar enrichments and depletions for a given element - even within different rock units. This suggests that the hydrothermal fluid has moved in a general upward direction, reacting with host-rock units, and relinquishing elements carried in solution - wherever conditions have been favourable for the accommodation of these elements. This study has shed light on the relationship between the ore-zone and the enriched-zone, and results suggest that the process of alkali enrichment is not directly related to the process of upgrading of the iron ores. This is due to the extent of the alkali-enrichment below the ore-zone, as well as enrichment factors in some trace elements being superior to that of Fe2O3 in the ore- zone. Hence, both of these zones have both been affected by a later hydrothermal fluid. The source of the fluid is likely a mature basinal brine, of oxidized, alkaline nature - which leached elements (Ba, K, Na, Pb, Ca) from older rocks, and carried them in solution. On a local-scale, this fluid has exploited areas of weakness in the form of fractures, less consolidated conglomeratic material and crosscutting veins. Manganese and iron has been remobilized on a local scale - producing secondary textures and partitioning into phases such as Mn-rich calcite and serandite. Comparisons to other studies in the PMF and KMF have revealed very similar alkali-rich assemblages, bearing many of the same minerals observed in this study - even within more manganiferous deposits. These findings have led to suggestions of a possible regional-scale hydrothermal overprint, which may have imparted a similar geochemical signal over the entire region - with the assistance of faults and unconformities. Of course, proving this is no mean feat, but current work on the source of barium in barite, using Sr isotopes from samples across the region may shed light on the source of at least one key element of these deposits.
- Full Text:
- Date Issued: 2018