Morphometrics and reproduction of Terebrasabella heterouncinata (Polychaeta:Sabellidae), infesting abalone (Haliotis midae) from different culture environments
- Authors: Gray, Michael
- Date: 2003
- Subjects: Polychaeta , Sabellidae , Abalones -- Physiology , Abalones -- Nutrition , Abalone culture
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5384 , http://hdl.handle.net/10962/d1018231
- Description: In the late 1980's abalone culturalists noticed reduced growth rate and shell deformities in some abalone stocks. These problems were the result of infestations by a shell boring polychaete, Terebrasabella heterouncinata. Under intensive abalone culture conditions the level of infestation can reach epidemic proportions and there are often severe consequences for the host abalone. Heavy sabellid infestation levels have placed the economic viability of several South African farms under threat. This study formed part of an ongoing project that is aimed at investigating the basic biology of Terebrasabella heterouncinata. The majority of abalone farmers in South Africa feed their abalone either naturally occurring kelp (Ecklonia maxima) or the formulated abalone feed, Abfeed. Farmers have suggested that the use of Abfeed is associated with higher sabellid infestation levels and changing the abalone diet from Abfeed to kelp helps reduce sabellid infestation. Speculation has arisen indicating that older, slower growing abalone are more susceptible to sabellid infestation. The effect of host abalone diet history and their growth on sabellid settlement success, morphometries and reproduction was quantified. To better understand the plasticity of the expression of life history traits the variability of morphometric and reproductive characteristics was compared between different farm environments. And more...
- Full Text:
- Date Issued: 2003
- Authors: Gray, Michael
- Date: 2003
- Subjects: Polychaeta , Sabellidae , Abalones -- Physiology , Abalones -- Nutrition , Abalone culture
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5384 , http://hdl.handle.net/10962/d1018231
- Description: In the late 1980's abalone culturalists noticed reduced growth rate and shell deformities in some abalone stocks. These problems were the result of infestations by a shell boring polychaete, Terebrasabella heterouncinata. Under intensive abalone culture conditions the level of infestation can reach epidemic proportions and there are often severe consequences for the host abalone. Heavy sabellid infestation levels have placed the economic viability of several South African farms under threat. This study formed part of an ongoing project that is aimed at investigating the basic biology of Terebrasabella heterouncinata. The majority of abalone farmers in South Africa feed their abalone either naturally occurring kelp (Ecklonia maxima) or the formulated abalone feed, Abfeed. Farmers have suggested that the use of Abfeed is associated with higher sabellid infestation levels and changing the abalone diet from Abfeed to kelp helps reduce sabellid infestation. Speculation has arisen indicating that older, slower growing abalone are more susceptible to sabellid infestation. The effect of host abalone diet history and their growth on sabellid settlement success, morphometries and reproduction was quantified. To better understand the plasticity of the expression of life history traits the variability of morphometric and reproductive characteristics was compared between different farm environments. And more...
- Full Text:
- Date Issued: 2003
The fisheries potential of Marcusenius pongolensis, Oreochromis mossambicus and Schilbe intermedius in Mnjoli dam, Swaziland
- Authors: Khumalo, Nokuthula
- Date: 2006
- Subjects: Mozambique tilapia , Marcusenius pongolensis , Schilbe intermedius , Fishes -- Swaziland , Fisheries -- Swaziland , Tilapia -- Swaziland
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5283 , http://hdl.handle.net/10962/d1005127 , Mozambique tilapia , Marcusenius pongolensis , Schilbe intermedius , Fishes -- Swaziland , Fisheries -- Swaziland , Tilapia -- Swaziland
- Description: This thesis investigates aspects of the diversity, abundance and biology of the fish species inhabiting Mnjoli Dam, an irrigation dam that is located in the rural lowveld region of Swaziland. Specific objectives for this thesis were: to determine the fish species present and select three principal species based on their abundance; to investigate the relative abundance and distribution of the three selected species; and to describe key population parameters, such as growth, maturity, reproductive seasonality and mortality. The three dominant species were selected on their fisheries potential. These were Marcusenius pongolensis, Oreochromis mossambicus and Schilbe intermedius. Marcusenius pongolensis was the most abundant species in terms of both catch per unit effort and mass. Catch rates were shown to vary according to habitat type. Age and growth parameters were obtained from sectioned otoliths. Marginal zone analysis showed that annulus formation occurred in winter for all three species. The maximum-recorded ages were 8, 6 and 8 for M. pongolensis, O. mossambicus and S. intermedius, respectively. Growth for the three species was best described by the three parameter von Bertalanffy growth model as Lt = 1.88.67(1- exp⁻¹·⁴⁸⁽t⁺°·⁶⁷⁾) mm FL for M. pongolensis; Lt = 226.83(1- exp⁻°·⁴⁽t⁺²·°²⁾) mm TL for O. mossambicus and Lt = 214.59(1- exp⁻°·⁶°⁽t⁺¹·²°⁾) mm FL for S. intermedius. Sexual maturity was estimated for male and female M. pongolensis at 134 mm FL and 119 mm FL, respectively. Oreochromis mossambicus matured at 239 mm TL and S. intermedius at 205 mm FL. Two spawning peaks for M. pongolensis and S. intermedius were observed, one at the onset of summer (November) and the second at the beginning of autumn (February-March). Oreochromis mossambicus also exhibited two spawning peaks, one in spring (September) and the second in autumn (February –March). Mean mortality rate (Z), estimated using catch curve analysis was 0.77 year⁻¹ for M. pongolensis, 0.49 year⁻¹ for O. mossambicus and 0.79 year⁻¹ for S. intermedius. Natural mortality was assumed to be equal to Z since there is no fishery activity at the dam. Size specific selectivity curves were developed for each species. Of all the mesh sizes used, the 44 mm mesh size net had the highest catch rates in terms of numbers for M. pongolensis and S. intermedius. The 75mm mesh caught the highest catch rates for O. mossambicus. . The 44mm and 75 mm meshes seem to be the most suitable mesh sizes for harvesting the candidate species. It is concluded that no commercial fishery should be established on the dam, yet a small subsistence fishery could be a possible option. Management options such as input controls, open and closed seasons and areas and minimum sizes are discussed.
- Full Text:
- Date Issued: 2006
- Authors: Khumalo, Nokuthula
- Date: 2006
- Subjects: Mozambique tilapia , Marcusenius pongolensis , Schilbe intermedius , Fishes -- Swaziland , Fisheries -- Swaziland , Tilapia -- Swaziland
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5283 , http://hdl.handle.net/10962/d1005127 , Mozambique tilapia , Marcusenius pongolensis , Schilbe intermedius , Fishes -- Swaziland , Fisheries -- Swaziland , Tilapia -- Swaziland
- Description: This thesis investigates aspects of the diversity, abundance and biology of the fish species inhabiting Mnjoli Dam, an irrigation dam that is located in the rural lowveld region of Swaziland. Specific objectives for this thesis were: to determine the fish species present and select three principal species based on their abundance; to investigate the relative abundance and distribution of the three selected species; and to describe key population parameters, such as growth, maturity, reproductive seasonality and mortality. The three dominant species were selected on their fisheries potential. These were Marcusenius pongolensis, Oreochromis mossambicus and Schilbe intermedius. Marcusenius pongolensis was the most abundant species in terms of both catch per unit effort and mass. Catch rates were shown to vary according to habitat type. Age and growth parameters were obtained from sectioned otoliths. Marginal zone analysis showed that annulus formation occurred in winter for all three species. The maximum-recorded ages were 8, 6 and 8 for M. pongolensis, O. mossambicus and S. intermedius, respectively. Growth for the three species was best described by the three parameter von Bertalanffy growth model as Lt = 1.88.67(1- exp⁻¹·⁴⁸⁽t⁺°·⁶⁷⁾) mm FL for M. pongolensis; Lt = 226.83(1- exp⁻°·⁴⁽t⁺²·°²⁾) mm TL for O. mossambicus and Lt = 214.59(1- exp⁻°·⁶°⁽t⁺¹·²°⁾) mm FL for S. intermedius. Sexual maturity was estimated for male and female M. pongolensis at 134 mm FL and 119 mm FL, respectively. Oreochromis mossambicus matured at 239 mm TL and S. intermedius at 205 mm FL. Two spawning peaks for M. pongolensis and S. intermedius were observed, one at the onset of summer (November) and the second at the beginning of autumn (February-March). Oreochromis mossambicus also exhibited two spawning peaks, one in spring (September) and the second in autumn (February –March). Mean mortality rate (Z), estimated using catch curve analysis was 0.77 year⁻¹ for M. pongolensis, 0.49 year⁻¹ for O. mossambicus and 0.79 year⁻¹ for S. intermedius. Natural mortality was assumed to be equal to Z since there is no fishery activity at the dam. Size specific selectivity curves were developed for each species. Of all the mesh sizes used, the 44 mm mesh size net had the highest catch rates in terms of numbers for M. pongolensis and S. intermedius. The 75mm mesh caught the highest catch rates for O. mossambicus. . The 44mm and 75 mm meshes seem to be the most suitable mesh sizes for harvesting the candidate species. It is concluded that no commercial fishery should be established on the dam, yet a small subsistence fishery could be a possible option. Management options such as input controls, open and closed seasons and areas and minimum sizes are discussed.
- Full Text:
- Date Issued: 2006
The cryopreservation potential and ultrastructure of Agulhas sole Austroglossus pectoralis spermatozoa
- Authors: Markovina, Michael Zeljan
- Date: 2008
- Subjects: Spermatozoa , Spermatozoa -- Cryopreservation , Aquaculture , Fishes -- Breeding , Soleidae , Flatfishes , Agulhas Current (South Africa)
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5251 , http://hdl.handle.net/10962/d1005094 , Spermatozoa , Spermatozoa -- Cryopreservation , Aquaculture , Fishes -- Breeding , Soleidae , Flatfishes , Agulhas Current (South Africa)
- Description: As the estimated market demand for the Agulhas sole Austroglossus pectoralis exceeds the annual catch from trawlers, this species is a potential aquaculture candidate. Broodstock conditioning and gamete preservation is part of research and development aiming at establishing a breeding protocol for a new aquaculture species. Based on a literature review of the morphology of pleuronectiform spermatozoa, this study was designed firstly, to contribute to the field of spermatozoan morphology by describing the ultrastructure of A. pectoralis spermatozoa. This was followed by an experiment to cryopreserve mature spermatozoa to provide baseline data for future studies on this and related species. The testis of A. pectoralis was a paired structure encased in a membrane, the tunica albuginea. The primary testis was located on the dorsal surface of the rib cage and the secondary testis on the ventral side. The testis was of an unrestricted spermatogonial type, based upon observations of spermatogonia along the entire length of the lobule. Mature spermatozoa of A. pectoralis had an acrosome-free ovoid head 1.68 ± 1.6μm in length and 1.7 ± 1.6μm in diameter, a short mid-piece of 0.5 ± 0.1μm in length, containing 7 irregularly shaped mitochondria forming a ring-like structure at the base of the nucleus. The flagellae were 47.4 ± 4.8μm in length, most with two plasma membrane lateral fin-like projections. However, some flagellae had either zero or three lateral fin projections. Cross-sections of the flagellae showed an axenome with a 9+2 microtubule configuration. The proximal and distal centriols were coaxal, situated deep within the nuclear fossa. The structure of A. pectoralis spermatozoa conformed to the type 1 ect-aquasperm, also found in externally fertilizing species. This type has been suggested to be the plesiomorphic form in Neopterigians. Finally, this study contributed to a cryopreservation protocol for A. pectoralis spermatozoa by testing the two cryoprotectants dimethyl sulphoxide (DMSO) and glycerol. Glycerol, at a concentration of 10%, offered better cryoprotection than DMSO. This was established using flow cytometry analysis of post-thaw nuclear membrane integrity after 64 days of storage in liquid nitrogen. The toxicity of DMSO to isolated cellular proteins may have resulted in DMSO-treated sperm having the highest percent (35.2% ± 3.2%) of non-viable cells compared with 23.0% ± 2.5% and 27.8% ± 3.4% for glycerol and the control, respectively. The presence of sucrose in the Modified Mounib Medium extender solution may explain why 45.5% ± 5% of the sperm cells were potentially viable in the control treatment. Initially, the white margined sole Dagatichthys marginatus (Soleidae) was selected as the most suitable candidate for flatfish aquaculture in South Africa. Thus, the aim of this study was to investigate the cryogenic potential and ultrastructure of D. marginatus spermatozoa. However, due to a skewed sex ratio, there were not enough males available to study this species. A skewed sex ratio is common amongst soleids, thus, the need to develop effective cryopreservation methods and to develop an understanding of sperm morphology so that the best time for cryopreservation can be chosen. In conclusion, this first description of spermatozan morphology of A. pectoralis contributed to our understanding of soleid sperm ultrastructure. In addition, a comparison of testis appearance between fish sampled just prior to spawning season and fish with mature sperm provided information on the spawning season of this species. The findings from the cryopreservation experiment suggested that glycerol was a feasible cryoprotectant for this species when sperm was prepared under field conditions.
- Full Text:
- Date Issued: 2008
- Authors: Markovina, Michael Zeljan
- Date: 2008
- Subjects: Spermatozoa , Spermatozoa -- Cryopreservation , Aquaculture , Fishes -- Breeding , Soleidae , Flatfishes , Agulhas Current (South Africa)
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5251 , http://hdl.handle.net/10962/d1005094 , Spermatozoa , Spermatozoa -- Cryopreservation , Aquaculture , Fishes -- Breeding , Soleidae , Flatfishes , Agulhas Current (South Africa)
- Description: As the estimated market demand for the Agulhas sole Austroglossus pectoralis exceeds the annual catch from trawlers, this species is a potential aquaculture candidate. Broodstock conditioning and gamete preservation is part of research and development aiming at establishing a breeding protocol for a new aquaculture species. Based on a literature review of the morphology of pleuronectiform spermatozoa, this study was designed firstly, to contribute to the field of spermatozoan morphology by describing the ultrastructure of A. pectoralis spermatozoa. This was followed by an experiment to cryopreserve mature spermatozoa to provide baseline data for future studies on this and related species. The testis of A. pectoralis was a paired structure encased in a membrane, the tunica albuginea. The primary testis was located on the dorsal surface of the rib cage and the secondary testis on the ventral side. The testis was of an unrestricted spermatogonial type, based upon observations of spermatogonia along the entire length of the lobule. Mature spermatozoa of A. pectoralis had an acrosome-free ovoid head 1.68 ± 1.6μm in length and 1.7 ± 1.6μm in diameter, a short mid-piece of 0.5 ± 0.1μm in length, containing 7 irregularly shaped mitochondria forming a ring-like structure at the base of the nucleus. The flagellae were 47.4 ± 4.8μm in length, most with two plasma membrane lateral fin-like projections. However, some flagellae had either zero or three lateral fin projections. Cross-sections of the flagellae showed an axenome with a 9+2 microtubule configuration. The proximal and distal centriols were coaxal, situated deep within the nuclear fossa. The structure of A. pectoralis spermatozoa conformed to the type 1 ect-aquasperm, also found in externally fertilizing species. This type has been suggested to be the plesiomorphic form in Neopterigians. Finally, this study contributed to a cryopreservation protocol for A. pectoralis spermatozoa by testing the two cryoprotectants dimethyl sulphoxide (DMSO) and glycerol. Glycerol, at a concentration of 10%, offered better cryoprotection than DMSO. This was established using flow cytometry analysis of post-thaw nuclear membrane integrity after 64 days of storage in liquid nitrogen. The toxicity of DMSO to isolated cellular proteins may have resulted in DMSO-treated sperm having the highest percent (35.2% ± 3.2%) of non-viable cells compared with 23.0% ± 2.5% and 27.8% ± 3.4% for glycerol and the control, respectively. The presence of sucrose in the Modified Mounib Medium extender solution may explain why 45.5% ± 5% of the sperm cells were potentially viable in the control treatment. Initially, the white margined sole Dagatichthys marginatus (Soleidae) was selected as the most suitable candidate for flatfish aquaculture in South Africa. Thus, the aim of this study was to investigate the cryogenic potential and ultrastructure of D. marginatus spermatozoa. However, due to a skewed sex ratio, there were not enough males available to study this species. A skewed sex ratio is common amongst soleids, thus, the need to develop effective cryopreservation methods and to develop an understanding of sperm morphology so that the best time for cryopreservation can be chosen. In conclusion, this first description of spermatozan morphology of A. pectoralis contributed to our understanding of soleid sperm ultrastructure. In addition, a comparison of testis appearance between fish sampled just prior to spawning season and fish with mature sperm provided information on the spawning season of this species. The findings from the cryopreservation experiment suggested that glycerol was a feasible cryoprotectant for this species when sperm was prepared under field conditions.
- Full Text:
- Date Issued: 2008
Lead-radium dating of two deep-water fishes from the southern hemisphere, Patagonian toothfish (Dissostichus eleginoides) and Orange Roughy (Hoplostethus atlanticus)
- Authors: Andrews, Allen Hia
- Date: 2009
- Subjects: Fishes -- Age determination , Fishes -- Southern hemisphere -- Longevity , Fishes -- Growth , Radioactive dating , Patagonian toothfish , Patagonian toothfish -- Fisheries , Orange roughy , Orange roughy -- Fisheries , Deep-sea fishes -- Southern hemisphere , Deep-sea fisheries , Deep-sea fisheries -- Southern hemisphere
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:5295 , http://hdl.handle.net/10962/d1005140
- Description: Patagonian toothfish (Dissostichus eleginoides) or "Chilean sea bass" support a valuable and controversial fishery, but the life history is little known and longevity estimates range from ~20 to more than 40 or 50 yr. In this study, lead-radium dating provided validated age estimates from juveniles to older adults, supporting the use of otoliths as accurate indicators of age. The oldest age groups were near 30 yr, which provided support for age estimates exceeding 40 or 50 yr from grow zone counts in otolith sections. Hence, scale reading, which rarely exceeds 20 years, has the potential for age underestimation. Lead-radium dating revealed what may be minor differences in age interpretation between two facilities and findings may provide an age-validated opportunity for the CCAMLR Otolith Network to reassess otolith interpretations. Orange roughy (Hoplostethus atlanticus) support a major deep-sea fishery and stock assessments often depend on age analyses, but lifespan estimates range from ~20 to over 100 yr and validation of growth zone counts remained unresolved. An early application of lead-radium dating supported centenarian ages, but the findings were met with disbelief and some studies have attempted to discredit the technique and the long lifespan. In this study, an improved lead-radium dating technique used smaller samples than previously possible and circumvented assumptions that were previously necessary. Lead-radium dating of otolith cores, the first few years of growth, provided ratios that correlated well with the ingrowth curve. This provided robust support for age estimates from otolith thin sections. Use of radiometric ages as independent age estimates indicated the fish in the oldest group were at least 93 yr. Lead-radium dating has validated a centenarian lifespan for orange roughy. To date, radium-226 has been measured in otoliths of 39 fish species ranging from the northern Pacific and Atlantic Oceans to the Southern Ocean. In total, 367 reliable radium-226 measurements were made in 36 studies since the first lead-radium dating study on fish in 1982. The activity of radium-226 measurements ranged over 3 orders of magnitude (<0.001 to >1.0 dpm.g⁻¹). An analysis revealed ontogenetic differences in radium-226 uptake that may be attributed to changes in habitat or diet. Radiometric age from otolith core studies was used to describe a radium-226 uptake time-series for some species, which revealed interesting patterns over long periods. This synopsis provides information on the uptake of radium-226 to otoliths from an environmental perspective, which can be used as a basis for future studies.
- Full Text:
- Date Issued: 2009
- Authors: Andrews, Allen Hia
- Date: 2009
- Subjects: Fishes -- Age determination , Fishes -- Southern hemisphere -- Longevity , Fishes -- Growth , Radioactive dating , Patagonian toothfish , Patagonian toothfish -- Fisheries , Orange roughy , Orange roughy -- Fisheries , Deep-sea fishes -- Southern hemisphere , Deep-sea fisheries , Deep-sea fisheries -- Southern hemisphere
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:5295 , http://hdl.handle.net/10962/d1005140
- Description: Patagonian toothfish (Dissostichus eleginoides) or "Chilean sea bass" support a valuable and controversial fishery, but the life history is little known and longevity estimates range from ~20 to more than 40 or 50 yr. In this study, lead-radium dating provided validated age estimates from juveniles to older adults, supporting the use of otoliths as accurate indicators of age. The oldest age groups were near 30 yr, which provided support for age estimates exceeding 40 or 50 yr from grow zone counts in otolith sections. Hence, scale reading, which rarely exceeds 20 years, has the potential for age underestimation. Lead-radium dating revealed what may be minor differences in age interpretation between two facilities and findings may provide an age-validated opportunity for the CCAMLR Otolith Network to reassess otolith interpretations. Orange roughy (Hoplostethus atlanticus) support a major deep-sea fishery and stock assessments often depend on age analyses, but lifespan estimates range from ~20 to over 100 yr and validation of growth zone counts remained unresolved. An early application of lead-radium dating supported centenarian ages, but the findings were met with disbelief and some studies have attempted to discredit the technique and the long lifespan. In this study, an improved lead-radium dating technique used smaller samples than previously possible and circumvented assumptions that were previously necessary. Lead-radium dating of otolith cores, the first few years of growth, provided ratios that correlated well with the ingrowth curve. This provided robust support for age estimates from otolith thin sections. Use of radiometric ages as independent age estimates indicated the fish in the oldest group were at least 93 yr. Lead-radium dating has validated a centenarian lifespan for orange roughy. To date, radium-226 has been measured in otoliths of 39 fish species ranging from the northern Pacific and Atlantic Oceans to the Southern Ocean. In total, 367 reliable radium-226 measurements were made in 36 studies since the first lead-radium dating study on fish in 1982. The activity of radium-226 measurements ranged over 3 orders of magnitude (<0.001 to >1.0 dpm.g⁻¹). An analysis revealed ontogenetic differences in radium-226 uptake that may be attributed to changes in habitat or diet. Radiometric age from otolith core studies was used to describe a radium-226 uptake time-series for some species, which revealed interesting patterns over long periods. This synopsis provides information on the uptake of radium-226 to otoliths from an environmental perspective, which can be used as a basis for future studies.
- Full Text:
- Date Issued: 2009
Towards the development of a larval feeding strategy for the white-margined sole (Dagetichthys marginatus)
- Authors: Thompson, Ernst Frederick
- Date: 2014
- Subjects: Flatfishes -- South Africa , Soleidae -- South Africa , Soleidae -- Larvae , Soleidae -- Larvae -- Feeding and feeds , Soleidae -- Larvae -- Physiology , Artemia
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:5364 , http://hdl.handle.net/10962/d1012982
- Description: The major bottleneck during the domestication of the white-margined sole Dagetichthys marginatus in South Africa has been low larval survival. The cause of this is not clear but considering current literature on flatfish culture and more specifically soleid culture, nutritional deficiencies are hypothesized to be the main possible cause. Following the importance of nutrition, the first aim of the research was to use an ontogenetic developmental approach to develop a species specific larval feeding strategy. Ontogenetic development of D. marginatus showed that weaning will take place at much later ages than other soleids currently being farmed. This makes the partial replacement of Artemia with a suitable inert diet in co-feeding strategies very important to cut the cost associated of live food production. This leads on to the second aim, in which an 'in vitro' approach was used to model the digestibility of Artemia, which could ultimately contribute towards designing inert feeds with similar digestibility characteristics to Artemia in the future. Obtaining nutrients from food is closely linked to the functional status of the digestive tract, the support organs and the external morphological characteristics required for the ingestion of live or inert feeds. Considering both morphological and physiological ontogenetic development, it is clear that D. marginatus follow a similar pattern to other soleids. Larvae can successfully feed on Artemia as early as 3 days after hatching but exhibit a slow metamorphosis into the juvenile stage when compared to other soleids. The absence of any detectable acidic protease activity during the first 45 days of development and the importance of exogenous enzymes from Artemia all points to limited capacity to digest artificial diets. Prior to modelling the 'in vitro' digestion of Artemia, digestive enzyme activity at different pH's were modelled using functional forms from the normal distributive category of functions. , As there is no substantiated information for the general effects of pH on enzyme activity in the literature for finfish larvae, three species occurring in the same bio-geographical region of Dagetichthys marginatus, namely Sarpa salpa, Diplodus sargus capensis and Argyrosomus japonicus were used to investigate this effect. The fitted parameters, namely the optimal pH and sigma (the slope around the optimal pH) showed two interesting results. When using a negative log likelihood ratio test to test for differences between species for a particular enzyme, the optimal pH for alkaline proteases (7.67), lipase (8.03), amylase (7.69) and phosphatase (9.84) activity was the same for all three species. Furthermore, the study illustrated the potential to detect dietary shifts during ontogenetic development based on changes in enzyme activity around the optimal pH using the sigma parameter. Sarpa salpa showed increased amylase activity and a decrease in protease activity around the optimal pH with increased size, corresponding to a change in diet from zooplankton to algae. The 'in vitro' modelling approach taken in this study was based on known enzyme interactions and dynamics which makes the results very interpretable. from Artemia is achieved based on gut evacuation time and enzyme levels. This 'in vitro' study furthermore clearly indicates the importance of exogenous enzymes from Artemia, contributing as much as 54 percent to protein digestion and 64 – 72 percent to carbohydrate digestion. This was however, only an initial investigation, and further expansion of the model is required to achieve a complete understanding of Artemia digestion and ultimately partial replacement with artificial diets. A feeding strategy for D. marginatus should therefore follow those of other farmed soleids, although there will be a general delay in implementation due to slower development. Problems can thus be solved and improvements made by transferring technology from other soleids to D. marginatus.
- Full Text:
- Date Issued: 2014
- Authors: Thompson, Ernst Frederick
- Date: 2014
- Subjects: Flatfishes -- South Africa , Soleidae -- South Africa , Soleidae -- Larvae , Soleidae -- Larvae -- Feeding and feeds , Soleidae -- Larvae -- Physiology , Artemia
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:5364 , http://hdl.handle.net/10962/d1012982
- Description: The major bottleneck during the domestication of the white-margined sole Dagetichthys marginatus in South Africa has been low larval survival. The cause of this is not clear but considering current literature on flatfish culture and more specifically soleid culture, nutritional deficiencies are hypothesized to be the main possible cause. Following the importance of nutrition, the first aim of the research was to use an ontogenetic developmental approach to develop a species specific larval feeding strategy. Ontogenetic development of D. marginatus showed that weaning will take place at much later ages than other soleids currently being farmed. This makes the partial replacement of Artemia with a suitable inert diet in co-feeding strategies very important to cut the cost associated of live food production. This leads on to the second aim, in which an 'in vitro' approach was used to model the digestibility of Artemia, which could ultimately contribute towards designing inert feeds with similar digestibility characteristics to Artemia in the future. Obtaining nutrients from food is closely linked to the functional status of the digestive tract, the support organs and the external morphological characteristics required for the ingestion of live or inert feeds. Considering both morphological and physiological ontogenetic development, it is clear that D. marginatus follow a similar pattern to other soleids. Larvae can successfully feed on Artemia as early as 3 days after hatching but exhibit a slow metamorphosis into the juvenile stage when compared to other soleids. The absence of any detectable acidic protease activity during the first 45 days of development and the importance of exogenous enzymes from Artemia all points to limited capacity to digest artificial diets. Prior to modelling the 'in vitro' digestion of Artemia, digestive enzyme activity at different pH's were modelled using functional forms from the normal distributive category of functions. , As there is no substantiated information for the general effects of pH on enzyme activity in the literature for finfish larvae, three species occurring in the same bio-geographical region of Dagetichthys marginatus, namely Sarpa salpa, Diplodus sargus capensis and Argyrosomus japonicus were used to investigate this effect. The fitted parameters, namely the optimal pH and sigma (the slope around the optimal pH) showed two interesting results. When using a negative log likelihood ratio test to test for differences between species for a particular enzyme, the optimal pH for alkaline proteases (7.67), lipase (8.03), amylase (7.69) and phosphatase (9.84) activity was the same for all three species. Furthermore, the study illustrated the potential to detect dietary shifts during ontogenetic development based on changes in enzyme activity around the optimal pH using the sigma parameter. Sarpa salpa showed increased amylase activity and a decrease in protease activity around the optimal pH with increased size, corresponding to a change in diet from zooplankton to algae. The 'in vitro' modelling approach taken in this study was based on known enzyme interactions and dynamics which makes the results very interpretable. from Artemia is achieved based on gut evacuation time and enzyme levels. This 'in vitro' study furthermore clearly indicates the importance of exogenous enzymes from Artemia, contributing as much as 54 percent to protein digestion and 64 – 72 percent to carbohydrate digestion. This was however, only an initial investigation, and further expansion of the model is required to achieve a complete understanding of Artemia digestion and ultimately partial replacement with artificial diets. A feeding strategy for D. marginatus should therefore follow those of other farmed soleids, although there will be a general delay in implementation due to slower development. Problems can thus be solved and improvements made by transferring technology from other soleids to D. marginatus.
- Full Text:
- Date Issued: 2014
The dynamics of space use in some Lake Malawi fishes
- Authors: Robinson, Rosanna Lesley
- Date: 1996
- Subjects: Cichlids -- Nyasa, Lake Fishes -- Malawi Fishes -- Nyasa, Lake
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:5264 , http://hdl.handle.net/10962/d1005108
- Description: Behaviour and space utilisation of rock-dwelling cichlids were observed at Thumbi East Island, Lake Malawi. 1. Males of five species of the mbuna complex held long-term territories. Pseudotropheus elongatus "aggressive" vigorously defended a feeding area and sometimes a spawning site interspecifically, but did not feed in the peripheral part of their territory. Spawning sites of Pseudotropheus zebra, Pseudotropheus tropheops "orange chest", Labeotropheus fuelleborni, and Petrotilapia nigra were interspecifically-defended, while larger mating territories were defended against conspecific neighbours. Feeding areas were shared with many fish and often extended beyond the defended area. There was considerable variation in behaviour and space use within and between species and between times of day. 2. Non-territorial P. zebra used larger ranges than territorial conspecifics, and fed more on plankton, but individuals had preferred benthic feeding areas, often in conspecific territories. These 'floaters' were often aggressive. Both size and relative brightness independently predicted the outcome of aggressive interactions between floaters, and a site-specific dominance hierarchy was suggested, with some individuals appearing to be semi-territorial. 3. Males and females of 21 and 13 species respectively were found to establish temporary breeding territories. Overall breeding seasonality was bimodal, but reproductive timing and territory characteristics differed among species. Temporary territories had a considerable impact on the behaviour and habitat use of all resident mbuna species, even causing abandonment of territories. 4. Non-breeding Protomelas taeniolatus had limited home ranges, and showed little aggression. During the highly-synchronised reproductive season, males defended spawning sites and females fry-guarding territories. Most chases were directed towards the commonest fish, but predators were chased further and faster. Female behaviour changed over the guarding period. Females generally continued territorial defence after the brood had disappeared. Most broods contained fry of different sizes and species. Significant benefits were found for guarding females with clustered territories, but females did not appear to choose sites adjacent to conspecific parental females. 5. Territoriality in fish is taxonomically widespread and may serve several functions according to species, sex and developmental stage. It also varies according to genotype- and phenotype-limited strategies and short term costs and benefits. Territories may be simultaneously multifunctional.
- Full Text:
- Date Issued: 1996
- Authors: Robinson, Rosanna Lesley
- Date: 1996
- Subjects: Cichlids -- Nyasa, Lake Fishes -- Malawi Fishes -- Nyasa, Lake
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:5264 , http://hdl.handle.net/10962/d1005108
- Description: Behaviour and space utilisation of rock-dwelling cichlids were observed at Thumbi East Island, Lake Malawi. 1. Males of five species of the mbuna complex held long-term territories. Pseudotropheus elongatus "aggressive" vigorously defended a feeding area and sometimes a spawning site interspecifically, but did not feed in the peripheral part of their territory. Spawning sites of Pseudotropheus zebra, Pseudotropheus tropheops "orange chest", Labeotropheus fuelleborni, and Petrotilapia nigra were interspecifically-defended, while larger mating territories were defended against conspecific neighbours. Feeding areas were shared with many fish and often extended beyond the defended area. There was considerable variation in behaviour and space use within and between species and between times of day. 2. Non-territorial P. zebra used larger ranges than territorial conspecifics, and fed more on plankton, but individuals had preferred benthic feeding areas, often in conspecific territories. These 'floaters' were often aggressive. Both size and relative brightness independently predicted the outcome of aggressive interactions between floaters, and a site-specific dominance hierarchy was suggested, with some individuals appearing to be semi-territorial. 3. Males and females of 21 and 13 species respectively were found to establish temporary breeding territories. Overall breeding seasonality was bimodal, but reproductive timing and territory characteristics differed among species. Temporary territories had a considerable impact on the behaviour and habitat use of all resident mbuna species, even causing abandonment of territories. 4. Non-breeding Protomelas taeniolatus had limited home ranges, and showed little aggression. During the highly-synchronised reproductive season, males defended spawning sites and females fry-guarding territories. Most chases were directed towards the commonest fish, but predators were chased further and faster. Female behaviour changed over the guarding period. Females generally continued territorial defence after the brood had disappeared. Most broods contained fry of different sizes and species. Significant benefits were found for guarding females with clustered territories, but females did not appear to choose sites adjacent to conspecific parental females. 5. Territoriality in fish is taxonomically widespread and may serve several functions according to species, sex and developmental stage. It also varies according to genotype- and phenotype-limited strategies and short term costs and benefits. Territories may be simultaneously multifunctional.
- Full Text:
- Date Issued: 1996
Biology and management of the Cape gurnard, Chelidonichthys capensis (Order Scorpaeniformes, Family Triglidae) in South Africa
- Authors: McPhail, Amanda Sue
- Date: 1998
- Subjects: Scorpaeniformes
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5236 , http://hdl.handle.net/10962/d1005079 , Scorpaeniformes
- Description: The South African demersal trawl fishery, as with most trawl-directed fisheries worldwide, has a substantial bycatch component. With increasing commercial emphasis being placed on retained bycatch, an urgent need has arisen to investigate these species. In the past the bycatch component has received little research or management attention. Members of the gurnard family Triglidae make up up to 2.4 % of the South African hake-directed demersal catch and are thus considered an important bycatch species. The catch history and biology, including population structure, reproduction, feeding, age, growth and mortality, of the Cape gurnard, Chelidonichthys capensis, sampled from the Agulhas Bank, South Africa, were thus investigated. Males (mean TL = 366mm) were significantly smaller than females (mean TL = 411mm). The sex ratio was close to parity, males being more dominant in commercial trawls and less dominant in research trawls. Gonad maturation and gonadosomatic indices showed this species to have an extended spawning period with peaks in reproductive activity during September, January and April. First approximations of size at 50 % maturity were similar for females (349mm TL) and males (348mm TL) but differed significantly in terms of age (3.6 years and 4.6 years respectively). Otolith growth marks were validated as annuli using marginal zone analysis. The maximum age estimated was 16 years for a female of 675mm TL and recruitment to the commercial fishery was estimated as taking place in the fifth year of growth for both males and females. Gut content analysis showed C. capensis to be an opportunistic feeder preying preferentially on the benthic crustaceans Goneplax angulata and Mursia cristimanus. Landings from the commercial linefishery were insignificant whilst those for the commercial trawl fishery ranged from 500 tonnes to 3250 tonnes between 1984 to 1995, and indicated that this species forms an important component of the South African trawl fishery bycatch. A first approximation of fishing mortality (0.36 year⁻¹) for the inshore commercial trawl fishery was higher than that of natural mortality (0.25 year⁻¹) suggesting some fishing pressure on this species on the Agulhas Bank. However this fishing mortality value was significantly less than that for F₀·₁ (4.78 year⁻¹) that was estimated using a yield-per-recruit model.
- Full Text:
- Date Issued: 1998
- Authors: McPhail, Amanda Sue
- Date: 1998
- Subjects: Scorpaeniformes
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5236 , http://hdl.handle.net/10962/d1005079 , Scorpaeniformes
- Description: The South African demersal trawl fishery, as with most trawl-directed fisheries worldwide, has a substantial bycatch component. With increasing commercial emphasis being placed on retained bycatch, an urgent need has arisen to investigate these species. In the past the bycatch component has received little research or management attention. Members of the gurnard family Triglidae make up up to 2.4 % of the South African hake-directed demersal catch and are thus considered an important bycatch species. The catch history and biology, including population structure, reproduction, feeding, age, growth and mortality, of the Cape gurnard, Chelidonichthys capensis, sampled from the Agulhas Bank, South Africa, were thus investigated. Males (mean TL = 366mm) were significantly smaller than females (mean TL = 411mm). The sex ratio was close to parity, males being more dominant in commercial trawls and less dominant in research trawls. Gonad maturation and gonadosomatic indices showed this species to have an extended spawning period with peaks in reproductive activity during September, January and April. First approximations of size at 50 % maturity were similar for females (349mm TL) and males (348mm TL) but differed significantly in terms of age (3.6 years and 4.6 years respectively). Otolith growth marks were validated as annuli using marginal zone analysis. The maximum age estimated was 16 years for a female of 675mm TL and recruitment to the commercial fishery was estimated as taking place in the fifth year of growth for both males and females. Gut content analysis showed C. capensis to be an opportunistic feeder preying preferentially on the benthic crustaceans Goneplax angulata and Mursia cristimanus. Landings from the commercial linefishery were insignificant whilst those for the commercial trawl fishery ranged from 500 tonnes to 3250 tonnes between 1984 to 1995, and indicated that this species forms an important component of the South African trawl fishery bycatch. A first approximation of fishing mortality (0.36 year⁻¹) for the inshore commercial trawl fishery was higher than that of natural mortality (0.25 year⁻¹) suggesting some fishing pressure on this species on the Agulhas Bank. However this fishing mortality value was significantly less than that for F₀·₁ (4.78 year⁻¹) that was estimated using a yield-per-recruit model.
- Full Text:
- Date Issued: 1998
Towards a new approach for coastal governance with an assessment of the Plettenberg Bay nearshore linefisheries
- Smith, Martin Kyle Stratford
- Authors: Smith, Martin Kyle Stratford
- Date: 2006
- Subjects: Fishery management -- South Africa -- Plettenberg Bay , Fisheries -- South Africa -- Plettenberg Bay , Reef fishes -- South Africa -- Plettenberg Bay , Coastal zone management -- South Africa -- Plettenberg Bay
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5327 , http://hdl.handle.net/10962/d1005173 , Fishery management -- South Africa -- Plettenberg Bay , Fisheries -- South Africa -- Plettenberg Bay , Reef fishes -- South Africa -- Plettenberg Bay , Coastal zone management -- South Africa -- Plettenberg Bay
- Description: Under the guidance of the new coastal management policies within South Africa this thesis advocates a more integrated, co-operative approach to local coastal management. The project aimed to acquire baseline information on the local nearshore fishery and resource state and to propose a set of indicators that could be incorporated into the new management strategy. To gather the required information the project was split into two parts: 1) An assessment of the local linefisheries and 2) A comparative study of the reef fish community structure between exploited and unexploited reefs. The local linefisheries were assessed through the use of launch records, commercial catch records, access point and boat based surveys. A questionnaire was used to gather data on catch and effort, fisher demographics, fisher attitudes towards and knowledge of the current management regulations, assess the efficacy of the fisheries inspectorate and highlight spatial areas of fishing pressure. A total of 252 interviews and catch inspections were conducted. Total effort for the ski-boat fishery estimated from the access point survey was 890 boat days.year⁻¹ or 3560 fisher days. year⁻¹ compared to 736 boat days.year⁻¹ or 2944 fisher days. year⁻¹ recorded in the launch records. Effort was seasonal with greater pressure occurring over the summer holiday period. Analysis of the catch showed that Merluccius capensis, Argyrozona argyrozona, Argyrosomus inodorus, Chrysoblephus laticeps and Atractoscion aequidens were the most frequently caught species. The overall CPUE was 3.00±5.54kg.fisher⁻¹.day⁻¹ or 4.71±4.117 fish.fisher⁻¹.day⁻¹. Estimated targeted CPUE was 0.91±0.67kg.fisher⁻¹.day⁻¹ or 0.97±0.77 fish.fisher⁻¹.day⁻¹ for C. laticeps, 8.47±8.57kg.fisher⁻¹.day⁻¹ or 1.24±1.16 fish.fisher⁻¹.day⁻¹ for A. aequidens and 2.05±3.78kg.fisher⁻¹.day⁻¹ or 1.10±1.80 fish.fisher⁻¹.day⁻¹ for A. inodorus. Issues identified included poor fisher knowledge regarding linefish regulations, the low occurrence of fishery inspections and a limited degree of noncompliance. Although most fishers supported the current linefish management regulations, when tested on the size limits, bag limits and closed seasons of their target species a high proportion of fishers did not know the regulations (recreational 64%, charter 53%, commercial 42%). Furthermore only 27% of fishers had had their catch inspected whilst fishing in Plettenberg Bay and the majority of these had only been inspected once. Just over half the interviewees (60%) indicated that fishing had deteriorated within Plettenberg Bay with fewer and smaller fish being caught. The most common causes cited for this decline were commercial and recreational overfishing respectively. Underwater point counts and experimental angling were used to rapidly assess the state of the reef fish resource in Plettenberg Bay through a comparative study of the community structure between two exploited sites in Plettenberg Bay and two protected sites within the Tsitsikamma National Park. Generalized linear modeling showed that relative density of certain species was significantly different between the protected reefs inside the TNP and those exploited reefs within Plettenberg Bay. Both P. rupestris and C. laticeps had greater densities within the protected area whilst Chisquared tests showed that the size frequency distributions were significantly different with larger size-classes and the maximum size of fish greater within the reserve. These trends were noted with both the underwater visual surveys and the experimental angling. Multi-dimensional scaling and cluster analysis showed that there was an overall difference in the community structure between the study sites. It is hypothesised that through removal of key reef species and larger individuals that fishing has directly and indirectly affected the overall community structure. Within a simple framework based on ecological, institutional and social sustainability domains along with the results of the study area, a set of indicators is proposed and the sustainability of the local fishery scored within a rapid assessment matrix. The socio-economic domain scored the highest (83%) whilst the institutional domain scored the lowest (8.3%) and the ecological domain scored 25%, giving a total sustainability score of 38.8%. The results of this matrix show that at present the local fishery is non-sustainable and in need of greater management. By synthesizing papers dealing with and based on the concepts involved in Integrated Coastal Management, a structured approach is proposed to developing and implementing more holistic local coastal governance. It is envisaged that the framework to implement such an approach should be through the development of a local Coastal Management Plan and a subsidiary Bay Management Plan. Although stakeholder participation and representation is an essential component in the development of these plans, it is recommended that the local municipality should be the lead agent and incorporate the plans into the local Integrated Development and Spatial Plans thereby gaining long term local government support.
- Full Text:
- Date Issued: 2006
- Authors: Smith, Martin Kyle Stratford
- Date: 2006
- Subjects: Fishery management -- South Africa -- Plettenberg Bay , Fisheries -- South Africa -- Plettenberg Bay , Reef fishes -- South Africa -- Plettenberg Bay , Coastal zone management -- South Africa -- Plettenberg Bay
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5327 , http://hdl.handle.net/10962/d1005173 , Fishery management -- South Africa -- Plettenberg Bay , Fisheries -- South Africa -- Plettenberg Bay , Reef fishes -- South Africa -- Plettenberg Bay , Coastal zone management -- South Africa -- Plettenberg Bay
- Description: Under the guidance of the new coastal management policies within South Africa this thesis advocates a more integrated, co-operative approach to local coastal management. The project aimed to acquire baseline information on the local nearshore fishery and resource state and to propose a set of indicators that could be incorporated into the new management strategy. To gather the required information the project was split into two parts: 1) An assessment of the local linefisheries and 2) A comparative study of the reef fish community structure between exploited and unexploited reefs. The local linefisheries were assessed through the use of launch records, commercial catch records, access point and boat based surveys. A questionnaire was used to gather data on catch and effort, fisher demographics, fisher attitudes towards and knowledge of the current management regulations, assess the efficacy of the fisheries inspectorate and highlight spatial areas of fishing pressure. A total of 252 interviews and catch inspections were conducted. Total effort for the ski-boat fishery estimated from the access point survey was 890 boat days.year⁻¹ or 3560 fisher days. year⁻¹ compared to 736 boat days.year⁻¹ or 2944 fisher days. year⁻¹ recorded in the launch records. Effort was seasonal with greater pressure occurring over the summer holiday period. Analysis of the catch showed that Merluccius capensis, Argyrozona argyrozona, Argyrosomus inodorus, Chrysoblephus laticeps and Atractoscion aequidens were the most frequently caught species. The overall CPUE was 3.00±5.54kg.fisher⁻¹.day⁻¹ or 4.71±4.117 fish.fisher⁻¹.day⁻¹. Estimated targeted CPUE was 0.91±0.67kg.fisher⁻¹.day⁻¹ or 0.97±0.77 fish.fisher⁻¹.day⁻¹ for C. laticeps, 8.47±8.57kg.fisher⁻¹.day⁻¹ or 1.24±1.16 fish.fisher⁻¹.day⁻¹ for A. aequidens and 2.05±3.78kg.fisher⁻¹.day⁻¹ or 1.10±1.80 fish.fisher⁻¹.day⁻¹ for A. inodorus. Issues identified included poor fisher knowledge regarding linefish regulations, the low occurrence of fishery inspections and a limited degree of noncompliance. Although most fishers supported the current linefish management regulations, when tested on the size limits, bag limits and closed seasons of their target species a high proportion of fishers did not know the regulations (recreational 64%, charter 53%, commercial 42%). Furthermore only 27% of fishers had had their catch inspected whilst fishing in Plettenberg Bay and the majority of these had only been inspected once. Just over half the interviewees (60%) indicated that fishing had deteriorated within Plettenberg Bay with fewer and smaller fish being caught. The most common causes cited for this decline were commercial and recreational overfishing respectively. Underwater point counts and experimental angling were used to rapidly assess the state of the reef fish resource in Plettenberg Bay through a comparative study of the community structure between two exploited sites in Plettenberg Bay and two protected sites within the Tsitsikamma National Park. Generalized linear modeling showed that relative density of certain species was significantly different between the protected reefs inside the TNP and those exploited reefs within Plettenberg Bay. Both P. rupestris and C. laticeps had greater densities within the protected area whilst Chisquared tests showed that the size frequency distributions were significantly different with larger size-classes and the maximum size of fish greater within the reserve. These trends were noted with both the underwater visual surveys and the experimental angling. Multi-dimensional scaling and cluster analysis showed that there was an overall difference in the community structure between the study sites. It is hypothesised that through removal of key reef species and larger individuals that fishing has directly and indirectly affected the overall community structure. Within a simple framework based on ecological, institutional and social sustainability domains along with the results of the study area, a set of indicators is proposed and the sustainability of the local fishery scored within a rapid assessment matrix. The socio-economic domain scored the highest (83%) whilst the institutional domain scored the lowest (8.3%) and the ecological domain scored 25%, giving a total sustainability score of 38.8%. The results of this matrix show that at present the local fishery is non-sustainable and in need of greater management. By synthesizing papers dealing with and based on the concepts involved in Integrated Coastal Management, a structured approach is proposed to developing and implementing more holistic local coastal governance. It is envisaged that the framework to implement such an approach should be through the development of a local Coastal Management Plan and a subsidiary Bay Management Plan. Although stakeholder participation and representation is an essential component in the development of these plans, it is recommended that the local municipality should be the lead agent and incorporate the plans into the local Integrated Development and Spatial Plans thereby gaining long term local government support.
- Full Text:
- Date Issued: 2006
The integration of effluent treatment using constructed wetlands, with crop production and aquaculture
- Authors: de Jong, Martyn
- Date: 2019
- Subjects: Recycling (Waste, etc.) , Brewery waste , Sewage -- Purification , Beets , Mozambique tilapia
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/95767 , vital:31197
- Description: Breweries are major consumers of water and produce nutrient rich wastewater. Therefore, it is important to research technologies that optimise the reuse and recycling of this waste. This study compared different constructed wetlands (CWs) in terms of their potential for cleaning brewery effluent and simultaneously producing crops Beta vulgaris and fish Oreochromis mossambicus. Filling and draining times (FDT; 15 min, 30 min and 60 min) in tidal CWs were compared in Experiment 1. The 15 min FDT (6.52 ± 0.09 mg/l) and 30 min FDT (5.74 ± 0.09 mg/l) had higher dissolved oxygen (DO) than the 60 min FDT (5.40 ± 0.09 mg/l; p<0.05). This resulted in the 15 and 30 min FDT treatments reaching ammonia effluent discharge standards sooner than the 60 min FDT. Total plant harvest increased with increasing FDT; therefore, 15 min FDT was used as the FDT in tidal treatments in the following experiments. The aerated CW (5.81 ± 0.07 mg/l) and tidal CW (5.67 ± 0.07 mg/l) treatments had higher DO concentrations than the unaerated CW treatment (3.76 ± 0.07 mg/l; p<0.05) in Experiment 2. This resulted in lower ammonia concentrations on day 5 in the aerated and tidal CWs compared with the unaerated treatment (p<0.05). The tidal CW (23.97 ± 2.57 kg) had a total harvest that was approximately four times higher than the unaerated CW (p<0.05), which had the highest frequency of chlorosis and plant mortality; and was unable to treat ammonia to discharge standards. In Experiment 3, the aerated and tidal CW were compared with municipal-water as water sources for aquaculture. There were no differences in fish growth (p > 0.05). However, there were differences in water quality; with the municipal treatment having the lowest pH, EC and nitrate concentration (p<0.05); but all water quality parameters remained in a range suitably for fish production. Due to the tidal CW having the highest plant harvest and lowest frequency of chlorosis and mortality; it was the most suitable CW technology to clean the brewery effluent, and to produce B. vulgaris and water that could be used downstream in aquaculture.
- Full Text:
- Date Issued: 2019
- Authors: de Jong, Martyn
- Date: 2019
- Subjects: Recycling (Waste, etc.) , Brewery waste , Sewage -- Purification , Beets , Mozambique tilapia
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/95767 , vital:31197
- Description: Breweries are major consumers of water and produce nutrient rich wastewater. Therefore, it is important to research technologies that optimise the reuse and recycling of this waste. This study compared different constructed wetlands (CWs) in terms of their potential for cleaning brewery effluent and simultaneously producing crops Beta vulgaris and fish Oreochromis mossambicus. Filling and draining times (FDT; 15 min, 30 min and 60 min) in tidal CWs were compared in Experiment 1. The 15 min FDT (6.52 ± 0.09 mg/l) and 30 min FDT (5.74 ± 0.09 mg/l) had higher dissolved oxygen (DO) than the 60 min FDT (5.40 ± 0.09 mg/l; p<0.05). This resulted in the 15 and 30 min FDT treatments reaching ammonia effluent discharge standards sooner than the 60 min FDT. Total plant harvest increased with increasing FDT; therefore, 15 min FDT was used as the FDT in tidal treatments in the following experiments. The aerated CW (5.81 ± 0.07 mg/l) and tidal CW (5.67 ± 0.07 mg/l) treatments had higher DO concentrations than the unaerated CW treatment (3.76 ± 0.07 mg/l; p<0.05) in Experiment 2. This resulted in lower ammonia concentrations on day 5 in the aerated and tidal CWs compared with the unaerated treatment (p<0.05). The tidal CW (23.97 ± 2.57 kg) had a total harvest that was approximately four times higher than the unaerated CW (p<0.05), which had the highest frequency of chlorosis and plant mortality; and was unable to treat ammonia to discharge standards. In Experiment 3, the aerated and tidal CW were compared with municipal-water as water sources for aquaculture. There were no differences in fish growth (p > 0.05). However, there were differences in water quality; with the municipal treatment having the lowest pH, EC and nitrate concentration (p<0.05); but all water quality parameters remained in a range suitably for fish production. Due to the tidal CW having the highest plant harvest and lowest frequency of chlorosis and mortality; it was the most suitable CW technology to clean the brewery effluent, and to produce B. vulgaris and water that could be used downstream in aquaculture.
- Full Text:
- Date Issued: 2019
Contribution towards the development of a management plan for the baitboat and sport fishery for tuna in South Africa
- Authors: Newcombe, Hylton Cecil
- Date: 2012
- Subjects: Tuna -- South Africa , Tuna fishing -- South Africa , Fishery management -- South Africa , Fishery management -- Economic aspects -- South Africa , Tuna fisheries -- Catch effort -- South Africa , Tuna fisheries -- Economic aspects -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5249 , http://hdl.handle.net/10962/d1005092 , Tuna -- South Africa , Tuna fishing -- South Africa , Fishery management -- South Africa , Fishery management -- Economic aspects -- South Africa , Tuna fisheries -- Catch effort -- South Africa , Tuna fisheries -- Economic aspects -- South Africa
- Description: Tuna are of significant global economic importance and a prime food source. Increased levels of fishing have resulted in many stocks being under threat and a number of species are considered to be overfished. The South African tuna industry has had limited management attention from the South African fisheries management agency. A recent development has been an increase in the number of tuna caught by small vessels that target the fresh tuna market in South Africa and overseas. This has highlighted the importance of developing a holistic management plan for the sector and creating an awareness, among vessel owners, of the importance of compliance with initiatives such as the Marine Stewardship Council (MSC). The South African tuna fishery comprises three sectors: baitboat, sport and longline, all of which are currently in need of acquiring more biological and fisheries data. This project was initiated to collate existing information and to collect additional information where possible. This encompassed a qualitative and quantitative assessment of the size and shape of the tuna fishing industry, which included estimates of total catch, effort, catch-per-unit-of-effort (CPUE) and stock structure (obtained through comparative estimates of age and growth), as well as socio-economic and economic information. A technique involving an examination of specific vertebrae was used to obtain age-growth information for T. albacares. These data were used to estimate von Bertalanffy (VBGF) growth parameters: F 2 1. , k 0.1 , and t₀ -0. 1 year. No significant differences in growth parameters were found in yellowfin tuna (Thunnus albacares) from different localities around the South African coast, i.e. from the south eastern Atlantic and the south western Indian Ocean. In addition, growth did not differ between South Africa and other regions (Draganic and Pelzcarski 1984, Fonteneau 1980, Gascuel et al. 1992, LeGuen and Sakagawa 1973, Lehodey and Leroy 1999, Lessa and Duarte-Neto 2004, Shuford et al. 2007, Stequert et al. 1996, Wild 1986, Yang et al. 1969). Further substantiation of the above-mentioned observations was found by recording differences in the sizes of fish caught in the inshore (baitboat and sport fishery vessels) and offshore (large pelagic longline vessels) sectors of South African tuna fisheries. A significant difference between the regions — in terms of the size of fish caught inshore — was noted, with mostly-juvenile fish being caught in KwaZulu-Natal (5.4 ± 3.5kg), sub-adult fish in the Eastern Cape (26.2 ± 13.4kg), and adult fish in the Western Cape (42.3 ± 14.4kg). Since mostly-adult fish were caught offshore by longliners, with no significant differences between regions, it is however possible th at adult fish predominantly inhabit the offshore region. Yellowfin tuna caught by the large pelagic longline fishery in the three managerial zones (A, B and C) were predominantly adult fish of similar size, namely Zone A: 38.9 ± 6.9kg; Zone B: 28.7 ± 4.6kg, and Zone C: 36.0 ± 5.1kg. The recreational ski boat sport fishery has remained stable, in terms of participation, consisting mostly of white middle aged males in the top 25% of household income distribution, having either permanent occupational status or being retired. Fishers within this sector are willing to incur great expense to partake in the fishery and they provide an important economic contribution to coastal towns, particularly in the Eastern Cape. The total catch (of 83t) of yellowfin tuna by the competitive sport fishery within the Western and Eastern Cape regions was considerably lower than that of commercial tuna baitboat catches, which amounted to 186t, and the large pelagic longline sector that caught t in 200. It is however likely that the competitive sport fishery's total yellowfin tuna catch (of 83t in 2009) of the Eastern and Western Cape competitive sport fishery was considerably less than the total yellowfin tuna catches of the whole South African deep-sea sport fishery. Longfin tuna are the primary target species of South Africa‘s baitboat fisheries, comprising an average of 86% of the total catch and generating ZAR49 million in employment income in 2002. South Africa was responsible for 20% of the total longfin tuna annual yield in 2004 in the southern Atlantic Ocean, behind Taiwan with 59%. However, yellowfin tuna only contributes a small percentage towards total catches (8.4 ± 8.2% between 1995 and 2009), generating ZAR1.3 million in employment income in 2002. Of the four vessel categories comprising the tuna baitboat fishery, ski boats had the highest yellowfin tuna CPUE in 2009 (117 ± 62 kg.vessel⁻¹.day⁻¹) and the lowest effort. The ski boats sector is the most opportunistic fishery as they are only active when either longfin or yellowfin tuna are in high abundance. At such times catches are guaranteed, so can be expected to offset expenses. In 2009 the CPUE for yellowfin tuna for 15–19m vessels and freezer deckboats was 12 ± 20kg.vessel⁻¹.day⁻¹ and 3 ± 6kg.vessel⁻¹.day⁻¹, respectively. These vessels specifically target longfin tuna when they are in abundance. Since the start of the tuna baitboat fishery in 1995, there has been a substantial increase in the number of new entrants. In 2002 this sector had a fleet size of 82 vessels with a capital value of ZAR163 million and a total employment income of ZAR58 million, employing 2 173 fishers, of which 87% were black African. The commercial tuna baitboat fleet has subsequently grown to 200 vessels and 3600 crew, with 110 active vessels fishing for a combined fleet average of 46 days per year. There are a high number of owner-operated vessels. Since 2007 the fishery's profit to cost ratio has been low due to the low abundance of tuna stocks off the coast of South Africa, which has resulted in poor catch returns, placing economic pressure on the fishery. The baitboat industry is a low-profit-margin fishery with a total net catch value worth ZAR90 million in 2009 (Feike 2010). The abundance of yellowfin tuna influences profit margins, with very high profits being made when abundance and catches are high. The large pelagic longline fishery has a total allowable effort of 43 vessels of which only 30 vessels fished during 2009, when a reported 766t of yellowfin tuna were caught, representing a total tonnage far in excess of that obtained by the combined effort of the baitboat and sport fishery. It is, however, assumed that considerable underreporting of catches takes place within this fishery, which means that the estimated total net catch value of ZAR100 million could, in fact, be much higher. Such underreporting of catches is of great concern for this fishery, as is the high bycatch of Chondricthians spp. that significantly outweighs imposed regulatory limits (DEAT 2007). The present study demonstrates the current lack of comprehensive catch and effort data for the sport, baitboat and longline fisheries as well as the serious limitations and flaws associated with current databases. Results from the present study have drawn attention to a number of high-priority research needs, as outlined below. (1) A major lack of comprehensive catch and effort data for the sport fishery, which can be rectified by focussing on obtaining more competition data, as well as high-quality catch and effort and socio-economic information, as opposed to relying on information from non-club anglers (Gartside et al. 1999, Williams 2003, Cass-Calay 2008). Acquisition of such data is relatively inexpensive: the location of organized clubs and their frequent competition meetings provide widespread coverage along the Southern African coastline. Such data acquisition efforts have the potential to provide reliable information on spatial catch trends. (2) Validation of vessel catch return data is required for commercial fisheries and on some recent data that has emerged from studies of catch rates and trends for target species, particularly in the longline fishery. In this context it should be noted that the most recent peer-reviewed publications on this exploratory fishery were published more than a decade ago (Kroese 1999, Penny and Griffiths 1999). Additional studies need to be undertaken and journal articles published on the current stock status of South African catches of yellowfin and bigeye tuna and swordfish.
- Full Text:
- Date Issued: 2012
- Authors: Newcombe, Hylton Cecil
- Date: 2012
- Subjects: Tuna -- South Africa , Tuna fishing -- South Africa , Fishery management -- South Africa , Fishery management -- Economic aspects -- South Africa , Tuna fisheries -- Catch effort -- South Africa , Tuna fisheries -- Economic aspects -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5249 , http://hdl.handle.net/10962/d1005092 , Tuna -- South Africa , Tuna fishing -- South Africa , Fishery management -- South Africa , Fishery management -- Economic aspects -- South Africa , Tuna fisheries -- Catch effort -- South Africa , Tuna fisheries -- Economic aspects -- South Africa
- Description: Tuna are of significant global economic importance and a prime food source. Increased levels of fishing have resulted in many stocks being under threat and a number of species are considered to be overfished. The South African tuna industry has had limited management attention from the South African fisheries management agency. A recent development has been an increase in the number of tuna caught by small vessels that target the fresh tuna market in South Africa and overseas. This has highlighted the importance of developing a holistic management plan for the sector and creating an awareness, among vessel owners, of the importance of compliance with initiatives such as the Marine Stewardship Council (MSC). The South African tuna fishery comprises three sectors: baitboat, sport and longline, all of which are currently in need of acquiring more biological and fisheries data. This project was initiated to collate existing information and to collect additional information where possible. This encompassed a qualitative and quantitative assessment of the size and shape of the tuna fishing industry, which included estimates of total catch, effort, catch-per-unit-of-effort (CPUE) and stock structure (obtained through comparative estimates of age and growth), as well as socio-economic and economic information. A technique involving an examination of specific vertebrae was used to obtain age-growth information for T. albacares. These data were used to estimate von Bertalanffy (VBGF) growth parameters: F 2 1. , k 0.1 , and t₀ -0. 1 year. No significant differences in growth parameters were found in yellowfin tuna (Thunnus albacares) from different localities around the South African coast, i.e. from the south eastern Atlantic and the south western Indian Ocean. In addition, growth did not differ between South Africa and other regions (Draganic and Pelzcarski 1984, Fonteneau 1980, Gascuel et al. 1992, LeGuen and Sakagawa 1973, Lehodey and Leroy 1999, Lessa and Duarte-Neto 2004, Shuford et al. 2007, Stequert et al. 1996, Wild 1986, Yang et al. 1969). Further substantiation of the above-mentioned observations was found by recording differences in the sizes of fish caught in the inshore (baitboat and sport fishery vessels) and offshore (large pelagic longline vessels) sectors of South African tuna fisheries. A significant difference between the regions — in terms of the size of fish caught inshore — was noted, with mostly-juvenile fish being caught in KwaZulu-Natal (5.4 ± 3.5kg), sub-adult fish in the Eastern Cape (26.2 ± 13.4kg), and adult fish in the Western Cape (42.3 ± 14.4kg). Since mostly-adult fish were caught offshore by longliners, with no significant differences between regions, it is however possible th at adult fish predominantly inhabit the offshore region. Yellowfin tuna caught by the large pelagic longline fishery in the three managerial zones (A, B and C) were predominantly adult fish of similar size, namely Zone A: 38.9 ± 6.9kg; Zone B: 28.7 ± 4.6kg, and Zone C: 36.0 ± 5.1kg. The recreational ski boat sport fishery has remained stable, in terms of participation, consisting mostly of white middle aged males in the top 25% of household income distribution, having either permanent occupational status or being retired. Fishers within this sector are willing to incur great expense to partake in the fishery and they provide an important economic contribution to coastal towns, particularly in the Eastern Cape. The total catch (of 83t) of yellowfin tuna by the competitive sport fishery within the Western and Eastern Cape regions was considerably lower than that of commercial tuna baitboat catches, which amounted to 186t, and the large pelagic longline sector that caught t in 200. It is however likely that the competitive sport fishery's total yellowfin tuna catch (of 83t in 2009) of the Eastern and Western Cape competitive sport fishery was considerably less than the total yellowfin tuna catches of the whole South African deep-sea sport fishery. Longfin tuna are the primary target species of South Africa‘s baitboat fisheries, comprising an average of 86% of the total catch and generating ZAR49 million in employment income in 2002. South Africa was responsible for 20% of the total longfin tuna annual yield in 2004 in the southern Atlantic Ocean, behind Taiwan with 59%. However, yellowfin tuna only contributes a small percentage towards total catches (8.4 ± 8.2% between 1995 and 2009), generating ZAR1.3 million in employment income in 2002. Of the four vessel categories comprising the tuna baitboat fishery, ski boats had the highest yellowfin tuna CPUE in 2009 (117 ± 62 kg.vessel⁻¹.day⁻¹) and the lowest effort. The ski boats sector is the most opportunistic fishery as they are only active when either longfin or yellowfin tuna are in high abundance. At such times catches are guaranteed, so can be expected to offset expenses. In 2009 the CPUE for yellowfin tuna for 15–19m vessels and freezer deckboats was 12 ± 20kg.vessel⁻¹.day⁻¹ and 3 ± 6kg.vessel⁻¹.day⁻¹, respectively. These vessels specifically target longfin tuna when they are in abundance. Since the start of the tuna baitboat fishery in 1995, there has been a substantial increase in the number of new entrants. In 2002 this sector had a fleet size of 82 vessels with a capital value of ZAR163 million and a total employment income of ZAR58 million, employing 2 173 fishers, of which 87% were black African. The commercial tuna baitboat fleet has subsequently grown to 200 vessels and 3600 crew, with 110 active vessels fishing for a combined fleet average of 46 days per year. There are a high number of owner-operated vessels. Since 2007 the fishery's profit to cost ratio has been low due to the low abundance of tuna stocks off the coast of South Africa, which has resulted in poor catch returns, placing economic pressure on the fishery. The baitboat industry is a low-profit-margin fishery with a total net catch value worth ZAR90 million in 2009 (Feike 2010). The abundance of yellowfin tuna influences profit margins, with very high profits being made when abundance and catches are high. The large pelagic longline fishery has a total allowable effort of 43 vessels of which only 30 vessels fished during 2009, when a reported 766t of yellowfin tuna were caught, representing a total tonnage far in excess of that obtained by the combined effort of the baitboat and sport fishery. It is, however, assumed that considerable underreporting of catches takes place within this fishery, which means that the estimated total net catch value of ZAR100 million could, in fact, be much higher. Such underreporting of catches is of great concern for this fishery, as is the high bycatch of Chondricthians spp. that significantly outweighs imposed regulatory limits (DEAT 2007). The present study demonstrates the current lack of comprehensive catch and effort data for the sport, baitboat and longline fisheries as well as the serious limitations and flaws associated with current databases. Results from the present study have drawn attention to a number of high-priority research needs, as outlined below. (1) A major lack of comprehensive catch and effort data for the sport fishery, which can be rectified by focussing on obtaining more competition data, as well as high-quality catch and effort and socio-economic information, as opposed to relying on information from non-club anglers (Gartside et al. 1999, Williams 2003, Cass-Calay 2008). Acquisition of such data is relatively inexpensive: the location of organized clubs and their frequent competition meetings provide widespread coverage along the Southern African coastline. Such data acquisition efforts have the potential to provide reliable information on spatial catch trends. (2) Validation of vessel catch return data is required for commercial fisheries and on some recent data that has emerged from studies of catch rates and trends for target species, particularly in the longline fishery. In this context it should be noted that the most recent peer-reviewed publications on this exploratory fishery were published more than a decade ago (Kroese 1999, Penny and Griffiths 1999). Additional studies need to be undertaken and journal articles published on the current stock status of South African catches of yellowfin and bigeye tuna and swordfish.
- Full Text:
- Date Issued: 2012
Evaluating the trophic ecology and feeding habits of three divergent lineages of Sandelia bainsii (Teleostei: Anabantidae), from the Eastern Cape Rivers using stable isotope analysis
- Authors: Nkomo, Thulisile
- Date: 2022-10-14
- Subjects: Uncatalogued
- Language: English
- Type: Academic theses , Master's theses , text
- Identifier: http://hdl.handle.net/10962/364984 , vital:65667
- Description: Despite supporting a disproportionately large fraction of the global biodiversity, freshwater ecosystems are ranked as the most highly threatened habitats on the planet, ahead of both terrestrial and marine ecosystems. Many regions are still characterised by limited knowledge regarding the taxonomy and ecology of freshwater fish taxa. The need for ecological information is increasingly becoming important due to the discovery of new species and unique lineages, which require conservation management. The aim of this study was thus to evaluate the trophic ecology and feeding habits of the three recently described and divergent Sandelia bainsii lineages, namely Sandelia sp. ‘bainsii Kowie’ from the Great Fish River, Sandelia sp. ‘bainsii Keiskamma’ found in the Keiskamma River, and Sandelia sp. ‘bainsii Buffalo’ confined to the Buffalo River system in the Amathole-Winterberg freshwater ecoregion in the Eastern Cape Province, South Africa. Based on the allopatric distribution and the generalist feeding habits of these lineages, this thesis postulated that these three lineages were likely to show similar trophic ecology patterns, different dietary composition and as a result would have variable trophic positioning in the different river systems. Therefore, the primary objectives were to use stable isotope analysis to (1) evaluate the food web patterns of the river systems where the three S. bainsii lineages occurred, and (2) determine dietary source contributions for the three lineages using isotope mixing models. The results revealed general variability and significant differences in the δ13C and δ¹⁵N values for the different basal resources, macroinvertebrates and fish community across the different headwater streams. Within and across the different rivers, the S. bainsii lineages exhibited variable isotopic niche sizes, which appeared to coincide with the variation in the isotopic composition of the individual communities. Furthermore, these lineages did not exhibit any discernible patterns in their interspecific interactions in different habitats. This suggests that these lineages’ isotopic niche patterns were largely influenced by spatial differences in both trophic resources and probable interactions with contraspecifics. Assessment of trophic positions of S. bainsii lineages showed that the three lineages had higher trophic positions than other co-occurring species at most sites, except in the Buffalo River. This suggest that the different lineages were generally top predators in the different river systems. Although S. ‘bainsii Buffalo’ had a lower trophic position compared to other co-occurring species, its trophic position was generally characterised by high uncertainty, indicating that this lineage was likely influenced by the occurrence of diet sources that had highly variable stable isotope values. Findings from stable isotope mixing models revealed that the diet sources varied from the dominance of either single diet source in the Fairburn and Tyume 1 River to the importance of multiple prey sources from the Lushington and Kat River system. This suggests that despite being a top predator at most sites, the diet sources for the different lineages were highly variable. The patterns observed in this study did not appear to be attributed to species divergence possibly caused by allopatric speciation, but rather differences in food web characteristics of the river systems, as well as the lineages interspecific relationships and their generalized feeding strategies. Understanding the trophic dynamics of these lineages will assist in implementing effective conservation strategies and policies dealing with narrowly distributed species that are threatened by habitat fragmentation and invasion of piscivorous fish. , Thesis (MSc) -- Faculty of Science, Ichthyology and Fisheries Science, 2022
- Full Text:
- Date Issued: 2022-10-14
- Authors: Nkomo, Thulisile
- Date: 2022-10-14
- Subjects: Uncatalogued
- Language: English
- Type: Academic theses , Master's theses , text
- Identifier: http://hdl.handle.net/10962/364984 , vital:65667
- Description: Despite supporting a disproportionately large fraction of the global biodiversity, freshwater ecosystems are ranked as the most highly threatened habitats on the planet, ahead of both terrestrial and marine ecosystems. Many regions are still characterised by limited knowledge regarding the taxonomy and ecology of freshwater fish taxa. The need for ecological information is increasingly becoming important due to the discovery of new species and unique lineages, which require conservation management. The aim of this study was thus to evaluate the trophic ecology and feeding habits of the three recently described and divergent Sandelia bainsii lineages, namely Sandelia sp. ‘bainsii Kowie’ from the Great Fish River, Sandelia sp. ‘bainsii Keiskamma’ found in the Keiskamma River, and Sandelia sp. ‘bainsii Buffalo’ confined to the Buffalo River system in the Amathole-Winterberg freshwater ecoregion in the Eastern Cape Province, South Africa. Based on the allopatric distribution and the generalist feeding habits of these lineages, this thesis postulated that these three lineages were likely to show similar trophic ecology patterns, different dietary composition and as a result would have variable trophic positioning in the different river systems. Therefore, the primary objectives were to use stable isotope analysis to (1) evaluate the food web patterns of the river systems where the three S. bainsii lineages occurred, and (2) determine dietary source contributions for the three lineages using isotope mixing models. The results revealed general variability and significant differences in the δ13C and δ¹⁵N values for the different basal resources, macroinvertebrates and fish community across the different headwater streams. Within and across the different rivers, the S. bainsii lineages exhibited variable isotopic niche sizes, which appeared to coincide with the variation in the isotopic composition of the individual communities. Furthermore, these lineages did not exhibit any discernible patterns in their interspecific interactions in different habitats. This suggests that these lineages’ isotopic niche patterns were largely influenced by spatial differences in both trophic resources and probable interactions with contraspecifics. Assessment of trophic positions of S. bainsii lineages showed that the three lineages had higher trophic positions than other co-occurring species at most sites, except in the Buffalo River. This suggest that the different lineages were generally top predators in the different river systems. Although S. ‘bainsii Buffalo’ had a lower trophic position compared to other co-occurring species, its trophic position was generally characterised by high uncertainty, indicating that this lineage was likely influenced by the occurrence of diet sources that had highly variable stable isotope values. Findings from stable isotope mixing models revealed that the diet sources varied from the dominance of either single diet source in the Fairburn and Tyume 1 River to the importance of multiple prey sources from the Lushington and Kat River system. This suggests that despite being a top predator at most sites, the diet sources for the different lineages were highly variable. The patterns observed in this study did not appear to be attributed to species divergence possibly caused by allopatric speciation, but rather differences in food web characteristics of the river systems, as well as the lineages interspecific relationships and their generalized feeding strategies. Understanding the trophic dynamics of these lineages will assist in implementing effective conservation strategies and policies dealing with narrowly distributed species that are threatened by habitat fragmentation and invasion of piscivorous fish. , Thesis (MSc) -- Faculty of Science, Ichthyology and Fisheries Science, 2022
- Full Text:
- Date Issued: 2022-10-14
The taxonomy, life-history and population dynamics of blacktail, Diplodus Capensis (Perciformes: Sparidae), in southern Angola
- Authors: Richardson, Timothy John
- Date: 2010
- Subjects: Diplodus -- Angola , Perciformes -- Angola , Sparidae -- Angola , Fish populations -- Angola , Fishes -- Classification -- Angola , Fisheries -- Angola
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5324 , http://hdl.handle.net/10962/d1005170 , Diplodus -- Angola , Perciformes -- Angola , Sparidae -- Angola , Fish populations -- Angola , Fishes -- Classification -- Angola , Fisheries -- Angola
- Description: The blacktail, Diplodus capensis, is an inshore sparid fish distributed from Mozambique to Angola. This species forms an important component of coastal fisheries within its distribution, one being the subsistence handline fishery in southern Angola. With this fishery being critically important to the livelihoods of local communities, a biological study and stock assessment was conducted to provide information for the management of this species in southern Angola. However, with molecular evidence suggesting that the Benguela current may have separated the southern African populations of many inshore fish species over two million years ago, a morphological, taxonomic analysis was considered necessary to first investigate whether there was evidence for allopatry in this species. A total of 46 morphometric measurements and 18 counts were carried out on specimens collected from various locations in southern Angola and South Africa. Results were analysed using multi-dimensional scaling (MDS) and the significance of clusters was tested using analysis of similarities (ANOSIM). Biological samples of D. capensis were collected monthly from an unexploited area from April 2008 to March 2009. Additional biological samples were collected from the subsistence fishers in an exploited area during May, June and December 2009. Standard biological laboratory techniques were employed for the lifehistory comparison between the exploited and unexploited area. A per-recruit analysis was conducted using the life-history parameters from both areas in order to assess the current status of the subsistence fishery and to investigate the potential short-falls of the per-recruit assessment approach. The morphometric comparison showed that there was not sufficient evidence for speciation between the southern Angolan and South African populations of D. capensis. There was, however, sufficient morphological evidence to suggest that these populations are separate stocks. This indicated that the existing reference points on which the management of the South African population is based are unsuitable for the Angolan population. Diplodus capensis in southern Angola is omnivorous, feeding predominantly on algae, barnacles and mussels. An ontogenetic shift from algae to barnacles and mussels was correlated with allometric growth patterns in their feeding apparatus. This species is a rudimentary hermaphrodite in southern Angola with peak spawning in June and July. The overall sex ratio (M: F) was 1: 4.7 in the unexploited area and 50% maturity was attained at 149.5mm FL and five years. Diplodus capensis in southern Angola exhibits very slow growth with the maximum age observed being 31 years (validated using mark recapture of chemically injected fish). Females [L(t) = 419.5(1-e⁻°·°⁴⁵⁽t⁻³·⁴ ⁾)] grew significantly faster (LRT, p < 0.05) than males [L(t) = 297.4(1-e⁻°·°⁷⁷⁽t⁻²·⁷⁾)], and females dominated the larger size classes and older age classes. In the exploited area, the length and age frequencies were severely truncated, the maximum observed age was greatly reduced (17 years) and the sex ratio was less female biased at 1: 2.2. Although there was no evidence for a physiological response to exploitation through alterations in growth or size/age at sexual maturity between the two areas, there was an increase in the proportion of small females in the exploited area, which may have been a compensatory response for the loss of large females. A combination of an underestimate of longevity, different estimates of the Von Bertalanffy growth parameters and overestimates of the natural mortality rate in the exploited population resulted in a 92% underestimate of the pristine spawner biomass-per-recruit (SBR) value. An assessment based on the actual pristine SBR estimate from the unexploited area revealed that the subsistence fishery had actually reduced D. capensis to 20% of its pristine SBR levels and highlighted the value of pre-exploitation life-history information for the application of per-recruit models. This study has shown that D. capensis in southern Angola displays life-history characteristics that render it susceptible to overexploitation, even at low levels of fishing pressure. The current lack of infrastructure and enforcement capacity in the fisheries department of Angola renders traditional linefish regulatory tools, such as size limits, bag limits and closed seasons, inappropriate. Therefore, suitably designed marine protected areas are recommended as the best management option for this species.
- Full Text:
- Date Issued: 2010
- Authors: Richardson, Timothy John
- Date: 2010
- Subjects: Diplodus -- Angola , Perciformes -- Angola , Sparidae -- Angola , Fish populations -- Angola , Fishes -- Classification -- Angola , Fisheries -- Angola
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5324 , http://hdl.handle.net/10962/d1005170 , Diplodus -- Angola , Perciformes -- Angola , Sparidae -- Angola , Fish populations -- Angola , Fishes -- Classification -- Angola , Fisheries -- Angola
- Description: The blacktail, Diplodus capensis, is an inshore sparid fish distributed from Mozambique to Angola. This species forms an important component of coastal fisheries within its distribution, one being the subsistence handline fishery in southern Angola. With this fishery being critically important to the livelihoods of local communities, a biological study and stock assessment was conducted to provide information for the management of this species in southern Angola. However, with molecular evidence suggesting that the Benguela current may have separated the southern African populations of many inshore fish species over two million years ago, a morphological, taxonomic analysis was considered necessary to first investigate whether there was evidence for allopatry in this species. A total of 46 morphometric measurements and 18 counts were carried out on specimens collected from various locations in southern Angola and South Africa. Results were analysed using multi-dimensional scaling (MDS) and the significance of clusters was tested using analysis of similarities (ANOSIM). Biological samples of D. capensis were collected monthly from an unexploited area from April 2008 to March 2009. Additional biological samples were collected from the subsistence fishers in an exploited area during May, June and December 2009. Standard biological laboratory techniques were employed for the lifehistory comparison between the exploited and unexploited area. A per-recruit analysis was conducted using the life-history parameters from both areas in order to assess the current status of the subsistence fishery and to investigate the potential short-falls of the per-recruit assessment approach. The morphometric comparison showed that there was not sufficient evidence for speciation between the southern Angolan and South African populations of D. capensis. There was, however, sufficient morphological evidence to suggest that these populations are separate stocks. This indicated that the existing reference points on which the management of the South African population is based are unsuitable for the Angolan population. Diplodus capensis in southern Angola is omnivorous, feeding predominantly on algae, barnacles and mussels. An ontogenetic shift from algae to barnacles and mussels was correlated with allometric growth patterns in their feeding apparatus. This species is a rudimentary hermaphrodite in southern Angola with peak spawning in June and July. The overall sex ratio (M: F) was 1: 4.7 in the unexploited area and 50% maturity was attained at 149.5mm FL and five years. Diplodus capensis in southern Angola exhibits very slow growth with the maximum age observed being 31 years (validated using mark recapture of chemically injected fish). Females [L(t) = 419.5(1-e⁻°·°⁴⁵⁽t⁻³·⁴ ⁾)] grew significantly faster (LRT, p < 0.05) than males [L(t) = 297.4(1-e⁻°·°⁷⁷⁽t⁻²·⁷⁾)], and females dominated the larger size classes and older age classes. In the exploited area, the length and age frequencies were severely truncated, the maximum observed age was greatly reduced (17 years) and the sex ratio was less female biased at 1: 2.2. Although there was no evidence for a physiological response to exploitation through alterations in growth or size/age at sexual maturity between the two areas, there was an increase in the proportion of small females in the exploited area, which may have been a compensatory response for the loss of large females. A combination of an underestimate of longevity, different estimates of the Von Bertalanffy growth parameters and overestimates of the natural mortality rate in the exploited population resulted in a 92% underestimate of the pristine spawner biomass-per-recruit (SBR) value. An assessment based on the actual pristine SBR estimate from the unexploited area revealed that the subsistence fishery had actually reduced D. capensis to 20% of its pristine SBR levels and highlighted the value of pre-exploitation life-history information for the application of per-recruit models. This study has shown that D. capensis in southern Angola displays life-history characteristics that render it susceptible to overexploitation, even at low levels of fishing pressure. The current lack of infrastructure and enforcement capacity in the fisheries department of Angola renders traditional linefish regulatory tools, such as size limits, bag limits and closed seasons, inappropriate. Therefore, suitably designed marine protected areas are recommended as the best management option for this species.
- Full Text:
- Date Issued: 2010
Intercohort cannibalism and parturition-associated behaviour of captive-bred swordtail, Xiphophorus helleri (Pisces: Poeciliidae)
- Jones, Clifford Louis Wilshire
- Authors: Jones, Clifford Louis Wilshire
- Date: 2003
- Subjects: Poeciliidae -- Behavior Xiphophorus helleri Fish culture
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:5351 , http://hdl.handle.net/10962/d1007812
- Description: Adult fish that belong to the family Poeciliidae cannibalise juveniles, both in the wild and under captive conditions, but this behaviour has only been partly investigated in the Poeciliidae in some of the commercially valuable species. The objective of the research is to develop an understanding of intercohort cannibalism and parturition-associated behaviour in captive-bred swordtail (Xiphophorus helleri), with applications to industry and future research of other poeciliids. Experiments investigating the effect of adult stocking density and sex ratio on the production of juveniles were used to determine if cannibalism occurs under culture conditions. The average rate of intercohort cannibalism ranged from (5.5 to 53.9%), and was positively density dependent and independent of sex ratio, indicating that males and females were probably equally cannibalistic. The highest number of juveniles (1725.7±141.4) produced per tank over 70 days was obtained from two males and eight females. To develop a better understanding of adult and juvenile behaviour during parturition, fish were observed under controlled laboratory conditions using video and behaviours such as attack (burst of speed by an adult in the direction of a juvenile), escape (avoidance of cannibalism after attack) and cannibalism (predation of a live juvenile by an adult), for example, were identified. Under laboratory conditions most young escaped in downward direction after attack (49%) and most utilised the refuge made that was made available. Furthermore, most attacks (62-65%) and cannibalism (57-84%) occurred at the bottom. Since the presence of refuge significantly increased the rate of juvenile survival under culture conditions, it was hypothesised that the rate of cannibalism could be reduced under farming conditions if juveniles were protected when they escaped downwards. This hypothesis was accepted as it was found that refuge at the bottom of the water column or the inclusion of a false-bottom reduced the rate of cannibalism by 49% and 72%, respectively. Similarly, the hypothesise that the rate of cannibalism could be reduced if juveniles where given protection when escaping sideways (32% of juveniles escaped sideways in the laboratory) was also accepted when tested under farm-scale conditions because a false-side reduced the rate of cannibalism by an average of 45%. Since males and females were equally responsible for cannibalising juveniles in the laboratory, it was hypothesised that the rate of cannibalism would decrease proportionately with the removal of males (Le. 20% of the cannibals) from the population; the removal of males under farming conditions resulted in a 19.5% reduction in the rate of cannibalism. Since older juveniles were better able to escape cannibalism than neonates and since adults habituate to stimuli that previously resulted in attack behaviour, it was hypothesised that the rate of cannibalism would remain unaffected by the length of time that juveniles were exposed to adults in the breeding tanks. This hypothesis was also accepted when tested under farm conditions. However, some hypotheses based on laboratory observations were not accepted. For example, a constant low light intensity did not appear to decrease the rate of cannibalism under farm conditions; also, the occurrence of dead and deformed juveniles went unnoticed in the laboratory, and under farm conditions, where adults did not have access to the bottom of the tank, 10% of the harvest consisted of dead and deformed juveniles. It is concluded that technologies, such as bottom-refuge or a false-side, that increase the size of the liveharvest and allow for the removal of potentially less viable offspring are recommended for the commercial production of poeciliids. The overall similarity of X. helleri behaviour between the laboratory experiments and the farm-scale trials suggests that the post-partum behaviour of X. helleri remains consistent under these different conditions; thus, behaviour under one set of conditions may be used to predict behaviour under other conditions. The application and significance of extrapolations to industry and future research of X. helleri and possibly other poeciliids were discussed and the most applicable laboratory observations with the highest extrapolation capacity were proposed. Furthermore, techniques were developed to aid industry and future researchers in making predictions relating to behaviour of X. helleri under different conditions based on laboratory observations. The results were used to develop a model indicating that selection pressures against cannibalism are not likely to exist at the rate of cannibalism observed here since the potential genetic gain through kin survival and inclusive fitness was shown to be greater than any potential genetiC loss experienced by a victim of cannibalism. The model was successfully tested under a range of social conditions. Other possible explanations for cannibalism in poeciliids, such as parental manipulation, nutritional advantages, opportunistic predation and the recovery of energy are discussed. It is suggested that the most likely proximate cause of cannibalism under captive conditions is opportunistic predation. The theory that cannibalism ensures that only viable genes of the victim are expressed, through inclusive fitness, is a possible ultimate cause of cannibalism, which may have been inherited from feral ancestors of captive-bred X. helleri.
- Full Text:
- Date Issued: 2003
- Authors: Jones, Clifford Louis Wilshire
- Date: 2003
- Subjects: Poeciliidae -- Behavior Xiphophorus helleri Fish culture
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:5351 , http://hdl.handle.net/10962/d1007812
- Description: Adult fish that belong to the family Poeciliidae cannibalise juveniles, both in the wild and under captive conditions, but this behaviour has only been partly investigated in the Poeciliidae in some of the commercially valuable species. The objective of the research is to develop an understanding of intercohort cannibalism and parturition-associated behaviour in captive-bred swordtail (Xiphophorus helleri), with applications to industry and future research of other poeciliids. Experiments investigating the effect of adult stocking density and sex ratio on the production of juveniles were used to determine if cannibalism occurs under culture conditions. The average rate of intercohort cannibalism ranged from (5.5 to 53.9%), and was positively density dependent and independent of sex ratio, indicating that males and females were probably equally cannibalistic. The highest number of juveniles (1725.7±141.4) produced per tank over 70 days was obtained from two males and eight females. To develop a better understanding of adult and juvenile behaviour during parturition, fish were observed under controlled laboratory conditions using video and behaviours such as attack (burst of speed by an adult in the direction of a juvenile), escape (avoidance of cannibalism after attack) and cannibalism (predation of a live juvenile by an adult), for example, were identified. Under laboratory conditions most young escaped in downward direction after attack (49%) and most utilised the refuge made that was made available. Furthermore, most attacks (62-65%) and cannibalism (57-84%) occurred at the bottom. Since the presence of refuge significantly increased the rate of juvenile survival under culture conditions, it was hypothesised that the rate of cannibalism could be reduced under farming conditions if juveniles were protected when they escaped downwards. This hypothesis was accepted as it was found that refuge at the bottom of the water column or the inclusion of a false-bottom reduced the rate of cannibalism by 49% and 72%, respectively. Similarly, the hypothesise that the rate of cannibalism could be reduced if juveniles where given protection when escaping sideways (32% of juveniles escaped sideways in the laboratory) was also accepted when tested under farm-scale conditions because a false-side reduced the rate of cannibalism by an average of 45%. Since males and females were equally responsible for cannibalising juveniles in the laboratory, it was hypothesised that the rate of cannibalism would decrease proportionately with the removal of males (Le. 20% of the cannibals) from the population; the removal of males under farming conditions resulted in a 19.5% reduction in the rate of cannibalism. Since older juveniles were better able to escape cannibalism than neonates and since adults habituate to stimuli that previously resulted in attack behaviour, it was hypothesised that the rate of cannibalism would remain unaffected by the length of time that juveniles were exposed to adults in the breeding tanks. This hypothesis was also accepted when tested under farm conditions. However, some hypotheses based on laboratory observations were not accepted. For example, a constant low light intensity did not appear to decrease the rate of cannibalism under farm conditions; also, the occurrence of dead and deformed juveniles went unnoticed in the laboratory, and under farm conditions, where adults did not have access to the bottom of the tank, 10% of the harvest consisted of dead and deformed juveniles. It is concluded that technologies, such as bottom-refuge or a false-side, that increase the size of the liveharvest and allow for the removal of potentially less viable offspring are recommended for the commercial production of poeciliids. The overall similarity of X. helleri behaviour between the laboratory experiments and the farm-scale trials suggests that the post-partum behaviour of X. helleri remains consistent under these different conditions; thus, behaviour under one set of conditions may be used to predict behaviour under other conditions. The application and significance of extrapolations to industry and future research of X. helleri and possibly other poeciliids were discussed and the most applicable laboratory observations with the highest extrapolation capacity were proposed. Furthermore, techniques were developed to aid industry and future researchers in making predictions relating to behaviour of X. helleri under different conditions based on laboratory observations. The results were used to develop a model indicating that selection pressures against cannibalism are not likely to exist at the rate of cannibalism observed here since the potential genetic gain through kin survival and inclusive fitness was shown to be greater than any potential genetiC loss experienced by a victim of cannibalism. The model was successfully tested under a range of social conditions. Other possible explanations for cannibalism in poeciliids, such as parental manipulation, nutritional advantages, opportunistic predation and the recovery of energy are discussed. It is suggested that the most likely proximate cause of cannibalism under captive conditions is opportunistic predation. The theory that cannibalism ensures that only viable genes of the victim are expressed, through inclusive fitness, is a possible ultimate cause of cannibalism, which may have been inherited from feral ancestors of captive-bred X. helleri.
- Full Text:
- Date Issued: 2003
The taxonomy, biogeography and biology of cow and frilled sharks (Chondrichthyes : Hexanchiformes)
- Authors: Ebert, David A
- Date: 1990
- Subjects: Chondrichthyes Hexanchiformes Sharks
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:5186 , http://hdl.handle.net/10962/d1001962
- Description: This study was undertaken to investigate the taxonomy, biogeography and biology of cow and frilled sharks (Chondrichthyes: Hexanchiformes). This taxon comprises two families, four genera and six extant species. The hexanchoids are a distinctive group of sharks characterized by six or seven paired gill openings, a single dorsal fin and an anal fin. Adult males of this group lack a siphon sac, but have in its place a clasper sac. This structure, which develops along the claspers, is unique to the Hexanchiformes. Hexanchoid sharks are widely distributed in area and depth. This group ranges from coastal bays and harbors along the open coast out across the continental shelf and down along the slopes to considerable depths. They occur from the equatorial zone to sub-polar regions. However, little is known about the ecology and life history of these sharks. Intraspecific variation of meristic counts were generally low for the Hexanchidae, but high for the Chlamydoselachidae, indicating that subpopulations, subspecies or even additional, new species exist within this family. Based on the indicators used in this study, maturity in male frilled sharks was attained at 916 mm TL, perlon sharks between 700 and 800 mm TL, sixgill sharks approximately 3140 mm TL, bigeyed sixgill sharks at about 1250 mm TL and sevengill sharks at approximately 1550 mm TL. Male reproductive success did not appear to be seasonal since males were found to contain viable sperm all year round. Female perlon sharks begin maturing between 950 mm and 1100 mm TL. Gravid females and newborns were absent from the other size classes and it is suspected that they aggregate in different locations to those of adult males and non-breeding females. Adult females are known at 4210 mm TL and immature at 3500 mm TL, However, a more accurate estimate of the size at maturity is wanting. Newborn sixgills were caught off southern Namibia during mid to late summer over three successive seasons. The occurrence of gravid females carrying term embryos during spring months and newborns during the summer months suggests a late spring or summer pupping period. Sixgill and sevengill sharks give birth in areas of high primary productivity. Energetically, this is advantageous for the newborns to be placed in an area with an abundant food source. The rapid growth rates of sixgill and sevengill sharks over the first year would enhance their survivorship since neither species has many predators. The number of female sevengills entering the breeding population is regulated to ensure that some portion of the population is reproductively active at any one time. The "staggering" of females which enter into the breeding population in any given year indicates a two year reproductive cycle. Fecundity estimates for 19 specimens with a largest egg diameter of at least 40 mm indicates a litter size of 67 to 104. The recapture of an adult female sevengill in approximately the same location in which it was tagged suggests that the same individual sharks may return to the same breeding grounds. As with any predators, sharks tend to exploit advantages over their prey. The hexanchoids, especially the sevengill, have evolved complex foraging strategies including social facilitation whereby they actively hunt in packs for large prey species. Sharks of the order Hexanchiformes, although lacking the diversity of the major shark orders, nonetheless play an integral role in the marine environment. The group's success can be attributed to their apical trophic position. In most habitats in which they occur, hexanchoids have no comparable competitors since equivalent sized sympatric squaloids and carcharhinoids feed at a lower trophic level.
- Full Text:
- Date Issued: 1990
- Authors: Ebert, David A
- Date: 1990
- Subjects: Chondrichthyes Hexanchiformes Sharks
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:5186 , http://hdl.handle.net/10962/d1001962
- Description: This study was undertaken to investigate the taxonomy, biogeography and biology of cow and frilled sharks (Chondrichthyes: Hexanchiformes). This taxon comprises two families, four genera and six extant species. The hexanchoids are a distinctive group of sharks characterized by six or seven paired gill openings, a single dorsal fin and an anal fin. Adult males of this group lack a siphon sac, but have in its place a clasper sac. This structure, which develops along the claspers, is unique to the Hexanchiformes. Hexanchoid sharks are widely distributed in area and depth. This group ranges from coastal bays and harbors along the open coast out across the continental shelf and down along the slopes to considerable depths. They occur from the equatorial zone to sub-polar regions. However, little is known about the ecology and life history of these sharks. Intraspecific variation of meristic counts were generally low for the Hexanchidae, but high for the Chlamydoselachidae, indicating that subpopulations, subspecies or even additional, new species exist within this family. Based on the indicators used in this study, maturity in male frilled sharks was attained at 916 mm TL, perlon sharks between 700 and 800 mm TL, sixgill sharks approximately 3140 mm TL, bigeyed sixgill sharks at about 1250 mm TL and sevengill sharks at approximately 1550 mm TL. Male reproductive success did not appear to be seasonal since males were found to contain viable sperm all year round. Female perlon sharks begin maturing between 950 mm and 1100 mm TL. Gravid females and newborns were absent from the other size classes and it is suspected that they aggregate in different locations to those of adult males and non-breeding females. Adult females are known at 4210 mm TL and immature at 3500 mm TL, However, a more accurate estimate of the size at maturity is wanting. Newborn sixgills were caught off southern Namibia during mid to late summer over three successive seasons. The occurrence of gravid females carrying term embryos during spring months and newborns during the summer months suggests a late spring or summer pupping period. Sixgill and sevengill sharks give birth in areas of high primary productivity. Energetically, this is advantageous for the newborns to be placed in an area with an abundant food source. The rapid growth rates of sixgill and sevengill sharks over the first year would enhance their survivorship since neither species has many predators. The number of female sevengills entering the breeding population is regulated to ensure that some portion of the population is reproductively active at any one time. The "staggering" of females which enter into the breeding population in any given year indicates a two year reproductive cycle. Fecundity estimates for 19 specimens with a largest egg diameter of at least 40 mm indicates a litter size of 67 to 104. The recapture of an adult female sevengill in approximately the same location in which it was tagged suggests that the same individual sharks may return to the same breeding grounds. As with any predators, sharks tend to exploit advantages over their prey. The hexanchoids, especially the sevengill, have evolved complex foraging strategies including social facilitation whereby they actively hunt in packs for large prey species. Sharks of the order Hexanchiformes, although lacking the diversity of the major shark orders, nonetheless play an integral role in the marine environment. The group's success can be attributed to their apical trophic position. In most habitats in which they occur, hexanchoids have no comparable competitors since equivalent sized sympatric squaloids and carcharhinoids feed at a lower trophic level.
- Full Text:
- Date Issued: 1990
A contribution to the ecology and systematics of the genus Petrotilapia (Pisces : Cichlidae) in Lake Malawi
- Authors: Marsh, Alan Clive
- Date: 2013-03-20
- Subjects: Cichlids -- Nyasa, Lake , Petrotilapia
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5355 , http://hdl.handle.net/10962/d1009513 , Cichlids -- Nyasa, Lake , Petrotilapia
- Description: The nominal species Petrotilapia tridentiger Trewavas, a rock-frequenting fish from Lake Malawi, occurs in three distinct male and female colour forms at Monkey Bay. Field observations on courtship and aggression indicate that the three colour forms are distinct species. The taxonomy of the three species of Petrotilapia that occur at Monkey Bay is revised. R. tridentiger is redescribed and two new species, P. genalutea and P. nigra, are described. The three species are very similar morphologically and are considered to be sibling species. The only morphological character which reliably separates the three sibling species is live coloration: Live coloration is considered to be an important component of the specific mate recognition systems in Petrotilapia species. The coloration of a further fourteen forms of Petrotilapia is described and it is suggested that these forms are valid species. Space resource partitioning plays an important role in facilitating the coexistence of Petrotilapia sibling species. Space is partially partitioned in terms of depth range. In shallow water, where all three species are sympatric, there are differences in the feeding sites used by the various Petrotilapia forms. Changes in niche breadth and overlap, which are associated with changes in the abundance of epilithic algae, indicate that competition for feeding space occurs between the three Petrotilapia species. The Petrotilapia species partition their resources according to a social dominance hierarchy. Dominant forms, such as territorial males, R. tridentiger females and schooling R. genalutea females, have access to rich food supplies which occur within the territories of certain highly aggressive Pseudotronheus species. are facultative and opportunistic .feeders. Petrotilapia species Speciation in allopatry is considered to be the mechanism which adequately explains the current diversity of the genus Petrotilapia. The importance of an integrative approach to future systematic and ecological research on Lake Malawi cichlids is stressed. , KMBT_363 , Adobe Acrobat 9.53 Paper Capture Plug-in
- Full Text:
- Authors: Marsh, Alan Clive
- Date: 2013-03-20
- Subjects: Cichlids -- Nyasa, Lake , Petrotilapia
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5355 , http://hdl.handle.net/10962/d1009513 , Cichlids -- Nyasa, Lake , Petrotilapia
- Description: The nominal species Petrotilapia tridentiger Trewavas, a rock-frequenting fish from Lake Malawi, occurs in three distinct male and female colour forms at Monkey Bay. Field observations on courtship and aggression indicate that the three colour forms are distinct species. The taxonomy of the three species of Petrotilapia that occur at Monkey Bay is revised. R. tridentiger is redescribed and two new species, P. genalutea and P. nigra, are described. The three species are very similar morphologically and are considered to be sibling species. The only morphological character which reliably separates the three sibling species is live coloration: Live coloration is considered to be an important component of the specific mate recognition systems in Petrotilapia species. The coloration of a further fourteen forms of Petrotilapia is described and it is suggested that these forms are valid species. Space resource partitioning plays an important role in facilitating the coexistence of Petrotilapia sibling species. Space is partially partitioned in terms of depth range. In shallow water, where all three species are sympatric, there are differences in the feeding sites used by the various Petrotilapia forms. Changes in niche breadth and overlap, which are associated with changes in the abundance of epilithic algae, indicate that competition for feeding space occurs between the three Petrotilapia species. The Petrotilapia species partition their resources according to a social dominance hierarchy. Dominant forms, such as territorial males, R. tridentiger females and schooling R. genalutea females, have access to rich food supplies which occur within the territories of certain highly aggressive Pseudotronheus species. are facultative and opportunistic .feeders. Petrotilapia species Speciation in allopatry is considered to be the mechanism which adequately explains the current diversity of the genus Petrotilapia. The importance of an integrative approach to future systematic and ecological research on Lake Malawi cichlids is stressed. , KMBT_363 , Adobe Acrobat 9.53 Paper Capture Plug-in
- Full Text:
The trophic and spatial ecology of a sympatric dasyatid community at a remote Atoll, Seychelles
- Authors: Elston, Chantel
- Date: 2019
- Subjects: Dasyatidae -- Seychelles -- Ecology , Rays (Fishes) -- Seychelles -- Ecology , Ecology -- Seychelles , Dasyatidae -- Seychelles -- Conservation , Pastinachus sephen , Urogymnus granulatus , Urogymnus asperrimus
- Language: English
- Type: text , Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10962/95756 , vital:31196 , DOI https://doi.org/10.21504/10962/95756
- Description: Batoid populations are declining globally but the paucity of information makes management or conservation efforts difficult. Additionally, batoids are mesopredators and are hypothesised to play important ecological roles, but a comprehensive understanding of these roles is also limited. Therefore, information on batoid habitat use, foraging ecology, and resource partitioning is needed. St. Joseph Atoll is a relatively pristine ecosystem that hosts a sympatric dasyatid community (Pastinachus sephen, Urogymnus granulatus, and U. asperrimus). Passive acoustic telemetry identified high levels of long-term site affinity by both juvenile and adult dasyatids to St. Joseph Atoll. Dispersal from the atoll by larger juveniles was also evident. Juveniles displayed restricted horizontal movements in the atoll, but the extent of these movements differed seasonally. Stomach content and stable isotope analyses identified inter-specific prey partitioning (P. sephen juveniles were mollusc specialists and U. granulatus juveniles were crustacean specialists) and intra-specific prey partitioning. Juveniles were reliant upon a seagrass-based food web, whereas adults were reliant on phytoplankton-based food web. Adults fed at higher trophic levels compared to juveniles (mean of 4.6 and 3.4 respectively). Juvenile dasyatids preferentially selected the shallow reef at habitat of the atoll, where there was no evidence for inter-specific habitat partitioning (individuals co-occurred randomly with con-and hetero-specifics). Conversely, resident adults were more reliant on the deeper lagoon. Juveniles selected the reef at habitat likely because it provided refuge from predation and foraging opportunities. However, juveniles were also detected in the lagoon habitat and this appeared to be necessitated by physical factors as they were detected more frequently in the lagoon at low tides and when temperatures on the reef fats became too warm or too cold. All results together suggest that St. Joseph Atoll is a nursery area for these dasyatids. Juveniles may be limited by resources as prey was partitioned between species. However, top-down control by larger sharks was likely a significant influence on habitat selection, as was the physical effects of tide and temperature. Finally, St. Joseph Atoll is suitable for the designation of a Marine Protected Area, which would likely confer high conservation benefits to this dasyatid community.
- Full Text:
- Date Issued: 2019
- Authors: Elston, Chantel
- Date: 2019
- Subjects: Dasyatidae -- Seychelles -- Ecology , Rays (Fishes) -- Seychelles -- Ecology , Ecology -- Seychelles , Dasyatidae -- Seychelles -- Conservation , Pastinachus sephen , Urogymnus granulatus , Urogymnus asperrimus
- Language: English
- Type: text , Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10962/95756 , vital:31196 , DOI https://doi.org/10.21504/10962/95756
- Description: Batoid populations are declining globally but the paucity of information makes management or conservation efforts difficult. Additionally, batoids are mesopredators and are hypothesised to play important ecological roles, but a comprehensive understanding of these roles is also limited. Therefore, information on batoid habitat use, foraging ecology, and resource partitioning is needed. St. Joseph Atoll is a relatively pristine ecosystem that hosts a sympatric dasyatid community (Pastinachus sephen, Urogymnus granulatus, and U. asperrimus). Passive acoustic telemetry identified high levels of long-term site affinity by both juvenile and adult dasyatids to St. Joseph Atoll. Dispersal from the atoll by larger juveniles was also evident. Juveniles displayed restricted horizontal movements in the atoll, but the extent of these movements differed seasonally. Stomach content and stable isotope analyses identified inter-specific prey partitioning (P. sephen juveniles were mollusc specialists and U. granulatus juveniles were crustacean specialists) and intra-specific prey partitioning. Juveniles were reliant upon a seagrass-based food web, whereas adults were reliant on phytoplankton-based food web. Adults fed at higher trophic levels compared to juveniles (mean of 4.6 and 3.4 respectively). Juvenile dasyatids preferentially selected the shallow reef at habitat of the atoll, where there was no evidence for inter-specific habitat partitioning (individuals co-occurred randomly with con-and hetero-specifics). Conversely, resident adults were more reliant on the deeper lagoon. Juveniles selected the reef at habitat likely because it provided refuge from predation and foraging opportunities. However, juveniles were also detected in the lagoon habitat and this appeared to be necessitated by physical factors as they were detected more frequently in the lagoon at low tides and when temperatures on the reef fats became too warm or too cold. All results together suggest that St. Joseph Atoll is a nursery area for these dasyatids. Juveniles may be limited by resources as prey was partitioned between species. However, top-down control by larger sharks was likely a significant influence on habitat selection, as was the physical effects of tide and temperature. Finally, St. Joseph Atoll is suitable for the designation of a Marine Protected Area, which would likely confer high conservation benefits to this dasyatid community.
- Full Text:
- Date Issued: 2019
Reef fish associations with benthic habitats at a remote protected coral reef ecosystem in the Western Indian Ocean-Aldabra Atoll, Seychelles
- Authors: Haupt, Philip
- Date: 2020
- Subjects: Coral reef ecology -- Aldabra Islands (Seychelles) , Reef fishes -- Aldabra Islands (Seychelles) , Benthic animals -- Aldabra Islands (Seychelles)
- Language: English
- Type: text , Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10962/141629 , vital:37991
- Description: The aim of the thesis is to develop an understanding of the associations between reef fish and benthic habitats and assess the modifying effects of environmental processes on these relationships at Aldabra, a pristine atoll in the Western Indian Ocean (WIO). Conducting research in pristine, or reference coral reef ecosystem, removes the impact of direct anthropogenic disturbances and provides essential information on natural ecosystem structure and functioning. Three primary hypotheses were tested: 1) Environmental drivers such as depth and exposure to wave energy determine the spatial distribution of benthic habitats; 2) The reef fish assemblage structure is explained by habitat at multiple scales and modified by the effects of environmental drivers such as depth, wave energy and cyclical temporal drivers such as time and tides; 3) The reef fish assemblage at Aldabra represents a pristine reef fish assemblage, comprising high levels of herbivores and predators. The research focussed on the benthic habitat on the seaward reefs between the shoreline and 50 m depth. The first objective was to characterise the benthic habitats on Aldabra Atoll’s seaward reefs and map their spatial distributions using remotely sensed imagery and ground truthing data. The second was to assess the influence of depth and exposure to wave energy on the distribution of benthic habitats. The third was to identify the most suitable standardised method to survey the reef fish assemblage structure on Aldabra’s, and fourth to determine the effect of tide and time of day on the reef fish assemblage. The fifth objective was to establish the association between reef fish assemblage structure and benthic habitats and to test how species-size influenced the scale of habitat at which the associations were most apparent. Four categories of geomorphic reef zones (reef flats (19.2 km2), top of the forereef slope (7.8 km2), deep forereef slope (11.6 km2), and reef platform (14.3 km2)) were manually delineated following the visual outlines of reef features from satellite imagery. The six broad-scale and twelve fine-scale benthic habitats were mapped using a supervised maximum likelihood classification and the spatial coverage of each determined. The broad-scale habitats were 1) Epilithic algal matrix, 2) Hard and soft (coral, 3) Rubble, 4) Macroalgae, 5) Seagrass and 6) Sand. Similarly, twelve fine-scale benthic habitats were characterised and mapped, for example, Hard coral (19 %) including massive and submassive forms with Millepora and Rhytisma. The broad-scale benthic habitat map had an overall producer accuracy of 54 % and fine-scale habitat map 29 %, which was consistent with studies using similar habitat classification methods. The prevailing wave energy, depth and the directional orientation of coral reefs (aspect) significantly influenced the probability of occurrence of each of the broad-scale benthic habitats, and there was a shift in peak probability of occurrence of all habitat categories to a greater depth with an increase in wave energy. The strong relationship of benthic habitats with depth and wave energy suggests that the distributions of benthic habitats are likely to change with sea-level rise and increased intensity and frequency of storms in future. Overall, 338 fish species from 51 families, including 14 species of elasmobranch were recorded using Baited Remote Underwater Video systems (BRUVs) and unbaited Remote Underwater Video systems (RUVS) from 231 samples. Fish were significantly more abundant when observed using BRUVs (119 ± 7) relative to RUVs (92 ± 7), and the assemblage structures were significantly different between the two sampling methods. Abundance and species richness of generalist carnivores and piscivores were significantly greater in BRUVs, while RUVs recorded significantly greater numbers of herbivores and more species of herbivore and corallivore. The results suggest that BRUVs are better suited when studying predatory fish which may not be detected without bait. However, when surveying a taxonomically and functionally diverse assemblage of fishes at a pristine reef, RUVs may provide a more accurate estimate of natural reef fish assemblage structure. Reef fish assemblages observed using RUVs were significantly different between morning-high-tide, midday-low-tide and evening-high-tide for all trophic groups. However, the reef fish assemblage structure observed using BRUVs was insensitive to change in tide and time of day, which may be explained by the attraction effect of bait dampening the effect of tide and time of day. While RUVs appear better to detect more subtle variations in fish assemblage structure, care needs to be taken when designing research programmes that use RUVs, as the sampling design should account for tide and time of day to avoid misinterpreting the cyclical variation, which may confound results. Reef fish assemblages were significantly different among habitats within geomorphic reef zones, broad-scale and fine-scale habitats. Species turnover rates were significantly different for all Actinopterygii size-class categories between the three scales of habitat. No marked differences in species turnover rates among habitats were detected for the majority of Elasmobranch size-class categories. The strong habitat dependency over various spatial scales indicates that effective conservation of Actinopterygii fish at Aldabra, and elsewhere in similar ecosystems requires protection of representative sets of benthic habitats. However, Elasmobranch conservation requires sufficiently large areas as these species utilise multiple habitats, over multiple scales, which are likely to exceed the confines of Aldabra’s reef.
- Full Text:
- Date Issued: 2020
- Authors: Haupt, Philip
- Date: 2020
- Subjects: Coral reef ecology -- Aldabra Islands (Seychelles) , Reef fishes -- Aldabra Islands (Seychelles) , Benthic animals -- Aldabra Islands (Seychelles)
- Language: English
- Type: text , Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10962/141629 , vital:37991
- Description: The aim of the thesis is to develop an understanding of the associations between reef fish and benthic habitats and assess the modifying effects of environmental processes on these relationships at Aldabra, a pristine atoll in the Western Indian Ocean (WIO). Conducting research in pristine, or reference coral reef ecosystem, removes the impact of direct anthropogenic disturbances and provides essential information on natural ecosystem structure and functioning. Three primary hypotheses were tested: 1) Environmental drivers such as depth and exposure to wave energy determine the spatial distribution of benthic habitats; 2) The reef fish assemblage structure is explained by habitat at multiple scales and modified by the effects of environmental drivers such as depth, wave energy and cyclical temporal drivers such as time and tides; 3) The reef fish assemblage at Aldabra represents a pristine reef fish assemblage, comprising high levels of herbivores and predators. The research focussed on the benthic habitat on the seaward reefs between the shoreline and 50 m depth. The first objective was to characterise the benthic habitats on Aldabra Atoll’s seaward reefs and map their spatial distributions using remotely sensed imagery and ground truthing data. The second was to assess the influence of depth and exposure to wave energy on the distribution of benthic habitats. The third was to identify the most suitable standardised method to survey the reef fish assemblage structure on Aldabra’s, and fourth to determine the effect of tide and time of day on the reef fish assemblage. The fifth objective was to establish the association between reef fish assemblage structure and benthic habitats and to test how species-size influenced the scale of habitat at which the associations were most apparent. Four categories of geomorphic reef zones (reef flats (19.2 km2), top of the forereef slope (7.8 km2), deep forereef slope (11.6 km2), and reef platform (14.3 km2)) were manually delineated following the visual outlines of reef features from satellite imagery. The six broad-scale and twelve fine-scale benthic habitats were mapped using a supervised maximum likelihood classification and the spatial coverage of each determined. The broad-scale habitats were 1) Epilithic algal matrix, 2) Hard and soft (coral, 3) Rubble, 4) Macroalgae, 5) Seagrass and 6) Sand. Similarly, twelve fine-scale benthic habitats were characterised and mapped, for example, Hard coral (19 %) including massive and submassive forms with Millepora and Rhytisma. The broad-scale benthic habitat map had an overall producer accuracy of 54 % and fine-scale habitat map 29 %, which was consistent with studies using similar habitat classification methods. The prevailing wave energy, depth and the directional orientation of coral reefs (aspect) significantly influenced the probability of occurrence of each of the broad-scale benthic habitats, and there was a shift in peak probability of occurrence of all habitat categories to a greater depth with an increase in wave energy. The strong relationship of benthic habitats with depth and wave energy suggests that the distributions of benthic habitats are likely to change with sea-level rise and increased intensity and frequency of storms in future. Overall, 338 fish species from 51 families, including 14 species of elasmobranch were recorded using Baited Remote Underwater Video systems (BRUVs) and unbaited Remote Underwater Video systems (RUVS) from 231 samples. Fish were significantly more abundant when observed using BRUVs (119 ± 7) relative to RUVs (92 ± 7), and the assemblage structures were significantly different between the two sampling methods. Abundance and species richness of generalist carnivores and piscivores were significantly greater in BRUVs, while RUVs recorded significantly greater numbers of herbivores and more species of herbivore and corallivore. The results suggest that BRUVs are better suited when studying predatory fish which may not be detected without bait. However, when surveying a taxonomically and functionally diverse assemblage of fishes at a pristine reef, RUVs may provide a more accurate estimate of natural reef fish assemblage structure. Reef fish assemblages observed using RUVs were significantly different between morning-high-tide, midday-low-tide and evening-high-tide for all trophic groups. However, the reef fish assemblage structure observed using BRUVs was insensitive to change in tide and time of day, which may be explained by the attraction effect of bait dampening the effect of tide and time of day. While RUVs appear better to detect more subtle variations in fish assemblage structure, care needs to be taken when designing research programmes that use RUVs, as the sampling design should account for tide and time of day to avoid misinterpreting the cyclical variation, which may confound results. Reef fish assemblages were significantly different among habitats within geomorphic reef zones, broad-scale and fine-scale habitats. Species turnover rates were significantly different for all Actinopterygii size-class categories between the three scales of habitat. No marked differences in species turnover rates among habitats were detected for the majority of Elasmobranch size-class categories. The strong habitat dependency over various spatial scales indicates that effective conservation of Actinopterygii fish at Aldabra, and elsewhere in similar ecosystems requires protection of representative sets of benthic habitats. However, Elasmobranch conservation requires sufficiently large areas as these species utilise multiple habitats, over multiple scales, which are likely to exceed the confines of Aldabra’s reef.
- Full Text:
- Date Issued: 2020
Modelling the spatial and genetic response of the endemic sparid: Polysteganus praeorbitalis (Pisces: Sparidae) to climate change in the Agulhas Current system
- Authors: Isemonger, Devin Neil
- Date: 2014
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/54509 , vital:26576
- Description: The Scotsman Seabream, Polysteganus praeorbitalis, is one of several large, slow-growing members of the Sparidae family of fishes endemic to the Agulhas Current system in the Western Indian Ocean (WIO). Relatively little research has been conducted on this species despite its importance to both recreational and commercial line fisheries in South Africa and the drastic decline in catch per unit effort (CPUE) that has been recorded since the 1940s. Changing sea temperatures as a result of global climate change are further expected to affect the distribution and abundance of many fish species based on their thermal tolerances, life histories and population structures. The ability of these species to shift their distribution and adapt to new environments and thermal conditions will depend to some degree on the levels of genetic variation and gene flow, within and between populations. A combined approach using species distribution modelling and genetic analyses may prove to be a useful tool in investigating the potential effects of climate change on the distribution and genetic diversity of species. An ensemble species distribution model (SDM) based on 205 occurrence records and 30 years of Reynolds Optimum Interpolated (OI) sea surface temperature data was constructed to predict the distributional response of P. praeorbitalis to climate change in the Agulhas Current system. The ensemble SDM displayed a true skill statistic (TSS) of 0.975 and an area under the receiver operating curve (ROC) of 0.999, indicating good model fit. Autumn and winter minimum temperatures, as well as bathymetry, were the most important predictor variables in the majority of models, indicating that these variables may directly constrain the distribution of P. praeorbitalis. In particular, the southern range edge of this species appeared to be constrained by autumn and winter minima, with high model agreement on this range edge. Conversely, the northern range limit showed poor model agreement leading to a gradual reduction in occurrence. This indicates that this range edge may be constrained by other factors not included in the models such as species interactions. The ensemble SDM projected the current range of P. praeorbitalis to be 1500 km², smaller than the published range for this species. The model underestimated the northern range edge of this species by approximately 5° latitude when binary transformed. This is probably due to the rarity of this species in the landings of the Mozambican linefishery, which was assumed to be an indication of low abundance of P. praeorbitalis in these waters. The absence of a specimen to verify the published northern range edge of this species indicates that the northern range edge produced by this model is likely to be closer to the actual range limit of the species. A range contraction of 30% occurring at both the northern and southern edge of P. praeorbitalis’ range and range fragmentation occurring, towards its northern range edge by 2030, was predicted. These changes are modelled to be the results of cooling related to the intensification of the Port Alfred upwelling cell and of warming predicted north of the Natal Bight and in southern Mozambique. Genetic analyses of the nuclear DNA (nDNA) S7 intron 1 and mitochondrial DNA (mtDNA) control region genes were carried out using 118 tissue samples of P. praeorbitalis collected at four main localities: the Eastern Cape, Transkei, southern KwaZulu-Natal and northern KwaZulu-Natal. Analyses of genetic diversity levels revealed relatively low diversity in the mtDNA dataset (Hd = 0.488; π = 0.004) and moderate levels of diversity in the nDNA dataset (Ad = 0.922; π = 0.005). The low levels of diversity observed in the mtDNA dataset might be explained by a number of factors, including high variation in spawning success, the negative effects of over-harvesting, or a recent population bottleneck. The last explanation is supported by characteristic star-shaped haplotype networks and unimodal mismatch distributions displayed by both datasets. These results, in conjunction with a significant (p = 0.005) negative Tajimas D value (-2.029) in the mtDNA dataset and significant (p = 0.0005) negative Fu’s F statistic in both the nDNA (F = -26.5) and mtDNA (F = -11.9) datasets, provide strong evidence for a recent population expansion after a bottleneck event in this species. Spatially, mtDNA diversity was highest in the Eastern Cape and lowest in the middle localities, while nDNA diversity showed the opposite pattern. These results may be indicative of differences in the sex ratio between localities, possibly as a result of the protogynous hermaphroditism that has been postulated for this species. Although pairwise comparisons and exact tests of population differentiation revealed no significant geneticdifferentiation between populations in the mtDNA dataset, there was some evidence of low levels of differentiation in the nDNA dataset. This occurred for comparisons between the Eastern Cape and Transkei (Fst = 0.039; p <0.05), and the northern KwaZulu-Natal (Fst = 0.045; p < 0.05).. This might be the result of one or a combination of factors including the effects of the Port Alfred upwelling cell on dispersal and gene flow, or the possibility of more than one spawning ground for this species promoting sub-structuring. A SAMOVA analyses run on the nDNA dataset maximised variance by grouping the Eastern Cape and southern KwaZulu-Natal together and Transkei and northern KwaZulu-Natal together in two groups. This revealed no evidence of spatial structure (p = 0.36), with only 3.30% of variation explained by this grouping. The removal of individuals below the estimated length at 50% maturity in the nDNA dataset, in order to test for temporal structure, resulted in stronger evidence of differentiation between the Eastern Cape and all other localities: Transkei (Fst = 0.081; p< 0.05), southern KwaZulu-Natal (Fst = 0.031; p<0.05), and northern KwaZulu-Natal (Fst = 0.078; p< 0.05). This indicates that some temporal genetic structure may exist between age classes within this species. The differentiation observed between the Eastern Cape and other localities, coupled with the high percentage of private haplotypes in the mtDNA dataset in this locality, indicates that this area is where P. praeorbitalis is most vulnerable to the potential negative effects of climate change on its genetic diversity. However, the vast majority of this species genetic diversity appears to reside towards the centre of its range where it is most abundant and the lack of strong genetic structure indicates high levels of gene flow. In conclusion, while P. praeorbitalis is vulnerable to range loss as a result of climate change, its genetic diversity is unlikely to be greatly affected.
- Full Text:
- Date Issued: 2014
- Authors: Isemonger, Devin Neil
- Date: 2014
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/54509 , vital:26576
- Description: The Scotsman Seabream, Polysteganus praeorbitalis, is one of several large, slow-growing members of the Sparidae family of fishes endemic to the Agulhas Current system in the Western Indian Ocean (WIO). Relatively little research has been conducted on this species despite its importance to both recreational and commercial line fisheries in South Africa and the drastic decline in catch per unit effort (CPUE) that has been recorded since the 1940s. Changing sea temperatures as a result of global climate change are further expected to affect the distribution and abundance of many fish species based on their thermal tolerances, life histories and population structures. The ability of these species to shift their distribution and adapt to new environments and thermal conditions will depend to some degree on the levels of genetic variation and gene flow, within and between populations. A combined approach using species distribution modelling and genetic analyses may prove to be a useful tool in investigating the potential effects of climate change on the distribution and genetic diversity of species. An ensemble species distribution model (SDM) based on 205 occurrence records and 30 years of Reynolds Optimum Interpolated (OI) sea surface temperature data was constructed to predict the distributional response of P. praeorbitalis to climate change in the Agulhas Current system. The ensemble SDM displayed a true skill statistic (TSS) of 0.975 and an area under the receiver operating curve (ROC) of 0.999, indicating good model fit. Autumn and winter minimum temperatures, as well as bathymetry, were the most important predictor variables in the majority of models, indicating that these variables may directly constrain the distribution of P. praeorbitalis. In particular, the southern range edge of this species appeared to be constrained by autumn and winter minima, with high model agreement on this range edge. Conversely, the northern range limit showed poor model agreement leading to a gradual reduction in occurrence. This indicates that this range edge may be constrained by other factors not included in the models such as species interactions. The ensemble SDM projected the current range of P. praeorbitalis to be 1500 km², smaller than the published range for this species. The model underestimated the northern range edge of this species by approximately 5° latitude when binary transformed. This is probably due to the rarity of this species in the landings of the Mozambican linefishery, which was assumed to be an indication of low abundance of P. praeorbitalis in these waters. The absence of a specimen to verify the published northern range edge of this species indicates that the northern range edge produced by this model is likely to be closer to the actual range limit of the species. A range contraction of 30% occurring at both the northern and southern edge of P. praeorbitalis’ range and range fragmentation occurring, towards its northern range edge by 2030, was predicted. These changes are modelled to be the results of cooling related to the intensification of the Port Alfred upwelling cell and of warming predicted north of the Natal Bight and in southern Mozambique. Genetic analyses of the nuclear DNA (nDNA) S7 intron 1 and mitochondrial DNA (mtDNA) control region genes were carried out using 118 tissue samples of P. praeorbitalis collected at four main localities: the Eastern Cape, Transkei, southern KwaZulu-Natal and northern KwaZulu-Natal. Analyses of genetic diversity levels revealed relatively low diversity in the mtDNA dataset (Hd = 0.488; π = 0.004) and moderate levels of diversity in the nDNA dataset (Ad = 0.922; π = 0.005). The low levels of diversity observed in the mtDNA dataset might be explained by a number of factors, including high variation in spawning success, the negative effects of over-harvesting, or a recent population bottleneck. The last explanation is supported by characteristic star-shaped haplotype networks and unimodal mismatch distributions displayed by both datasets. These results, in conjunction with a significant (p = 0.005) negative Tajimas D value (-2.029) in the mtDNA dataset and significant (p = 0.0005) negative Fu’s F statistic in both the nDNA (F = -26.5) and mtDNA (F = -11.9) datasets, provide strong evidence for a recent population expansion after a bottleneck event in this species. Spatially, mtDNA diversity was highest in the Eastern Cape and lowest in the middle localities, while nDNA diversity showed the opposite pattern. These results may be indicative of differences in the sex ratio between localities, possibly as a result of the protogynous hermaphroditism that has been postulated for this species. Although pairwise comparisons and exact tests of population differentiation revealed no significant geneticdifferentiation between populations in the mtDNA dataset, there was some evidence of low levels of differentiation in the nDNA dataset. This occurred for comparisons between the Eastern Cape and Transkei (Fst = 0.039; p <0.05), and the northern KwaZulu-Natal (Fst = 0.045; p < 0.05).. This might be the result of one or a combination of factors including the effects of the Port Alfred upwelling cell on dispersal and gene flow, or the possibility of more than one spawning ground for this species promoting sub-structuring. A SAMOVA analyses run on the nDNA dataset maximised variance by grouping the Eastern Cape and southern KwaZulu-Natal together and Transkei and northern KwaZulu-Natal together in two groups. This revealed no evidence of spatial structure (p = 0.36), with only 3.30% of variation explained by this grouping. The removal of individuals below the estimated length at 50% maturity in the nDNA dataset, in order to test for temporal structure, resulted in stronger evidence of differentiation between the Eastern Cape and all other localities: Transkei (Fst = 0.081; p< 0.05), southern KwaZulu-Natal (Fst = 0.031; p<0.05), and northern KwaZulu-Natal (Fst = 0.078; p< 0.05). This indicates that some temporal genetic structure may exist between age classes within this species. The differentiation observed between the Eastern Cape and other localities, coupled with the high percentage of private haplotypes in the mtDNA dataset in this locality, indicates that this area is where P. praeorbitalis is most vulnerable to the potential negative effects of climate change on its genetic diversity. However, the vast majority of this species genetic diversity appears to reside towards the centre of its range where it is most abundant and the lack of strong genetic structure indicates high levels of gene flow. In conclusion, while P. praeorbitalis is vulnerable to range loss as a result of climate change, its genetic diversity is unlikely to be greatly affected.
- Full Text:
- Date Issued: 2014
Aspects of the biology and ecology of the South African abalone Haliotis midae Linnaeus, 1758 (Mollusca Gastropoda) along the eastern Cape and Ciskei coast
- Authors: Wood, A D (Aidan David)
- Date: 1993
- Subjects: Abalones -- South Africa , Abalones -- Ecology , Abalones -- Physiology
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5220 , http://hdl.handle.net/10962/d1005063
- Description: The South African abalone Haliotis midae Linnaeus, 1758, is an important commercial, recreational and aquaculture mollusc species. It is the largest of the six haliotid species found in South African waters and has the second largest distributional range aside from Haliotis spadicea which is widely exploited by rock and surf anglers as bait. Analysis of population structure at Great Fish Point revealed that H. midae exhibited a high degree of microhabitat specificity, and that while dietary habits played a role in habitat selection, it was ultimately the activities of predators which confined size classes to particular niches and restricted all animals to nocturnal activities. Large (> 100 mm SL) exposed animals relied on shell thickness and adhesion to combat predators, while small (> 45 mm SL) sub-boulder animals and medium sized (50 - 95 mm SL) animals relied on their cryptic microhabitats and the protective spine canopies of co-resident urchins (Parechinus angulosus) for daytime protection. Populations of H. midae were discontinuously distributed along the coast, occupying small isolated reefs which offered a suitable array of microhabitats and a good food supply. They mostly inhabited shallow intertidal and subtidal reefs, but were occasionally encountered on deeper subtidal reefs at 4 - 5 meters. Mean length- and width-at-age were determined from growth rings composed of alternate conchiolin (dark) and aragonite (white) bands in the internal nacreous shell layer. Growth was described by the Special Von Bertalanffy growth equation: Lt(mm) = 176.998918 (1 - e⁻°·²⁴²⁴¹⁹⁽t ⁺ °·⁴⁹⁵⁴⁹⁴⁾) Wt(mm) = 159.705689 (1 - e⁻°·¹⁹⁵⁴³⁹⁽t ⁺ °·²¹¹⁶⁾) The ageing technique used was validated for animals from Great Fish Point and Mgwalana using independent tag-return data. The same data provided evidence that growth rates varied between animals from Great Fish Point and Bird Island. The growth data also showed that H. midae exhibited a high degree of individual variation in growth rate. Males and females exhibited similar growth rates. Exposed large animals showed a preference for red seaweeds, in particular Plocamium corallorhiza and Hypnea spicifera, while small sub-boulder cryptic animals included larger proportions of brown (Ralfsia expansa) and green (VIva spp.) algae in their diets. Exposed individuals also exhibited a higher degree of selectivity towards prey items, but in general, stomach contents reflected the most abundant seaweed types. Both drift and attached algal species were utilized by H. midae which was a nocturnal feeder. Pigments from red algae were incorporated into the shell layers giving the shells a pink or brick red colour. Haliotis midae is a dioecious broadcast spawner. Gonad Bulk Indices in combination with detailed histological examination of gonads showed that individuals were iteroparous, asynchronous spawners and that the breeding season extended from March through to October, although the peak spawning activity was between April and June. Males and females can spawn partially, totally or not at all, with atresia of residual gametes occurring after spawning. There is no resting stage, and gametogenesis is initiated directly after spawning. The structure of the ovary and testis and the process of gametogenesis is typical of haliotid species. AI: 1 sex ratio was observed from all populations studied. Sexual maturity was first attained in the 40 - 59 mm SL size class, although evidence for the smallest size at first spawning was recorded at 54.6 mm SL for females and 69 mm SL for males. Sizes at 50% sexual maturity were 72.5 mm SL (52.8 mm SW) at Great Fish Point, 72.5 mm SL (57.4 mm SW) at Mgwalana, 73.7 mm SL (51.2 mm SW) at Cape Recife, and 73.5 mm SL (53.8 mm SW) at Kelly's Beach. Haliotis midae was typically highly fecund, although a high degree of variation resulting in poor relationships between fecundity/shell length and gonad weight/shell length. The relationship between fecundity and gonad weight was linear. In the Eastern Cape, H. midae possessed a faster growth rate, smaller size at sexual maturity, smaller maximum size and lower longevity when compared to con specifics in Western Cape waters. A smaller minimum legal size of 93 mm SW is proposed for Eastern Cape animals and it is suggested that the closed season be moved to the peak spawning period between April and June. The benefit of a closed season during the spawning period is questioned, and the feasibility of closed areas as a management option for H. midae in the Eastern Cape is discussed.
- Full Text:
- Date Issued: 1993
- Authors: Wood, A D (Aidan David)
- Date: 1993
- Subjects: Abalones -- South Africa , Abalones -- Ecology , Abalones -- Physiology
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5220 , http://hdl.handle.net/10962/d1005063
- Description: The South African abalone Haliotis midae Linnaeus, 1758, is an important commercial, recreational and aquaculture mollusc species. It is the largest of the six haliotid species found in South African waters and has the second largest distributional range aside from Haliotis spadicea which is widely exploited by rock and surf anglers as bait. Analysis of population structure at Great Fish Point revealed that H. midae exhibited a high degree of microhabitat specificity, and that while dietary habits played a role in habitat selection, it was ultimately the activities of predators which confined size classes to particular niches and restricted all animals to nocturnal activities. Large (> 100 mm SL) exposed animals relied on shell thickness and adhesion to combat predators, while small (> 45 mm SL) sub-boulder animals and medium sized (50 - 95 mm SL) animals relied on their cryptic microhabitats and the protective spine canopies of co-resident urchins (Parechinus angulosus) for daytime protection. Populations of H. midae were discontinuously distributed along the coast, occupying small isolated reefs which offered a suitable array of microhabitats and a good food supply. They mostly inhabited shallow intertidal and subtidal reefs, but were occasionally encountered on deeper subtidal reefs at 4 - 5 meters. Mean length- and width-at-age were determined from growth rings composed of alternate conchiolin (dark) and aragonite (white) bands in the internal nacreous shell layer. Growth was described by the Special Von Bertalanffy growth equation: Lt(mm) = 176.998918 (1 - e⁻°·²⁴²⁴¹⁹⁽t ⁺ °·⁴⁹⁵⁴⁹⁴⁾) Wt(mm) = 159.705689 (1 - e⁻°·¹⁹⁵⁴³⁹⁽t ⁺ °·²¹¹⁶⁾) The ageing technique used was validated for animals from Great Fish Point and Mgwalana using independent tag-return data. The same data provided evidence that growth rates varied between animals from Great Fish Point and Bird Island. The growth data also showed that H. midae exhibited a high degree of individual variation in growth rate. Males and females exhibited similar growth rates. Exposed large animals showed a preference for red seaweeds, in particular Plocamium corallorhiza and Hypnea spicifera, while small sub-boulder cryptic animals included larger proportions of brown (Ralfsia expansa) and green (VIva spp.) algae in their diets. Exposed individuals also exhibited a higher degree of selectivity towards prey items, but in general, stomach contents reflected the most abundant seaweed types. Both drift and attached algal species were utilized by H. midae which was a nocturnal feeder. Pigments from red algae were incorporated into the shell layers giving the shells a pink or brick red colour. Haliotis midae is a dioecious broadcast spawner. Gonad Bulk Indices in combination with detailed histological examination of gonads showed that individuals were iteroparous, asynchronous spawners and that the breeding season extended from March through to October, although the peak spawning activity was between April and June. Males and females can spawn partially, totally or not at all, with atresia of residual gametes occurring after spawning. There is no resting stage, and gametogenesis is initiated directly after spawning. The structure of the ovary and testis and the process of gametogenesis is typical of haliotid species. AI: 1 sex ratio was observed from all populations studied. Sexual maturity was first attained in the 40 - 59 mm SL size class, although evidence for the smallest size at first spawning was recorded at 54.6 mm SL for females and 69 mm SL for males. Sizes at 50% sexual maturity were 72.5 mm SL (52.8 mm SW) at Great Fish Point, 72.5 mm SL (57.4 mm SW) at Mgwalana, 73.7 mm SL (51.2 mm SW) at Cape Recife, and 73.5 mm SL (53.8 mm SW) at Kelly's Beach. Haliotis midae was typically highly fecund, although a high degree of variation resulting in poor relationships between fecundity/shell length and gonad weight/shell length. The relationship between fecundity and gonad weight was linear. In the Eastern Cape, H. midae possessed a faster growth rate, smaller size at sexual maturity, smaller maximum size and lower longevity when compared to con specifics in Western Cape waters. A smaller minimum legal size of 93 mm SW is proposed for Eastern Cape animals and it is suggested that the closed season be moved to the peak spawning period between April and June. The benefit of a closed season during the spawning period is questioned, and the feasibility of closed areas as a management option for H. midae in the Eastern Cape is discussed.
- Full Text:
- Date Issued: 1993
The effect of diet and age-at-weaning on growth and survival of clownfish Amphiprion percula (Pisces : Pomacentridae)
- Authors: Gordon, A. K. (Andrew K.)
- Date: 1999
- Subjects: Anemonefishes , Pomacentridae , Fishes -- Growth
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5270 , http://hdl.handle.net/10962/d1005114 , Anemonefishes , Pomacentridae , Fishes -- Growth
- Description: The aim of this study was to improve the rearing of common clownfish Amphiprion percula, by weaning juveniles from a live feed to a formulated feed as early as possible, while still maintaining good growth and survival. The growth response of A. percula to a formulated dry feed was initially investigated. There was no difference in growth rate of juveniles fed a formulated feed, and the formulated feed supplemented with either Artemia or a Donax serra / Penaeus indicus combination. Amphiprion percula readily consumed the formulated feed, and the fishmeal/casein combination appeared an acceptable protein source. As the amount of protein included in a diet can have a profound effect on growth, the optimal dietary protein level for juvenile A. percula was investigated by feeding semipurified diets containing graded levels of protein, ranging from 40-65%. There was no difference in the growth rates of juveniles fed the various diets, however all diets promoted good growth with an average weight gain of 419%, and thus for the purposes of this study the diet formulation was deemed adequate. The histological study of the digestive system of larval A. percula revealed that the alimentary canal was advanced at hatching and that larvae start exogenous feeding immediately. Three days after hatch (DAH) the yolk sac is completely absorbed. In the hind-gut epithelium of 5-day-old larvae small supranuclear inclusion vacuoles appear, suggesting pinocytotic digestion, and by 7 DAH gastric glands are established in the epithelium of the stomach. Nine DAH supranuclear inclusion vacuoles appear in the epithelium of the mid-gut, indicating extracellular digestion and absorption across the lumen. As pinocytotic digestion of protein is less efficient than extracellular digestion, especially in the case of formulated feeds, it was hypothesised that the digestive system of A. percula could only effectively digest formulated feeds 9 DAH onwards. The two weaning experiments designed to test this hypothesis revealed that A. percula was able to utilise the formulated feed, without reduction in survival, from 7 DAH onwards. However, in terms of growth, the optimal time to wean juveniles from the live feed to the formulated dry feed was between 15 to 20 DAH. As A. percula accept a formulated feed and can benefit nutritionally from it, the dependence of larvae and juveniles on live feed can be reduced. This study has shown that the rearing of A. percula can been simplified and improved by weaning from 7 DAH with no reduction in survival, and from 15 to 20 DAH with no reduction in growth.
- Full Text:
- Date Issued: 1999
- Authors: Gordon, A. K. (Andrew K.)
- Date: 1999
- Subjects: Anemonefishes , Pomacentridae , Fishes -- Growth
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5270 , http://hdl.handle.net/10962/d1005114 , Anemonefishes , Pomacentridae , Fishes -- Growth
- Description: The aim of this study was to improve the rearing of common clownfish Amphiprion percula, by weaning juveniles from a live feed to a formulated feed as early as possible, while still maintaining good growth and survival. The growth response of A. percula to a formulated dry feed was initially investigated. There was no difference in growth rate of juveniles fed a formulated feed, and the formulated feed supplemented with either Artemia or a Donax serra / Penaeus indicus combination. Amphiprion percula readily consumed the formulated feed, and the fishmeal/casein combination appeared an acceptable protein source. As the amount of protein included in a diet can have a profound effect on growth, the optimal dietary protein level for juvenile A. percula was investigated by feeding semipurified diets containing graded levels of protein, ranging from 40-65%. There was no difference in the growth rates of juveniles fed the various diets, however all diets promoted good growth with an average weight gain of 419%, and thus for the purposes of this study the diet formulation was deemed adequate. The histological study of the digestive system of larval A. percula revealed that the alimentary canal was advanced at hatching and that larvae start exogenous feeding immediately. Three days after hatch (DAH) the yolk sac is completely absorbed. In the hind-gut epithelium of 5-day-old larvae small supranuclear inclusion vacuoles appear, suggesting pinocytotic digestion, and by 7 DAH gastric glands are established in the epithelium of the stomach. Nine DAH supranuclear inclusion vacuoles appear in the epithelium of the mid-gut, indicating extracellular digestion and absorption across the lumen. As pinocytotic digestion of protein is less efficient than extracellular digestion, especially in the case of formulated feeds, it was hypothesised that the digestive system of A. percula could only effectively digest formulated feeds 9 DAH onwards. The two weaning experiments designed to test this hypothesis revealed that A. percula was able to utilise the formulated feed, without reduction in survival, from 7 DAH onwards. However, in terms of growth, the optimal time to wean juveniles from the live feed to the formulated dry feed was between 15 to 20 DAH. As A. percula accept a formulated feed and can benefit nutritionally from it, the dependence of larvae and juveniles on live feed can be reduced. This study has shown that the rearing of A. percula can been simplified and improved by weaning from 7 DAH with no reduction in survival, and from 15 to 20 DAH with no reduction in growth.
- Full Text:
- Date Issued: 1999