A 5G Communication system based on flexible spectrum technology for the SKA
- Authors: Karembera, Reinhard Siwombe
- Date: 2022-04
- Subjects: Mobile communication systems--Technological innovations , Wireless communication systems -- Standards --South Africa
- Language: English
- Type: Doctoral theses
- Identifier: http://hdl.handle.net/10948/56177 , vital:56013
- Description: Faculty of Science Radio astronomy research is rapidly expanding across the African continent. At the same time, the fifth generation (5G) of mobile communication systems are also being researched and developed. Throughout history, mobile communication networks are known to affect the activities of radio astronomy. If not carefully managed, radio frequencies from mobile communication devices can severely affect radio astronomy observations. To that end, many techniques have been proposed to protect the radio astronomer from RFIs coming from radio communication networks. Some of the proposed techniques such as RFI quite zones and spectrum assignment by regulatory authorities will not be convenient during the implementation of 5G mobile networks. This is because 5G radio communication systems are expected to support spectrum-hungry application such as video-on-demand, augmented realities, high-definition television and so on. To realize this, the 5G networks will be forced to have access to protected radio spectrum, including those at which radio astronomy activities are being researched. To facilitate this, the 5G radio communication networks should have the intelligence to coexist within such protected spectrums without the consequences of radio frequency interferences (RFI) to the primary user. In this thesis, we present novel 5G networks with the intelligence that allow them to coexist within radio astronomy areas without introducing RFIs to the primary user. We proposed a photonic solution, keeping in mind the characteristic requirements for future 5G radio communication networks. The thesis begins by reviewing the current trend of radio astronomy research in Africa. It was found that radio astronomy research in Africa is growing rapidly. Many African countries such as South Africa and Ghana are at advanced stages when it comes to radio astronomy research. Therefore, the finding and proposal of this thesis will be valuable to such countries. In order to develop a radio access network (RAN) that can coexist within radio astronomy areas, the thesis reviewed past and present state-of-the-art RANs. Each access network was analyses for its feasibility to be implemented within radio astronomy areas to realize mobile communication without the consequences of RFIs to the astronomer. It was motivated that the current centralized radio access network (C-RAN) the best solution to be developed for radio communication within radio astronomy areas. This is because the C-RAN architecture is centralized by pooling network resources to a common point. From such pool, network resources can be controlled and shared among 5G network user, including radio astronomers and the surrounding communities. The next chapters reviewed photonic RF transmitters and their associated lasers currently being proposed to be used within C-RANs. , Thesis (PhD) -- Faculty of Science, School of Computer Science, Mathematics, Physics and Statistics, 2022
- Full Text:
- Date Issued: 2022-04
- Authors: Karembera, Reinhard Siwombe
- Date: 2022-04
- Subjects: Mobile communication systems--Technological innovations , Wireless communication systems -- Standards --South Africa
- Language: English
- Type: Doctoral theses
- Identifier: http://hdl.handle.net/10948/56177 , vital:56013
- Description: Faculty of Science Radio astronomy research is rapidly expanding across the African continent. At the same time, the fifth generation (5G) of mobile communication systems are also being researched and developed. Throughout history, mobile communication networks are known to affect the activities of radio astronomy. If not carefully managed, radio frequencies from mobile communication devices can severely affect radio astronomy observations. To that end, many techniques have been proposed to protect the radio astronomer from RFIs coming from radio communication networks. Some of the proposed techniques such as RFI quite zones and spectrum assignment by regulatory authorities will not be convenient during the implementation of 5G mobile networks. This is because 5G radio communication systems are expected to support spectrum-hungry application such as video-on-demand, augmented realities, high-definition television and so on. To realize this, the 5G networks will be forced to have access to protected radio spectrum, including those at which radio astronomy activities are being researched. To facilitate this, the 5G radio communication networks should have the intelligence to coexist within such protected spectrums without the consequences of radio frequency interferences (RFI) to the primary user. In this thesis, we present novel 5G networks with the intelligence that allow them to coexist within radio astronomy areas without introducing RFIs to the primary user. We proposed a photonic solution, keeping in mind the characteristic requirements for future 5G radio communication networks. The thesis begins by reviewing the current trend of radio astronomy research in Africa. It was found that radio astronomy research in Africa is growing rapidly. Many African countries such as South Africa and Ghana are at advanced stages when it comes to radio astronomy research. Therefore, the finding and proposal of this thesis will be valuable to such countries. In order to develop a radio access network (RAN) that can coexist within radio astronomy areas, the thesis reviewed past and present state-of-the-art RANs. Each access network was analyses for its feasibility to be implemented within radio astronomy areas to realize mobile communication without the consequences of RFIs to the astronomer. It was motivated that the current centralized radio access network (C-RAN) the best solution to be developed for radio communication within radio astronomy areas. This is because the C-RAN architecture is centralized by pooling network resources to a common point. From such pool, network resources can be controlled and shared among 5G network user, including radio astronomers and the surrounding communities. The next chapters reviewed photonic RF transmitters and their associated lasers currently being proposed to be used within C-RANs. , Thesis (PhD) -- Faculty of Science, School of Computer Science, Mathematics, Physics and Statistics, 2022
- Full Text:
- Date Issued: 2022-04
A case study assessment of the ecological and social status of the South African boat-based whale watching industry
- Authors: Tolsma, Minke
- Date: 2022-04
- Subjects: Whale watching --South Africa , Dolphin watching
- Language: English
- Type: Doctoral theses , text
- Identifier: http://hdl.handle.net/10948/55887 , vital:54397
- Description: Boat-based whale-watching (BBWW) is a rapidly growing marine tourism industry globally and in South Africa (SA). BBWW in SA was established in 1998, and since then the number of permits available has doubled from 20 to 40. However, the establishment and past growth of the industry was undertaken without ecological research or impact assessments. Global research has shown that BBWW has the potential to cause short-term changes in cetacean behaviour and movement, which in turn can have long-term population-level consequences. National policies to grow ocean economies in SA may encourage excessive growth in the BBWW industry, impacting the ecological sustainability. In the absence of long-term impact data, the BBWW industry should be managed to minimise short-term changes. This study aimed to determine the social and ecological status of the SA BBWW industry, using Plettenberg Bay as a case study, to inform its long term sustainability. To achieve this aim: 1) the short-term behavioural and movement responses of six cetacean species to encounters with commercial BBWW vessels were measured; 2) the efficacy of three permit regulations (approach speed, approach angle, and encounter duration) to prevent short-term behavioural changes in three cetacean species was measured; 3) rates of compliance of BBWWoperators with current regulations were recorded; 4) BBWW tourists’ expectations of and satisfaction with the industry were investigated; as well as 5) operators’ views on the current permit regulations of the industry All research was conducted between September 2018 and November 2020 in Plettenberg Bay (SA) where two BBWW companies operating two vessels each are active. Three dolphin (bottlenose, common and humpback dolphins) and three whale (Bryde’s, humpback and southern right whales) species are targeted by the industry, and were encountered during this study. , Thesis (PhD) -- Faculty of Science, School of Environmental Sciences, 2022
- Full Text:
- Date Issued: 2022-04
- Authors: Tolsma, Minke
- Date: 2022-04
- Subjects: Whale watching --South Africa , Dolphin watching
- Language: English
- Type: Doctoral theses , text
- Identifier: http://hdl.handle.net/10948/55887 , vital:54397
- Description: Boat-based whale-watching (BBWW) is a rapidly growing marine tourism industry globally and in South Africa (SA). BBWW in SA was established in 1998, and since then the number of permits available has doubled from 20 to 40. However, the establishment and past growth of the industry was undertaken without ecological research or impact assessments. Global research has shown that BBWW has the potential to cause short-term changes in cetacean behaviour and movement, which in turn can have long-term population-level consequences. National policies to grow ocean economies in SA may encourage excessive growth in the BBWW industry, impacting the ecological sustainability. In the absence of long-term impact data, the BBWW industry should be managed to minimise short-term changes. This study aimed to determine the social and ecological status of the SA BBWW industry, using Plettenberg Bay as a case study, to inform its long term sustainability. To achieve this aim: 1) the short-term behavioural and movement responses of six cetacean species to encounters with commercial BBWW vessels were measured; 2) the efficacy of three permit regulations (approach speed, approach angle, and encounter duration) to prevent short-term behavioural changes in three cetacean species was measured; 3) rates of compliance of BBWWoperators with current regulations were recorded; 4) BBWW tourists’ expectations of and satisfaction with the industry were investigated; as well as 5) operators’ views on the current permit regulations of the industry All research was conducted between September 2018 and November 2020 in Plettenberg Bay (SA) where two BBWW companies operating two vessels each are active. Three dolphin (bottlenose, common and humpback dolphins) and three whale (Bryde’s, humpback and southern right whales) species are targeted by the industry, and were encountered during this study. , Thesis (PhD) -- Faculty of Science, School of Environmental Sciences, 2022
- Full Text:
- Date Issued: 2022-04
A case study on the incidence and extent of medullated and coloured fibres in the commercially produced South African wool clip 2010 – 2017
- Authors: Zietsman, Jolandrie
- Date: 2022-04
- Subjects: Port Elizabeth (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/55445 , vital:52002
- Description: No formal study on the incidence and extent of medullated and coloured fibres has been performed in South Africa. The purpose of this research project was to investigate the validity of the claims that there has been an increase in the production of wool contaminated with medullated and coloured fibres. Therefore, the main aim of this study was to determine whether the incidence and extent of medullated and coloured fibres in the South African wool clip have changed over time. Secondly, the study aimed to determine whether the incidence and extent of medullated and coloured fibres have a distinct geographic distribution. This study explored eight years of wool production records (2010 to 2017) obtained from BKB, the largest wool broker in South Africa. For the purpose of this research, the wool-producing areas of South Africa were divided into 6 regions, according to average annual rainfall, vegetation type and major farming practices applied in the area. Statistical analysis of the data included descriptive statistics, analysis of variance and post-hoc tests, as well as regression analyses. This study succeeded in quantifying the extent and prevalence of contamination with medullated and coloured fibres in the South African wool clip. The overarching conclusions were: • Floating kemp is the most important contaminant of wool in South Africa, with the incidence of harsh kemp and coloured fibres being very low. • Generally, the most important areas that need attention in combatting contamination in the South African wool clip, are the Mixed Farming Summer Rainfall Region, the Semi-Arid Grassveld and the High Rainfall Grassland. , Thesis (MSc) -- Faculty of Science, School of Environmental Sciences, 2022
- Full Text:
- Date Issued: 2022-04
- Authors: Zietsman, Jolandrie
- Date: 2022-04
- Subjects: Port Elizabeth (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/55445 , vital:52002
- Description: No formal study on the incidence and extent of medullated and coloured fibres has been performed in South Africa. The purpose of this research project was to investigate the validity of the claims that there has been an increase in the production of wool contaminated with medullated and coloured fibres. Therefore, the main aim of this study was to determine whether the incidence and extent of medullated and coloured fibres in the South African wool clip have changed over time. Secondly, the study aimed to determine whether the incidence and extent of medullated and coloured fibres have a distinct geographic distribution. This study explored eight years of wool production records (2010 to 2017) obtained from BKB, the largest wool broker in South Africa. For the purpose of this research, the wool-producing areas of South Africa were divided into 6 regions, according to average annual rainfall, vegetation type and major farming practices applied in the area. Statistical analysis of the data included descriptive statistics, analysis of variance and post-hoc tests, as well as regression analyses. This study succeeded in quantifying the extent and prevalence of contamination with medullated and coloured fibres in the South African wool clip. The overarching conclusions were: • Floating kemp is the most important contaminant of wool in South Africa, with the incidence of harsh kemp and coloured fibres being very low. • Generally, the most important areas that need attention in combatting contamination in the South African wool clip, are the Mixed Farming Summer Rainfall Region, the Semi-Arid Grassveld and the High Rainfall Grassland. , Thesis (MSc) -- Faculty of Science, School of Environmental Sciences, 2022
- Full Text:
- Date Issued: 2022-04
An evolutionary algorithm approach to ecological optimal control problems
- Authors: Westcott, Amy-Rose
- Date: 2022-04
- Subjects: Mathematical optimization -- South africa , Evolutionary programming (Computer science)
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/55544 , vital:52812
- Description: There are several challenges associated with applying conventional (hereafter classic) optimal control (OC) methods to ecological optimal control problems (OCPs). Conditions required by these methods, including differentiability and convexity, for example, are not always met, and ecological problems do not always adhere to solvable OCP formulations. Moreover, mathematically optimal solutions do not always translate to optimal ecological strategies in practice. Despite this, alternative OC approaches are relatively under-explored. Evolutionary algorithms (EAs) circumvent many of the complex aspects of classic OC methods and have been successfully applied to diverse OCPs. Nevertheless, EAs have sel dom been applied to ecological OCPs. The viability of an EA approach to ecological OCPs was therefore investigated in the current study, facilitated by four case studies of increasing complexity and a genetic algorithm (GA) as a representative EA approach. To ascertain the accuracy of a GA approach, comparisons between a GA and classic OC methods were conducted in the first three case studies. The GA generated near-optima in these comparisons, comparable to the corresponding classical solutions, whilst avoiding non-trivial mathematical theory. Supported by these results, an unconventional OCP, that arguably cannot be solved using classic OC methods, was formulated in the fourth case study, and solved using a GA approach. The resulting solution was feasible and further conformed with strategies found to be successful in practice. Additionally, the GA approach was rela tively simple to apply in all case studies. These collective outcomes of demonstrated the viability of a GA as an OC method in eco logical OCPs, thereby supporting the use of an EA approach as an alternative to classic OC methods in ecological OCPs. The feasibility of an EA approach to atypical OCPs was further demonstrated, which may act to increase realism in OC applications. Further investigation in this regard is thus warranted by this study. , Thesis (MS) -- Faculty of Science, Mathematics and Applied Mathematics, 2022
- Full Text:
- Date Issued: 2022-04
- Authors: Westcott, Amy-Rose
- Date: 2022-04
- Subjects: Mathematical optimization -- South africa , Evolutionary programming (Computer science)
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/55544 , vital:52812
- Description: There are several challenges associated with applying conventional (hereafter classic) optimal control (OC) methods to ecological optimal control problems (OCPs). Conditions required by these methods, including differentiability and convexity, for example, are not always met, and ecological problems do not always adhere to solvable OCP formulations. Moreover, mathematically optimal solutions do not always translate to optimal ecological strategies in practice. Despite this, alternative OC approaches are relatively under-explored. Evolutionary algorithms (EAs) circumvent many of the complex aspects of classic OC methods and have been successfully applied to diverse OCPs. Nevertheless, EAs have sel dom been applied to ecological OCPs. The viability of an EA approach to ecological OCPs was therefore investigated in the current study, facilitated by four case studies of increasing complexity and a genetic algorithm (GA) as a representative EA approach. To ascertain the accuracy of a GA approach, comparisons between a GA and classic OC methods were conducted in the first three case studies. The GA generated near-optima in these comparisons, comparable to the corresponding classical solutions, whilst avoiding non-trivial mathematical theory. Supported by these results, an unconventional OCP, that arguably cannot be solved using classic OC methods, was formulated in the fourth case study, and solved using a GA approach. The resulting solution was feasible and further conformed with strategies found to be successful in practice. Additionally, the GA approach was rela tively simple to apply in all case studies. These collective outcomes of demonstrated the viability of a GA as an OC method in eco logical OCPs, thereby supporting the use of an EA approach as an alternative to classic OC methods in ecological OCPs. The feasibility of an EA approach to atypical OCPs was further demonstrated, which may act to increase realism in OC applications. Further investigation in this regard is thus warranted by this study. , Thesis (MS) -- Faculty of Science, Mathematics and Applied Mathematics, 2022
- Full Text:
- Date Issued: 2022-04
Bootstrap-based tolerance intervals for nested two-way random effects models
- Authors: Erasmus, Christopher Daniel
- Date: 2022-04
- Subjects: Mathematical statistics-South Africa , Multilevel models
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/55573 , vital:53331
- Description: Variance component, or random effects, models are frequently used by manufacturers to model the variance present in a manufacturing process. By applying tolerance intervals to variance component models, manufacturers are able to set upper and lower limits to monitor the variance within a process. Existing methods for constructing tolerance intervals are constrained by the necessity for data to be normally distributed. Recently, non-parametric bootstrap-based methods were developed by Deyzel (2018) to obtain α-expectation and (α, β) two-sided tolerance intervals for the two-way nested random effects model. Classical and non-parametric methods for obtaining tolerance intervals for the one way random effects model have been assessed in accordance with Rebafka et al. (2007). The present study assesses and compares classical, Bayesian and non-parametric methods for obtaining tolerance intervals for the two-way nested random effects model under different assumptions of the underlying distribution. Results show that the non-parametric methods provided relatively narrow intervals, and generally retain the nominal content and guarantee levels, regardless of the underlying distribution , Thesis (MSc) -- Faculty of Science, Mathematical Statistics , 2022
- Full Text:
- Date Issued: 2022-04
- Authors: Erasmus, Christopher Daniel
- Date: 2022-04
- Subjects: Mathematical statistics-South Africa , Multilevel models
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/55573 , vital:53331
- Description: Variance component, or random effects, models are frequently used by manufacturers to model the variance present in a manufacturing process. By applying tolerance intervals to variance component models, manufacturers are able to set upper and lower limits to monitor the variance within a process. Existing methods for constructing tolerance intervals are constrained by the necessity for data to be normally distributed. Recently, non-parametric bootstrap-based methods were developed by Deyzel (2018) to obtain α-expectation and (α, β) two-sided tolerance intervals for the two-way nested random effects model. Classical and non-parametric methods for obtaining tolerance intervals for the one way random effects model have been assessed in accordance with Rebafka et al. (2007). The present study assesses and compares classical, Bayesian and non-parametric methods for obtaining tolerance intervals for the two-way nested random effects model under different assumptions of the underlying distribution. Results show that the non-parametric methods provided relatively narrow intervals, and generally retain the nominal content and guarantee levels, regardless of the underlying distribution , Thesis (MSc) -- Faculty of Science, Mathematical Statistics , 2022
- Full Text:
- Date Issued: 2022-04
Cannabidiol: extraction and purification using flow Chemistry
- Authors: Bopape, Karabo
- Date: 2022-04
- Subjects: Supercritical fluid extraction -- South Africa , Cannabis -- Therapeutic use
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/55723 , vital:53410
- Description: cannabinoids are of growing interest in research and pharmaceutical applications. Cannabidiol, which is a non-psychoactive cannabinoid, has many pharmaceutical applications. The current and main source of cannabidiol and other cannabinoids is from cannabis and hemp extractions. Current extraction methods involve the use of conventional solvent extraction, which employs the use of organic solvents, in some cases along with mechanical assistance from various equipment. Alternatively, another widely used extraction method is the use of supercritical extraction fluids (SC-CO2 being the most common). An alternative method, which uses chemical synthesis to derivatize cannabidiol to form an intermediate, which is crystalline and can easily be isolated from the extract; the crystalline intermediate can then be deprotected back to pure cannabidiol. In this research, we investigated and adapted the crystallisation method (originally employed by Adams) into continuous flow. In this research, hemp extracts and oilsrich in CBD were used as the source for cannabidiol. This synthesis was adapted into microreactors to synthesise the crystalline intermediate ester product (cannabidiol-3,5-bis-benzoate) which was subsequently reacted in a saponification ester hydrolysis to convert back and isolate pure CBD using continuous flow microreactor technology. Chapter one gives a comprehensive literature review and background on cannabidiol, along with its chemistry and pharmacological benefits in addition to a brief introduction to continuous flow technology with its advantages. Chapter two details the experimental procedures utilised for both batch and continuous flow syntheses. The continuous flow synthesis and subsequent hydrolysis of the ester intermediate, which shows the improvements in comparison to batch; giving higher product recovery (63% CBD), in shorter reaction times (2.5 min for CBD bis-benzoate; 30 min for CBD) is subsequently presented. This is expanded in chapter three with detailed discussions of the results attained during the continuous flow. The concluding remarks, the impact of this study and future work are elucidated in chapter four. , Thesis (MSc) -- Faculty of Science, Biomolecular and Chemical Sciences, 2022
- Full Text:
- Date Issued: 2022-04
- Authors: Bopape, Karabo
- Date: 2022-04
- Subjects: Supercritical fluid extraction -- South Africa , Cannabis -- Therapeutic use
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/55723 , vital:53410
- Description: cannabinoids are of growing interest in research and pharmaceutical applications. Cannabidiol, which is a non-psychoactive cannabinoid, has many pharmaceutical applications. The current and main source of cannabidiol and other cannabinoids is from cannabis and hemp extractions. Current extraction methods involve the use of conventional solvent extraction, which employs the use of organic solvents, in some cases along with mechanical assistance from various equipment. Alternatively, another widely used extraction method is the use of supercritical extraction fluids (SC-CO2 being the most common). An alternative method, which uses chemical synthesis to derivatize cannabidiol to form an intermediate, which is crystalline and can easily be isolated from the extract; the crystalline intermediate can then be deprotected back to pure cannabidiol. In this research, we investigated and adapted the crystallisation method (originally employed by Adams) into continuous flow. In this research, hemp extracts and oilsrich in CBD were used as the source for cannabidiol. This synthesis was adapted into microreactors to synthesise the crystalline intermediate ester product (cannabidiol-3,5-bis-benzoate) which was subsequently reacted in a saponification ester hydrolysis to convert back and isolate pure CBD using continuous flow microreactor technology. Chapter one gives a comprehensive literature review and background on cannabidiol, along with its chemistry and pharmacological benefits in addition to a brief introduction to continuous flow technology with its advantages. Chapter two details the experimental procedures utilised for both batch and continuous flow syntheses. The continuous flow synthesis and subsequent hydrolysis of the ester intermediate, which shows the improvements in comparison to batch; giving higher product recovery (63% CBD), in shorter reaction times (2.5 min for CBD bis-benzoate; 30 min for CBD) is subsequently presented. This is expanded in chapter three with detailed discussions of the results attained during the continuous flow. The concluding remarks, the impact of this study and future work are elucidated in chapter four. , Thesis (MSc) -- Faculty of Science, Biomolecular and Chemical Sciences, 2022
- Full Text:
- Date Issued: 2022-04
Cape Vultures (Gyps coprotheres) and the threat of wind farms: a race to extinction?
- Authors: Brooke, Francis Rae
- Date: 2022-04
- Subjects: Wind Turbines --Blades --Materials , Gyps --South Africa
- Language: English
- Type: Doctoral theses , text
- Identifier: http://hdl.handle.net/10948/55910 , vital:54399
- Description: The development of wind energy is increasing globally and is often considered more environmentally friendly when compared to fossil fuel technologies. However, one of the ecological drawbacks of wind energy are the collisions of wildlife with turbine blades. In addition, the resulting anthropogenic landscape transformation can negatively impact populations. The Cape Vulture (Gyps coprotheres), a large endangered southern African endemic species, thus may be at risk from turbine development. The species has decreased dramatically in the past 50 years and understanding how additional mortalities from wind turbine impacts affect the population is needed to ensure effective conservation efforts. This study aimed to determine the population response to this emerging threat. This study first reviewed the species-, site- and wind farm- specific traits that make Gyps species vulnerable to collision with wind energy infrastructure. It examined the monitoring practices employed during the pre- and post-construction phase and mitigation measures in South Africa and compared it with international standards. Furthermore, wind energy development may disrupt landscape connectivity and understanding which, and how habitat patches are used is needed. Using network theory combined with telemetry data from tagged individuals across three age classes, habitat patch use was identified. Further, environmental variables associated with identified habitat patches were identified. Additionally, considering the wind energy industry is expanding in South Africa, exploring how the Cape Vulture population will respond to this novel and emerging threat may aid future conservation management plans. Therefore, using a population viability analysis approach, the study explored how present and future wind turbine mortality scenarios impact the Cape Vulture population and how the population will respond to increased wind turbine development. , Thesis (PhD) -- Faculty of Science, School of Environmental Sciences, 2022
- Full Text:
- Date Issued: 2022-04
- Authors: Brooke, Francis Rae
- Date: 2022-04
- Subjects: Wind Turbines --Blades --Materials , Gyps --South Africa
- Language: English
- Type: Doctoral theses , text
- Identifier: http://hdl.handle.net/10948/55910 , vital:54399
- Description: The development of wind energy is increasing globally and is often considered more environmentally friendly when compared to fossil fuel technologies. However, one of the ecological drawbacks of wind energy are the collisions of wildlife with turbine blades. In addition, the resulting anthropogenic landscape transformation can negatively impact populations. The Cape Vulture (Gyps coprotheres), a large endangered southern African endemic species, thus may be at risk from turbine development. The species has decreased dramatically in the past 50 years and understanding how additional mortalities from wind turbine impacts affect the population is needed to ensure effective conservation efforts. This study aimed to determine the population response to this emerging threat. This study first reviewed the species-, site- and wind farm- specific traits that make Gyps species vulnerable to collision with wind energy infrastructure. It examined the monitoring practices employed during the pre- and post-construction phase and mitigation measures in South Africa and compared it with international standards. Furthermore, wind energy development may disrupt landscape connectivity and understanding which, and how habitat patches are used is needed. Using network theory combined with telemetry data from tagged individuals across three age classes, habitat patch use was identified. Further, environmental variables associated with identified habitat patches were identified. Additionally, considering the wind energy industry is expanding in South Africa, exploring how the Cape Vulture population will respond to this novel and emerging threat may aid future conservation management plans. Therefore, using a population viability analysis approach, the study explored how present and future wind turbine mortality scenarios impact the Cape Vulture population and how the population will respond to increased wind turbine development. , Thesis (PhD) -- Faculty of Science, School of Environmental Sciences, 2022
- Full Text:
- Date Issued: 2022-04
Chemical analysis of selected Eastern Cape medicinal plants
- Authors: Mahanjana, Lungelwa
- Date: 2022-04
- Subjects: Medicinal plants -- South Africa --Eastern Cape , Traditional medicine --South Africa -- Eastern Cape Maps
- Language: English
- Type: Doctoral theses , text
- Identifier: http://hdl.handle.net/10948/55976 , vital:54560
- Description: In the rural parts of the Eastern Cape Province of South Africa, the use of medicinal plants to treat or manage diseases, including those associated with diabetes and HIV, is a common practice. However, the phytochemistry, safety and efficacy of these medicinal plants remain less investigated. Based on available traditional medicinal knowledge (through traditional healers, university library resources, ethnobotanical and science journals and other internet resources), traditional uses and availability, three plant species, namely Bulbine latifolia L. Wild, Dicerothamnus rhinocerotis Koek. and Olea europaea subsp. africana (Mill.) P.S. Green were selected and investigated for their hytoconstituents and biological effects. Phytochemical screening of the three medicinal plants was carried out quantitatively and qualitatively using spectrophotometric methods. Chemical profiling of the crude methanol extracts of all the plant species was successfully done by high-performance thin layer chromatography (HPTLC) and tentative identification of the secondary metabolites was achieved by liquid chromatography–mass spectrometry (LCMS). Cytotoxicity effect investigations on the crude extracts of the three species was done using the 3-[4,5- dimethylthiazole-2-yl]-2,5- hiphenyltetrazolium bromide (MTT) assay against HeLa cervical cancer cells. Isolation and purification of single compounds was done using chromatographic techniques (column chromatography (CC), and preparative thin-layer chromatography (PTLC)). Characterisation of single compounds was achieved using spectroscopic techniques such as Nuclear Magnetic Resonance (NMR), High Resolution Mass Spectrometry (HRMS), Ultra Violet Spectroscopy (UV-vis), Fourier-Transformed Infra-Red Spectroscopy (FTIR) and Single-Crystal X-ray Diffraction (XRD). For the first time from the methanol crude extract of the tubers of B. latifolia, the crystal structure of the phenylanthraquinone, knipholone (3.12) (1-(3-acetyl-2,6- dihydroxy-4- methoxyphenyl)-4,5-dihydroxy-2-methylanthraquinone), was isolated and elucidated along with its derivatives, isoknipholone (3.14), knipholone-6’-methyl (3.27). Moreover, two new compounds, (M)-8-O-β-D-glucopyranosyl-10’-α-L-rhamnopyranosyl-1,1',8',10'-tetrahydroxy 3,3'-dimethyl-[10,7'-bianthracene]-4,9,9'(10'H)-trione (3.23a) and (P)- 8-O-β-D glucopyranosyl-10’-α-L-rhamnopyranosyl-1,1',8',10'-tetrahydroxy-3,3'-dimethyl-[10,7'- bianthracene]-4,9,9'(10'H)-trione (3.23b) were isolated. , Thesis (PhD) -- Faculty of Science, School of Biomecular and Chemical Sciences, 2022
- Full Text:
- Date Issued: 2022-04
- Authors: Mahanjana, Lungelwa
- Date: 2022-04
- Subjects: Medicinal plants -- South Africa --Eastern Cape , Traditional medicine --South Africa -- Eastern Cape Maps
- Language: English
- Type: Doctoral theses , text
- Identifier: http://hdl.handle.net/10948/55976 , vital:54560
- Description: In the rural parts of the Eastern Cape Province of South Africa, the use of medicinal plants to treat or manage diseases, including those associated with diabetes and HIV, is a common practice. However, the phytochemistry, safety and efficacy of these medicinal plants remain less investigated. Based on available traditional medicinal knowledge (through traditional healers, university library resources, ethnobotanical and science journals and other internet resources), traditional uses and availability, three plant species, namely Bulbine latifolia L. Wild, Dicerothamnus rhinocerotis Koek. and Olea europaea subsp. africana (Mill.) P.S. Green were selected and investigated for their hytoconstituents and biological effects. Phytochemical screening of the three medicinal plants was carried out quantitatively and qualitatively using spectrophotometric methods. Chemical profiling of the crude methanol extracts of all the plant species was successfully done by high-performance thin layer chromatography (HPTLC) and tentative identification of the secondary metabolites was achieved by liquid chromatography–mass spectrometry (LCMS). Cytotoxicity effect investigations on the crude extracts of the three species was done using the 3-[4,5- dimethylthiazole-2-yl]-2,5- hiphenyltetrazolium bromide (MTT) assay against HeLa cervical cancer cells. Isolation and purification of single compounds was done using chromatographic techniques (column chromatography (CC), and preparative thin-layer chromatography (PTLC)). Characterisation of single compounds was achieved using spectroscopic techniques such as Nuclear Magnetic Resonance (NMR), High Resolution Mass Spectrometry (HRMS), Ultra Violet Spectroscopy (UV-vis), Fourier-Transformed Infra-Red Spectroscopy (FTIR) and Single-Crystal X-ray Diffraction (XRD). For the first time from the methanol crude extract of the tubers of B. latifolia, the crystal structure of the phenylanthraquinone, knipholone (3.12) (1-(3-acetyl-2,6- dihydroxy-4- methoxyphenyl)-4,5-dihydroxy-2-methylanthraquinone), was isolated and elucidated along with its derivatives, isoknipholone (3.14), knipholone-6’-methyl (3.27). Moreover, two new compounds, (M)-8-O-β-D-glucopyranosyl-10’-α-L-rhamnopyranosyl-1,1',8',10'-tetrahydroxy 3,3'-dimethyl-[10,7'-bianthracene]-4,9,9'(10'H)-trione (3.23a) and (P)- 8-O-β-D glucopyranosyl-10’-α-L-rhamnopyranosyl-1,1',8',10'-tetrahydroxy-3,3'-dimethyl-[10,7'- bianthracene]-4,9,9'(10'H)-trione (3.23b) were isolated. , Thesis (PhD) -- Faculty of Science, School of Biomecular and Chemical Sciences, 2022
- Full Text:
- Date Issued: 2022-04
Classification and clustering based methods for outlier detection of solar resource data
- Authors: Abrahams, Waldo
- Date: 2022-04
- Subjects: Port Elizabeth (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/55423 , vital:51996
- Description: Almost 90% of the primary global energy demand is serviced from the burning of fossil fuels (Abas, Kalair & Khan, 2015). Owing to the detrimental environmental impact of this, a global energy transition to the use of renewable energy, including solar energy, is needed (Gielen et al., 2019). An important aspect that inhibits the growth of solar energy is accurate solar resource data. Such data is needed because knowledge of the future reliability and quality of energy production is required to analyse a system’s performance and determine financial implications (Sengupta et al., 2017). Existing methods used to detect outliers in solar resource data do not efficiently identify outliers and an accurate and robust approach is required (Eastwood, 2019). Using simulated and real-world data, this study investigates the use of several classification methods, along with a two-stage clustering-classification approach to accurately identify outliers in solar resource data. The Treebag method proves to be an adequate outlier detection method for solar resource data. , Thesis (MSc) -- Faculty of Science, School of Computer Science, Mathematics, Physics and Statistics, 2022
- Full Text:
- Date Issued: 2022-04
- Authors: Abrahams, Waldo
- Date: 2022-04
- Subjects: Port Elizabeth (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/55423 , vital:51996
- Description: Almost 90% of the primary global energy demand is serviced from the burning of fossil fuels (Abas, Kalair & Khan, 2015). Owing to the detrimental environmental impact of this, a global energy transition to the use of renewable energy, including solar energy, is needed (Gielen et al., 2019). An important aspect that inhibits the growth of solar energy is accurate solar resource data. Such data is needed because knowledge of the future reliability and quality of energy production is required to analyse a system’s performance and determine financial implications (Sengupta et al., 2017). Existing methods used to detect outliers in solar resource data do not efficiently identify outliers and an accurate and robust approach is required (Eastwood, 2019). Using simulated and real-world data, this study investigates the use of several classification methods, along with a two-stage clustering-classification approach to accurately identify outliers in solar resource data. The Treebag method proves to be an adequate outlier detection method for solar resource data. , Thesis (MSc) -- Faculty of Science, School of Computer Science, Mathematics, Physics and Statistics, 2022
- Full Text:
- Date Issued: 2022-04
Developing a socio- ecological framework for the restoration of estuaries using the Swartkops Estuary as a case study
- Authors: Tsipa, Vusumzi
- Date: 2022-04
- Subjects: Estuarine ecology -- South Africa -- Swartkops River Estuary , Ecosystem
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/59622 , vital:62208
- Description: The aim of this study was to develop and test a socio-ecological systems framework for the restoration of estuaries in South Africa using the Swartkops Estuary as a case study. This necessitated a review of existing SES frameworks that have been developed for use in other disciplines. As part of the newly developed framework, the Swartkops estuary condition was assessed using the Estuary Health Index to understand the present ecological state (PES) of the estuary following from the last assessment done in 2013/2014. The Estuary Health Index is a nationally accepted method of measuring the health of South African estuaries. The state of the societal system was assessed through field observations, engagements with estuary users on-site, insights provided by the Zwartkops Conservancy, and from recent literature. The potential for restoration of habitats for the purpose of carbon storage was also assessed as part of this study. The suitability of disturbed habitats for stimulating future salt marsh growth was investigated since an important incentive for restoration is blue carbon storage. This is important as blue carbon ecosystems offer great potential as a climate change mitigation measure through their ability to sequester carbon. This was done by evaluating plant cover and sediment characteristics at sites along the length of the estuary representing disturbed and undisturbed areas. The estuarine health score for the Swartkops Estuary was found to be 47 out of 100 translating to a PES Category D (largely modified estuary). The main problem in the estuary is water quality along with habitat loss and resource exploitation. The three Wastewater Treatment Works (WWTWs) located upstream of the estuary are the main drivers behind the decline in estuary health in addition to other threats to the water quality which are stormwater run-off inputs from the Motherwell canal and Markman canal. This study showed that the health of the estuary is on a negative trajectory towards a largely degraded estuary. Fishing, bait collection and the use of spiritual sites are the dominant vii ecosystem services used at the estuary. Through the assessment of the state of the societal system, the estuary was highlighted to be a major food source for many people living close to the estuary through subsistence fishing and bait collection for selling to recreational fishers. The estuary is also a health hazard to the very same people that depend on it for survival because of the poor water quality particularly high metal inputs from past and present nearby industrial activities. Restoration plans need to be developed in consideration of the estuary status quo that includes the societal system and the ecosystem services provided by the estuary. , Thesis (MSc) -- Faculty of Science, School of Environmental Sciences, 2022
- Full Text:
- Date Issued: 2022-04
- Authors: Tsipa, Vusumzi
- Date: 2022-04
- Subjects: Estuarine ecology -- South Africa -- Swartkops River Estuary , Ecosystem
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/59622 , vital:62208
- Description: The aim of this study was to develop and test a socio-ecological systems framework for the restoration of estuaries in South Africa using the Swartkops Estuary as a case study. This necessitated a review of existing SES frameworks that have been developed for use in other disciplines. As part of the newly developed framework, the Swartkops estuary condition was assessed using the Estuary Health Index to understand the present ecological state (PES) of the estuary following from the last assessment done in 2013/2014. The Estuary Health Index is a nationally accepted method of measuring the health of South African estuaries. The state of the societal system was assessed through field observations, engagements with estuary users on-site, insights provided by the Zwartkops Conservancy, and from recent literature. The potential for restoration of habitats for the purpose of carbon storage was also assessed as part of this study. The suitability of disturbed habitats for stimulating future salt marsh growth was investigated since an important incentive for restoration is blue carbon storage. This is important as blue carbon ecosystems offer great potential as a climate change mitigation measure through their ability to sequester carbon. This was done by evaluating plant cover and sediment characteristics at sites along the length of the estuary representing disturbed and undisturbed areas. The estuarine health score for the Swartkops Estuary was found to be 47 out of 100 translating to a PES Category D (largely modified estuary). The main problem in the estuary is water quality along with habitat loss and resource exploitation. The three Wastewater Treatment Works (WWTWs) located upstream of the estuary are the main drivers behind the decline in estuary health in addition to other threats to the water quality which are stormwater run-off inputs from the Motherwell canal and Markman canal. This study showed that the health of the estuary is on a negative trajectory towards a largely degraded estuary. Fishing, bait collection and the use of spiritual sites are the dominant vii ecosystem services used at the estuary. Through the assessment of the state of the societal system, the estuary was highlighted to be a major food source for many people living close to the estuary through subsistence fishing and bait collection for selling to recreational fishers. The estuary is also a health hazard to the very same people that depend on it for survival because of the poor water quality particularly high metal inputs from past and present nearby industrial activities. Restoration plans need to be developed in consideration of the estuary status quo that includes the societal system and the ecosystem services provided by the estuary. , Thesis (MSc) -- Faculty of Science, School of Environmental Sciences, 2022
- Full Text:
- Date Issued: 2022-04
Effect of fire severity on Afrotemperate forest tree survival
- Authors: Giddey, Brandon Louis
- Date: 2022-04
- Subjects: Port Elizabeth (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/55385 , vital:51988
- Description: Weather patterns have changed globally with increased fire danger weather conditions, along with poor management and fire suppression, likely contributing to the increase in prevalence of large wildfires. Ecosystems such as temperate broadleaved forests, where fire is limited by climatic conditions, are particularly at risk of altered fire regimes related to climate change. It is thus important to monitor the effects of fire in these ecosystems. Satellite remote sensing is a cost-effective way to assess spatial variability of fire effects on a landscape scale and has become an increasingly used tool for studying fire severity. In the southern Cape of South Africa during October-November 2018, a large wildfire burnt patches of Southern Cape Afrotemperate Forest (hereafter ‘Afrotemperate forest’). This provided an opportunity to investigate the accuracy of a satellite index for fire severity and the effect of fire on Afrotemperate forest survival. The first objective was to verify through field observations the accuracy of the differenced Normalised Burn Ratio (dNBR) as an index of fire severity derived from Sentinel 2 images in Afrotemperate forest. The second objective was to investigate the effect of fire severity and tree size on the post-fire survival of Afrotemperate forest tree species. For the first objective, stem fire severity, estimated from observed damage to the main stem, was recorded for 1 648 trees in 87 plots and linear regression used to test whether the observed measure of fire severity was related to dNBR. For the second objective, stem fire severity and tree survival 19-24 months post-fire were recorded for 40 species and 1 378 trees in 88 plots. Trees were considered to have survived if they resprouted from the main stem or had green foliage in the canopy. The survival response was assessed in relation to stem fire severity and tree size for all trees collectively and for 10 species (with sample size > 40) individually, using logistic regression. A strong linear relationship between dNBR and stem fire severity (r2 = 0.69, p < 0.001) confirmed the accuracy of dNBR as a measure of fire severity in Afrotemperate forest. In the fire investigated, 4 628 ha of Afrotemperate forest burnt of which 67% burnt at low severity, 21% at medium severity and 12% at high severity. The dNBR values associated with fire severity categories were comparable between Afrotemperate and North American forests, suggesting that dNBR values are relatively standard across forest types. Information on the distribution of fire severity facilitates investigation of further questions regarding past and future fire regimes and the fire ecology of Afrotemperate forest. The post-fire survival rate of Afrotemperate forest trees was 45% which is comparable to that in coniferous forests of North America but lower than that in temperate forests of Australia and Portugal and the neighbouring dune thicket which shares several species with Afrotemperate forest. Fire severity had a significant negative effect on survival and tree size a significant positive effect. Total variance explained by the model (for species collectively) was 40.8%, of which fire severity and tree size combined explained 13.2%, and species as random factor, 27.6%. Respective tree species showed differential survival responses – four species showed high survival (> 60% of individuals), while five species showed low survival (< 40%). This study was the first post-fire assessment of the resprouting ability of Afrotemperate forest trees and a third of the trees surveyed (for species collectively) resprouted from the stem. This suggested that resprouting from the stem is a primary means of post-fire recovery in Afrotemperate forest trees, in contrast with previous assertions that several common canopy species, including Podocarpus latifolius, Afrocarpus falcatus, Scutia myrtina, Scolopia mundii and Rapanea melanophloeos, are unable to resprout. Varying resilience to fire among species supports previous suggestions that fire affects species’ composition and diversity in these forests and calls for careful management of fire regimes in the face of global change. , Thesis (MSc) -- Faculty of Science, School of Natural Resource Management, 2022
- Full Text: false
- Date Issued: 2022-04
- Authors: Giddey, Brandon Louis
- Date: 2022-04
- Subjects: Port Elizabeth (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/55385 , vital:51988
- Description: Weather patterns have changed globally with increased fire danger weather conditions, along with poor management and fire suppression, likely contributing to the increase in prevalence of large wildfires. Ecosystems such as temperate broadleaved forests, where fire is limited by climatic conditions, are particularly at risk of altered fire regimes related to climate change. It is thus important to monitor the effects of fire in these ecosystems. Satellite remote sensing is a cost-effective way to assess spatial variability of fire effects on a landscape scale and has become an increasingly used tool for studying fire severity. In the southern Cape of South Africa during October-November 2018, a large wildfire burnt patches of Southern Cape Afrotemperate Forest (hereafter ‘Afrotemperate forest’). This provided an opportunity to investigate the accuracy of a satellite index for fire severity and the effect of fire on Afrotemperate forest survival. The first objective was to verify through field observations the accuracy of the differenced Normalised Burn Ratio (dNBR) as an index of fire severity derived from Sentinel 2 images in Afrotemperate forest. The second objective was to investigate the effect of fire severity and tree size on the post-fire survival of Afrotemperate forest tree species. For the first objective, stem fire severity, estimated from observed damage to the main stem, was recorded for 1 648 trees in 87 plots and linear regression used to test whether the observed measure of fire severity was related to dNBR. For the second objective, stem fire severity and tree survival 19-24 months post-fire were recorded for 40 species and 1 378 trees in 88 plots. Trees were considered to have survived if they resprouted from the main stem or had green foliage in the canopy. The survival response was assessed in relation to stem fire severity and tree size for all trees collectively and for 10 species (with sample size > 40) individually, using logistic regression. A strong linear relationship between dNBR and stem fire severity (r2 = 0.69, p < 0.001) confirmed the accuracy of dNBR as a measure of fire severity in Afrotemperate forest. In the fire investigated, 4 628 ha of Afrotemperate forest burnt of which 67% burnt at low severity, 21% at medium severity and 12% at high severity. The dNBR values associated with fire severity categories were comparable between Afrotemperate and North American forests, suggesting that dNBR values are relatively standard across forest types. Information on the distribution of fire severity facilitates investigation of further questions regarding past and future fire regimes and the fire ecology of Afrotemperate forest. The post-fire survival rate of Afrotemperate forest trees was 45% which is comparable to that in coniferous forests of North America but lower than that in temperate forests of Australia and Portugal and the neighbouring dune thicket which shares several species with Afrotemperate forest. Fire severity had a significant negative effect on survival and tree size a significant positive effect. Total variance explained by the model (for species collectively) was 40.8%, of which fire severity and tree size combined explained 13.2%, and species as random factor, 27.6%. Respective tree species showed differential survival responses – four species showed high survival (> 60% of individuals), while five species showed low survival (< 40%). This study was the first post-fire assessment of the resprouting ability of Afrotemperate forest trees and a third of the trees surveyed (for species collectively) resprouted from the stem. This suggested that resprouting from the stem is a primary means of post-fire recovery in Afrotemperate forest trees, in contrast with previous assertions that several common canopy species, including Podocarpus latifolius, Afrocarpus falcatus, Scutia myrtina, Scolopia mundii and Rapanea melanophloeos, are unable to resprout. Varying resilience to fire among species supports previous suggestions that fire affects species’ composition and diversity in these forests and calls for careful management of fire regimes in the face of global change. , Thesis (MSc) -- Faculty of Science, School of Natural Resource Management, 2022
- Full Text: false
- Date Issued: 2022-04
Effect of fire severity on Afrotemperate forest tree survival
- Authors: Giddey, Brandon Louis
- Date: 2022-04
- Subjects: Trees -- Mortality , Wildfires
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/57413 , vital:57635
- Description: Weather patterns have changed globally with increased fire danger weather conditions, along with poor management and fire suppression, likely contributing to the increase in prevalence of large wildfires. Ecosystems such as temperate broad-leaved forests, where fire is limited by climatic conditions, are particularly at risk of altered fire regimes related to climate change. It is thus important to monitor the effects of fire in these ecosystems. Satellite remote sensing is a cost-effective way to assess spatial variability of fire effects on a landscape scale and has become an increasingly used tool for studying fire severity. In the southern Cape of South Africa during October-November 2018, a large wildfire burnt patches of Southern Cape Afrotemperate Forest (hereafter ‘Afrotemperate forest’). This provided an opportunity to investigate the accuracy of a satellite index for fire severity and the effect of fire on Afrotemperate forest survival. The first objective was to verify through field observations the accuracy of the differenced Normalised Burn Ratio (dNBR) as an index of fire severity derived from Sentinel 2 images in Afrotemperate forest. The second objective was to investigate the effect of fire severity and tree size on the post-fire survival of Afrotemperate forest tree species. For the first objective, stem fire severity, estimated from observed damage to the main stem, was recorded for 1 648 trees in 87 plots and linear regression used to test whether the observed measure of fire severity was related to dNBR. For the second objective, stem fire severity and tree survival 19-24 months post-fire were recorded for 40 species and 1 378 trees in 88 plots. Trees were considered to have survived if they resprouted from the main stem or had green foliage in the canopy. The survival response was assessed in relation to stem fire severity and tree size for all trees collectively and for 10 species (with sample size > 40) individually, using logistic regression. A strong linear relationship between dNBR and stem fire severity (r2 = 0.69, p < 0.001) confirmed the accuracy of dNBR as a measure of fire severity in Afrotemperate forest. In the fire investigated, 4 628 ha of Afrotemperate forest burnt of which 67% burnt at low severity, 21% at medium severity and 12% at high severity. The dNBR values associated with fire severity categories were comparable between Afrotemperate and North American forests, suggesting that dNBR values are relatively standard across forest types. Information on the distribution of fire severity vi facilitates investigation of further questions regarding past and future fire regimes and the fire ecology of Afrotemperate forest. The post-fire survival rate of Afrotemperate forest trees was 45% which is comparable to that in coniferous forests of North America but lower than that in temperate forests of Australia and Portugal and the neighbouring dune thicket which shares several species with Afrotemperate forest. Fire severity had a significant negative effect on survival and tree size a significant positive effect. Total variance explained by the model (for species collectively) was 40.8%, of which fire severity and tree size combined explained 13.2%, and species as random factor, 27.6%. Respective tree species showed differential survival responses – four species showed high survival (> 60% of individuals), while five species showed low survival (< 40%). This study was the first post-fire assessment of the resprouting ability of Afrotemperate forest trees and a third of the trees surveyed (for species collectively) resprouted from the stem. This suggested that resprouting from the stem is a primary means of post-fire recovery in Afrotemperate forest trees, in contrast with previous assertions that several common canopy species, including Podocarpus latifolius, Afrocarpus falcatus, Scutia myrtina, Scolopia mundii and Rapanea melanophloeos, are unable to resprout. Varying resilience to fire among species supports previous suggestions that fire affects species’ composition and diversity in these forests and calls for careful management of fire regimes in the face of global change. , Thesis (MSc) -- Faculty of Science, 2022
- Full Text:
- Date Issued: 2022-04
- Authors: Giddey, Brandon Louis
- Date: 2022-04
- Subjects: Trees -- Mortality , Wildfires
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/57413 , vital:57635
- Description: Weather patterns have changed globally with increased fire danger weather conditions, along with poor management and fire suppression, likely contributing to the increase in prevalence of large wildfires. Ecosystems such as temperate broad-leaved forests, where fire is limited by climatic conditions, are particularly at risk of altered fire regimes related to climate change. It is thus important to monitor the effects of fire in these ecosystems. Satellite remote sensing is a cost-effective way to assess spatial variability of fire effects on a landscape scale and has become an increasingly used tool for studying fire severity. In the southern Cape of South Africa during October-November 2018, a large wildfire burnt patches of Southern Cape Afrotemperate Forest (hereafter ‘Afrotemperate forest’). This provided an opportunity to investigate the accuracy of a satellite index for fire severity and the effect of fire on Afrotemperate forest survival. The first objective was to verify through field observations the accuracy of the differenced Normalised Burn Ratio (dNBR) as an index of fire severity derived from Sentinel 2 images in Afrotemperate forest. The second objective was to investigate the effect of fire severity and tree size on the post-fire survival of Afrotemperate forest tree species. For the first objective, stem fire severity, estimated from observed damage to the main stem, was recorded for 1 648 trees in 87 plots and linear regression used to test whether the observed measure of fire severity was related to dNBR. For the second objective, stem fire severity and tree survival 19-24 months post-fire were recorded for 40 species and 1 378 trees in 88 plots. Trees were considered to have survived if they resprouted from the main stem or had green foliage in the canopy. The survival response was assessed in relation to stem fire severity and tree size for all trees collectively and for 10 species (with sample size > 40) individually, using logistic regression. A strong linear relationship between dNBR and stem fire severity (r2 = 0.69, p < 0.001) confirmed the accuracy of dNBR as a measure of fire severity in Afrotemperate forest. In the fire investigated, 4 628 ha of Afrotemperate forest burnt of which 67% burnt at low severity, 21% at medium severity and 12% at high severity. The dNBR values associated with fire severity categories were comparable between Afrotemperate and North American forests, suggesting that dNBR values are relatively standard across forest types. Information on the distribution of fire severity vi facilitates investigation of further questions regarding past and future fire regimes and the fire ecology of Afrotemperate forest. The post-fire survival rate of Afrotemperate forest trees was 45% which is comparable to that in coniferous forests of North America but lower than that in temperate forests of Australia and Portugal and the neighbouring dune thicket which shares several species with Afrotemperate forest. Fire severity had a significant negative effect on survival and tree size a significant positive effect. Total variance explained by the model (for species collectively) was 40.8%, of which fire severity and tree size combined explained 13.2%, and species as random factor, 27.6%. Respective tree species showed differential survival responses – four species showed high survival (> 60% of individuals), while five species showed low survival (< 40%). This study was the first post-fire assessment of the resprouting ability of Afrotemperate forest trees and a third of the trees surveyed (for species collectively) resprouted from the stem. This suggested that resprouting from the stem is a primary means of post-fire recovery in Afrotemperate forest trees, in contrast with previous assertions that several common canopy species, including Podocarpus latifolius, Afrocarpus falcatus, Scutia myrtina, Scolopia mundii and Rapanea melanophloeos, are unable to resprout. Varying resilience to fire among species supports previous suggestions that fire affects species’ composition and diversity in these forests and calls for careful management of fire regimes in the face of global change. , Thesis (MSc) -- Faculty of Science, 2022
- Full Text:
- Date Issued: 2022-04
Encapsulation of flame retardants for lithium-ion battery safety
- Authors: Ntombela, Nompilo Princess
- Date: 2022-04
- Subjects: Port Elizabeth (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/55412 , vital:51993
- Description: Lithium-ion technology takes the lead in electric mobility systems, resulting in an increase in the global demand for Li-ion batteries; however, these batteries are associated with numerous safety concerns. Additionally, there are high costs, high energy and power issues which are some of its key limitations. Research efforts are focused on overcoming these obstacles, with different approaches being explored, such as the investigation of more stable salts, modification of active materials and organic solvents, and the use of electrolyte additives. This study focused specifically on electrolyte additives since the electrolyte is one of the most unstable components of the battery. The electrolyte’s decomposition is one of the reactions that occur inside a battery, which may occur due to overcharging or due to an internal short circuit, amongst others. The electrolyte’s decomposition occurs at the early stages of the thermal runaway process and forms part of the reactions that lead to fires and explosions. Thus, this research aims to develop suitable electrolyte additives to improve the safety aspects of Li-ion batteries. Flame retardant additives show great promise in reducing the flammability of the electrolyte in Li-ion batteries, since they serve to suppress the chemical reactions associated with battery ignition. They retard the fires by scavenging the active radical species formed during the decomposition reaction. In this study, the use of flame retardants was investigated. Flame retardant additives have shown to have flame impeding properties inside a battery; however, their direct addition to the electrolyte tends to cause adverse effects on the ionic conductivity and electrochemical performance of the cells. This study investigated an alternative option - the option to microencapsulate such additives into a neutral compound to ensure that the flame retardant has minimal/no effect on the performance of the battery. This investigation looked at tris(2-butoxyethyl) phosphate (TBP) and bis(2,2,2-trifluoroethyl) methylphosphonate (BFP) as flame retardant additives for the electrolyte. The TBP and BFP flame retardants were microencapsulated in poly(urea formaldehyde) (PUF) coating material via in situ polymerization method. The capsules were characterized using various analytical techniques - to prove it was successfully encapsulated. Electrochemical studies were further done on the capsules and neat flame retardants inside a coin cell. Self-extinguishing time (SET), which is the flammability test, proved that the additives have flame retarding abilities. Opto-digital microscopy (DSX) and scanning electron microscopy (SEM) did confirm the spherical shape of the microcapsules, where SEM also showed the smooth outer layer of the microcapsules and its hollow inner side. Fourier transform infrared spectroscopy (FTIR) proved the presence of the TBP and BFP inside the PUF resin by showing that the chemical composition of microcapsules consisted of both the PUF and flame retardant additives. Simultaneous DSC-TGA (DST) was also performed which showed that the microcapsules were stable before 200 °C, which indicates it would not decompose before the thermal runaway events are occurring. TGA analysis did show that the microcapsules underwent multiple decomposition steps upon heating. Additionally, 31P nuclear magnetic resonance (NMR) was used to quantify the amount of flame retardants additives encapsulated inside PUF shell, and also confirmed the stability of the microcapsules for one month in the electrolyte and at temperatures up to 200 °C. The ionic conductivity was vastly decreased when the flame retardants were added directly to the electrolyte. However, adding the flame retardants in a form of capsules had minimal effect on the ionic conductivity. The cycle capacities of the capsules were also improved when the capsules were added to the cell compared to that of neat flame retardants. The same effect was also noticed when doing Electrochemical Impedance Spectroscopy (EIS). This shows that microencapsulation improves the resistance of the cell caused by the flame retardant in comparison to when added directly to the electrolyte of the cell. , Thesis (MSC) -- Faculty of Science, School of Biomolecular and Chemical Sciences, 2022
- Full Text:
- Date Issued: 2022-04
- Authors: Ntombela, Nompilo Princess
- Date: 2022-04
- Subjects: Port Elizabeth (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/55412 , vital:51993
- Description: Lithium-ion technology takes the lead in electric mobility systems, resulting in an increase in the global demand for Li-ion batteries; however, these batteries are associated with numerous safety concerns. Additionally, there are high costs, high energy and power issues which are some of its key limitations. Research efforts are focused on overcoming these obstacles, with different approaches being explored, such as the investigation of more stable salts, modification of active materials and organic solvents, and the use of electrolyte additives. This study focused specifically on electrolyte additives since the electrolyte is one of the most unstable components of the battery. The electrolyte’s decomposition is one of the reactions that occur inside a battery, which may occur due to overcharging or due to an internal short circuit, amongst others. The electrolyte’s decomposition occurs at the early stages of the thermal runaway process and forms part of the reactions that lead to fires and explosions. Thus, this research aims to develop suitable electrolyte additives to improve the safety aspects of Li-ion batteries. Flame retardant additives show great promise in reducing the flammability of the electrolyte in Li-ion batteries, since they serve to suppress the chemical reactions associated with battery ignition. They retard the fires by scavenging the active radical species formed during the decomposition reaction. In this study, the use of flame retardants was investigated. Flame retardant additives have shown to have flame impeding properties inside a battery; however, their direct addition to the electrolyte tends to cause adverse effects on the ionic conductivity and electrochemical performance of the cells. This study investigated an alternative option - the option to microencapsulate such additives into a neutral compound to ensure that the flame retardant has minimal/no effect on the performance of the battery. This investigation looked at tris(2-butoxyethyl) phosphate (TBP) and bis(2,2,2-trifluoroethyl) methylphosphonate (BFP) as flame retardant additives for the electrolyte. The TBP and BFP flame retardants were microencapsulated in poly(urea formaldehyde) (PUF) coating material via in situ polymerization method. The capsules were characterized using various analytical techniques - to prove it was successfully encapsulated. Electrochemical studies were further done on the capsules and neat flame retardants inside a coin cell. Self-extinguishing time (SET), which is the flammability test, proved that the additives have flame retarding abilities. Opto-digital microscopy (DSX) and scanning electron microscopy (SEM) did confirm the spherical shape of the microcapsules, where SEM also showed the smooth outer layer of the microcapsules and its hollow inner side. Fourier transform infrared spectroscopy (FTIR) proved the presence of the TBP and BFP inside the PUF resin by showing that the chemical composition of microcapsules consisted of both the PUF and flame retardant additives. Simultaneous DSC-TGA (DST) was also performed which showed that the microcapsules were stable before 200 °C, which indicates it would not decompose before the thermal runaway events are occurring. TGA analysis did show that the microcapsules underwent multiple decomposition steps upon heating. Additionally, 31P nuclear magnetic resonance (NMR) was used to quantify the amount of flame retardants additives encapsulated inside PUF shell, and also confirmed the stability of the microcapsules for one month in the electrolyte and at temperatures up to 200 °C. The ionic conductivity was vastly decreased when the flame retardants were added directly to the electrolyte. However, adding the flame retardants in a form of capsules had minimal effect on the ionic conductivity. The cycle capacities of the capsules were also improved when the capsules were added to the cell compared to that of neat flame retardants. The same effect was also noticed when doing Electrochemical Impedance Spectroscopy (EIS). This shows that microencapsulation improves the resistance of the cell caused by the flame retardant in comparison to when added directly to the electrolyte of the cell. , Thesis (MSC) -- Faculty of Science, School of Biomolecular and Chemical Sciences, 2022
- Full Text:
- Date Issued: 2022-04
Foraging behaviour of the Sooty Albatross in relation to climatic variability and fisheries
- Authors: Banda, Shamiso
- Date: 2022-04
- Subjects: Spatial behavior in animals , Conservation of natural resources --South Africa
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/55632 , vital:53383
- Description: As top predators, seabirds occupy the upper trophic level of marine ecosystems. They are consequently important for the maintenance of ecosystem structure and function, while also possessing characteristics which are useful for identifying climate-driven changes in oceanography at all trophic levels. This important faunal group is one of the most threatened, with climate change and fisheries bycatch mortality being the primary drivers of population declines. Understanding these threats is important for the management of threatened seabird populations. One impact of climate change and variability in climate occurs through changes in prey availability. As central place foragers, breeding seabirds have trip duration constraints due to the obligation of nest duties. This makes them particularly vulnerable to changes in prey availability within their foraging ranges. The ability to adjust foraging behaviour during environmental conditions which alter prey availability is an important attribute which can contribute to breeding success. Thus, investigating for this foraging behavioural plasticity during different breeding stages provides insights into how a species is likely to be impacted by climate change. The sooty albatross population on Marion Island was studied and displayed a degree of foraging behavioural plasticity during the five-year period of pronounced climatic variability studied. Incubating birds mainly foraged in the subtropical convergence zone (STCZ), the Sub Antarctic Front (SAF) and Subtropical Front (STF) which border it, and the region north of the STF. Brooding birds mainly used the SAF and Polar Frontal Zone (PFZ). Significantly different areas were used between years during both breeding stages. This population showed a lack of consistent habitat preferences which may offer resilience to progressive climatic variability and change. Interactions of sooty albatrosses, as well as white-chinned petrels for comparative purposes, with fisheries were also assessed. The two species were compared to shed light on possible explanations for differences in seabird-fishery interactions between the species. The impact of fisheries-related mortality (bycatch) is dependent on exposure to fishing activity and attraction to fishing boats encountered while foraging. Bycatch mortality has previously been proposed as the main cause of this sooty albatross population’s decline. Exposure and 6 attraction to fishing boats was found to be lower than that of white-chinned petrels which are bycatch prone. However, the current level of attraction exhibited by this sooty albatross population may expose a significant fraction of the population to bycatch risk due to its small population size. Additionally, all fishing boats were encountered north of the STF where non breeding individuals are now known to be distributed. Thus, the impact of fisheries on this population may mainly be mediated by more bycatch prone non-breeding individuals. Overall, the relative impact of fisheries bycatch mortality is suggested to be higher than that of climatic impacts on the sooty albatross population on Marion Island. However, this study did not incorporate dietary and demographic information which would reveal whether there are nutritional differences between years that may impact on breeding success. An integrated rather than independent assessment of foraging behavioural responses to climatic variability and fishing activity is recommended for improving our understanding of current and future conservation priorities. , Thesis (MSc) -- Faculty of Science, Zoology , 2021
- Full Text:
- Date Issued: 2022-04
- Authors: Banda, Shamiso
- Date: 2022-04
- Subjects: Spatial behavior in animals , Conservation of natural resources --South Africa
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/55632 , vital:53383
- Description: As top predators, seabirds occupy the upper trophic level of marine ecosystems. They are consequently important for the maintenance of ecosystem structure and function, while also possessing characteristics which are useful for identifying climate-driven changes in oceanography at all trophic levels. This important faunal group is one of the most threatened, with climate change and fisheries bycatch mortality being the primary drivers of population declines. Understanding these threats is important for the management of threatened seabird populations. One impact of climate change and variability in climate occurs through changes in prey availability. As central place foragers, breeding seabirds have trip duration constraints due to the obligation of nest duties. This makes them particularly vulnerable to changes in prey availability within their foraging ranges. The ability to adjust foraging behaviour during environmental conditions which alter prey availability is an important attribute which can contribute to breeding success. Thus, investigating for this foraging behavioural plasticity during different breeding stages provides insights into how a species is likely to be impacted by climate change. The sooty albatross population on Marion Island was studied and displayed a degree of foraging behavioural plasticity during the five-year period of pronounced climatic variability studied. Incubating birds mainly foraged in the subtropical convergence zone (STCZ), the Sub Antarctic Front (SAF) and Subtropical Front (STF) which border it, and the region north of the STF. Brooding birds mainly used the SAF and Polar Frontal Zone (PFZ). Significantly different areas were used between years during both breeding stages. This population showed a lack of consistent habitat preferences which may offer resilience to progressive climatic variability and change. Interactions of sooty albatrosses, as well as white-chinned petrels for comparative purposes, with fisheries were also assessed. The two species were compared to shed light on possible explanations for differences in seabird-fishery interactions between the species. The impact of fisheries-related mortality (bycatch) is dependent on exposure to fishing activity and attraction to fishing boats encountered while foraging. Bycatch mortality has previously been proposed as the main cause of this sooty albatross population’s decline. Exposure and 6 attraction to fishing boats was found to be lower than that of white-chinned petrels which are bycatch prone. However, the current level of attraction exhibited by this sooty albatross population may expose a significant fraction of the population to bycatch risk due to its small population size. Additionally, all fishing boats were encountered north of the STF where non breeding individuals are now known to be distributed. Thus, the impact of fisheries on this population may mainly be mediated by more bycatch prone non-breeding individuals. Overall, the relative impact of fisheries bycatch mortality is suggested to be higher than that of climatic impacts on the sooty albatross population on Marion Island. However, this study did not incorporate dietary and demographic information which would reveal whether there are nutritional differences between years that may impact on breeding success. An integrated rather than independent assessment of foraging behavioural responses to climatic variability and fishing activity is recommended for improving our understanding of current and future conservation priorities. , Thesis (MSc) -- Faculty of Science, Zoology , 2021
- Full Text:
- Date Issued: 2022-04
Hydraulic vulnerability of Subtropical Thicket to drought : a remote sensing and physiological perspective
- Authors: Buttner, Daniel Harry
- Date: 2022-04
- Subjects: Port Elizabeth (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/55455 , vital:52017
- Description: Water availability is one of largest constraints on plant survival, growth, and species distribution globally. The recent escalation in tree mortality coupled with declining precipitation and amplified temperatures has implicated drought as a major cause behind many large-scale dieback events observed across the world. Raising the question, what makes some species more resistant and persist while others dwindle and vanish from the landscape? The observed variability in species drought susceptibility demonstrates the complexity of physiological responses of plants to changes in water availability. Hydraulic dysfunction in plants has been purported to be the key mechanism behind drought-induced mortality provoking interest in hydraulic traits and critical thresholds of xylem physiological function. The capability of species to maintain hydraulic functionality under drought strongly influences the survival and general productivity towards water deficits. Hence, two core objectives, and subsequently aims, of this thesis are firstly to investigate the effect of drought on Subtropical Thicket vegetation health and productivity, and secondly to examine the underpinning physiological mechanisms and functional thresholds relaying speciesspecific drought vulnerability within this semi-arid biome. In first data chapter, this thesis offers an assessment of vegetation change under drought and its influence on plant physiological function and productivity across a subsection of Subtropical Thicket distribution. Additionally, this chapter provides a regional scale perspective of drought on Subtropical Thicket flora in the Eastern Cape of South Africa. A severe anomalous dieback event, which coincided with extreme, accumulative drought conditions was observed in 2020. Employing a combination of field-based approaches and remote sensing, this chapter aimed to provide a comprehensive report of the extent and severity of crown defoliation and canopy dieback following this event, additionally describing predisposing and compounding factors. Based on Standardized Precipitation Evapotranspiration and Standardized Precipitation Indices this event began in 2015 and coincided with amplified temperatures, exacerbating evaporative demand. Aerial UAV surveys and field-based investigations were undertaken. Remotely sensed (RS) indices provided an avenue for extensive spatiotemporal investigations to uncover the extent of drought-related impact on vegetation productivity and discuss potential underpinning mechanisms behind drought-induced mortality in Subtropical Thicket. Leveraging long-term time series RS data, Normalized Difference Vegetation Index (NDVI) and Enhanced Vegetation Index (EVI), from Moderate Resolution Imaging Spectroradiometer (MODIS) satellites as a proxy vegetation physiological status in combination with SPI and SPEI describing drought condition and groundbased surveying defining canopy vitality condition this study incidentally addressed the aim of endeavoring to link drought-induced mortality and early warning symptoms observed in the field with RS time series data to describe drought impacts across Subtropical Thicket. Furthermore, the findings of this chapter demonstrate the spatial and temporal heterogeneity in drought impacts on Subtropical Thicket. The recent drought of 2015 till 2021 is the longest documented period for the past 50 years in which there has been no accumulated net positive water availability, this apparently perpetual state of water deficiency has enacted a high cost for vegetation productivity and growth for the study area, exhibited well by average NDVI values of less than -0.5 for over 70% of the research site. The findings of this chapter report, to the contrary of anecdotal suggestions in the literature, on the intrinsic tolerance of Subtropical Thicket and that ii drought has a far more significant role on overall vegetation productivity, growth, and mortality in this region. The second data chapter assess whole-plant physiological functionality during a drought event in the Eastern Cape, South Africa. This is the first study in Subtropical Thicket to quantify in situ hydraulic functional integrity under a natural drought event testing the leading hypothesis describing tree mortality – hydraulic dysfunction. This chapter firstly, investigates hydraulic traits (e.g., turgor loss point) and describe key physiological thresholds (e.g., P50) for maintaining function during drought. Secondly, levels of native embolism were determined under drought conditions and combined with measurements of xylem vulnerability to embolism providing an estimation of degree of hydraulic dysfunction experienced by six dominant woody canopy species in Subtropical Thicket – to quantify interspecific drought tolerance and susceptibility. Subtropical Thicket species exhibited remarkable tolerance towards desiccation (TLP from as low as -3MPa) and hydraulic functional resistance to embolism (P50 value as low as -7.89MPa). The observed unexpected drought resilience of subtropical derived lineages highlights the intrinsic evolutionary role aridification had, selecting for greater embolism resistance and community-level conservatism in drought resistance of Subtropical Thicket. The level of native embolism and hydraulic safety margins identified two species (Schotia latifolia and Polyagla myrtifolia) that were the most vulnerable, and a third (Pappea capensis) moderately vulnerable, then the remaining studied species – this could result in community-level adjustments in species composition and structure under future projected climate change scenarios where, increased frequencies of drought events are anticipated. This retrospective assessment of canopy vigor with physiological functional thresholds evokes hydraulic dysfunction as the principal mechanism of observed Subtropical Thicket dieback to drought. This chapter provides crucial in situ data for predictive assertions around drought-induced mortality risk in a phylogenetically diverse and climatically unique biome of southern Africa; and is the first to identify critical hydraulic thresholds for tree species within this region. , Thesis (MSc) -- Faculty of Science, School of Environmental Sciences, 2022
- Full Text:
- Date Issued: 2022-04
- Authors: Buttner, Daniel Harry
- Date: 2022-04
- Subjects: Port Elizabeth (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/55455 , vital:52017
- Description: Water availability is one of largest constraints on plant survival, growth, and species distribution globally. The recent escalation in tree mortality coupled with declining precipitation and amplified temperatures has implicated drought as a major cause behind many large-scale dieback events observed across the world. Raising the question, what makes some species more resistant and persist while others dwindle and vanish from the landscape? The observed variability in species drought susceptibility demonstrates the complexity of physiological responses of plants to changes in water availability. Hydraulic dysfunction in plants has been purported to be the key mechanism behind drought-induced mortality provoking interest in hydraulic traits and critical thresholds of xylem physiological function. The capability of species to maintain hydraulic functionality under drought strongly influences the survival and general productivity towards water deficits. Hence, two core objectives, and subsequently aims, of this thesis are firstly to investigate the effect of drought on Subtropical Thicket vegetation health and productivity, and secondly to examine the underpinning physiological mechanisms and functional thresholds relaying speciesspecific drought vulnerability within this semi-arid biome. In first data chapter, this thesis offers an assessment of vegetation change under drought and its influence on plant physiological function and productivity across a subsection of Subtropical Thicket distribution. Additionally, this chapter provides a regional scale perspective of drought on Subtropical Thicket flora in the Eastern Cape of South Africa. A severe anomalous dieback event, which coincided with extreme, accumulative drought conditions was observed in 2020. Employing a combination of field-based approaches and remote sensing, this chapter aimed to provide a comprehensive report of the extent and severity of crown defoliation and canopy dieback following this event, additionally describing predisposing and compounding factors. Based on Standardized Precipitation Evapotranspiration and Standardized Precipitation Indices this event began in 2015 and coincided with amplified temperatures, exacerbating evaporative demand. Aerial UAV surveys and field-based investigations were undertaken. Remotely sensed (RS) indices provided an avenue for extensive spatiotemporal investigations to uncover the extent of drought-related impact on vegetation productivity and discuss potential underpinning mechanisms behind drought-induced mortality in Subtropical Thicket. Leveraging long-term time series RS data, Normalized Difference Vegetation Index (NDVI) and Enhanced Vegetation Index (EVI), from Moderate Resolution Imaging Spectroradiometer (MODIS) satellites as a proxy vegetation physiological status in combination with SPI and SPEI describing drought condition and groundbased surveying defining canopy vitality condition this study incidentally addressed the aim of endeavoring to link drought-induced mortality and early warning symptoms observed in the field with RS time series data to describe drought impacts across Subtropical Thicket. Furthermore, the findings of this chapter demonstrate the spatial and temporal heterogeneity in drought impacts on Subtropical Thicket. The recent drought of 2015 till 2021 is the longest documented period for the past 50 years in which there has been no accumulated net positive water availability, this apparently perpetual state of water deficiency has enacted a high cost for vegetation productivity and growth for the study area, exhibited well by average NDVI values of less than -0.5 for over 70% of the research site. The findings of this chapter report, to the contrary of anecdotal suggestions in the literature, on the intrinsic tolerance of Subtropical Thicket and that ii drought has a far more significant role on overall vegetation productivity, growth, and mortality in this region. The second data chapter assess whole-plant physiological functionality during a drought event in the Eastern Cape, South Africa. This is the first study in Subtropical Thicket to quantify in situ hydraulic functional integrity under a natural drought event testing the leading hypothesis describing tree mortality – hydraulic dysfunction. This chapter firstly, investigates hydraulic traits (e.g., turgor loss point) and describe key physiological thresholds (e.g., P50) for maintaining function during drought. Secondly, levels of native embolism were determined under drought conditions and combined with measurements of xylem vulnerability to embolism providing an estimation of degree of hydraulic dysfunction experienced by six dominant woody canopy species in Subtropical Thicket – to quantify interspecific drought tolerance and susceptibility. Subtropical Thicket species exhibited remarkable tolerance towards desiccation (TLP from as low as -3MPa) and hydraulic functional resistance to embolism (P50 value as low as -7.89MPa). The observed unexpected drought resilience of subtropical derived lineages highlights the intrinsic evolutionary role aridification had, selecting for greater embolism resistance and community-level conservatism in drought resistance of Subtropical Thicket. The level of native embolism and hydraulic safety margins identified two species (Schotia latifolia and Polyagla myrtifolia) that were the most vulnerable, and a third (Pappea capensis) moderately vulnerable, then the remaining studied species – this could result in community-level adjustments in species composition and structure under future projected climate change scenarios where, increased frequencies of drought events are anticipated. This retrospective assessment of canopy vigor with physiological functional thresholds evokes hydraulic dysfunction as the principal mechanism of observed Subtropical Thicket dieback to drought. This chapter provides crucial in situ data for predictive assertions around drought-induced mortality risk in a phylogenetically diverse and climatically unique biome of southern Africa; and is the first to identify critical hydraulic thresholds for tree species within this region. , Thesis (MSc) -- Faculty of Science, School of Environmental Sciences, 2022
- Full Text:
- Date Issued: 2022-04
Impacts of algal blooms in a temperate Estuarine fish nursery area, South Africa
- Authors: Bornman, Eugin
- Date: 2022-04
- Subjects: Cyanobacterial toxins --Environmental aspects , Estuarine eutrophication --South Africa
- Language: English
- Type: Doctoral theses , text
- Identifier: http://hdl.handle.net/10948/55899 , vital:54398
- Description: Anthropogenically-derived eutrophication and Harmful Algal Blooms (HABs) are an increasing threat to estuarine ecosystems globally. The rapid population growth in coastal areas and the mismanagement of water resources have led to the rapid increase in eutrophication in estuaries. Consequently, HABs have become frequent phenomena with severe impacts on the ecological functioning of these systems. A paucity exists in understanding the specific mechanisms of how HABs impact estuarine communities globally. This has not been studied in South Africa, despite the observed increase in the occurrence of HABs in the past few decades. Therefore, this study investigated the impact of HABs on the ecological functioning of the anthropogenically altered Sundays Estuary, South Africa, which is affected by predictable and recurrent HABs of the raphidophyte, Heterosigma akashiwo. This study found that a high density (> 1000 cell m L-1 ) of H. akashiwo was present during all but the winter months in the poly- to mesohaline zone, yet it peaked in warmer spring/summer months with a density of ca. 70 000 cell m L-1 corresponding to 800 µg Chl-a L -1 . This species significantly altered the estuary's water quality, causing supersaturated surface- and hypoxic bottom-water during severe HABs or referred to as hypereutrophic bloom phases (> 60 µg Chl-a L -1 ). Despite these changes, the common copepod, Pseudodiaptomus hessei, occurred at similar densities among HAB phases and responded to similar triggers to the HAB. However, a shift in predator-prey interactions within the zooplankton community was evident, with scavenger or opportunist species such as the isopod, Cirolana fluviatilis, and the polychaete, Perinereis falsovariegata, occurring at higher densities during hypereutrophic bloom phases. The overall abundance of juvenile and small adult fishes were high during HABs, but the diversity decreased during HABs. Some species, notably the Mugilidae occurred at lower densities during HABs. Mugilidae also had pronounced histological gill alterations and a lowered proportion of secondary lamellae available for gas exchange during an in situ cage experiment where fishes were isolated inside and outside the HAB. Deformities such as tumorous growths were also found for the first time in a South African Estuary. This indicated a stressed population of Mugilidae in the Sundays Estuary. The ubiquitous mugilid, Mugil cephalus, actively avoided HABs during an acoustic telemetry study, despite having a home range that overlapped the HAB area. Tagged individuals mostly occupied areas directly above the HAB in the upper mesohaline to lower oligohaline zones and only iv briefly transitioned through the HAB area to utilise the lower reaches of the estuary. Since the formation of HABs is reliant on various factors, including specific species responses, environmental variables, nutrient enrichment, and flow characteristics, the impacts of HABs on estuarine communities may vary between estuarine systems or affected species. Therefore, more research that focuses on the impacts of HABs on estuaries is needed to limit the potential loss of ecosystem services. Particularly in light of further unsustainable development, upstream freshwater abstraction and climate change, will cause more frequent and severe HABs, that may result in fish population declines in the long-term. Better management and mitigation strategies are needed to reduce HAB formation such as reducing nutrient enrichment and restoring natural freshwater flow and flooding events to the Sundays Estuary. , Thesis (PhD) -- Faculty of Science, School of Environmental Sciences, 2022
- Full Text:
- Date Issued: 2022-04
- Authors: Bornman, Eugin
- Date: 2022-04
- Subjects: Cyanobacterial toxins --Environmental aspects , Estuarine eutrophication --South Africa
- Language: English
- Type: Doctoral theses , text
- Identifier: http://hdl.handle.net/10948/55899 , vital:54398
- Description: Anthropogenically-derived eutrophication and Harmful Algal Blooms (HABs) are an increasing threat to estuarine ecosystems globally. The rapid population growth in coastal areas and the mismanagement of water resources have led to the rapid increase in eutrophication in estuaries. Consequently, HABs have become frequent phenomena with severe impacts on the ecological functioning of these systems. A paucity exists in understanding the specific mechanisms of how HABs impact estuarine communities globally. This has not been studied in South Africa, despite the observed increase in the occurrence of HABs in the past few decades. Therefore, this study investigated the impact of HABs on the ecological functioning of the anthropogenically altered Sundays Estuary, South Africa, which is affected by predictable and recurrent HABs of the raphidophyte, Heterosigma akashiwo. This study found that a high density (> 1000 cell m L-1 ) of H. akashiwo was present during all but the winter months in the poly- to mesohaline zone, yet it peaked in warmer spring/summer months with a density of ca. 70 000 cell m L-1 corresponding to 800 µg Chl-a L -1 . This species significantly altered the estuary's water quality, causing supersaturated surface- and hypoxic bottom-water during severe HABs or referred to as hypereutrophic bloom phases (> 60 µg Chl-a L -1 ). Despite these changes, the common copepod, Pseudodiaptomus hessei, occurred at similar densities among HAB phases and responded to similar triggers to the HAB. However, a shift in predator-prey interactions within the zooplankton community was evident, with scavenger or opportunist species such as the isopod, Cirolana fluviatilis, and the polychaete, Perinereis falsovariegata, occurring at higher densities during hypereutrophic bloom phases. The overall abundance of juvenile and small adult fishes were high during HABs, but the diversity decreased during HABs. Some species, notably the Mugilidae occurred at lower densities during HABs. Mugilidae also had pronounced histological gill alterations and a lowered proportion of secondary lamellae available for gas exchange during an in situ cage experiment where fishes were isolated inside and outside the HAB. Deformities such as tumorous growths were also found for the first time in a South African Estuary. This indicated a stressed population of Mugilidae in the Sundays Estuary. The ubiquitous mugilid, Mugil cephalus, actively avoided HABs during an acoustic telemetry study, despite having a home range that overlapped the HAB area. Tagged individuals mostly occupied areas directly above the HAB in the upper mesohaline to lower oligohaline zones and only iv briefly transitioned through the HAB area to utilise the lower reaches of the estuary. Since the formation of HABs is reliant on various factors, including specific species responses, environmental variables, nutrient enrichment, and flow characteristics, the impacts of HABs on estuarine communities may vary between estuarine systems or affected species. Therefore, more research that focuses on the impacts of HABs on estuaries is needed to limit the potential loss of ecosystem services. Particularly in light of further unsustainable development, upstream freshwater abstraction and climate change, will cause more frequent and severe HABs, that may result in fish population declines in the long-term. Better management and mitigation strategies are needed to reduce HAB formation such as reducing nutrient enrichment and restoring natural freshwater flow and flooding events to the Sundays Estuary. , Thesis (PhD) -- Faculty of Science, School of Environmental Sciences, 2022
- Full Text:
- Date Issued: 2022-04
Phytochemical investigation and antidiabetic activity of cissampelos capensis and strychnos henningsii the Eastern Cape medicinal plants
- Authors: Latolla, Nehemiah Solomon
- Date: 2022-04
- Subjects: Medicinal plants -- Eastern Cape (South Africa) , Endemic plants -- South Africa
- Language: English
- Type: Doctoral theses , text
- Identifier: http://hdl.handle.net/10948/56145 , vital:55956
- Description: Diabetes mellitus is recorded as a significant health crisis in South Africa and various medicinal plants are used for the management of diabetes. However, the chemistry and bioactivity associated with these plants' antidiabetic activity are still lacking. Cissampelos capensis L.f. and Strychnos henningsii Gilg are among the plants utilised to manage diabetes in the Eastern Cape Province, South Africa. C. capensis and S. henningsii are known for their isoquinoline – and indole alkaloids, respectively. Other phytochemical groups associated with antidiabetic activity are the phenols, flavonoids, and terpenes. Thus, this study aimed to evaluate in-depth the phytochemical profiling, alkaloidal identification, and structural characterisation of phytochemicals isolated from these plants. Also, subsequent in vitro antidiabetic screening of the crude extracts and isolated compounds from both plants was done. The phytochemical profiling was performed by employing a qualitative and quantitative approach through high-performance thin layer chromatography (HPTLC) and UV-spectrometry. Further analysis for the identification of alkaloids was done by using LCMS. Fractionation and purification of crude extracts were achieved through crystallisation and various chromatographic techniques. NMR, HRMS, UV/Vis, FTIR, and XRD spectroscopic techniques were used to characterise isolated compounds. In vitro antidiabetic activity screening involved the investigation of cytotoxicity, antioxidant activity, alpha-amylase – and/or alpha-glucosidase inhibition (particular to type II diabetes). C. capensis and S. henningsii extracts tested positive for alkaloids, phenolics, flavonoids, and terpenes through HPTLC screening. Quantitative estimation by UV spectrometry of these phytochemical groups detected the highest concentration of alkaloids, followed by flavonoids, phenolics, and terpenes content. The in vitro antidiabetic biological screening of the various crude extracts suggested that the presence of alkaloids, flavonoids, phenolics, and terpenes fostered favourable biological activity. The LCMS of the known alkaloidal constituents from C. capensis detected the presence of ten alkaloids, including glaziovine, lauroscholtzine, pronuciferine and vi salutardine. Seven known alkaloids and one triterpene were detected from S. henningsii, including holtsiine, 23-hdroxyspermostrychnine, henningsiine, and the triterpene, friedelin. These findings suggest that C. capensis and S. henningsii have similar phytochemical constituents compared to the species reported in literature. However, the distribution of the phytochemicals in the various plant parts differed from previous accounts. , Thesis (PhD) -- Faculty of Science,School of Biomecular and Chemical Sciences , 2022
- Full Text:
- Date Issued: 2022-04
- Authors: Latolla, Nehemiah Solomon
- Date: 2022-04
- Subjects: Medicinal plants -- Eastern Cape (South Africa) , Endemic plants -- South Africa
- Language: English
- Type: Doctoral theses , text
- Identifier: http://hdl.handle.net/10948/56145 , vital:55956
- Description: Diabetes mellitus is recorded as a significant health crisis in South Africa and various medicinal plants are used for the management of diabetes. However, the chemistry and bioactivity associated with these plants' antidiabetic activity are still lacking. Cissampelos capensis L.f. and Strychnos henningsii Gilg are among the plants utilised to manage diabetes in the Eastern Cape Province, South Africa. C. capensis and S. henningsii are known for their isoquinoline – and indole alkaloids, respectively. Other phytochemical groups associated with antidiabetic activity are the phenols, flavonoids, and terpenes. Thus, this study aimed to evaluate in-depth the phytochemical profiling, alkaloidal identification, and structural characterisation of phytochemicals isolated from these plants. Also, subsequent in vitro antidiabetic screening of the crude extracts and isolated compounds from both plants was done. The phytochemical profiling was performed by employing a qualitative and quantitative approach through high-performance thin layer chromatography (HPTLC) and UV-spectrometry. Further analysis for the identification of alkaloids was done by using LCMS. Fractionation and purification of crude extracts were achieved through crystallisation and various chromatographic techniques. NMR, HRMS, UV/Vis, FTIR, and XRD spectroscopic techniques were used to characterise isolated compounds. In vitro antidiabetic activity screening involved the investigation of cytotoxicity, antioxidant activity, alpha-amylase – and/or alpha-glucosidase inhibition (particular to type II diabetes). C. capensis and S. henningsii extracts tested positive for alkaloids, phenolics, flavonoids, and terpenes through HPTLC screening. Quantitative estimation by UV spectrometry of these phytochemical groups detected the highest concentration of alkaloids, followed by flavonoids, phenolics, and terpenes content. The in vitro antidiabetic biological screening of the various crude extracts suggested that the presence of alkaloids, flavonoids, phenolics, and terpenes fostered favourable biological activity. The LCMS of the known alkaloidal constituents from C. capensis detected the presence of ten alkaloids, including glaziovine, lauroscholtzine, pronuciferine and vi salutardine. Seven known alkaloids and one triterpene were detected from S. henningsii, including holtsiine, 23-hdroxyspermostrychnine, henningsiine, and the triterpene, friedelin. These findings suggest that C. capensis and S. henningsii have similar phytochemical constituents compared to the species reported in literature. However, the distribution of the phytochemicals in the various plant parts differed from previous accounts. , Thesis (PhD) -- Faculty of Science,School of Biomecular and Chemical Sciences , 2022
- Full Text:
- Date Issued: 2022-04
Potential suppressive effects of alien Acacia melanoxylon on Afrotemperate Forest tree recruitment
- Miles, Bayleigh, Baard, Johan
- Authors: Miles, Bayleigh , Baard, Johan
- Date: 2022-04
- Subjects: Port Elizabeth (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/55391 , vital:51989
- Description: Acacia melanoxylon R.Br. is a prominent alien and invasive species in many parts of the world and evidence exists of its adverse effects on indigenous forest community composition through allelopathy and alteration of light regimes. The species also occurs extensively in Southern Cape Afrotemperate Forest (South Africa) and is thought to suppress indigenous Afrotemperate Forest tree seedlings through various mechanisms such as the alteration of natural light regimes or allelopathy, although this has not been rigorously verified. This study aimed to investigate whether Acacia melanoxylon has a suppressive effect on Afrotemperate Forest tree recruitment. Firstly, we assessed the potential allelopathic effect of Acacia melanoxylon and an indigenous Afrotemperate Forest species Olea capensis macrocarpa (C.H.Wright) I.Verd. on the germination of Acacia melanoxylon and three prominent indigenous tree species’ seedlings in a nursery trial. Germination of the indigenous species failed; however, we were able to compare the germination of Acacia melanoxylon among the three treatments, namely Acacia melanoxylon leachate, Olea capensis leachate, and no leachate. The average germination of Acacia melanoxylon was 67% and germination was marginally higher under Acacia melanoxylon leachate and Olea capensis leachate, respectively, than under the control. This suggested that germination of the species is improved, or at the least, unaffected, by leachates of itself or that of a common indigenous canopy species. We then critically evaluated the germination requirements of the indigenous test species to determine probable reasons why their germination failed in our trial. The most plausible explanation for the germination failure could be that the trial period did not encompass an entire winter season and may not have provided adequate cold stratification. We concluded that the lack of sensitivity of Acacia melanoxylon to leachates of itself or a common indigenous overstorey species likely contribute to its success as an invasive species in Southern Cape Afrotemperate Forest. Secondly, we investigated, through field surveys, whether Acacia melanoxylon affects indigenous Afrotemperate Forest tree sapling composition and light regimes underneath its canopy. Using a paired plot design, we compared light intensity, tree sapling species richness, diversity, and density underneath 30 overstorey Acacia melanoxylon trees and 30 indigenous counterparts. We recorded 2506 indigenous tree saplings from 29 species in the 60 plots and found that there were no significant differences in richness, diversity, or v density of saplings underneath Acacia melanoxylon compared to that under indigenous counterparts. Light intensity did not differ significantly underneath Acacia melanoxylon and indigenous canopies, however light intensity varied significantly more underneath the canopies of Acacia melanoxylon. Canonical correspondence analysis of the abundance of sapling species confirmed that sapling composition was not largely determined by the overstorey species. We concluded that Acacia melanoxylon does not significantly alter indigenous tree species composition underneath its canopy at the typical densities (<3 trees per hectare) at which it occurred in the forests of the Garden Route National Park that we surveyed. Nevertheless, populations of Acacia melanoxylon in the forest interior still act as a source of propagules for invasion in forest margins, riparian areas, and neighbouring fynbos shrubland. These invasive attributes need to be considered in the management of the species in the region at large. , Thesis (MSc) -- Faculty of Science, School of Natural Resource Management, 2022
- Full Text:
- Date Issued: 2022-04
- Authors: Miles, Bayleigh , Baard, Johan
- Date: 2022-04
- Subjects: Port Elizabeth (South Africa) , Eastern Cape (South Africa) , South Africa
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/55391 , vital:51989
- Description: Acacia melanoxylon R.Br. is a prominent alien and invasive species in many parts of the world and evidence exists of its adverse effects on indigenous forest community composition through allelopathy and alteration of light regimes. The species also occurs extensively in Southern Cape Afrotemperate Forest (South Africa) and is thought to suppress indigenous Afrotemperate Forest tree seedlings through various mechanisms such as the alteration of natural light regimes or allelopathy, although this has not been rigorously verified. This study aimed to investigate whether Acacia melanoxylon has a suppressive effect on Afrotemperate Forest tree recruitment. Firstly, we assessed the potential allelopathic effect of Acacia melanoxylon and an indigenous Afrotemperate Forest species Olea capensis macrocarpa (C.H.Wright) I.Verd. on the germination of Acacia melanoxylon and three prominent indigenous tree species’ seedlings in a nursery trial. Germination of the indigenous species failed; however, we were able to compare the germination of Acacia melanoxylon among the three treatments, namely Acacia melanoxylon leachate, Olea capensis leachate, and no leachate. The average germination of Acacia melanoxylon was 67% and germination was marginally higher under Acacia melanoxylon leachate and Olea capensis leachate, respectively, than under the control. This suggested that germination of the species is improved, or at the least, unaffected, by leachates of itself or that of a common indigenous canopy species. We then critically evaluated the germination requirements of the indigenous test species to determine probable reasons why their germination failed in our trial. The most plausible explanation for the germination failure could be that the trial period did not encompass an entire winter season and may not have provided adequate cold stratification. We concluded that the lack of sensitivity of Acacia melanoxylon to leachates of itself or a common indigenous overstorey species likely contribute to its success as an invasive species in Southern Cape Afrotemperate Forest. Secondly, we investigated, through field surveys, whether Acacia melanoxylon affects indigenous Afrotemperate Forest tree sapling composition and light regimes underneath its canopy. Using a paired plot design, we compared light intensity, tree sapling species richness, diversity, and density underneath 30 overstorey Acacia melanoxylon trees and 30 indigenous counterparts. We recorded 2506 indigenous tree saplings from 29 species in the 60 plots and found that there were no significant differences in richness, diversity, or v density of saplings underneath Acacia melanoxylon compared to that under indigenous counterparts. Light intensity did not differ significantly underneath Acacia melanoxylon and indigenous canopies, however light intensity varied significantly more underneath the canopies of Acacia melanoxylon. Canonical correspondence analysis of the abundance of sapling species confirmed that sapling composition was not largely determined by the overstorey species. We concluded that Acacia melanoxylon does not significantly alter indigenous tree species composition underneath its canopy at the typical densities (<3 trees per hectare) at which it occurred in the forests of the Garden Route National Park that we surveyed. Nevertheless, populations of Acacia melanoxylon in the forest interior still act as a source of propagules for invasion in forest margins, riparian areas, and neighbouring fynbos shrubland. These invasive attributes need to be considered in the management of the species in the region at large. , Thesis (MSc) -- Faculty of Science, School of Natural Resource Management, 2022
- Full Text:
- Date Issued: 2022-04
Refining predator-prey preference at the prey demographic level for cheetah and lion
- Authors: Annear, Eleesha
- Date: 2022-04
- Subjects: Social behavior in animals --South Africa , Predatory animals –Behavior
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/55800 , vital:53880
- Description: Traditional prey preference models estimate prey preference using a coarse species-specific body mass of three-quarters of the mean adult female body mass. This is widely assumed to estimate the average mass across prey populations, accounting for neonates, juveniles, sub-adults, and adults. However, this approach negates the models’ ability to predict demography-specific prey preferences, thus reducing our ability to predict the impacts of predation on prey populations. The objectives of this study were to 1) refine the prey selection models, using lion Panthera leo and cheetah Acinonyx jubatus as model species, by incorporating prey demographic classes and season and, 2) determine the influence of seasonal variability in availability of these prey demographic classes on cheetah reproduction. Lions preferentially killed adults of larger species (e.g., wildebeest, waterbuck, and zebra) irrespective of the season, as predicted by optimal foraging theory. Sub-adult, juvenile, and neonate prey were killed by lions relative to their abundance. Cheetahs preferred juvenile prey of large species, namely kudu, zebra, and wildebeest. Season influenced cheetah preference with neonates and juveniles being preferred during the wet season and adults of smaller species, and juveniles of larger species being preferred during the dry season. Thus, results support the alternative demographic class hypothesis. Furthermore, the availability of neonate and juvenile prey drives cheetah reproduction patterns with conception and cub independence coinciding with the peak availability of easy-to-catch neonates. Lactation coincided with the high availability of relatively larger juveniles to ensure that females obtain enough resources to sustain the most energetically costly reproductive phase. In addition, I suggest cheetah may be particularly vulnerable to disturbances that impact on prey reproduction (e.g., drought, fire, and flood), given their reliance on neonate and juvenile prey. My findings highlight that estimating species-level prey preference using a coarse species-specific body mass masks the level of prey use and potential preferences for the different prey demographic classes. The use of some prey species may be largely confined to juveniles by smaller predators, meaning that prey availability would vary seasonally, may influence reproductive patterns, and carrying capacity models would need to be revised in terms of the available demographic-specific prey biomass. , Thesis (MSc) -- Faculty of Sciences, School of Environmental Sciences, 2022
- Full Text:
- Date Issued: 2022-04
- Authors: Annear, Eleesha
- Date: 2022-04
- Subjects: Social behavior in animals --South Africa , Predatory animals –Behavior
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/55800 , vital:53880
- Description: Traditional prey preference models estimate prey preference using a coarse species-specific body mass of three-quarters of the mean adult female body mass. This is widely assumed to estimate the average mass across prey populations, accounting for neonates, juveniles, sub-adults, and adults. However, this approach negates the models’ ability to predict demography-specific prey preferences, thus reducing our ability to predict the impacts of predation on prey populations. The objectives of this study were to 1) refine the prey selection models, using lion Panthera leo and cheetah Acinonyx jubatus as model species, by incorporating prey demographic classes and season and, 2) determine the influence of seasonal variability in availability of these prey demographic classes on cheetah reproduction. Lions preferentially killed adults of larger species (e.g., wildebeest, waterbuck, and zebra) irrespective of the season, as predicted by optimal foraging theory. Sub-adult, juvenile, and neonate prey were killed by lions relative to their abundance. Cheetahs preferred juvenile prey of large species, namely kudu, zebra, and wildebeest. Season influenced cheetah preference with neonates and juveniles being preferred during the wet season and adults of smaller species, and juveniles of larger species being preferred during the dry season. Thus, results support the alternative demographic class hypothesis. Furthermore, the availability of neonate and juvenile prey drives cheetah reproduction patterns with conception and cub independence coinciding with the peak availability of easy-to-catch neonates. Lactation coincided with the high availability of relatively larger juveniles to ensure that females obtain enough resources to sustain the most energetically costly reproductive phase. In addition, I suggest cheetah may be particularly vulnerable to disturbances that impact on prey reproduction (e.g., drought, fire, and flood), given their reliance on neonate and juvenile prey. My findings highlight that estimating species-level prey preference using a coarse species-specific body mass masks the level of prey use and potential preferences for the different prey demographic classes. The use of some prey species may be largely confined to juveniles by smaller predators, meaning that prey availability would vary seasonally, may influence reproductive patterns, and carrying capacity models would need to be revised in terms of the available demographic-specific prey biomass. , Thesis (MSc) -- Faculty of Sciences, School of Environmental Sciences, 2022
- Full Text:
- Date Issued: 2022-04
Seasonal changes of metals in the salt marsh and seagrass beds of the Swartkops Estuary
- Authors: Nel, Marelé Annette
- Date: 2022-04
- Subjects: Salt marshes--Effect of heavy metals on--South Africa--Swartkops River Estuary , Estuarine ecology --South Africa --Swartkops River Estuary
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/55734 , vital:53411
- Description: Estuaries are historically convenient places to build industries, as it was deemed a suitable place to dispose of large quantities of urban and industrial waste into the ocean. At the time it was judged to be appropriate, as rivers can transport and deposit waste into the ocean, which was considered so vast that it is insurmountable. Therefore, metal pollution in estuaries is a well-known occurrence. Coastal wetlands play an important role in the cycling of metals, and act as effective metal sinks. They provide an important ecosystem service acting as accumulators and phytostabilisers, which make toxic levels of the metals unavailable to the rest of the food chain. The overall aim of this study was to assess the metal pollution in the salt marsh (Salicornia tegetaria and Spartina maritima) and seagrass (Zostera capensis) of the heavily developed Swartkops Estuary. Assessing the metals in the estuary will provide information on effective environmental management strategies. Metal concentrations were measured in the rhizosediment of the three wetland plants, bare sediment, and in the tissues (leaves, shoots, and roots) of the selected plant species. Sampling occurred during one seasonal cycle (2019-2020), and in 5 sites along the middle and lower reaches of the estuary. Metal concentrations were not the highest closest to the point sources in the middle reaches, but the metals rather accumulated downstream in Site 3 (Tiger Bay launch site close to the WwTW) and Site 4 (Tippers’ Creek), which were depositional sites. Although these two sites generally displayed the highest metal concentrations, they also had the most seasonal fluctuations in their metal concentrations and sediment characteristics. Flushing events in spring/summer were likely the determining factor of these fluctuations. The mouth of the estuary (Site 5) consistently had much lower metal concentrations, with distinctly more sandy, low organic content sediment, due to marine-influenced flushing. Thus, spatial differences were distinct in the estuary, however seasonal differences did not play an important role in the metal concentrations, indicating that seasonal sampling was not as important as sampling in different sites. Assessing the metal concentrations in different rhizosediment gave important insights on intertidal accumulation and contrasted with the unvegetated (bare) sediment. The metals generally accumulated more, higher up the intertidal range, due to less frequent tidal inundation and flushing — so that metal accumulated in the vegetation in the following order: Z. capensis > S. maritima > S. tegetaria. Moreover, unvegetated (bare sediment) showed much lower metal concentrations compared to the rhizosediment, indicating that the vegetation trapped small particles, and changes the physical environment to concentrate metals in their rhizosphere. Lastly, the plant species all displayed good accumulation of metals in their roots, while Z. capensis also showed remarkable uptake to its leaves. The study identified S. maritima and S. tegetaria as good phytostabilisers, particularly the latter with its vi high metal stocks and slow root turnover rate. The compartmentalization in these plants were unique to each species, corroborating previous assessments that compartmentalization cannot be compared between similar life forms and genera. These results contribute to local and international research on biogeochemistry in wetlands, and assessment of pollution in developed estuaries. Of note is Z. capensis, an endemic Southern African species, which has not been analysed for compartmentalization of metals before. All three of the studied species have potential as metal accumulators, and therefore a sink of metals. They localize the metals, limiting bioaccumulation to the rest of the food chain, which reduces the ecotoxic effect of metals in the environment. Higher accumulation in vegetated (rhizosediment) over bare sediment, make these habitats valuable metal sinks. This increases their importance in estuaries receiving high pollution loads, and they should be prioritized in conservation efforts. Two sites within the Swartkops Estuary, Tippers’ Creek (Site 4) and the Launch Site (Site 3), are potential sites for long-term monitoring due their capacity to trap and accumulate metals. The results of this study will inform local management on the state of metals in the Swartkops Estuary, providing crucial information on the importance of preserving local wetlands for the purpose of regulating toxic levels of metals in the ecosystem. , Thesis (MSc) -- Faculty of Science, Botany, 2022
- Full Text:
- Date Issued: 2022-04
- Authors: Nel, Marelé Annette
- Date: 2022-04
- Subjects: Salt marshes--Effect of heavy metals on--South Africa--Swartkops River Estuary , Estuarine ecology --South Africa --Swartkops River Estuary
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10948/55734 , vital:53411
- Description: Estuaries are historically convenient places to build industries, as it was deemed a suitable place to dispose of large quantities of urban and industrial waste into the ocean. At the time it was judged to be appropriate, as rivers can transport and deposit waste into the ocean, which was considered so vast that it is insurmountable. Therefore, metal pollution in estuaries is a well-known occurrence. Coastal wetlands play an important role in the cycling of metals, and act as effective metal sinks. They provide an important ecosystem service acting as accumulators and phytostabilisers, which make toxic levels of the metals unavailable to the rest of the food chain. The overall aim of this study was to assess the metal pollution in the salt marsh (Salicornia tegetaria and Spartina maritima) and seagrass (Zostera capensis) of the heavily developed Swartkops Estuary. Assessing the metals in the estuary will provide information on effective environmental management strategies. Metal concentrations were measured in the rhizosediment of the three wetland plants, bare sediment, and in the tissues (leaves, shoots, and roots) of the selected plant species. Sampling occurred during one seasonal cycle (2019-2020), and in 5 sites along the middle and lower reaches of the estuary. Metal concentrations were not the highest closest to the point sources in the middle reaches, but the metals rather accumulated downstream in Site 3 (Tiger Bay launch site close to the WwTW) and Site 4 (Tippers’ Creek), which were depositional sites. Although these two sites generally displayed the highest metal concentrations, they also had the most seasonal fluctuations in their metal concentrations and sediment characteristics. Flushing events in spring/summer were likely the determining factor of these fluctuations. The mouth of the estuary (Site 5) consistently had much lower metal concentrations, with distinctly more sandy, low organic content sediment, due to marine-influenced flushing. Thus, spatial differences were distinct in the estuary, however seasonal differences did not play an important role in the metal concentrations, indicating that seasonal sampling was not as important as sampling in different sites. Assessing the metal concentrations in different rhizosediment gave important insights on intertidal accumulation and contrasted with the unvegetated (bare) sediment. The metals generally accumulated more, higher up the intertidal range, due to less frequent tidal inundation and flushing — so that metal accumulated in the vegetation in the following order: Z. capensis > S. maritima > S. tegetaria. Moreover, unvegetated (bare sediment) showed much lower metal concentrations compared to the rhizosediment, indicating that the vegetation trapped small particles, and changes the physical environment to concentrate metals in their rhizosphere. Lastly, the plant species all displayed good accumulation of metals in their roots, while Z. capensis also showed remarkable uptake to its leaves. The study identified S. maritima and S. tegetaria as good phytostabilisers, particularly the latter with its vi high metal stocks and slow root turnover rate. The compartmentalization in these plants were unique to each species, corroborating previous assessments that compartmentalization cannot be compared between similar life forms and genera. These results contribute to local and international research on biogeochemistry in wetlands, and assessment of pollution in developed estuaries. Of note is Z. capensis, an endemic Southern African species, which has not been analysed for compartmentalization of metals before. All three of the studied species have potential as metal accumulators, and therefore a sink of metals. They localize the metals, limiting bioaccumulation to the rest of the food chain, which reduces the ecotoxic effect of metals in the environment. Higher accumulation in vegetated (rhizosediment) over bare sediment, make these habitats valuable metal sinks. This increases their importance in estuaries receiving high pollution loads, and they should be prioritized in conservation efforts. Two sites within the Swartkops Estuary, Tippers’ Creek (Site 4) and the Launch Site (Site 3), are potential sites for long-term monitoring due their capacity to trap and accumulate metals. The results of this study will inform local management on the state of metals in the Swartkops Estuary, providing crucial information on the importance of preserving local wetlands for the purpose of regulating toxic levels of metals in the ecosystem. , Thesis (MSc) -- Faculty of Science, Botany, 2022
- Full Text:
- Date Issued: 2022-04