Creating a space for integrative education within the sciences
- Authors: Van der Post, Leda
- Date: 2012
- Subjects: Computer science -- Vocational guidance , Education, Cooperative , Curriculum evaluation , Experiential learning -- Science
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:10482 , http://hdl.handle.net/10948/d1012677 , Computer science -- Vocational guidance , Education, Cooperative , Curriculum evaluation , Experiential learning -- Science
- Description: This thesis documents an action research project that was carried out within the Department of Computing Sciences at the Nelson Mandela Metropolitan University (NMMU), South Africa, from January 2010 to December 2011. The overall aim of the research was to foster an environment in which academics could explore ways to teach using an integrative approach to education. Previous research within the department had raised the concern that students were graduating without the type of high-level cognitive skills that were required in the workplace. While the students’ technical skills were perceived as being excellent, employers indicated that students would benefit from opportunities to develop or improve skills such as communication, teamwork, innovative thinking and time management. These skills include high-level cognitive skills, and are often referred to as “soft skills”. The academics participating in the research project came to believe that it was essential to develop teaching methods that would provide opportunities for students to develop these soft skills, in conjunction with the content and technical knowledge currently addressed in their courses. The research project followed the living theory approach to action research. A living theory action research project allows the researcher to investigate her own teaching, and develop a theory of practice. The theory of practice can be applied to the issues under investigation, to improve the situation or solve problems. At the same time, the theory of practice can contribute to the body of knowledge within the academic domain of the research. Action research is an iterative, cyclical process. There were four research cycles, each one semester in length, during the two years of the project. The project will continue, with a fifth research cycle, starting in January 2012. By the end of the fourth research cycle—Semester Two, 2011—there were eleven academics actively participating in the research group. The project had extended its influence to include academics from the Department of Mathematics at NMMU. The academics ranged from senior, long-serving professors to junior lecturing staff. The results of the research, or the researcher-practitioner’s living theory, explain the process by which an effective and enthusiastic community of practice, dedicated to improving the academics’ teaching and learning practice, was developed. The living theory is applicable to academics within a scientific discipline, desiring to explore and improve their education practice. My living theory explains the characteristics of the TLC (The Learning Community) space, and the action strategies for creating such a space. The explanation of the process of this project includes an analysis of the development process of the research group, typical characteristics of the environment or “space” of the group, and action strategies that other academics could use to create a similar community of practice.
- Full Text:
- Date Issued: 2012
- Authors: Van der Post, Leda
- Date: 2012
- Subjects: Computer science -- Vocational guidance , Education, Cooperative , Curriculum evaluation , Experiential learning -- Science
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:10482 , http://hdl.handle.net/10948/d1012677 , Computer science -- Vocational guidance , Education, Cooperative , Curriculum evaluation , Experiential learning -- Science
- Description: This thesis documents an action research project that was carried out within the Department of Computing Sciences at the Nelson Mandela Metropolitan University (NMMU), South Africa, from January 2010 to December 2011. The overall aim of the research was to foster an environment in which academics could explore ways to teach using an integrative approach to education. Previous research within the department had raised the concern that students were graduating without the type of high-level cognitive skills that were required in the workplace. While the students’ technical skills were perceived as being excellent, employers indicated that students would benefit from opportunities to develop or improve skills such as communication, teamwork, innovative thinking and time management. These skills include high-level cognitive skills, and are often referred to as “soft skills”. The academics participating in the research project came to believe that it was essential to develop teaching methods that would provide opportunities for students to develop these soft skills, in conjunction with the content and technical knowledge currently addressed in their courses. The research project followed the living theory approach to action research. A living theory action research project allows the researcher to investigate her own teaching, and develop a theory of practice. The theory of practice can be applied to the issues under investigation, to improve the situation or solve problems. At the same time, the theory of practice can contribute to the body of knowledge within the academic domain of the research. Action research is an iterative, cyclical process. There were four research cycles, each one semester in length, during the two years of the project. The project will continue, with a fifth research cycle, starting in January 2012. By the end of the fourth research cycle—Semester Two, 2011—there were eleven academics actively participating in the research group. The project had extended its influence to include academics from the Department of Mathematics at NMMU. The academics ranged from senior, long-serving professors to junior lecturing staff. The results of the research, or the researcher-practitioner’s living theory, explain the process by which an effective and enthusiastic community of practice, dedicated to improving the academics’ teaching and learning practice, was developed. The living theory is applicable to academics within a scientific discipline, desiring to explore and improve their education practice. My living theory explains the characteristics of the TLC (The Learning Community) space, and the action strategies for creating such a space. The explanation of the process of this project includes an analysis of the development process of the research group, typical characteristics of the environment or “space” of the group, and action strategies that other academics could use to create a similar community of practice.
- Full Text:
- Date Issued: 2012
Soil erosion and sediment source dynamics of a catchment in the Eastern Cape province, South Africa: an approach using remote sensing and sediment source fingerprinting techniques
- Authors: Manjoro, Munyaradzi
- Date: 2012
- Subjects: Soil erosion -- South Africa -- Eastern Cape
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:10663 , http://hdl.handle.net/10948/d1015038
- Description: This study originated from an evaluation of the performance of a commercially available high concentration point focus concentrator PV system. The effect of module design flaws was studied by using current-voltage (I-V) curves obtained from each module in the array. The position of reverse bias steps revealed the severity of mismatch in a string of series-connected cells. By understanding the effects of the various types of mismatch, power losses and damage to the solar cells resulting from hot spot formation can be minimized and several recommendations for improving the basic performance of similar systems were made. Concern over the extent and type of defect failure of the concentrator photovoltaic (CPV) cells prompted an investigation into the use of a light beam induced current (LBIC) technique to investigate the spatial distribution of defects. An overview of current and developing LBIC techniques revealed that the original standard LBIC techniques have found widespread application, and that far-reaching and important developments of the technique have taken place over the years. These developments are driven by natural progression as well as the availability of newly developed advanced measurement equipment. Several techniques such as Lock-in Thermography and the use of infrared cameras have developed as complementary techniques to advanced LBIC techniques. As an accurate contactless evaluation tool that is able to image spatially distributed defects in cell material, the basis of this method seemed promising for the evaluation of concentrator cells.
- Full Text:
- Date Issued: 2012
- Authors: Manjoro, Munyaradzi
- Date: 2012
- Subjects: Soil erosion -- South Africa -- Eastern Cape
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:10663 , http://hdl.handle.net/10948/d1015038
- Description: This study originated from an evaluation of the performance of a commercially available high concentration point focus concentrator PV system. The effect of module design flaws was studied by using current-voltage (I-V) curves obtained from each module in the array. The position of reverse bias steps revealed the severity of mismatch in a string of series-connected cells. By understanding the effects of the various types of mismatch, power losses and damage to the solar cells resulting from hot spot formation can be minimized and several recommendations for improving the basic performance of similar systems were made. Concern over the extent and type of defect failure of the concentrator photovoltaic (CPV) cells prompted an investigation into the use of a light beam induced current (LBIC) technique to investigate the spatial distribution of defects. An overview of current and developing LBIC techniques revealed that the original standard LBIC techniques have found widespread application, and that far-reaching and important developments of the technique have taken place over the years. These developments are driven by natural progression as well as the availability of newly developed advanced measurement equipment. Several techniques such as Lock-in Thermography and the use of infrared cameras have developed as complementary techniques to advanced LBIC techniques. As an accurate contactless evaluation tool that is able to image spatially distributed defects in cell material, the basis of this method seemed promising for the evaluation of concentrator cells.
- Full Text:
- Date Issued: 2012
A model for mobile, context-aware in-car communication systems to reduce driver distractions
- Authors: Tchankue-Sielinou, Patrick
- Date: 2015
- Subjects: Automobiles -- Safety measures , Context-aware computing , Mobile communication systems
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10948/4144 , vital:20556
- Description: Driver distraction remains a matter of concern throughout the world as the number of car accidents caused by distracted driving is still unacceptably high. Industry and academia are working intensively to design new techniques that will address all types of driver distraction including visual, manual, auditory and cognitive distraction. This research focuses on an existing technology, namely in-car communication systems (ICCS). ICCS allow drivers to interact with their mobile phones without touching or looking at them. Previous research suggests that ICCS have reduced visual and manual distraction. Two problems were identified in this research: existing ICCS are still expensive and only available in limited models of car. As a result of that, only a small number of drivers can obtain a car equipped with an ICCS, especially in developing countries. The second problem is that existing ICCS are not aware of the driving context, which plays a role in distracting drivers. This research project was based on the following thesis statement: A mobile, context-aware model can be designed to reduce driver distraction caused by the use of ICCS. A mobile ICCS is portable and can be used in any car, addressing the first problem. Context-awareness will be used to detect possible situations that contribute to distracting drivers and the interaction with the mobile ICCS will be adapted so as to avert calls and text messages. This will address the second problem. As the driving context is dynamic, drivers may have to deal with critical safety-related tasks while they are using an existing ICCS. The following steps were taken in order to validate the thesis statement. An investigation was conducted into the causes and consequences of driver distraction. A review of literature was conducted on context-aware techniques that could potentially be used. The design of a model was proposed, called the Multimodal Interface for Mobile Info-communication with Context (MIMIC) and a preliminary usability evaluation was conducted in order to assess the feasibility of a speech-based, mobile ICCS. Despite some problems with the speech recognition, the results were satisfying and showed that the proposed model for mobile ICCS was feasible. Experiments were conducted in order to collect data to perform supervised learning to determine the driving context. The aim was to select the most effective machine learning techniques to determine the driving context. Decision tree and instance-based algorithms were found to be the best performing algorithms. Variables such as speed, acceleration and linear acceleration were found to be the most important variables according to an analysis of the decision tree. The initial MIMIC model was updated to include several adaptation effects and the resulting model was implemented as a prototype mobile application, called MIMIC-Prototype.
- Full Text:
- Date Issued: 2015
- Authors: Tchankue-Sielinou, Patrick
- Date: 2015
- Subjects: Automobiles -- Safety measures , Context-aware computing , Mobile communication systems
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10948/4144 , vital:20556
- Description: Driver distraction remains a matter of concern throughout the world as the number of car accidents caused by distracted driving is still unacceptably high. Industry and academia are working intensively to design new techniques that will address all types of driver distraction including visual, manual, auditory and cognitive distraction. This research focuses on an existing technology, namely in-car communication systems (ICCS). ICCS allow drivers to interact with their mobile phones without touching or looking at them. Previous research suggests that ICCS have reduced visual and manual distraction. Two problems were identified in this research: existing ICCS are still expensive and only available in limited models of car. As a result of that, only a small number of drivers can obtain a car equipped with an ICCS, especially in developing countries. The second problem is that existing ICCS are not aware of the driving context, which plays a role in distracting drivers. This research project was based on the following thesis statement: A mobile, context-aware model can be designed to reduce driver distraction caused by the use of ICCS. A mobile ICCS is portable and can be used in any car, addressing the first problem. Context-awareness will be used to detect possible situations that contribute to distracting drivers and the interaction with the mobile ICCS will be adapted so as to avert calls and text messages. This will address the second problem. As the driving context is dynamic, drivers may have to deal with critical safety-related tasks while they are using an existing ICCS. The following steps were taken in order to validate the thesis statement. An investigation was conducted into the causes and consequences of driver distraction. A review of literature was conducted on context-aware techniques that could potentially be used. The design of a model was proposed, called the Multimodal Interface for Mobile Info-communication with Context (MIMIC) and a preliminary usability evaluation was conducted in order to assess the feasibility of a speech-based, mobile ICCS. Despite some problems with the speech recognition, the results were satisfying and showed that the proposed model for mobile ICCS was feasible. Experiments were conducted in order to collect data to perform supervised learning to determine the driving context. The aim was to select the most effective machine learning techniques to determine the driving context. Decision tree and instance-based algorithms were found to be the best performing algorithms. Variables such as speed, acceleration and linear acceleration were found to be the most important variables according to an analysis of the decision tree. The initial MIMIC model was updated to include several adaptation effects and the resulting model was implemented as a prototype mobile application, called MIMIC-Prototype.
- Full Text:
- Date Issued: 2015
An investigation of the morphological and electrochemical properties of spinel cathode oxide materials used in li-ion batteries
- Authors: Snyders, Charmelle
- Date: 2016
- Subjects: Lithium ion batteries Cathodes
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10948/12929 , vital:27135
- Description: Li-ion batteries have become the more dominant battery type used in portable electronic devices such as cell phones, computers and more recently their application in full electric vehicles (EV). Li-ion batteries have many advantages over the traditional rechargeable systems (Pb-acid and Ni-MH) such as their higher energy density, low self-discharge, long capacity cycle life and relatively maintenance free. Due to their commercial advantages, a lot of research is done in developing new novel Li-ion electrode materials, improving existing ones and to reduce manufacturing costs in order to make them more cost effective in their applications. This study looked at the cathode material chemistry that has a typical spinel manganese oxide (LiMn2O4) type structure. For comparison the study also considered the influence of doping the phase with various metals such as Al, Mg, Co and Ni that were made as precursors using various carboxylic acids (Citric, Ascorbic, Succinic and Poly-acrylic acid) from a sol-gel process. Traditional batch methods of synthesizing the electrode material is costly and do not necessarily provide optimized electrochemical performance. Alternative continuous less energy intensive methods would help reduce the costs of the preparation of the electrode materials. This study investigated the influence of two synthesis techniques on the materials physical and electrochemical characteristics. These synthesis methods included the use of a typical batch sol-gel method and the continuous spray-drying technique. The spinel materials were prepared and characterized by Powder X-Ray Diffraction (PXRD) to confirm the formation of various phases during the synthesis process. In addition, in-situ PXRD techniques were used to track the phase changes that occurred in the typical batch synthesis process from a sol-gel mixture to the final crystalline spinel oxide. The materials were also characterized by thermal gravimetric analysis (TGA), whereby the materials decomposition mechanisms were observed as the precursor was gradually heated to the final oxide. These synthesized materials prepared under various conditions were then used to build suitable Li-ion coin type of cells, whereby their electrochemical properties were tested by simple capacity tests and electrochemical impedance spectroscopy (EIS). EIS measurements were done on the built cells with the various materials at various charge voltages. TG analysis showed that the materials underwent multiple decomposition steps upon heating for the doped lithium manganese oxides, whereas the undoped oxide showed only a single decomposition step. The results showed that all the materials achieved their weight loss below 400 °C, and that the final spinel oxide had already formed. The in-situ PXRD analysis showed the progression of the phase transitions where certain of the materials changed from a crystalline precursor to an amorphous intermediate phase and then finally to the spinel cathode oxide (Li1.03Mg0.2Mn1.77O4, and LiCo1.09Mn0.91O4). For other materials, the precursor would start as an amorphous phase, and then upon heating, convert into an impure intermediate phase (Mn2O3) before forming the final spinel oxide (Li1.03Mn1.97O4 and LiNi0.5Mn1.5O4). The in-situ study also showed the increases in the materials respective lattice parameters of the crystalline unit cells upon heating and the significant increases in their crystallite sizes when heated above 600 °C. Hence the results implied that a type of sintering of the particles would occur at temperatures above 600 °C, thereby increasing the respective crystallite size. The study showed that the cathode active materials made by the sol-gel spray-drying method would give a material that had a significantly larger surface area and a smaller crystallite size when compared to the materials made by the batch process. The electrochemical analysis showed that there was only a slight increase in the discharge capacities of the cells made with the spray-drying technique when compared to the cells made with the materials from the batch sol-gel technique. Whereas, the EIS study showed that there were distinct differences in the charging behavior of the cells made with the various materials using different synthesis techniques. The EIS results showed that there was a general decrease in the cells charge transfer resistance (Rct) as the charge potential increased regardless of the synthesis method used for the various materials. The results also showed that the lithium-ion diffusion coefficient (DLi) obtained from EIS measurements were in most of the samples higher for the cathode materials that had a larger surface area. This implied that the Li-ion could diffuse at a faster rate through the bulk material. The study concluded that by optimizing the synthesis process in terms of the careful control of the thermal parameters, the Li-ion batteries‟ cathode active material of the manganese spinel type could be optimized and be manufactured by using a continuous flow micro spray process.
- Full Text:
- Date Issued: 2016
- Authors: Snyders, Charmelle
- Date: 2016
- Subjects: Lithium ion batteries Cathodes
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10948/12929 , vital:27135
- Description: Li-ion batteries have become the more dominant battery type used in portable electronic devices such as cell phones, computers and more recently their application in full electric vehicles (EV). Li-ion batteries have many advantages over the traditional rechargeable systems (Pb-acid and Ni-MH) such as their higher energy density, low self-discharge, long capacity cycle life and relatively maintenance free. Due to their commercial advantages, a lot of research is done in developing new novel Li-ion electrode materials, improving existing ones and to reduce manufacturing costs in order to make them more cost effective in their applications. This study looked at the cathode material chemistry that has a typical spinel manganese oxide (LiMn2O4) type structure. For comparison the study also considered the influence of doping the phase with various metals such as Al, Mg, Co and Ni that were made as precursors using various carboxylic acids (Citric, Ascorbic, Succinic and Poly-acrylic acid) from a sol-gel process. Traditional batch methods of synthesizing the electrode material is costly and do not necessarily provide optimized electrochemical performance. Alternative continuous less energy intensive methods would help reduce the costs of the preparation of the electrode materials. This study investigated the influence of two synthesis techniques on the materials physical and electrochemical characteristics. These synthesis methods included the use of a typical batch sol-gel method and the continuous spray-drying technique. The spinel materials were prepared and characterized by Powder X-Ray Diffraction (PXRD) to confirm the formation of various phases during the synthesis process. In addition, in-situ PXRD techniques were used to track the phase changes that occurred in the typical batch synthesis process from a sol-gel mixture to the final crystalline spinel oxide. The materials were also characterized by thermal gravimetric analysis (TGA), whereby the materials decomposition mechanisms were observed as the precursor was gradually heated to the final oxide. These synthesized materials prepared under various conditions were then used to build suitable Li-ion coin type of cells, whereby their electrochemical properties were tested by simple capacity tests and electrochemical impedance spectroscopy (EIS). EIS measurements were done on the built cells with the various materials at various charge voltages. TG analysis showed that the materials underwent multiple decomposition steps upon heating for the doped lithium manganese oxides, whereas the undoped oxide showed only a single decomposition step. The results showed that all the materials achieved their weight loss below 400 °C, and that the final spinel oxide had already formed. The in-situ PXRD analysis showed the progression of the phase transitions where certain of the materials changed from a crystalline precursor to an amorphous intermediate phase and then finally to the spinel cathode oxide (Li1.03Mg0.2Mn1.77O4, and LiCo1.09Mn0.91O4). For other materials, the precursor would start as an amorphous phase, and then upon heating, convert into an impure intermediate phase (Mn2O3) before forming the final spinel oxide (Li1.03Mn1.97O4 and LiNi0.5Mn1.5O4). The in-situ study also showed the increases in the materials respective lattice parameters of the crystalline unit cells upon heating and the significant increases in their crystallite sizes when heated above 600 °C. Hence the results implied that a type of sintering of the particles would occur at temperatures above 600 °C, thereby increasing the respective crystallite size. The study showed that the cathode active materials made by the sol-gel spray-drying method would give a material that had a significantly larger surface area and a smaller crystallite size when compared to the materials made by the batch process. The electrochemical analysis showed that there was only a slight increase in the discharge capacities of the cells made with the spray-drying technique when compared to the cells made with the materials from the batch sol-gel technique. Whereas, the EIS study showed that there were distinct differences in the charging behavior of the cells made with the various materials using different synthesis techniques. The EIS results showed that there was a general decrease in the cells charge transfer resistance (Rct) as the charge potential increased regardless of the synthesis method used for the various materials. The results also showed that the lithium-ion diffusion coefficient (DLi) obtained from EIS measurements were in most of the samples higher for the cathode materials that had a larger surface area. This implied that the Li-ion could diffuse at a faster rate through the bulk material. The study concluded that by optimizing the synthesis process in terms of the careful control of the thermal parameters, the Li-ion batteries‟ cathode active material of the manganese spinel type could be optimized and be manufactured by using a continuous flow micro spray process.
- Full Text:
- Date Issued: 2016
Estuarine microalgal bloom dynamics at multiple temporal scales
- Authors: Lemley, Daniel Alan
- Date: 2018
- Subjects: Ecological integrity -- South Africa , Phytoplankton populations -- South Africa , Estuarine ecology -- South Africa , Freshwater algae -- Ecology -- South Africa
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10948/21044 , vital:29431
- Description: Microalgal communities sustain the ecological functioning of estuarine ecosystems through the provision of numerous ecosystem services. As such, gaining an understanding of the processes that govern spatio-temporal patterns of phytoplankton communities is key to the effective management of these ecosystems. However, detailed investigations of estuarine phytoplankton dynamics, and particularly harmful algal blooms (HAB), are largely absent in South Africa. Therefore, geared at addressing these knowledge gaps, this study was initiated to elucidate the processes shaping estuarine phytoplankton bloom dynamics at multiple temporal scales. Initially, five permanently open estuaries, each with varying types and levels of anthropogenic pressures, were selected to test the efficacy of an estuarine eutrophic condition index to flow variability (‘Annual’ study). Results from this study highlighted the sensitivity of the proposed index to environmental perturbations (e.g. flood events), whilst also identifying freshwater inflow variability and anthropogenic disturbance as the key processes shaping microalgal responses at an annual scale. Next, the agriculturally-influenced Gamtoos and Sundays estuaries were further investigated to elucidate the role of natural and anthropogenic drivers in defining microalgal responses (‘Seasonal’ study). Despite similarities in nutrient input and temperature patterns, phytoplankton bloom conditions (> 20 μg Chl-a l-1) were episodic and flow-dependent in the Gamtoos Estuary, whilst those in the Sundays Estuary were persistent and seasonal. Related to its reduced hydrodynamic variability – i.e. consistent nutrient-rich baseflows and reduced propensity for flushing events – persistent undesirable disturbances were highlighted for the Sundays Estuary, including: summer bottom-water hypoxia (< 2 mg l-1) and exceptional proliferations (> 550 μg Chl-a l-1) of two HAB species (Heterosigma akashiwo and Heterocapsa rotundata). Finally, fine-scale ecological research was undertaken in the Sundays Estuary to identify the processes – abiotic and biotic – that facilitate HABs (‘Daily’ and ‘Hourly’ studies). Findings from the ‘Daily’ study, identified inorganic nutrient availability (i.e. nitrate and phosphate) and mesohaline conditions (ca. 10) as the key bottom-up controls influencing the magnitude and duration of spring/summer phytoplankton blooms. Additionally, bottom-water hypoxia was explicitly linked to the decay of a single HAB species. During the ‘Hourly’ investigation, four known HAB-forming species were recorded at bloom concentrations. Model results indicated that variability in temperature, salinity profiles and nitrate concentrations were significant in facilitating the occurrence of HAB species. Finally, local biotic interactions (e.g. interspecies competition, diel vertical migration and mixotrophy) were recognized as key mechanisms shaping phytoplankton communities. The persistent occurrence of HABs is a new feature in South African estuaries and continued research is needed to recommend management responses. Ultimately, this research highlights the multitude of processes at work shaping phytoplankton variability in estuaries. From a broad perspective (i.e. seasonal and annual), processes such as freshwater inflow regimes, degree of anthropogenic disturbance, as well as seasonal temperature and nutrient supply patterns are the key processes. At a more refined scale (i.e. hourly and daily), local processes including salinity preferences, nutrient availability, diel light cycles and internal biotic interactions are the key drivers organising phytoplankton dynamics. Given the potentially severe ecological consequences of disrupting natural phytoplankton dynamics (e.g. HABs), an element of ‘unpredictability’ should be restored to the hydrological and chemical makeup of highly-regulated estuaries to prevent the continued exacerbation of eutrophic symptoms.
- Full Text:
- Date Issued: 2018
- Authors: Lemley, Daniel Alan
- Date: 2018
- Subjects: Ecological integrity -- South Africa , Phytoplankton populations -- South Africa , Estuarine ecology -- South Africa , Freshwater algae -- Ecology -- South Africa
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10948/21044 , vital:29431
- Description: Microalgal communities sustain the ecological functioning of estuarine ecosystems through the provision of numerous ecosystem services. As such, gaining an understanding of the processes that govern spatio-temporal patterns of phytoplankton communities is key to the effective management of these ecosystems. However, detailed investigations of estuarine phytoplankton dynamics, and particularly harmful algal blooms (HAB), are largely absent in South Africa. Therefore, geared at addressing these knowledge gaps, this study was initiated to elucidate the processes shaping estuarine phytoplankton bloom dynamics at multiple temporal scales. Initially, five permanently open estuaries, each with varying types and levels of anthropogenic pressures, were selected to test the efficacy of an estuarine eutrophic condition index to flow variability (‘Annual’ study). Results from this study highlighted the sensitivity of the proposed index to environmental perturbations (e.g. flood events), whilst also identifying freshwater inflow variability and anthropogenic disturbance as the key processes shaping microalgal responses at an annual scale. Next, the agriculturally-influenced Gamtoos and Sundays estuaries were further investigated to elucidate the role of natural and anthropogenic drivers in defining microalgal responses (‘Seasonal’ study). Despite similarities in nutrient input and temperature patterns, phytoplankton bloom conditions (> 20 μg Chl-a l-1) were episodic and flow-dependent in the Gamtoos Estuary, whilst those in the Sundays Estuary were persistent and seasonal. Related to its reduced hydrodynamic variability – i.e. consistent nutrient-rich baseflows and reduced propensity for flushing events – persistent undesirable disturbances were highlighted for the Sundays Estuary, including: summer bottom-water hypoxia (< 2 mg l-1) and exceptional proliferations (> 550 μg Chl-a l-1) of two HAB species (Heterosigma akashiwo and Heterocapsa rotundata). Finally, fine-scale ecological research was undertaken in the Sundays Estuary to identify the processes – abiotic and biotic – that facilitate HABs (‘Daily’ and ‘Hourly’ studies). Findings from the ‘Daily’ study, identified inorganic nutrient availability (i.e. nitrate and phosphate) and mesohaline conditions (ca. 10) as the key bottom-up controls influencing the magnitude and duration of spring/summer phytoplankton blooms. Additionally, bottom-water hypoxia was explicitly linked to the decay of a single HAB species. During the ‘Hourly’ investigation, four known HAB-forming species were recorded at bloom concentrations. Model results indicated that variability in temperature, salinity profiles and nitrate concentrations were significant in facilitating the occurrence of HAB species. Finally, local biotic interactions (e.g. interspecies competition, diel vertical migration and mixotrophy) were recognized as key mechanisms shaping phytoplankton communities. The persistent occurrence of HABs is a new feature in South African estuaries and continued research is needed to recommend management responses. Ultimately, this research highlights the multitude of processes at work shaping phytoplankton variability in estuaries. From a broad perspective (i.e. seasonal and annual), processes such as freshwater inflow regimes, degree of anthropogenic disturbance, as well as seasonal temperature and nutrient supply patterns are the key processes. At a more refined scale (i.e. hourly and daily), local processes including salinity preferences, nutrient availability, diel light cycles and internal biotic interactions are the key drivers organising phytoplankton dynamics. Given the potentially severe ecological consequences of disrupting natural phytoplankton dynamics (e.g. HABs), an element of ‘unpredictability’ should be restored to the hydrological and chemical makeup of highly-regulated estuaries to prevent the continued exacerbation of eutrophic symptoms.
- Full Text:
- Date Issued: 2018
The in vitro biological activities of three Hypoxis species and their active compounds
- Authors: Boukes, Gerhardt Johannes
- Date: 2010
- Subjects: Potatoes -- Africa , Potatoes -- Therapeutic use , Medicinal plants
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:10322 , http://hdl.handle.net/10948/1228 , Potatoes -- Africa , Potatoes -- Therapeutic use , Medicinal plants
- Description: The African potato is used as an African traditional medicine for its nutritional and medicinal properties. Most research has been carried out on H. hemerocallidea, with very little or nothing on other Hypoxis spp. The main aim of this project was to provide scientific data on the anticancer, anti-inflammatory and antioxidant properties of H. hemerocallidea, H. stellipilis and H. sobolifera chloroform extracts and their active compounds. The hypoxoside and phytosterol contents of the three Hypoxis spp. were determined using TLC, HPLC and GC. H. hemerocallidea and H. sobolifera chloroform extracts contained the highest amounts of hypoxoside and β-sitosterol, respectively. For the anticancer properties, cytotoxicity of the Hypoxis extracts and its purified compounds were determined against the HeLa, HT-29 and MCF-7 cancer cell lines (using MTT), and PBMCs (using CellTiter-Blue®). H. sobolifera had the best cytotoxicity against the three cancer cell lines, whereas H. stellipilis stimulated HeLa and HT-29 cancer cell growth. IC50 values of hypoxoside and rooperol were determined. DNA cell cycle arrest (using PI staining) occurred in the late G1/early S (confirmed by increased p21Waf1/Cip1 expression) and G2/M phases after 15 and 48 hrs, respectively, when treated with Hypoxis extracts and rooperol. H. sobolifera and rooperol activated caspase-3 and -7 (using fluorescently labelled antibodies) in HeLa and HT-29 cancer cells, and caspase-7 in MCF-7 cancer cells after 48 hrs. Annexin V binding to phosphatidylserines in rooperol treated U937 cells confirmed early apoptosis after 15 hrs. The TUNEL assay showed DNA fragmentation in the three cancer cell lines when treated with H. sobolifera and rooperol for 48 hrs. A shift pass the G2/M phase has led to the investigation of endoreduplication, which was confirmed by cell/nucleus size, and anti-apoptotic proteins (Akt, phospho-Akt, phospho-Bcl-2 and p21Waf1/Cip1). U937 cell differentiation to monocyte-macrophages was optimized using PMA and 1,25(OH)2D3, which was confirmed by morphological and biochemical changes. For the anti-inflammatory properties, Hypoxis extracts and rooperol significantly increased NO production in monocyte-macrophages (pre-loaded with DAF-2 DA) and phagocytosis of pHrodoTM E. coli BioParticles®. The treatments had no effect on COX-2 expression in monocyte-macrophages. The phytosterols significantly increased IL-1β and IL-6 secretion xv (using the FlowCytomix Multiplex human Th1/Th2 10plex Kit I) in the PBMCs of one donor. For the antioxidant properties, Hypoxis extracts and rooperol significantly increased ROS production in undifferentiated and differentiated U937 cells, which were pre-loaded with DCFH-DA. Hypoxis extracts and purified compounds had ferric reducing activities, but only rooperol had ferric reducing activities significantly greater than ascorbic acid. β-sitosterol, campesterol and cholesterol significantly increased SOD activity in Chang liver cells, while H. stellipilis, H. sobolifera and rooperol decreased SOD activity. Anticancer, anti-inflammatory and antioxidant properties of the Hypoxis extracts may be attributed to the β-sitosterol content, because Hypoxis chloroform extracts contained very little or no hypoxoside. Unidentified compounds, and synergistic and additive effects of the compounds may have contributed to the biological effects. This study confirms previous reports that rooperol is the active compound. Results provide scientific data on the medicinal properties of one of the most frequently used medicinal plants in South Africa.
- Full Text:
- Date Issued: 2010
- Authors: Boukes, Gerhardt Johannes
- Date: 2010
- Subjects: Potatoes -- Africa , Potatoes -- Therapeutic use , Medicinal plants
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:10322 , http://hdl.handle.net/10948/1228 , Potatoes -- Africa , Potatoes -- Therapeutic use , Medicinal plants
- Description: The African potato is used as an African traditional medicine for its nutritional and medicinal properties. Most research has been carried out on H. hemerocallidea, with very little or nothing on other Hypoxis spp. The main aim of this project was to provide scientific data on the anticancer, anti-inflammatory and antioxidant properties of H. hemerocallidea, H. stellipilis and H. sobolifera chloroform extracts and their active compounds. The hypoxoside and phytosterol contents of the three Hypoxis spp. were determined using TLC, HPLC and GC. H. hemerocallidea and H. sobolifera chloroform extracts contained the highest amounts of hypoxoside and β-sitosterol, respectively. For the anticancer properties, cytotoxicity of the Hypoxis extracts and its purified compounds were determined against the HeLa, HT-29 and MCF-7 cancer cell lines (using MTT), and PBMCs (using CellTiter-Blue®). H. sobolifera had the best cytotoxicity against the three cancer cell lines, whereas H. stellipilis stimulated HeLa and HT-29 cancer cell growth. IC50 values of hypoxoside and rooperol were determined. DNA cell cycle arrest (using PI staining) occurred in the late G1/early S (confirmed by increased p21Waf1/Cip1 expression) and G2/M phases after 15 and 48 hrs, respectively, when treated with Hypoxis extracts and rooperol. H. sobolifera and rooperol activated caspase-3 and -7 (using fluorescently labelled antibodies) in HeLa and HT-29 cancer cells, and caspase-7 in MCF-7 cancer cells after 48 hrs. Annexin V binding to phosphatidylserines in rooperol treated U937 cells confirmed early apoptosis after 15 hrs. The TUNEL assay showed DNA fragmentation in the three cancer cell lines when treated with H. sobolifera and rooperol for 48 hrs. A shift pass the G2/M phase has led to the investigation of endoreduplication, which was confirmed by cell/nucleus size, and anti-apoptotic proteins (Akt, phospho-Akt, phospho-Bcl-2 and p21Waf1/Cip1). U937 cell differentiation to monocyte-macrophages was optimized using PMA and 1,25(OH)2D3, which was confirmed by morphological and biochemical changes. For the anti-inflammatory properties, Hypoxis extracts and rooperol significantly increased NO production in monocyte-macrophages (pre-loaded with DAF-2 DA) and phagocytosis of pHrodoTM E. coli BioParticles®. The treatments had no effect on COX-2 expression in monocyte-macrophages. The phytosterols significantly increased IL-1β and IL-6 secretion xv (using the FlowCytomix Multiplex human Th1/Th2 10plex Kit I) in the PBMCs of one donor. For the antioxidant properties, Hypoxis extracts and rooperol significantly increased ROS production in undifferentiated and differentiated U937 cells, which were pre-loaded with DCFH-DA. Hypoxis extracts and purified compounds had ferric reducing activities, but only rooperol had ferric reducing activities significantly greater than ascorbic acid. β-sitosterol, campesterol and cholesterol significantly increased SOD activity in Chang liver cells, while H. stellipilis, H. sobolifera and rooperol decreased SOD activity. Anticancer, anti-inflammatory and antioxidant properties of the Hypoxis extracts may be attributed to the β-sitosterol content, because Hypoxis chloroform extracts contained very little or no hypoxoside. Unidentified compounds, and synergistic and additive effects of the compounds may have contributed to the biological effects. This study confirms previous reports that rooperol is the active compound. Results provide scientific data on the medicinal properties of one of the most frequently used medicinal plants in South Africa.
- Full Text:
- Date Issued: 2010
Contributions to the use of microalgae in estuarine freshwater reserve determinations
- Authors: Snow, Gavin Charles
- Date: 2007
- Subjects: Microalgae -- South Africa , Estuarine ecology -- South Africa
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:10620 , http://hdl.handle.net/10948/709 , Microalgae -- South Africa , Estuarine ecology -- South Africa
- Description: The ecologist Garrett Hardin (1968) introduced a useful concept called the tragedy of the commons, which describes how ecological resources become threatened or lost. The term “commons” is based on the commons of old English villages and is symbolic of a resource that is shared by a group of people. If every person were to use each resource in a sustainable fashion it would be available in perpetuity. However, if people use more than their share they would only increase their personal wealth to the detriment of others. In addition, an increase in the population would mean that the size of each share would have to decrease to accommodate the larger number of people. As a result, resources are threatened by personal greed and uncontrolled population growth. Freshwater is an example of a common resource that is under threat in South Africa where the average annual rainfall is less than 60 percent of the global average (Mukheibir & Sparks 2006). The increasing demands for freshwater as well as its eutrophication are major concerns with regards to estuarine health, environmental resource management and human health. The correct management of water is necessary to ensure that it is utilised in a sustainable manner. The National Water Act (No. 36 of 1998) has provided the rights to water for basic human needs and for sustainable ecological function; the Basic Human Needs Reserve and Ecological Reserve are both provided as a right in law. The amount of water necessary for an estuary to retain an acceptable ecological status, known as the Estuarine Ecological Reserve, is determined through the implementation of procedures (rapid, intermediate or comprehensive) compiled by the Department of Water Affairs and Forestry (1999) in its Resource Directed Measures (RDM) for the Protection of Water Resources. The impact of restricted flow on estuaries can be reduced by manipulating the water released from impoundments, the regulation of water abstractions within the river catchment or both (Hirji et al. 2002). The reserve assessment method is designed to evaluate ecosystem requirements by employing groups of specialists from different disciplines. In South Africa, this includes hydrologists, sedimentologists, water chemists and biologists (including microalgae specialists). The use of microalgae in ecological assessments has largely been based on research that was initiated at the Nelson Mandela Metropolitan University (formerly University of Port Elizabeth) and subsequently at Rhodes University (Grahamstown) and the University of KwaZulu Natal (Durban). The microalgal research can be divided into two main focus areas; phytoplankton and benthic microalgae
- Full Text:
- Date Issued: 2007
- Authors: Snow, Gavin Charles
- Date: 2007
- Subjects: Microalgae -- South Africa , Estuarine ecology -- South Africa
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:10620 , http://hdl.handle.net/10948/709 , Microalgae -- South Africa , Estuarine ecology -- South Africa
- Description: The ecologist Garrett Hardin (1968) introduced a useful concept called the tragedy of the commons, which describes how ecological resources become threatened or lost. The term “commons” is based on the commons of old English villages and is symbolic of a resource that is shared by a group of people. If every person were to use each resource in a sustainable fashion it would be available in perpetuity. However, if people use more than their share they would only increase their personal wealth to the detriment of others. In addition, an increase in the population would mean that the size of each share would have to decrease to accommodate the larger number of people. As a result, resources are threatened by personal greed and uncontrolled population growth. Freshwater is an example of a common resource that is under threat in South Africa where the average annual rainfall is less than 60 percent of the global average (Mukheibir & Sparks 2006). The increasing demands for freshwater as well as its eutrophication are major concerns with regards to estuarine health, environmental resource management and human health. The correct management of water is necessary to ensure that it is utilised in a sustainable manner. The National Water Act (No. 36 of 1998) has provided the rights to water for basic human needs and for sustainable ecological function; the Basic Human Needs Reserve and Ecological Reserve are both provided as a right in law. The amount of water necessary for an estuary to retain an acceptable ecological status, known as the Estuarine Ecological Reserve, is determined through the implementation of procedures (rapid, intermediate or comprehensive) compiled by the Department of Water Affairs and Forestry (1999) in its Resource Directed Measures (RDM) for the Protection of Water Resources. The impact of restricted flow on estuaries can be reduced by manipulating the water released from impoundments, the regulation of water abstractions within the river catchment or both (Hirji et al. 2002). The reserve assessment method is designed to evaluate ecosystem requirements by employing groups of specialists from different disciplines. In South Africa, this includes hydrologists, sedimentologists, water chemists and biologists (including microalgae specialists). The use of microalgae in ecological assessments has largely been based on research that was initiated at the Nelson Mandela Metropolitan University (formerly University of Port Elizabeth) and subsequently at Rhodes University (Grahamstown) and the University of KwaZulu Natal (Durban). The microalgal research can be divided into two main focus areas; phytoplankton and benthic microalgae
- Full Text:
- Date Issued: 2007
The past and present limnology of the Soetendalsvlei wetlands, Agulhas coast, South Africa
- Authors: Gordon, Nuette
- Date: 2012
- Subjects: Limnology -- South Africa
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:10619 , http://hdl.handle.net/10948/d1009430 , Limnology -- South Africa
- Description: As climatic conditions continue to change globally, there is a need to assess past environmental change in relation to changing water balance, temperature and sea-level. By understanding the extent of past environmental change, and how anthropogenic impacts have affected ecosystems, better and more accurate future predictions of change can be made. Through the use of the sedimentary record within coastal wetlands, geochemical, (organic content and stable isotopes) and biological (diatoms) proxies were utilised to determine; (i) the baseline water quality record for Soetendalsvlei, one of only a few coastal lakes in South Africa, (ii) the effect of agriculture and mouth manipulation of the Heuningnes Estuary on the microalgae ecology and (iii) the link between palaeo-salinity and trophic status on a regional basis between Soetendalsvlei and Groenvlei, situated 320 km apart. Present water quality and phytoplankton biomass and community structure were assessed for Soetendalsvlei and its associated wetlands, Voëlvlei and Waskraalsvlei to determine the current health of these systems and to obtain modern diatom analogues to be used in the palaeolimnological reconstruction of the coastal lake. Diatoms were not dominant during this study period. Chlorophytes and flagellates were the dominant phytoplankton groups throughout the different wetlands. With the exception of Voëlvlei, the wetlands were all in good health, although SRP concentrations were within the eutrophic to hypertrophic range and are cause for concern. In Voëlvlei, phytoplankton biomass was within the eutrophic range with chlorophyll a concentrations ranging between 20 – 400 ug.l-1 Cyanobacteria, a further indicator of eutrophic conditions, were dominant during the warmer summer periods. Rainfall and freshwater inflow had a significant effect on the biomass and composition of the phytoplankton and acted as a resetting mechanism for all the wetlands as water quality conditions improved thereafter. Comparisons of the water quality and phytoplankton community between the upper reaches of the Heuningnes Estuary and Soetendalsvlei, indicated that artificial breaching of the estuary mouth significantly impacted the connectivity between these two systems, with marine intrusion extending into the upper reaches, while freshwater conditions dominate in the coastal lake. Unfortunately for the palaeolimnological study diatom preservation was poor, however, geochemistry and stable isotope analyses did provide adequate evidence of marine transgression (~8000 yr BP and 4000-2000 yr BP) and regression events comparable to other South African sea-level models developed for the east and west coast. High organic matter content (i.e. higher trophic state) and estuarine POC (C4 vegetation) were associated with periods of marine regression, i.e. increased freshwater, whereas marine transgression events were associated with low organic content and marine POC and DOC. This is comparable to studies conducted in Uruguay (South America) where palaeo-salinity was related to trophic status, i.e. increased freshwater input was associated with high nutrients. Comparisons of the palaeo-record with recorded historical occurrences of droughts and floods, also provided a means of assessing the sedimentary record and to infer anthropogenic impacts after 1850 AD. Overall it can be concluded that coastal lakes of both continents in the Southern Hemisphere displayed similar trophic responses to sea-level fluctuations during the Holocene. This adds valuable information to global sea-level change models.
- Full Text:
- Date Issued: 2012
- Authors: Gordon, Nuette
- Date: 2012
- Subjects: Limnology -- South Africa
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:10619 , http://hdl.handle.net/10948/d1009430 , Limnology -- South Africa
- Description: As climatic conditions continue to change globally, there is a need to assess past environmental change in relation to changing water balance, temperature and sea-level. By understanding the extent of past environmental change, and how anthropogenic impacts have affected ecosystems, better and more accurate future predictions of change can be made. Through the use of the sedimentary record within coastal wetlands, geochemical, (organic content and stable isotopes) and biological (diatoms) proxies were utilised to determine; (i) the baseline water quality record for Soetendalsvlei, one of only a few coastal lakes in South Africa, (ii) the effect of agriculture and mouth manipulation of the Heuningnes Estuary on the microalgae ecology and (iii) the link between palaeo-salinity and trophic status on a regional basis between Soetendalsvlei and Groenvlei, situated 320 km apart. Present water quality and phytoplankton biomass and community structure were assessed for Soetendalsvlei and its associated wetlands, Voëlvlei and Waskraalsvlei to determine the current health of these systems and to obtain modern diatom analogues to be used in the palaeolimnological reconstruction of the coastal lake. Diatoms were not dominant during this study period. Chlorophytes and flagellates were the dominant phytoplankton groups throughout the different wetlands. With the exception of Voëlvlei, the wetlands were all in good health, although SRP concentrations were within the eutrophic to hypertrophic range and are cause for concern. In Voëlvlei, phytoplankton biomass was within the eutrophic range with chlorophyll a concentrations ranging between 20 – 400 ug.l-1 Cyanobacteria, a further indicator of eutrophic conditions, were dominant during the warmer summer periods. Rainfall and freshwater inflow had a significant effect on the biomass and composition of the phytoplankton and acted as a resetting mechanism for all the wetlands as water quality conditions improved thereafter. Comparisons of the water quality and phytoplankton community between the upper reaches of the Heuningnes Estuary and Soetendalsvlei, indicated that artificial breaching of the estuary mouth significantly impacted the connectivity between these two systems, with marine intrusion extending into the upper reaches, while freshwater conditions dominate in the coastal lake. Unfortunately for the palaeolimnological study diatom preservation was poor, however, geochemistry and stable isotope analyses did provide adequate evidence of marine transgression (~8000 yr BP and 4000-2000 yr BP) and regression events comparable to other South African sea-level models developed for the east and west coast. High organic matter content (i.e. higher trophic state) and estuarine POC (C4 vegetation) were associated with periods of marine regression, i.e. increased freshwater, whereas marine transgression events were associated with low organic content and marine POC and DOC. This is comparable to studies conducted in Uruguay (South America) where palaeo-salinity was related to trophic status, i.e. increased freshwater input was associated with high nutrients. Comparisons of the palaeo-record with recorded historical occurrences of droughts and floods, also provided a means of assessing the sedimentary record and to infer anthropogenic impacts after 1850 AD. Overall it can be concluded that coastal lakes of both continents in the Southern Hemisphere displayed similar trophic responses to sea-level fluctuations during the Holocene. This adds valuable information to global sea-level change models.
- Full Text:
- Date Issued: 2012
Land use/cover change modelling and land degradation assessment in the Keiskamma catchment using remote sensing and GIS
- Authors: Mhangara, Paidamwoyo
- Date: 2011
- Subjects: Land use -- South Africa -- Eastern Cape , Land degradation -- South Africa -- Eastern Cape , Keiskamma River (South Africa)
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:10647 , http://hdl.handle.net/10948/1467 , Land use -- South Africa -- Eastern Cape , Land degradation -- South Africa -- Eastern Cape , Keiskamma River (South Africa)
- Description: Land degradation in most communal parts of the Keiskamma catchment has reached alarming proportions. The Keiskamma catchment is particularly predisposed to severe land degradation associated with soil erosion, thicket degradation and deteriorating riparian vegetation. There is a close coupling between land use/cover dynamics and degradation trends witnessed in the catchment. Soil erosion is prevalent in most of the communal areas in the catchment. The principal aim of this study was to investigate land use/cover trends, model the spatial patterns of soil loss and predict future land use/cover scenarios as a means of assessing land degradation in the Keiskamma catchment. Multi-temporal Landsat satellite imagery from 1972 to 2006 was used for land use/cover change analyses using object-oriented post-classification comparison. Fragmentation analysis was performed by computing and analyzing landscape metrics in the riparian and adjacent hillslope areas to determine the land cover structural changes that have occurred since 1972. The landscape function analysis was used to validate the current rangeland conditions in the communal areas and the former commercial farms. The current condition of the riparian zones and proximal hillslopes was assessed using the Rapid Appraisal of Riparian Condition and future land use/cover scenarios were simulated using the Markovcellular automata model. Spatial patterns of soil loss in the Keiskamma catchment were determined using the Sediment Assessment Tool for Effective Erosion Control (SATEEC), which is a GIS based RUSLE model that integrates sediment delivery ratios. Object oriented classification was used to map soil erosion surfaces and valley infill in ephemeral stream channels as a means of demonstrating the major sediment transfer processes operating in the Keiskamma catchment. The Mahalanobis distance method was used to compute the topographic thresholds for gully erosion. To understand the effect of soil characteristics in severe forms of erosion, laboratory analyses were undertaken to determine the physico-chemical soil properties. iv The temporal land use/cover analysis done using the post-classification change detection indicated that intact vegetation has undergone a significant decline from 1972 to 2006. The temporal changes within the intermediate years are characterized by cyclic transitions of decline and recovery of intact vegetation. An overall decline in intact vegetation cover, an increase in degraded vegetation and bare eroded soil was noted. Fragmentation analyses done in the communal villages of the central Keiskamma catchment indicated increasing vegetation fragmentation manifested by an increase in smaller and less connected vegetation patches, and a subsequent increase of bare and degraded soil patches which are much bigger and more connected. The Landscape Organisation Index revealed very low vegetation connectivity in the communal rangelands that have weak local traditional institutions. Fragmentation analyses in the riparian and proximal hillslopes revealed evidence of increasing vegetation fragmentation from 1972 to 2006. The Markov Cellular Automata simulation predicted a decline in intact vegetation and an increase in bare and degraded soil in 2019. The Keiskamma catchment was noted as experiencing high rates of soil loss that are above provincial and national averages. The classification of erosion features and valley infill showcased the vegetation enrichment in the ephemeral streams which is occurring at the expense of high soil losses from severe gully erosion on the hillslopes. This in turn has led to an inversion of grazing patterns within the catchment, such that grazing is now concentrated within the ephemeral stream channels. Soil chemical analyses revealed a high sodium content and low soluble salt concentration, which promote soil dispersion, piping and gully erosion. The presence of high amounts of illite-smectite in the catchment also accounts for the highly dispersive nature of the soil even at low SAR values. Significant amounts of swelling 2:1 silicate clays such as smectites cause cracking and contribute to the development of piping and gullying in the catchment. Given the worsening degradation trends in the communal areas, a systematic re-allocation of state land in sections of the catchment that belonged to the former commercial farms is recommended to alleviate anthropogenic pressure. Strengthening local institutions that effectively monitor and manage natural resources will be required in order to maintain v optimum flow regimes in rivers and curb thicket degradation. Measures to curb environmental degradation in the Keiskamma catchment should encompass suitable ecological interventions that are sensitive to the socio-economic challenges facing the people in communal areas.
- Full Text:
- Date Issued: 2011
- Authors: Mhangara, Paidamwoyo
- Date: 2011
- Subjects: Land use -- South Africa -- Eastern Cape , Land degradation -- South Africa -- Eastern Cape , Keiskamma River (South Africa)
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:10647 , http://hdl.handle.net/10948/1467 , Land use -- South Africa -- Eastern Cape , Land degradation -- South Africa -- Eastern Cape , Keiskamma River (South Africa)
- Description: Land degradation in most communal parts of the Keiskamma catchment has reached alarming proportions. The Keiskamma catchment is particularly predisposed to severe land degradation associated with soil erosion, thicket degradation and deteriorating riparian vegetation. There is a close coupling between land use/cover dynamics and degradation trends witnessed in the catchment. Soil erosion is prevalent in most of the communal areas in the catchment. The principal aim of this study was to investigate land use/cover trends, model the spatial patterns of soil loss and predict future land use/cover scenarios as a means of assessing land degradation in the Keiskamma catchment. Multi-temporal Landsat satellite imagery from 1972 to 2006 was used for land use/cover change analyses using object-oriented post-classification comparison. Fragmentation analysis was performed by computing and analyzing landscape metrics in the riparian and adjacent hillslope areas to determine the land cover structural changes that have occurred since 1972. The landscape function analysis was used to validate the current rangeland conditions in the communal areas and the former commercial farms. The current condition of the riparian zones and proximal hillslopes was assessed using the Rapid Appraisal of Riparian Condition and future land use/cover scenarios were simulated using the Markovcellular automata model. Spatial patterns of soil loss in the Keiskamma catchment were determined using the Sediment Assessment Tool for Effective Erosion Control (SATEEC), which is a GIS based RUSLE model that integrates sediment delivery ratios. Object oriented classification was used to map soil erosion surfaces and valley infill in ephemeral stream channels as a means of demonstrating the major sediment transfer processes operating in the Keiskamma catchment. The Mahalanobis distance method was used to compute the topographic thresholds for gully erosion. To understand the effect of soil characteristics in severe forms of erosion, laboratory analyses were undertaken to determine the physico-chemical soil properties. iv The temporal land use/cover analysis done using the post-classification change detection indicated that intact vegetation has undergone a significant decline from 1972 to 2006. The temporal changes within the intermediate years are characterized by cyclic transitions of decline and recovery of intact vegetation. An overall decline in intact vegetation cover, an increase in degraded vegetation and bare eroded soil was noted. Fragmentation analyses done in the communal villages of the central Keiskamma catchment indicated increasing vegetation fragmentation manifested by an increase in smaller and less connected vegetation patches, and a subsequent increase of bare and degraded soil patches which are much bigger and more connected. The Landscape Organisation Index revealed very low vegetation connectivity in the communal rangelands that have weak local traditional institutions. Fragmentation analyses in the riparian and proximal hillslopes revealed evidence of increasing vegetation fragmentation from 1972 to 2006. The Markov Cellular Automata simulation predicted a decline in intact vegetation and an increase in bare and degraded soil in 2019. The Keiskamma catchment was noted as experiencing high rates of soil loss that are above provincial and national averages. The classification of erosion features and valley infill showcased the vegetation enrichment in the ephemeral streams which is occurring at the expense of high soil losses from severe gully erosion on the hillslopes. This in turn has led to an inversion of grazing patterns within the catchment, such that grazing is now concentrated within the ephemeral stream channels. Soil chemical analyses revealed a high sodium content and low soluble salt concentration, which promote soil dispersion, piping and gully erosion. The presence of high amounts of illite-smectite in the catchment also accounts for the highly dispersive nature of the soil even at low SAR values. Significant amounts of swelling 2:1 silicate clays such as smectites cause cracking and contribute to the development of piping and gullying in the catchment. Given the worsening degradation trends in the communal areas, a systematic re-allocation of state land in sections of the catchment that belonged to the former commercial farms is recommended to alleviate anthropogenic pressure. Strengthening local institutions that effectively monitor and manage natural resources will be required in order to maintain v optimum flow regimes in rivers and curb thicket degradation. Measures to curb environmental degradation in the Keiskamma catchment should encompass suitable ecological interventions that are sensitive to the socio-economic challenges facing the people in communal areas.
- Full Text:
- Date Issued: 2011
The development and evaluation of gaze selection techniques
- Authors: Van Tonder, Martin Stephen
- Date: 2009
- Subjects: Human-computer interaction , User interfaces (Computer systems) , Gaze
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:10469 , http://hdl.handle.net/10948/882 , Human-computer interaction , User interfaces (Computer systems) , Gaze
- Description: Eye gaze interaction enables users to interact with computers using their eyes. A wide variety of eye gaze interaction techniques have been developed to support this type of interaction. Gaze selection techniques, a class of eye gaze interaction techniques which support target selection, are the subject of this research. Researchers developing these techniques face a number of challenges. The most significant challenge is the limited accuracy of eye tracking equipment (due to the properties of the human eye). The design of gaze selection techniques is dominated by this constraint. Despite decades of research, existing techniques are still significantly less accurate than the mouse. A recently developed technique, EyePoint, represents the state of the art in gaze selection techniques. EyePoint combines gaze input with keyboard input. Evaluation results for this technique are encouraging, but accuracy is still a concern. Early trigger errors, resulting from users triggering a selection before looking at the intended target, were found to be the most commonly occurring errors for this technique. The primary goal of this research was to improve the usability of gaze selection techniques. In order to achieve this goal, novel gaze selection techniques were developed. New techniques were developed by combining elements of existing techniques in novel ways. Seven novel gaze selection techniques were developed. Three of these techniques were selected for evaluation. A software framework was developed for implementing and evaluating gaze selection techniques. This framework was used to implement the gaze selection techniques developed during this research. Implementing and evaluating all of the techniques using a common framework ensured consistency when comparing the techniques. The novel techniques which were developed were evaluated against EyePoint and the mouse using the framework. The three novel techniques evaluated were named TargetPoint, StaggerPoint and ScanPoint. TargetPoint combines motor space expansion with a visual feedback highlight whereas the StaggerPoint and TargetPoint designs explore novel approaches to target selection disambiguation. A usability evaluation of the three novel techniques alongside EyePoint and the mouse revealed some interesting trends. TargetPoint was found to be more usable and accurate than EyePoint. This novel technique also proved more popular with test participants. One aspect of TargetPoint which proved particularly popular was the visual feedback highlight, a feature which was found to be a more effective method of combating early trigger errors than existing approaches. StaggerPoint was more efficient than EyePoint, but was less effective and satisfying. ScanPoint was the least popular technique. The benefits of providing a visual feedback highlight and test participants' positive views thereof contradict views expressed in existing research regarding the usability of visual feedback. These results have implications for the design of future gaze selection techniques. A set of design principles was developed for designing new gaze selection techniques. The designers of gaze selection techniques can benefit from these design principles by applying them to their techniques
- Full Text:
- Date Issued: 2009
- Authors: Van Tonder, Martin Stephen
- Date: 2009
- Subjects: Human-computer interaction , User interfaces (Computer systems) , Gaze
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:10469 , http://hdl.handle.net/10948/882 , Human-computer interaction , User interfaces (Computer systems) , Gaze
- Description: Eye gaze interaction enables users to interact with computers using their eyes. A wide variety of eye gaze interaction techniques have been developed to support this type of interaction. Gaze selection techniques, a class of eye gaze interaction techniques which support target selection, are the subject of this research. Researchers developing these techniques face a number of challenges. The most significant challenge is the limited accuracy of eye tracking equipment (due to the properties of the human eye). The design of gaze selection techniques is dominated by this constraint. Despite decades of research, existing techniques are still significantly less accurate than the mouse. A recently developed technique, EyePoint, represents the state of the art in gaze selection techniques. EyePoint combines gaze input with keyboard input. Evaluation results for this technique are encouraging, but accuracy is still a concern. Early trigger errors, resulting from users triggering a selection before looking at the intended target, were found to be the most commonly occurring errors for this technique. The primary goal of this research was to improve the usability of gaze selection techniques. In order to achieve this goal, novel gaze selection techniques were developed. New techniques were developed by combining elements of existing techniques in novel ways. Seven novel gaze selection techniques were developed. Three of these techniques were selected for evaluation. A software framework was developed for implementing and evaluating gaze selection techniques. This framework was used to implement the gaze selection techniques developed during this research. Implementing and evaluating all of the techniques using a common framework ensured consistency when comparing the techniques. The novel techniques which were developed were evaluated against EyePoint and the mouse using the framework. The three novel techniques evaluated were named TargetPoint, StaggerPoint and ScanPoint. TargetPoint combines motor space expansion with a visual feedback highlight whereas the StaggerPoint and TargetPoint designs explore novel approaches to target selection disambiguation. A usability evaluation of the three novel techniques alongside EyePoint and the mouse revealed some interesting trends. TargetPoint was found to be more usable and accurate than EyePoint. This novel technique also proved more popular with test participants. One aspect of TargetPoint which proved particularly popular was the visual feedback highlight, a feature which was found to be a more effective method of combating early trigger errors than existing approaches. StaggerPoint was more efficient than EyePoint, but was less effective and satisfying. ScanPoint was the least popular technique. The benefits of providing a visual feedback highlight and test participants' positive views thereof contradict views expressed in existing research regarding the usability of visual feedback. These results have implications for the design of future gaze selection techniques. A set of design principles was developed for designing new gaze selection techniques. The designers of gaze selection techniques can benefit from these design principles by applying them to their techniques
- Full Text:
- Date Issued: 2009
Leonotis leonurus: the anticoagulant and antidiabetic activity of Leonotis leonurus
- Authors: Mnonopi, Nandipha
- Date: 2010
- Subjects: Medicinal plants -- South Africa , Materia medica, Vegetable -- South Africa , Diabetes -- Alternative treatment -- South Africa , Plant bioactive compounds , Leonotis leonurus -- Physiological aspects
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:10323 , http://hdl.handle.net/10948/1194 , Medicinal plants -- South Africa , Materia medica, Vegetable -- South Africa , Diabetes -- Alternative treatment -- South Africa , Plant bioactive compounds , Leonotis leonurus -- Physiological aspects
- Description: Commercial marrubiin, aqueous and organic extracts of Leonotis leonurus were tested in vitro for their anticoagulant and antiplatelet activities. The aqueous extract inhibited platelet aggregation by 69.5 percent (100 μg/mL), while the organic extract (100 μg/mL) and marrubiin (5 μg/mL) showed 92.5 percent and 91.6 percent inhibition, respectively, by inhibiting the binding of fibrinogen to glycoprotein IIb/IIIa receptor in a concentration dependent manner. The extracts significantly prolonged activated partial thromboplastin time compared to untreated plasma controls. Fibrin and D-Dimer formation were drastically decreased. The extracts and marrubiin concentration-dependently inhibited calcium mobilization induced by collagen and thrombin. The formation of thromboxane A2 was also significantly reduced by both the extracts and marrubiin. Protein secretion and platelet adhesion were significantly reduced by both the extracts and marrubiin. The organic extract and marrubiin showed a more pronounced effect than the aqueous extracts in all the in vitro assays. The ex-vivo animal model confirmed the results obtained in vitro. Similar to the in vitro studies, activated partial thromboplastin time clotting time was prolonged by marrubiin and the number of aggregated platelets were significantly reduced relative to aspirin. The findings reflect that marrubiin largely contributes to the organic extract's anticoagulant and antiplatelet effect in vitro. INS-1 cells were cultured under normo- and hyperglycaemic conditions. Marrubiin and the two Leonotis leonurus extracts were screened for anti-diabetic activity in vitro. The stimulatory index of INS-1 cells cultured under hyperglycaemic conditions was significantly increased by 60 percent and 61 percent (p<0.01; n=5) in cells exposed to the organic extract (10 μg/mL) and marrubiin (500 ng/mL), respectively, relative to the normoglycaemic conditions. The gene expression of insulin was significantly increased by 76.5 and 71 percent, and of glucose transporter-2 by 93 and 92.5 percent for marrubiin and the organic extract, respectively, under the same conditions stipulated above (p<0.01; n=4). The extract and marrubiin similarly showed an increase in respiratory rate under hyperglycaemic conditions. Marrubiin increased insulin secretion, HDL-cholesterol, while it decreased total cholesterol, LDL-cholesterol and the atherogenic index in the in vivo rat model.
- Full Text:
- Date Issued: 2010
- Authors: Mnonopi, Nandipha
- Date: 2010
- Subjects: Medicinal plants -- South Africa , Materia medica, Vegetable -- South Africa , Diabetes -- Alternative treatment -- South Africa , Plant bioactive compounds , Leonotis leonurus -- Physiological aspects
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:10323 , http://hdl.handle.net/10948/1194 , Medicinal plants -- South Africa , Materia medica, Vegetable -- South Africa , Diabetes -- Alternative treatment -- South Africa , Plant bioactive compounds , Leonotis leonurus -- Physiological aspects
- Description: Commercial marrubiin, aqueous and organic extracts of Leonotis leonurus were tested in vitro for their anticoagulant and antiplatelet activities. The aqueous extract inhibited platelet aggregation by 69.5 percent (100 μg/mL), while the organic extract (100 μg/mL) and marrubiin (5 μg/mL) showed 92.5 percent and 91.6 percent inhibition, respectively, by inhibiting the binding of fibrinogen to glycoprotein IIb/IIIa receptor in a concentration dependent manner. The extracts significantly prolonged activated partial thromboplastin time compared to untreated plasma controls. Fibrin and D-Dimer formation were drastically decreased. The extracts and marrubiin concentration-dependently inhibited calcium mobilization induced by collagen and thrombin. The formation of thromboxane A2 was also significantly reduced by both the extracts and marrubiin. Protein secretion and platelet adhesion were significantly reduced by both the extracts and marrubiin. The organic extract and marrubiin showed a more pronounced effect than the aqueous extracts in all the in vitro assays. The ex-vivo animal model confirmed the results obtained in vitro. Similar to the in vitro studies, activated partial thromboplastin time clotting time was prolonged by marrubiin and the number of aggregated platelets were significantly reduced relative to aspirin. The findings reflect that marrubiin largely contributes to the organic extract's anticoagulant and antiplatelet effect in vitro. INS-1 cells were cultured under normo- and hyperglycaemic conditions. Marrubiin and the two Leonotis leonurus extracts were screened for anti-diabetic activity in vitro. The stimulatory index of INS-1 cells cultured under hyperglycaemic conditions was significantly increased by 60 percent and 61 percent (p<0.01; n=5) in cells exposed to the organic extract (10 μg/mL) and marrubiin (500 ng/mL), respectively, relative to the normoglycaemic conditions. The gene expression of insulin was significantly increased by 76.5 and 71 percent, and of glucose transporter-2 by 93 and 92.5 percent for marrubiin and the organic extract, respectively, under the same conditions stipulated above (p<0.01; n=4). The extract and marrubiin similarly showed an increase in respiratory rate under hyperglycaemic conditions. Marrubiin increased insulin secretion, HDL-cholesterol, while it decreased total cholesterol, LDL-cholesterol and the atherogenic index in the in vivo rat model.
- Full Text:
- Date Issued: 2010
High performance nonwovens in technical textile applications
- Ogunleye, Christopher Olarinde
- Authors: Ogunleye, Christopher Olarinde
- Date: 2013
- Subjects: Nonwoven fabrics , Textile fabrics -- Technological innovations
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:10356 , http://hdl.handle.net/10948/d1021011
- Description: The aim of this research was to establish the optimum processing conditions and parameters for producing nonwoven fabrics best suited for application in disposable and protective wear for surgical gowns, drapes and laboratory coats. Carded and crosslapped webs, of three basic weights (80, 120, and 150g/m2), from greige (unscoured and unbleached) cotton, viscose and polyester fibres, were hydroentangled, using three different waterjet pressures (60, 100 and 120 bars), on a Fleissner Aquajet hydroentanglement machine. An antibacterial agent (Ruco-Coat FC 9005) and a fluorochemical water repellent agent (Ruco Bac-AGP), were applied in one bath using the pad-dry-cure technique, to impart both antibacterial and water repellent properties to the fabrics, SEM photomicrographs indicating that the finished polymers were evenly dispersed on the fabric surface. The effect of waterjet pressure, fabric weight and type and treatment on the structure of the nonwoven produced, was evaluated by measuring the relevant characteristics of the fabrics. As expected, there was an interrelationship between fabric weight, thickness, and density, the fabric thickness and mass density increasing with fabric weight. An increase in waterjet pressure decreased the fabric thickness and increased the fabric density. The water repellent and antibacterial treatment increased the fabric weight and thickness. The antimicrobial activity of the fabrics was assessed by determining the percentage reduction in Staphylococcus aureus and Escherichia coli bacteria population. The maximum percent reduction at 24hrs contact time for both bacteria ranged from 99.5 to 99.6 percent for all the fabric types. The standard spray test ratings for the three treated fabrics ranged from 80-90 percent, whereas that of the untreated water repellent fabric was zero, while the contact angles for all the fabric types exceeded 90 degrees, indicating good resistance to wetting. It was found that the tensile strength of the fabric in the cross-machine direction was higher than that in the machine direction, for both the treated and untreated fabrics, with the tensile strengths in both the MD and CD of the treated fabrics were greater than that of the untreated fabrics, the reverse being true for the extension at break. An increase in waterjet pressure increased the tensile strength but decreased the extension at break, for both the treated and untreated fabrics. The finishing treatment decreased the mean pore size of all the fabrics, the mean pore size decreasing with an increase in fabric weight and waterjet pressure. An increase in waterjet pressure and fabric weight decreased the air and water vapour permeability, as did the finishing treatment, although the differences were not always statistically significant. The polyester fabrics had the highest water and air permeability. Hence low weight fabrics of 80 g/m2, which were hydroentangled at low water jet pressures of 60 bars, were suitable for use in this study due to their higher air and water vapour permeability as well as higher pore size distribution. These group of fabrics thus meet the requirements for surgical gowns, drapes, nurses’ uniforms and laboratory coats.
- Full Text:
- Date Issued: 2013
- Authors: Ogunleye, Christopher Olarinde
- Date: 2013
- Subjects: Nonwoven fabrics , Textile fabrics -- Technological innovations
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:10356 , http://hdl.handle.net/10948/d1021011
- Description: The aim of this research was to establish the optimum processing conditions and parameters for producing nonwoven fabrics best suited for application in disposable and protective wear for surgical gowns, drapes and laboratory coats. Carded and crosslapped webs, of three basic weights (80, 120, and 150g/m2), from greige (unscoured and unbleached) cotton, viscose and polyester fibres, were hydroentangled, using three different waterjet pressures (60, 100 and 120 bars), on a Fleissner Aquajet hydroentanglement machine. An antibacterial agent (Ruco-Coat FC 9005) and a fluorochemical water repellent agent (Ruco Bac-AGP), were applied in one bath using the pad-dry-cure technique, to impart both antibacterial and water repellent properties to the fabrics, SEM photomicrographs indicating that the finished polymers were evenly dispersed on the fabric surface. The effect of waterjet pressure, fabric weight and type and treatment on the structure of the nonwoven produced, was evaluated by measuring the relevant characteristics of the fabrics. As expected, there was an interrelationship between fabric weight, thickness, and density, the fabric thickness and mass density increasing with fabric weight. An increase in waterjet pressure decreased the fabric thickness and increased the fabric density. The water repellent and antibacterial treatment increased the fabric weight and thickness. The antimicrobial activity of the fabrics was assessed by determining the percentage reduction in Staphylococcus aureus and Escherichia coli bacteria population. The maximum percent reduction at 24hrs contact time for both bacteria ranged from 99.5 to 99.6 percent for all the fabric types. The standard spray test ratings for the three treated fabrics ranged from 80-90 percent, whereas that of the untreated water repellent fabric was zero, while the contact angles for all the fabric types exceeded 90 degrees, indicating good resistance to wetting. It was found that the tensile strength of the fabric in the cross-machine direction was higher than that in the machine direction, for both the treated and untreated fabrics, with the tensile strengths in both the MD and CD of the treated fabrics were greater than that of the untreated fabrics, the reverse being true for the extension at break. An increase in waterjet pressure increased the tensile strength but decreased the extension at break, for both the treated and untreated fabrics. The finishing treatment decreased the mean pore size of all the fabrics, the mean pore size decreasing with an increase in fabric weight and waterjet pressure. An increase in waterjet pressure and fabric weight decreased the air and water vapour permeability, as did the finishing treatment, although the differences were not always statistically significant. The polyester fabrics had the highest water and air permeability. Hence low weight fabrics of 80 g/m2, which were hydroentangled at low water jet pressures of 60 bars, were suitable for use in this study due to their higher air and water vapour permeability as well as higher pore size distribution. These group of fabrics thus meet the requirements for surgical gowns, drapes, nurses’ uniforms and laboratory coats.
- Full Text:
- Date Issued: 2013
Modelling the hydrological responses to changes in land use and cover in the Malaba River Catchment, Eastern Uganda
- Authors: Barasa, Bernard
- Date: 2014
- Subjects: Hydrologic models -- Uganda , Runoff -- Uganda
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:10670 , http://hdl.handle.net/10948/d1020153
- Description: Hydrological responses vary from one catchment to another, depending on the nature of land use and cover changes. Modelling the hydrological responses to changes in land use and cover at different catchment spatial scales was the major focus of this study. This study assessed the hydrological responses attributed to changes in land use and extreme weather events resulting into increased sediment loading/concentration, rainfall-runoff generation/volume, streamflow fluctuation and modification of the river channel in the Malaba River Catchment, Eastern Uganda. The hydrological responses were assessed using hydrological models (IHACRES, SCS CN, and SHETRAN) to examine the effect of land use on soil physio-chemical properties susceptibility to rainfall-runoff generation and volume, frequency and severity of extreme weather events, changes in streamflow variations, sediment loading/concentration and river channel morphology. The preliminary study results showed that the frequency of extreme weather events reduced from 4-10 to 1-3 years over the catchment. The performance of the IHACRES model with a Nash-Sutcliffe Efficiency (NSE) of 0.89 showed that streamflow comparatively corresponded with the results obtained the drought indices in predicting the recorded events of severe drought (2005) and flood (1997). Changes in land use and cover types showed that the highest change in the gain of land was experienced from the agricultural land use (36.7 percent), and tropical forest (regeneration) (2.2 percent). The biggest losses in land were experienced in the wetlands (24.6 percent) and bushland and thickets (15.3 percent) land cover types. The SHETRAN model calibrated period had a NSE of 0.78 and 0.81 in the validation period showed satisfactory fits between the measured and simulated streamflow. The agricultural land use (crop growing) had a higher influence on the rainfall-runoff generation and increase in the streamflow than the tropical forest, and bushland cover types in the simulated period. Similarly, the curve number model estimated a comparatively higher surface rainfall-runoff volume generated from the agricultural land use (crop growing) (71,740 m3) than in the bushlands and thickets (42,872 m3) from a rainstorm followed by the tropical forest cover type. This was also reflected in the lower rates of saturated hydraulic conductivity from the agricultural land use (crop growing). The study also showed that human-induced sediment loading due to gold mining activities contributed a much higher impact on the concentration of suspended sediments and streamflow than sediments from rainfall-runoff from the sampled streams. The main contributor of human-induced sediments to the Malaba River were Nankuke River (130.6kg/annum), followed by Omanyi River (70.6kg/annum), and Nabewo River (66.8kg/annum). Human-induced sediment loading had a profound impact on the streamflow variations both in the dry and wet seasons from the sampled tributaries. Lastly, in regard to the effect of land use and cover types on the river channel morphology, tree plantation (cohesion=12, angle of internal friction=27) and bushland and thickets (cohesion=14, angle of internal friction=22) cover types had the most stable river banks compared to the wetland and agricultural land use and cover types that exhibited higher levels of sediment concentration.
- Full Text:
- Date Issued: 2014
- Authors: Barasa, Bernard
- Date: 2014
- Subjects: Hydrologic models -- Uganda , Runoff -- Uganda
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:10670 , http://hdl.handle.net/10948/d1020153
- Description: Hydrological responses vary from one catchment to another, depending on the nature of land use and cover changes. Modelling the hydrological responses to changes in land use and cover at different catchment spatial scales was the major focus of this study. This study assessed the hydrological responses attributed to changes in land use and extreme weather events resulting into increased sediment loading/concentration, rainfall-runoff generation/volume, streamflow fluctuation and modification of the river channel in the Malaba River Catchment, Eastern Uganda. The hydrological responses were assessed using hydrological models (IHACRES, SCS CN, and SHETRAN) to examine the effect of land use on soil physio-chemical properties susceptibility to rainfall-runoff generation and volume, frequency and severity of extreme weather events, changes in streamflow variations, sediment loading/concentration and river channel morphology. The preliminary study results showed that the frequency of extreme weather events reduced from 4-10 to 1-3 years over the catchment. The performance of the IHACRES model with a Nash-Sutcliffe Efficiency (NSE) of 0.89 showed that streamflow comparatively corresponded with the results obtained the drought indices in predicting the recorded events of severe drought (2005) and flood (1997). Changes in land use and cover types showed that the highest change in the gain of land was experienced from the agricultural land use (36.7 percent), and tropical forest (regeneration) (2.2 percent). The biggest losses in land were experienced in the wetlands (24.6 percent) and bushland and thickets (15.3 percent) land cover types. The SHETRAN model calibrated period had a NSE of 0.78 and 0.81 in the validation period showed satisfactory fits between the measured and simulated streamflow. The agricultural land use (crop growing) had a higher influence on the rainfall-runoff generation and increase in the streamflow than the tropical forest, and bushland cover types in the simulated period. Similarly, the curve number model estimated a comparatively higher surface rainfall-runoff volume generated from the agricultural land use (crop growing) (71,740 m3) than in the bushlands and thickets (42,872 m3) from a rainstorm followed by the tropical forest cover type. This was also reflected in the lower rates of saturated hydraulic conductivity from the agricultural land use (crop growing). The study also showed that human-induced sediment loading due to gold mining activities contributed a much higher impact on the concentration of suspended sediments and streamflow than sediments from rainfall-runoff from the sampled streams. The main contributor of human-induced sediments to the Malaba River were Nankuke River (130.6kg/annum), followed by Omanyi River (70.6kg/annum), and Nabewo River (66.8kg/annum). Human-induced sediment loading had a profound impact on the streamflow variations both in the dry and wet seasons from the sampled tributaries. Lastly, in regard to the effect of land use and cover types on the river channel morphology, tree plantation (cohesion=12, angle of internal friction=27) and bushland and thickets (cohesion=14, angle of internal friction=22) cover types had the most stable river banks compared to the wetland and agricultural land use and cover types that exhibited higher levels of sediment concentration.
- Full Text:
- Date Issued: 2014
Single-end reflectometric measurements of polarization-mode dispersion in single-mode optical fibres
- Authors: Fosuhene, Samuel Kofi
- Date: 2013
- Subjects: Fiber optics , Polarization (Light) , Optical measurements
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10948/6280 , vital:21069
- Description: In this thesis two novel single-end methods are applied to measure and characterize polarization mode dispersion in single mode optical fibres. Polarization mode dispersion (PMD) is an important factor negatively affecting the successful implementation of high speed long haul optical fibre networks operating at bit rates of 10Gb/s and above. PMD measurements are thus important for quality control during manufacturing and cabling processes. It is also useful for network operators planning to upgrade bitrates in existing networks to 10Gb/s and beyond. In an optical fibre link, sections with particularly high PMD may act to increase the entire PMD of the link. Identifying and replacing such sections can greatly reduce the PMD of the link. PMD measurements can be forward or single-end. In forward measurements, both ends of the fibre are used for input and detection. In single-end configuration, only one end of the fibre is used. For this reason, single-end measurements are more practical for the field where fibre ends are situated several kilometres apart. Single-end techniques can be implemented with a continuous wave for non-local PMD measurements (by Fresnel reflection). If a pulsed wave is used, local measurements can be achieved (by total power due to Rayleigh scattering). Two single-end schemes, one based on Fresnel reflection and the other due to Rayleigh scattering have been applied to measure non-local and local PMD of standard single mode optical fibres. For the non-local PMD measurements, the general interferometric technique (GINTY) was modified to operate in a round-trip configuration. In this configuration, the fibre was treated as a concatenation of two identical fibre segments. Three different sets of fibres were investigated, each set representing a particular mode coupling regime. For polarization maintaining fibres, (PMFs), with no mode coupling, a factor of two was found between forward and single-end measurements. For long single mode fibres in the long length regime, the factor was 1.4. For a combination of PMF and single mode fibres, a factor of 1.6 was obtained. The method which is accurate, repeatable, low cost and robust is very suitable for field applications. The second method is the polarization optical time domain reflectometric (P-OTDR) technique. This technique performs local birefringence measurements by measuring the evolution of the states of polarization (SOP). The birefringence information from such measurements was extracted and analysed to characterise four different fibres. Beat lengths and correlation lengths extracted from the P-OTDR were used to calculate the differential group delay (DGD) of the fibres. Next an expression for the root-mean-square differential group delay was derived and applied to the birefringence measurements to calculate the DGDs at a single wavelength. This method which operates at a single wavelength has a huge advantage. Firstly it is able to measure completely all the fibre characteristic parameters. Secondly it can measure mean DGD, root mean square DGD and instantaneous DGD. A plot of instantaneous DGD vs. length enables one to identify and eliminate sections with particularly high DGD. Finally since the P-OTDR system operates with a single wavelength, real time monitoring of PMD is possible via multiplexing. The results obtained are repeatable, accurate and are in good agreement with the standard Jones Matrix Eigenanalysis (JME) technique.
- Full Text:
- Date Issued: 2013
Single-end reflectometric measurements of polarization-mode dispersion in single-mode optical fibres
- Authors: Fosuhene, Samuel Kofi
- Date: 2013
- Subjects: Fiber optics , Polarization (Light) , Optical measurements
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10948/6280 , vital:21069
- Description: In this thesis two novel single-end methods are applied to measure and characterize polarization mode dispersion in single mode optical fibres. Polarization mode dispersion (PMD) is an important factor negatively affecting the successful implementation of high speed long haul optical fibre networks operating at bit rates of 10Gb/s and above. PMD measurements are thus important for quality control during manufacturing and cabling processes. It is also useful for network operators planning to upgrade bitrates in existing networks to 10Gb/s and beyond. In an optical fibre link, sections with particularly high PMD may act to increase the entire PMD of the link. Identifying and replacing such sections can greatly reduce the PMD of the link. PMD measurements can be forward or single-end. In forward measurements, both ends of the fibre are used for input and detection. In single-end configuration, only one end of the fibre is used. For this reason, single-end measurements are more practical for the field where fibre ends are situated several kilometres apart. Single-end techniques can be implemented with a continuous wave for non-local PMD measurements (by Fresnel reflection). If a pulsed wave is used, local measurements can be achieved (by total power due to Rayleigh scattering). Two single-end schemes, one based on Fresnel reflection and the other due to Rayleigh scattering have been applied to measure non-local and local PMD of standard single mode optical fibres. For the non-local PMD measurements, the general interferometric technique (GINTY) was modified to operate in a round-trip configuration. In this configuration, the fibre was treated as a concatenation of two identical fibre segments. Three different sets of fibres were investigated, each set representing a particular mode coupling regime. For polarization maintaining fibres, (PMFs), with no mode coupling, a factor of two was found between forward and single-end measurements. For long single mode fibres in the long length regime, the factor was 1.4. For a combination of PMF and single mode fibres, a factor of 1.6 was obtained. The method which is accurate, repeatable, low cost and robust is very suitable for field applications. The second method is the polarization optical time domain reflectometric (P-OTDR) technique. This technique performs local birefringence measurements by measuring the evolution of the states of polarization (SOP). The birefringence information from such measurements was extracted and analysed to characterise four different fibres. Beat lengths and correlation lengths extracted from the P-OTDR were used to calculate the differential group delay (DGD) of the fibres. Next an expression for the root-mean-square differential group delay was derived and applied to the birefringence measurements to calculate the DGDs at a single wavelength. This method which operates at a single wavelength has a huge advantage. Firstly it is able to measure completely all the fibre characteristic parameters. Secondly it can measure mean DGD, root mean square DGD and instantaneous DGD. A plot of instantaneous DGD vs. length enables one to identify and eliminate sections with particularly high DGD. Finally since the P-OTDR system operates with a single wavelength, real time monitoring of PMD is possible via multiplexing. The results obtained are repeatable, accurate and are in good agreement with the standard Jones Matrix Eigenanalysis (JME) technique.
- Full Text:
- Date Issued: 2013
Assessment of the host potential of TETROL [(+)-(2R,3R)-1,1,4,4- tetraphenylbutane-1,2,3,4-TETROL] for the separation of isomers and related compounds
- Authors: Dorfling, Sasha-Lee
- Date: 2018
- Subjects: Chemistry, Organic , Thermal analysis Hydrogen bonding
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10948/22060 , vital:29817
- Description: In this study, we investigated the potential of a host compound, (+)-(2R,3R)-1,1,4,4- tetraphenylbutane-1,2,3,4-tetrol (TETROL), for use in the separation of isomers and related compounds using host-guest chemistry. The synthesis of this host was carried out using a standard Grignard procedure, reacting naturally-occurring optically active tartaric acid with phenylmagnesium bromide. The feasibility of this host for separating isomers and structurally-related compounds was investigated by recrystallizing it from various potential cyclic, aromatic and aliphatic guest compounds. The extent of host inclusion and guest separation were determined using 1H-NMR spectroscopy and GCMS analyses. Competition studies were conducted to establish the selectivity of TETROL for the various guest species and whether this host would be able to discriminate between them. In this instance, the host was recrystallized from equimolar amounts of binary, ternary, quaternary or quinary mixtures of the guests present in each target study. Subsequent binary or ternary competitions were conducted where the molar ratios of the guest species were varied beyond equimolar, and the guest selectivity of TETROL thus evaluated by means of selectivity profiles. Further analyses included single crystal X-ray diffraction (SCXRD), thermal analysis and Hirshfeld surface analysis. Any crystalline inclusion complex formed between host and guest, with suitable crystal quality, was analysed using SCXRD in order to determine the nature of any significant host–guest interactions present. Thermogravimetric and differential scanning calorimetry experiments provided further insight into complex stability by analysing the thermal events experienced by the complexes as they were heated at 10 °C/min. The data obtained from Hirshfeld surface analyses were used to determine whether host selectivity and/or thermal stability of the complexes were related to the number and types of interactions, observed from SCXRD, between host and guest. The ability of TETROL to discriminate between related compounds was favourable. This host proved to have selective preference for aniline over its methylated derivatives, N-methylaniline and N,N-dimethylaniline. It was also selective for cyclohexylamine over cyclohexanol and cyclohexanone, and discriminated against the pyridine, piperidine and dioxane heterocyclics in favour of morpholine. Furthermore, this host was successful in the selective separation of isomers; for example, it selectively showed discrimination between the three toluidine isomers (p-toluidine > m-toluidine > o-toluidine) and the cresols (p-cresol > m-cresol > o-cresol). Each guest mixture was selected based on data from experiments using either the industrial significance of its separation or because the mixture would add to the knowledge base of the host compound’s preferences and selectivities. In a separate study, TETROL and its derivative, (–)-(2R,3R)-2,3-dimethoxy-1,1,4,4- tetraphenylbutane-1,4-diol (DMT), were also allowed to compete for the inclusion of the guest cyclohexanone, where TETROL demonstrated superior ability. This host, in addition, showed potential for the separation of cis- and trans- 2-methylcyclohexanol.
- Full Text:
- Date Issued: 2018
- Authors: Dorfling, Sasha-Lee
- Date: 2018
- Subjects: Chemistry, Organic , Thermal analysis Hydrogen bonding
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10948/22060 , vital:29817
- Description: In this study, we investigated the potential of a host compound, (+)-(2R,3R)-1,1,4,4- tetraphenylbutane-1,2,3,4-tetrol (TETROL), for use in the separation of isomers and related compounds using host-guest chemistry. The synthesis of this host was carried out using a standard Grignard procedure, reacting naturally-occurring optically active tartaric acid with phenylmagnesium bromide. The feasibility of this host for separating isomers and structurally-related compounds was investigated by recrystallizing it from various potential cyclic, aromatic and aliphatic guest compounds. The extent of host inclusion and guest separation were determined using 1H-NMR spectroscopy and GCMS analyses. Competition studies were conducted to establish the selectivity of TETROL for the various guest species and whether this host would be able to discriminate between them. In this instance, the host was recrystallized from equimolar amounts of binary, ternary, quaternary or quinary mixtures of the guests present in each target study. Subsequent binary or ternary competitions were conducted where the molar ratios of the guest species were varied beyond equimolar, and the guest selectivity of TETROL thus evaluated by means of selectivity profiles. Further analyses included single crystal X-ray diffraction (SCXRD), thermal analysis and Hirshfeld surface analysis. Any crystalline inclusion complex formed between host and guest, with suitable crystal quality, was analysed using SCXRD in order to determine the nature of any significant host–guest interactions present. Thermogravimetric and differential scanning calorimetry experiments provided further insight into complex stability by analysing the thermal events experienced by the complexes as they were heated at 10 °C/min. The data obtained from Hirshfeld surface analyses were used to determine whether host selectivity and/or thermal stability of the complexes were related to the number and types of interactions, observed from SCXRD, between host and guest. The ability of TETROL to discriminate between related compounds was favourable. This host proved to have selective preference for aniline over its methylated derivatives, N-methylaniline and N,N-dimethylaniline. It was also selective for cyclohexylamine over cyclohexanol and cyclohexanone, and discriminated against the pyridine, piperidine and dioxane heterocyclics in favour of morpholine. Furthermore, this host was successful in the selective separation of isomers; for example, it selectively showed discrimination between the three toluidine isomers (p-toluidine > m-toluidine > o-toluidine) and the cresols (p-cresol > m-cresol > o-cresol). Each guest mixture was selected based on data from experiments using either the industrial significance of its separation or because the mixture would add to the knowledge base of the host compound’s preferences and selectivities. In a separate study, TETROL and its derivative, (–)-(2R,3R)-2,3-dimethoxy-1,1,4,4- tetraphenylbutane-1,4-diol (DMT), were also allowed to compete for the inclusion of the guest cyclohexanone, where TETROL demonstrated superior ability. This host, in addition, showed potential for the separation of cis- and trans- 2-methylcyclohexanol.
- Full Text:
- Date Issued: 2018
A comparison of programming notations for a tertiary level introductory programming course
- Authors: Cilliers, Charmain Barbara
- Date: 2004
- Subjects: Computer programming -- Study and teaching (Higher) -- South Africa , Computer programmers -- South Africa
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:11093 , http://hdl.handle.net/10948/d1019679
- Description: Increasing pressure from national government to improve throughput at South African tertiary education institutions presents challenges to educators of introductory programming courses. In response, educators must adopt effective methods and strategies that encourage novice programmers to be successful in such courses. An approach that seeks to increase and maintain satisfactory throughput is the modification of the teaching model in these courses by adjusting presentation techniques. This thesis investigates the effect of integrating an experimental iconic programming notation and associated development environment with existing conventional textual technological support in the teaching model of a tertiary level introductory programming course. The investigation compares the performance achievement of novice programmers using only conventional textual technological support with that of novice programmers using the integrated iconic and conventional textual technological support. In preparation for the investigation, interpretation of existing knowledge on the behaviour of novice programmers while learning to program results in a novel framework of eight novice programmer requirements for technological support in an introductory programming course. This framework is applied in the examination of existing categories of technological support as well as in the design of new technological support for novice programmers learning to program. It thus provides information for the selection of existing and the design of new introductory programming technological support. The findings of the investigation suggest strong evidence that performance achievement of novice programmers in a tertiary level introductory programming course improves significantly with the inclusion of iconic technological support in the teaching model. The benefits are particularly evident in the portion of the novice programmer population who have been identified as being at risk of being successful in the course. Novice programmers identified as being at risk perform substantially better when using iconic technological support concurrently with conventional textual technological support than their equals who use only the latter form. Considerably more at risk novice programmers using the integrated form of technological support are in fact successful in the introductory programming course when compared with their counterparts who use conventional textual technological support only. The contributions of this thesis address deficiencies existing in current documented research. These contributions are primarily apparent in a number of distinct areas, namely: • formalisation of a novel framework of novice programmer requirements for technological support in an introductory programming course; • application of the framework as a formal evaluation technique; • application of the framework in the design of a visual iconic programming notation and development environment; • enhancement of existing empirical evidence and experimental research methodology typically applied to studies in programming; as well as • a proposal for a modified introductory programming course teaching model. The thesis has effectively applied substantial existing research on the cognitive model of the novice programmer as well as that on experimental technological support. The increase of throughput to a recommended rate of 75 percent in the tertiary level introductory programming course at the University of Port Elizabeth is attributed solely to the incorporation of iconic technological support in the teaching model of the course.
- Full Text:
- Date Issued: 2004
- Authors: Cilliers, Charmain Barbara
- Date: 2004
- Subjects: Computer programming -- Study and teaching (Higher) -- South Africa , Computer programmers -- South Africa
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:11093 , http://hdl.handle.net/10948/d1019679
- Description: Increasing pressure from national government to improve throughput at South African tertiary education institutions presents challenges to educators of introductory programming courses. In response, educators must adopt effective methods and strategies that encourage novice programmers to be successful in such courses. An approach that seeks to increase and maintain satisfactory throughput is the modification of the teaching model in these courses by adjusting presentation techniques. This thesis investigates the effect of integrating an experimental iconic programming notation and associated development environment with existing conventional textual technological support in the teaching model of a tertiary level introductory programming course. The investigation compares the performance achievement of novice programmers using only conventional textual technological support with that of novice programmers using the integrated iconic and conventional textual technological support. In preparation for the investigation, interpretation of existing knowledge on the behaviour of novice programmers while learning to program results in a novel framework of eight novice programmer requirements for technological support in an introductory programming course. This framework is applied in the examination of existing categories of technological support as well as in the design of new technological support for novice programmers learning to program. It thus provides information for the selection of existing and the design of new introductory programming technological support. The findings of the investigation suggest strong evidence that performance achievement of novice programmers in a tertiary level introductory programming course improves significantly with the inclusion of iconic technological support in the teaching model. The benefits are particularly evident in the portion of the novice programmer population who have been identified as being at risk of being successful in the course. Novice programmers identified as being at risk perform substantially better when using iconic technological support concurrently with conventional textual technological support than their equals who use only the latter form. Considerably more at risk novice programmers using the integrated form of technological support are in fact successful in the introductory programming course when compared with their counterparts who use conventional textual technological support only. The contributions of this thesis address deficiencies existing in current documented research. These contributions are primarily apparent in a number of distinct areas, namely: • formalisation of a novel framework of novice programmer requirements for technological support in an introductory programming course; • application of the framework as a formal evaluation technique; • application of the framework in the design of a visual iconic programming notation and development environment; • enhancement of existing empirical evidence and experimental research methodology typically applied to studies in programming; as well as • a proposal for a modified introductory programming course teaching model. The thesis has effectively applied substantial existing research on the cognitive model of the novice programmer as well as that on experimental technological support. The increase of throughput to a recommended rate of 75 percent in the tertiary level introductory programming course at the University of Port Elizabeth is attributed solely to the incorporation of iconic technological support in the teaching model of the course.
- Full Text:
- Date Issued: 2004
Metalorganic vapour phase epitaxial growth and characterisation of Sb-based semiconductors
- Authors: Vankova, Viera
- Date: 2005
- Subjects: Compound semiconductors , Epitaxy , Organometallic compounds , Metal organic chemical vapor deposition
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:10548 , http://hdl.handle.net/10948/d1019678
- Description: This study focuses on the growth and characterization of epitaxial InAs and InAs1-xSbx. Layers are grown on InAs, GaAs and GaSb substrates by metalorganic vapour phase epitaxy, using trimethylindium, trimethylantimony and arsine as precursors. The growth parameters (V/III ratio, Sb vapour phase compositions) are varied in the temperature range from 500 ºC to 700 ºC, in order to study the influence of these parameters on the structural, optical and electrical properties of the materials. The layers were assessed by X-ray diffraction, electron and optical microscopy, photoluminescence and Hall measurements. Furthermore, the influence of hydrogenation and annealing on the electrical and optical properties of GaSb was investigated. It is shown that the growth temperature and the V/III ratio play a vital role in the resulting surface morphology of homoepitaxial and heteroepitaxial InAs layers. Growth at low temperatures is found to promote three-dimensional growth in both cases, with improvements in the surface morphologies observed for higher growth temperatures. All the investigated epilayers are n-type. It is shown that the electrical properties of heteroepitaxial InAs epilayers are complicated by a competition between bulk conduction and conduction due to a surface accumulation and an interface layer. The low temperature photoluminescence spectra of homoepitaxial InAs are dominated by two transitions. These are identified as band-to-band/excitonic and donor-acceptor recombination. The incorporation efficiency of antimony (Sb) into InAs1-xSbx is dependent on the growth temperature and the V/III ratio. Under the growth conditions used in this study, the incorporation efficiency of Sb is controlled by the thermal stability of the two constituent binaries (i.e. InAs and InSb). Changes in the low temperature photoluminescence spectra are detected with increasing x. From temperature and laser power dependent measurements, the highest energy line is attributed to band-to-band/excitonic recombination, while the peak appearing approximately 15 meV below this line is assigned to donor-acceptor recombination. The origin of an additional “moving” peak observed for higher Sb mole fraction x is tentatively attributed to quasi-donor-acceptor-recombination, arising from increased impurity/defect concentrations and a higher compensation ratio in the material. However, the unusual behaviour of this peak may also be ascribed to the presence of some degree of ordering in InAsSb. The exposure of a semiconductor to a hydrogen plasma usually leads to the passivation of shallow and deep centres, thereby removing their electrical and optical activity. In this study, the passivation and thermal stability of the native acceptor in p-type GaSb is also investigated. It is shown that this acceptor can be passivated, where after improvements in the electrical and optical properties of GaSb are observed. Upon annealing the passivated samples above 300 °C, the acceptor is reactivated.
- Full Text:
- Date Issued: 2005
- Authors: Vankova, Viera
- Date: 2005
- Subjects: Compound semiconductors , Epitaxy , Organometallic compounds , Metal organic chemical vapor deposition
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:10548 , http://hdl.handle.net/10948/d1019678
- Description: This study focuses on the growth and characterization of epitaxial InAs and InAs1-xSbx. Layers are grown on InAs, GaAs and GaSb substrates by metalorganic vapour phase epitaxy, using trimethylindium, trimethylantimony and arsine as precursors. The growth parameters (V/III ratio, Sb vapour phase compositions) are varied in the temperature range from 500 ºC to 700 ºC, in order to study the influence of these parameters on the structural, optical and electrical properties of the materials. The layers were assessed by X-ray diffraction, electron and optical microscopy, photoluminescence and Hall measurements. Furthermore, the influence of hydrogenation and annealing on the electrical and optical properties of GaSb was investigated. It is shown that the growth temperature and the V/III ratio play a vital role in the resulting surface morphology of homoepitaxial and heteroepitaxial InAs layers. Growth at low temperatures is found to promote three-dimensional growth in both cases, with improvements in the surface morphologies observed for higher growth temperatures. All the investigated epilayers are n-type. It is shown that the electrical properties of heteroepitaxial InAs epilayers are complicated by a competition between bulk conduction and conduction due to a surface accumulation and an interface layer. The low temperature photoluminescence spectra of homoepitaxial InAs are dominated by two transitions. These are identified as band-to-band/excitonic and donor-acceptor recombination. The incorporation efficiency of antimony (Sb) into InAs1-xSbx is dependent on the growth temperature and the V/III ratio. Under the growth conditions used in this study, the incorporation efficiency of Sb is controlled by the thermal stability of the two constituent binaries (i.e. InAs and InSb). Changes in the low temperature photoluminescence spectra are detected with increasing x. From temperature and laser power dependent measurements, the highest energy line is attributed to band-to-band/excitonic recombination, while the peak appearing approximately 15 meV below this line is assigned to donor-acceptor recombination. The origin of an additional “moving” peak observed for higher Sb mole fraction x is tentatively attributed to quasi-donor-acceptor-recombination, arising from increased impurity/defect concentrations and a higher compensation ratio in the material. However, the unusual behaviour of this peak may also be ascribed to the presence of some degree of ordering in InAsSb. The exposure of a semiconductor to a hydrogen plasma usually leads to the passivation of shallow and deep centres, thereby removing their electrical and optical activity. In this study, the passivation and thermal stability of the native acceptor in p-type GaSb is also investigated. It is shown that this acceptor can be passivated, where after improvements in the electrical and optical properties of GaSb are observed. Upon annealing the passivated samples above 300 °C, the acceptor is reactivated.
- Full Text:
- Date Issued: 2005
Modelling dispersal processes in impala-cheetah-lion ecosystems with infection in the lions
- Authors: Mbava, Willard
- Date: 2016
- Subjects: Predation (Biology) -- South Africa -- Kruger National Park Endangered species -- South Africa -- Kruger National Park
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10948/11782 , vital:26968
- Description: The study involved the predator-prey interaction of three species namely the predator (Cheetah Acinonyx jubatus), the super-predator (Lion Panthera leo), and their common prey (Impala Aepyceros melampus). The study area is the Kruger National Park. The predator being an endangered species, faces a survival problem. It is frequently killed by the super-predator to reduce competition for prey. The super-predator also scares away the predator o_ its kills. The prey forms the main diet of the predator. The plight of the predator motivated the author to formulate disease and reaction-diffusion models for the species interactions. The purpose of the models were to predict and explain the effect of large competition from the super-predator on the predator population. Important parameters related to additional predator mortality due to presence of super-predator, the disease incidence rate and induced death rate formed the focal points of the analysis. The dynamics of a predator-prey model with disease in super-predator were investigated. The super-predator species is infected with bovine Tuberculosis. In the study, the disease is considered as biological control to allow the predator population to regain from low numbers. The results highlight that in the absence of additional mortality on the predator by the super-predator, the predator population survives extinction. Furthermore, at current levels of disease incidence, the super-predator population is wiped out by the disease. However, the super-predator population survives extinction if the disease incidence rate is low. Persistence of all populations is possible in the case of low disease incidence rate and no additional mortality imparted on the predator. Furthermore, a two-species subsystem, prey and predator, is considered as a special case to determine the effect of super-predator removal from the system, on the survival of the predator. This is treated as a contrasting case from the smaller parks. The results show that the predator population thrives well in the total absence of its main competitor, with its population rising to at least twice the initial value. A reaction-diffusion three-species predator-prey model was formulated and analysed. Stability of the temporal and the spatio-temporal systems, existence and non-existence of stationary steady state solutions were studied. Conditions for the emergence of stationary patterns were deduced. The results show that by choosing the diffusion coeffcient d2 > _D 2 suffciently large, a non-constant positive solution is generated, that is, stationary patterns emerge, depicting dispersal of species. Predators were observed to occupy habitats surrounding prey. However, super-predators were observed to alternate their habitats, from staying away from prey to invading prey habitat. In the investigation, strategies to determine ways in which the predator species could be saved from extinction and its population improved were devised, and these included isolation of the predator from the super-predator.
- Full Text:
- Date Issued: 2016
- Authors: Mbava, Willard
- Date: 2016
- Subjects: Predation (Biology) -- South Africa -- Kruger National Park Endangered species -- South Africa -- Kruger National Park
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10948/11782 , vital:26968
- Description: The study involved the predator-prey interaction of three species namely the predator (Cheetah Acinonyx jubatus), the super-predator (Lion Panthera leo), and their common prey (Impala Aepyceros melampus). The study area is the Kruger National Park. The predator being an endangered species, faces a survival problem. It is frequently killed by the super-predator to reduce competition for prey. The super-predator also scares away the predator o_ its kills. The prey forms the main diet of the predator. The plight of the predator motivated the author to formulate disease and reaction-diffusion models for the species interactions. The purpose of the models were to predict and explain the effect of large competition from the super-predator on the predator population. Important parameters related to additional predator mortality due to presence of super-predator, the disease incidence rate and induced death rate formed the focal points of the analysis. The dynamics of a predator-prey model with disease in super-predator were investigated. The super-predator species is infected with bovine Tuberculosis. In the study, the disease is considered as biological control to allow the predator population to regain from low numbers. The results highlight that in the absence of additional mortality on the predator by the super-predator, the predator population survives extinction. Furthermore, at current levels of disease incidence, the super-predator population is wiped out by the disease. However, the super-predator population survives extinction if the disease incidence rate is low. Persistence of all populations is possible in the case of low disease incidence rate and no additional mortality imparted on the predator. Furthermore, a two-species subsystem, prey and predator, is considered as a special case to determine the effect of super-predator removal from the system, on the survival of the predator. This is treated as a contrasting case from the smaller parks. The results show that the predator population thrives well in the total absence of its main competitor, with its population rising to at least twice the initial value. A reaction-diffusion three-species predator-prey model was formulated and analysed. Stability of the temporal and the spatio-temporal systems, existence and non-existence of stationary steady state solutions were studied. Conditions for the emergence of stationary patterns were deduced. The results show that by choosing the diffusion coeffcient d2 > _D 2 suffciently large, a non-constant positive solution is generated, that is, stationary patterns emerge, depicting dispersal of species. Predators were observed to occupy habitats surrounding prey. However, super-predators were observed to alternate their habitats, from staying away from prey to invading prey habitat. In the investigation, strategies to determine ways in which the predator species could be saved from extinction and its population improved were devised, and these included isolation of the predator from the super-predator.
- Full Text:
- Date Issued: 2016
Swift heavy ion radiation damage in nanocrystalline ZrN
- Authors: Janse van Vuuren, Arno
- Date: 2014
- Subjects: Zirconium -- Effect of radiation on , Nanocrystals
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:10550 , http://hdl.handle.net/10948/d1020147
- Description: ZrN has been identified as a candidate material for use as an inert matrix fuel host for the transmutation of plutonium and minor actinides. These materials will be subjected to large amounts of different types of radiation within the nuclear reactor core. The types of radiation include fission fragments and alpha-particles amongst others. Recent studies suggest that nanocrystalline material may have a higher radiation tolerance than their polycrystalline and bulk counterparts. Some studies have shown that swift heavy ion irradiation may also significantly modulate hydrogen and helium behaviour in materials. This phenomenon is also of considerable practical interest for inert matrix fuel hosts, since these materials accumulate helium via (n,) reactions and will also be subjected to irradiation by fission fragments. The aim of this investigation is therefore to study the effects of fission fragment and alpha particle irradiation on nanocrystalline ZrN. In an effort to simulate the effects of fission fragments on nanocrystalline zirconium nitride different layers (on a Si substrate) of various thicknesses (0.1, 3, 10 and 20 μm) were irradiated with 167 MeV Xe, 250 MeV Kr and 695 MeV Bi ions to fluences in the range from 31012 to 2.61015 cm-2 for Xe, 1×1013 to 7.06×1013 cm-2 for Kr and 1012 to 1013 cm-2 for Bi. The purpose of this irradiation is to simulate the effects of fission fragments on nanocrystalline ZrN. In order to simulate the effects of alpha particles and the combined effects of alpha particles and fission fragments on nanocrystalline ZrN it was irradiated with 30 keV He to fluences between 1016 and 5×1016 cm-2, 167 MeV Xe to fluences between 5×1013 and 1014 cm-2 and also 695 MeV Bi to a fluence of 1.5×1013 cm-2. He/Bi and He/Xe irradiated samples were annealed at temperatures between 600 and 1000 °C. The different irradiated layers were subsequently analysed via X-ray diffraction (XRD), μ-Raman, transmission electron microscopy (TEM) and nano indentation hardness testing (NIH) techniques. XRD, TEM, μ-Raman and NIH results indicate that ZrN has a very high tolerance to the effects of high energy irradiation. The microstructure of nanocrystalline ZrN remains unaffected by electronic excitation effects even at a very high stopping power. TEM and SEM results indicated that post irradiation heat treatment induces exfoliation at a depth that corresponds to the end-of-range of 30 keV He ions. Results from He/Xe irradiated samples revealed that electronic excitation effects, due to Xe ions, suppress helium blister formation and consequently the exfoliation processes. He/Bi samples however do not show the same effects, but this is possibly due to the lower fluence of Bi ions. This suggests that nanocrystalline ZrN is prone to the formation of He blisters which may ultimately lead material failure. These effects may however be mitigated by electronic excitation effects from certain SHIs.
- Full Text:
- Date Issued: 2014
- Authors: Janse van Vuuren, Arno
- Date: 2014
- Subjects: Zirconium -- Effect of radiation on , Nanocrystals
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:10550 , http://hdl.handle.net/10948/d1020147
- Description: ZrN has been identified as a candidate material for use as an inert matrix fuel host for the transmutation of plutonium and minor actinides. These materials will be subjected to large amounts of different types of radiation within the nuclear reactor core. The types of radiation include fission fragments and alpha-particles amongst others. Recent studies suggest that nanocrystalline material may have a higher radiation tolerance than their polycrystalline and bulk counterparts. Some studies have shown that swift heavy ion irradiation may also significantly modulate hydrogen and helium behaviour in materials. This phenomenon is also of considerable practical interest for inert matrix fuel hosts, since these materials accumulate helium via (n,) reactions and will also be subjected to irradiation by fission fragments. The aim of this investigation is therefore to study the effects of fission fragment and alpha particle irradiation on nanocrystalline ZrN. In an effort to simulate the effects of fission fragments on nanocrystalline zirconium nitride different layers (on a Si substrate) of various thicknesses (0.1, 3, 10 and 20 μm) were irradiated with 167 MeV Xe, 250 MeV Kr and 695 MeV Bi ions to fluences in the range from 31012 to 2.61015 cm-2 for Xe, 1×1013 to 7.06×1013 cm-2 for Kr and 1012 to 1013 cm-2 for Bi. The purpose of this irradiation is to simulate the effects of fission fragments on nanocrystalline ZrN. In order to simulate the effects of alpha particles and the combined effects of alpha particles and fission fragments on nanocrystalline ZrN it was irradiated with 30 keV He to fluences between 1016 and 5×1016 cm-2, 167 MeV Xe to fluences between 5×1013 and 1014 cm-2 and also 695 MeV Bi to a fluence of 1.5×1013 cm-2. He/Bi and He/Xe irradiated samples were annealed at temperatures between 600 and 1000 °C. The different irradiated layers were subsequently analysed via X-ray diffraction (XRD), μ-Raman, transmission electron microscopy (TEM) and nano indentation hardness testing (NIH) techniques. XRD, TEM, μ-Raman and NIH results indicate that ZrN has a very high tolerance to the effects of high energy irradiation. The microstructure of nanocrystalline ZrN remains unaffected by electronic excitation effects even at a very high stopping power. TEM and SEM results indicated that post irradiation heat treatment induces exfoliation at a depth that corresponds to the end-of-range of 30 keV He ions. Results from He/Xe irradiated samples revealed that electronic excitation effects, due to Xe ions, suppress helium blister formation and consequently the exfoliation processes. He/Bi samples however do not show the same effects, but this is possibly due to the lower fluence of Bi ions. This suggests that nanocrystalline ZrN is prone to the formation of He blisters which may ultimately lead material failure. These effects may however be mitigated by electronic excitation effects from certain SHIs.
- Full Text:
- Date Issued: 2014
Metabolic energy relations in the Eastern Cape Angulate Tortoise (Chersina Anguluta)
- Authors: Setlalekgomo, Mpho Rinah
- Date: 2010
- Subjects: Eastern Cape angulate Tortoise , Oxygen consumption (Physiology)
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:10690 , http://hdl.handle.net/10948/1400 , Eastern Cape angulate Tortoise , Oxygen consumption (Physiology)
- Description: The daily oxygen consumption (VO2) pattern, the effects of varying ambient temperatures, season and mass on the resting oxygen consumption (RVO2) of Chersina angulata of the Eastern Cape were investigated. The RVO2 was measured using flow-through respirometry and specific resting oxygen consumption (sRVO2) calculated. To determine the daily pattern in the VO2 of C. angulata, the tortoises were acclimated in an environmentally controlled room (ECR) to an ambient temperature of 26 ± 1°C and a light regime of 14 hours of light and 10 hours of darkness (14L:10D) for at least a week prior to the RVO2 measurements. The RVO2 was measured at a constant temperature of 26 ± 1°C, and at three different light regimes, namely: 14L:10D, constant darkness (DD) and constant light (LL). There were no significant effects of mass or gender on the sRVO2 of the tortoises used. Rhythms in the sRVO2 were detected under all three light regimes. The amplitudes of the rhythm were largest at 14L:10D, followed by DD and smallest at LL regime. The persistence of the rhythmic pattern under constant conditions suggests the existence of an endogenous circadian rhythm in the sRVO2 for adult C. angulata. To test for the effect of ambient temperature on the sRVO2 of adult C. angulata, the tortoises were acclimated to 22 ± 1°C and a 14L:10D light regime prior to the RVO2 measurements. RVO2 was measured at eight experimental temperatures; 14°C, 18°C, 22°C, 26°C, 30°C, 35°C, 38°C and 40°C. The sRVO2 was not influenced by gender and increased with experimental temperatures, but this did not happen consistently over the whole range of temperatures tested. A plateau, possibly a thermal preferendum zone, was detected within the temperature range of 26 - 38°C. Determination of seasonal effect on the sRVO2 of adult C. angulata was accomplished by acclimating tortoises to standard summer and winter conditions. Seasonal effects were tested in the appropriate seasons. Winter experiments were conducted in winter and summer experiments conducted in summer. The RVO2 was measured at experimental temperature 14°C, 18°C and 22°C. In addition RVO2 of iv winter-acclimated tortoises was also measured at 10°C. The sRVO2 increased significantly with increasing temperature within the temperature range tested. No distinct pattern was observed in the seasonal acclimation of adult C. angulata. The metabolic rate-temperature curves of the summer and the winter-acclimated tortoises cross each other. Season and temperature had no significant effects on the mass-scaling exponent of the sRVO2. The exponent ranged from 0.48 to 0.73 within the temperature range of 22 - 38°C. Below and above this temperature range, the exponent ranged from 1.47 to 1.67. An inverse relationship was observed between sRVO2 and body mass over the temperature range of 22 - 38°C. At 14°C and 18°C, sRVO2 increased with body mass, while at 10°C and at 40°C the slope was 1.01.
- Full Text:
- Date Issued: 2010
- Authors: Setlalekgomo, Mpho Rinah
- Date: 2010
- Subjects: Eastern Cape angulate Tortoise , Oxygen consumption (Physiology)
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:10690 , http://hdl.handle.net/10948/1400 , Eastern Cape angulate Tortoise , Oxygen consumption (Physiology)
- Description: The daily oxygen consumption (VO2) pattern, the effects of varying ambient temperatures, season and mass on the resting oxygen consumption (RVO2) of Chersina angulata of the Eastern Cape were investigated. The RVO2 was measured using flow-through respirometry and specific resting oxygen consumption (sRVO2) calculated. To determine the daily pattern in the VO2 of C. angulata, the tortoises were acclimated in an environmentally controlled room (ECR) to an ambient temperature of 26 ± 1°C and a light regime of 14 hours of light and 10 hours of darkness (14L:10D) for at least a week prior to the RVO2 measurements. The RVO2 was measured at a constant temperature of 26 ± 1°C, and at three different light regimes, namely: 14L:10D, constant darkness (DD) and constant light (LL). There were no significant effects of mass or gender on the sRVO2 of the tortoises used. Rhythms in the sRVO2 were detected under all three light regimes. The amplitudes of the rhythm were largest at 14L:10D, followed by DD and smallest at LL regime. The persistence of the rhythmic pattern under constant conditions suggests the existence of an endogenous circadian rhythm in the sRVO2 for adult C. angulata. To test for the effect of ambient temperature on the sRVO2 of adult C. angulata, the tortoises were acclimated to 22 ± 1°C and a 14L:10D light regime prior to the RVO2 measurements. RVO2 was measured at eight experimental temperatures; 14°C, 18°C, 22°C, 26°C, 30°C, 35°C, 38°C and 40°C. The sRVO2 was not influenced by gender and increased with experimental temperatures, but this did not happen consistently over the whole range of temperatures tested. A plateau, possibly a thermal preferendum zone, was detected within the temperature range of 26 - 38°C. Determination of seasonal effect on the sRVO2 of adult C. angulata was accomplished by acclimating tortoises to standard summer and winter conditions. Seasonal effects were tested in the appropriate seasons. Winter experiments were conducted in winter and summer experiments conducted in summer. The RVO2 was measured at experimental temperature 14°C, 18°C and 22°C. In addition RVO2 of iv winter-acclimated tortoises was also measured at 10°C. The sRVO2 increased significantly with increasing temperature within the temperature range tested. No distinct pattern was observed in the seasonal acclimation of adult C. angulata. The metabolic rate-temperature curves of the summer and the winter-acclimated tortoises cross each other. Season and temperature had no significant effects on the mass-scaling exponent of the sRVO2. The exponent ranged from 0.48 to 0.73 within the temperature range of 22 - 38°C. Below and above this temperature range, the exponent ranged from 1.47 to 1.67. An inverse relationship was observed between sRVO2 and body mass over the temperature range of 22 - 38°C. At 14°C and 18°C, sRVO2 increased with body mass, while at 10°C and at 40°C the slope was 1.01.
- Full Text:
- Date Issued: 2010